Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A9 F28 I1 R1
|
126 |
206.4 |
6980590 |
99.2% |
6924745 |
138.5 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,626,677 |
A→G |
S256G (AGC→GGC) |
radA → |
DNA recombination protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,626,677 | 0 | A | G | 99.5%
| 686.4
/ NA
| 189 | S256G (AGC→GGC) | radA | DNA recombination protein |
| Reads supporting (aligned to +/- strand): ref base A (1/0); new base G (106/82); total (107/82) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 193 total aligned reads displayed.
CGCGGTGTGGCGATTGTCATGGTGGGGCACGTAACCAAAGATGGTTCGCTGGCTGGCCCGAAAGTGCTGGAACACTGTATCGACTGTTCGGTGCTTTTGGATGGCGATGCCGACTCCCGTTTTCGCACCTTGCGCAGCCATAAAAACCGCTTCGGCGCGGTGAATGAGCTGGGCGTCTTCGCGATGACCGAACAGGGGCTGCGTGAAGTCAGCAACCCTTCGGCAATTTTCTTAAGTCGCGGCGATGAAGTGACCTCCGGTAGCTCAGTGAT > NC_000913/4626542‑4626813
|
cgcgGTGTGGCGATTGTCATGGTGGGGCACGTAACCAAAGATGGTTCGCTGGCTGGCCCGAAAGTGCTGGAACACTGTATCGACTGTTCGGTGCTTTTGGATGGCGATGCCGACTCCCGTTTTCGCACCTTGCGCGGCCa > 1:351808/1‑140 (MQ=255)
ggTGTGGCGATTGTCATGGTGGGGCACGTAACCAAAGATGGTTCGCTGGCTGGCCCGAAAGTGCTGGAACACTGTATCGACTGTTCGGTGCTTTTGGATGGCGATGCCGACTCCCGTTTTCGCACCTTGCGCGGCCATaa > 2:2414794/1‑140 (MQ=255)
gCGATTGTCATGGTGGGGCACGTAACCAAAGATGGTTCGCTGGCTGGCCCGAAAGTGCTGGAACACTGTATCGACTGTTCGGTGCTTTTGGATGGCGATGCCGACTCCCGTTTTCGCACCTTGCGCGGCCATAAAAACCg < 2:1347219/140‑1 (MQ=255)
gTCATGGTGGGGCACGTAACCAAAGATGGTTCGCTGGCTGGCCCGAAAGTGCTGGAACACTGTATCGACTGTTCGGTGCTTTTGGATGGCGATGCCGACTCCCGTTTTCGCACCTTGCGCGGCCATAAAAACCGCTTCgg > 2:1466513/1‑140 (MQ=255)
gTCATGGTGGGGCACGTAACCAAAGATGGTTCGCTGGCTGGCCCGAAAGTGCTGGAACACTGTATCGACTGTTCGGTGCTTTTGGATGGCGATGCCGACTCCCGTTTTCGCACCTTGCGCGGCCATAAAAACCGCTTCgg > 2:2116654/1‑140 (MQ=255)
gTCATGGTGGGGCACGTAACCAAAGATGGTTCGCTGGCTGGCCCGAAAGTGCTGGAACACTGTATCGACTGTTCGGTGCTTTTGGATGGCGATGCCGACTCCCGTTTTCGCACCTTGCGCGGCCATAAAAACCGCTTCgg > 2:1896172/1‑140 (MQ=255)
aTGGTGGGGCACGTAACCAAAGATGGTTCGCTGGCTGGCCCGAAAGTGCTGGAACACTGTATCGACTGTTCGGTGCTTTTGGATGGCGATGCCGACTCCCGTTTTCGCACCTTGCGCGGCCATAAAAACCGCTTCGgcgc < 2:2276986/140‑1 (MQ=255)
aTGGTGGGGCACGTAACCAAAGATGGTTCGCTGGCTGGCCCGAAAGTGCTGGAACACTGTATCGACTGTTCGGTGCTTTTGGATGGCGATGCCGACTCCCGTTTTCGCACCTTGCGCGGCCATAAAAACCGCTTCGgcgc < 2:2170732/140‑1 (MQ=255)
tggGGCACGTAACCAAAGATGGTTCGCTGGCTGGCCCGAAAGTGCTGGAACACTGTATCGACTGTTCGGTGCTTTTGGATGGCGATGCCGACTCCCGTTTTCGCACCTTGCGCGGCCATAAAAACCGCTTCGGCGCGGTg < 1:486572/140‑1 (MQ=255)
ggggCACGTAACCAAAGATGGTTCGCTGGCTGGCCCGAAAGTGTTGGAACACTGTATCGACTGTTCGGTGCTTTTGGATGGCGATGCCGACTCCCGTTTTCGCACCTTGCGCGGCCATAAAAACCGCTTCGGCGCGGTGa > 1:460693/1‑140 (MQ=255)
gCACGTAACCAAAGATGGTTCGCTGGCTGGCCCGAAAGTGCTGGAACACTGTATCGACTGTTCGGTGCTTTTGGATGGCGATGCCGACTCCCGTTTTCGCACCTTGCGCGGCCATAAAAACCGCTTCGGCGCGGTGAATg > 1:587906/1‑140 (MQ=255)
gCACGTAACCAAAGATGGTTCGCTGGCTGGCCCGAAAGTGCTGGAACACTGTATCGACTGTTCGGTGCTTTTGGATGGCGATGCCGACTCCCGTTTTCGCACCTTGCGCGGCCATAAAAACCGCTTCGGCGCGGTGAATg < 1:1788092/140‑1 (MQ=255)
gCACGTAACCAAAGATGGTTCGCTGGCTGGCCCGAAAGTGCTGGAACACTGTATCGACTGTTCGGTGCTTTTGGATGGCGATGCCGACTCCCGTTTTCGCACCTTGCGCGGCCATAAAAACCGCTTCGGCGCGGTGAATg > 2:479090/1‑140 (MQ=255)
tAACCAAAGATGGTTCGCTGGCTGGCCCGAAAGTGCTGGAACACTGTATCGACTGTTCGGTGCTTTTGGATGGCGATGCCGACTCCCGTTTTCGCACCTTGCGCGGCCATAAAAACCGCTTCgg < 1:1865660/124‑1 (MQ=255)
tAACCAAAGATGGTTCGCTGGCTGGCCCGAAAGTGCTGGAACACTGTATCGACTGTTCGGTGCTTTTGGATGGCGATGCCGACTCCCGTTTTCGCACCTTGCGCGGCCATAAAAACCGCTTCgg > 2:1865660/1‑124 (MQ=255)
tAACCAAAGATGGTTCGCTGGCTGGCCCGAAAGTGCTGGAACACTGTATCGACTGTTCGGTGCTTTTGGATGGCGATGCCGACTCCCGTTTTCGCACCTTGCGCGGCCATAAAAACCGCTTCGGCGCGGTGAATGAGCTg > 1:1970124/1‑140 (MQ=255)
aaCCAAAGATGGTTCGCTGGCTGGCCCGAAAGTGCTGGAACACTGTATCGACTGTTCGGTGCTTTTGGATGGCGATGCCGACTCCCGTTTTCGCACCTTGCGCGGCCATAAAAACCGCTTCGGcgcg > 2:379482/1‑127 (MQ=255)
ccAAAGATGGTTCGCTGGCTGGCCCGAAAGTGCTGGAACACTGTATCGACTGTTCGGTGCTTTTGGATGGCGATGCCGACTCCCGTTTTCGCACCTTGCGCGGCCATAAAAACCGCTTCGGCGCGGTGAATGAGCTGGGc > 2:1925734/1‑140 (MQ=255)
ccAAAGATGGTTCGCTGGCTGGCCCGAAAGTGCTGGAACACTGTATCGACTGTTCGGTGCTTTTGGATGGCGATGCCGACTCCCGTTTTCGCACCTTGCGCGGCCATAAAAACCGCTTCGGCGCGGTGAATGAGCTGGGc < 1:2775264/140‑1 (MQ=255)
cAAAGATGGTTCGCTGGCTGGCCCGAAAGTGCTGGAACACTGTATCGACTGTTTGGTGCTTTTGGATGGCGATGCCGACTCCCGTTTTCGCACCTTGCGCGGCCATAAAAACCGCTTCGgcgc > 2:304653/1‑123 (MQ=255)
aaGATGGTTCGCTGGCTGGCCCGAAAGTGCTGGAACACTGTATCGACTGTTCGGTGCTTTTGGATGGCGATGCCGACTCCCGTTTTCGCACCTTGCGCGGCCATAAAAACCGCTTCGGCGCGGTGAATGAGCTGGGCGTc > 1:2017453/1‑140 (MQ=255)
aaGATGGTTCGCTGGCTGGCCCGAAAGTGCTGGAACACTGTATCGACTGTTCGGTGCTTTTGGATGGCGATGCCGACTCCCGTTTTCGCACCTTGCGCGGCCATAAAAACCGCTTCGGCGCGGTGAATGAGCTGGGCGTc < 2:281249/140‑1 (MQ=255)
aGATGGTTCGCTGGCTGGCCCGAAAGTGCTGGAACACTGTATCGACTGTTCGGTGCTTTTGGATGGCGATGCCGACTCCCGTTTTCGCACCTTGCGCGGCCATAAAAACCGCTTCGGCGCGGTGAATGAGCTGGGCGTCt > 2:2067326/1‑140 (MQ=255)
aTGGTTCGCTGGCTGGCCCGAAAGTGCTGGAACACTGTATCGACTGTTCGGTGCTTTTGGATGGCGATGCCGACTCCCGTTTTCGCACCTTGCGCGGCCATAAAAACCGCTTCGGCGCGGTGAATGAGCTGGGCGTCTTc > 1:1538118/1‑140 (MQ=255)
aTGGTTCGCTGGCTGGCCCGAAAGTGCTGGAACACTGTATCGACTGTTCGGTGCTTTTGGATGGCGATGCCGACTCCCGTTTTCGCACCTTGCGCGGCCATAAAAACCGCTTCGGCGCGGTGAATGAGCTGGGCGTCTTc > 1:24522/1‑140 (MQ=255)
ggTTCGCTGGCTGGCCCGAAAGTGCTGGAACACTGTATCGACTGTTCGGTGCTTTTGGATGGCGATGCCGCCTCCCGTTTTCGCACCTTGCGCGGCCATAAAAACCGCTTCGGCGCGGTGAATGAGCTGGGCGTCTTcgc > 2:602938/1‑140 (MQ=255)
gTTCGCTGGCTGGCCCGAAAGTGCTGGAACACTGTATCGACTGTTCGGTGCTTTTGGATGGCGATGCCGCCTCCCGTTTTCGCACCTTGCGCGGCCATAAAAACCGCTTCGGCGCGGTGAATGAGCTGGGCGTCTTcgcg < 1:602938/140‑1 (MQ=255)
gTTCGCTGGCTGGCCCGAAAGTGCTGGAACACTGTATCGACTGTTCGGTGCTTTTGGATGGCGATGCCGACTCCCGTTTTCGCACCTTGCGCGGCCATAAAAACCGCTTCGGCGCGGTGAATGAGCTGGGCGTCTTcgcg < 1:324933/140‑1 (MQ=255)
ttCGCTGGCTGGCCCGAAAGTGCTGGAACACTGTATCGACTGTTCGGTGCTTTTGGATGGCGATGCCGACTCCCGTTTTCGCACCTTGCGCGGCCATAAAAACCGCTTCGGCGCGGTGAATGAGCTGGGCGTCTTCGCGa > 2:3257520/1‑140 (MQ=255)
ttCGCTGGCTGGCCCGAAAGTGCTGGAACACTGTATCGACTGTTCGGTGCTTTTGGATGGCGATGCCGACTCCCGTTTTCGCACCTTGCGCGGCCATAAAAACCGCTTCGGCGCGGTGAATGAGCTGGGCGTCTTCGCGa > 2:2605807/1‑140 (MQ=255)
ttCGCTGGCTGGCCCGAAAGTGCTGGAACACTGTATCGACTGTTCGGTGCTTTTGGATGGCGATGCCGACTCCCGTTTTCGCACCTTGCGCGGCCATAAAAACCGCTTCGGCGCGGTGAATGAGCTGGGCGTCTTCGCGa > 2:3152264/1‑140 (MQ=255)
ttCGCTGGCTGGCCCGAAAGTGCTGGAACACTGTATCGACTGTTCGGTGCTTTTGGATGGCGATGCCGACTCCCGTTTTCGCACCTTGCGCGGCCATAAAAACCGCTTCGGCGCGGTGAATGAGCTGGGCGTCTTCGCGa > 1:1059966/1‑140 (MQ=255)
ctggctggCCCGAAAGTGCTGGAACACTGTATCGACTGTTCGGTGCTTTTGGATGGCGATGCCGACTCCCGTTTTCGCACCTTGCGCGGCCATAAAAACCGCTTCGGCGCGGTGAATGAGCTGGGCGTCTTCGCGATGAc < 2:1761465/140‑1 (MQ=255)
tggctggcCCGAAAGTGCTGGAACACTGTATCGACTGTTCGGTGCTTTTGGATGGCGATGCCGACTCCCGTTTTCGCACCTTGCGCGGCCATAAAAACCGCTTCGGCGCGGTGAATGAGCTGGGCGTCTTCGCGATGAcc > 2:2383941/1‑140 (MQ=255)
tggctggcCCGAAAGTGCTGGAACACTGTATCGACTGTTCGGTGCTTTTGGATGGCGATGCCGACTCCCGTTTTCGCACCTTGCGCGGCCATAAAAACCGCTTCGGCGCGGTGAATGAGCTGGGCGTCTTCGCGATGAcc > 1:3145606/1‑140 (MQ=255)
cccGAAAGTGCTGGAACACTGTATCGACTGTTCGGTGCTTTTGGATGGCGATGCCGACTCCCGTTTTCGCACCTTGCGCGGCCATAAAAACCGCTTCGGCGCGGTGAATGAGCTGGGCGTCTTCGCGATGACCGAACAgg > 1:2975473/1‑140 (MQ=255)
cccGAAAGTGCTGGAACACTGTATCGACTGTTCGGTGCTTTTGGATGGCGATGCCGACTCCCGTTTTCGCACCTTGCGCGGCCATAAAAACCGCTTCGGCGCGGTGAATGAGCTGGGCGTCTTCGCGATGACCGAACAgg > 2:2288415/1‑140 (MQ=255)
ccGAAAGTGCTGGAACACTGTATCGACTGTTCGGTGCTTTTGGATGGCGATGCCGACTCCCGTTTTCGCACCTTGCGCGGCCATAAAAACCGCTTCGGCGCGGTGAATGAGCTGGGCGTCTTCGCGATGACCGAACAggg < 2:3099131/140‑1 (MQ=255)
gCTGGAACACTGTATCGACTGTTCGGTGCTTTTGGATGGCGATGCCGACTCCCGTTTTCGCACCTTGCGCGGCCATAAAAACCGCTTCGGCGCGGTGAATGAGCTGGGCGTCTTCGCGATGACCGAACAGGGGCTGCGTg < 2:2108306/140‑1 (MQ=255)
cTGGAACACTGTATCGACTGTTCGGTGCTTTTGGATGGCGATGCCGACTCCCGTTTTCGCACCTTGCGCGGCCATAAAAACCGCTTCGGCGCGGTGAATGAGCTGGGCGTCTTCGCGATGACCGAACAGGGGCTGCGTGa < 1:2471148/140‑1 (MQ=255)
cTGGAACACTGTATCGACTGTTCGGTGCTTTTGGATGGCGATGCCGACTCCCGTTTTCGCACCTTGCGCGGCCATAAAAACCGCTTCGGCGCGGTGAATGAGCTGGGCGTCTTCGCGATGACCGAACAGGGGCTGCGTGa > 1:2109324/1‑140 (MQ=255)
tgaaaCACTGTATCGATTGTTCGGTGCTTTTGGAGGGCGATGCCGACTCCCGTTTCCGCACCTTGCGCGGCCATAAAAACCGCTTCGGCGCGGTGAATGAGCTGGGCGTCTTCGCGATGACCGAACAGGGGCTGCGTGaa < 2:1538118/137‑1 (MQ=255)
tGGAACACTGTATCGACTGTTCGGTGCTTTTGGATGGCGATGCCGACTCCCGTTTTCGCACCTTGCGCGGCCATAAAAACCGCTTCGGCGCGGTGAATGAGCTGGGCGTCTTCGCGATGACCGAACAGGGGCTGCGTGaa < 1:1896172/140‑1 (MQ=255)
tCGACTGTTCGGTGCTTTTGGATGGCGATGCCGACTCCCGTTTTCGCACCTTGCGCGGCCATAAAAACCGCTTCGGCGCGGTGAATGAGCTGGGCGTCTTCGCGATGACCGAACAGGGGCTGCGTGAAGTCAGCAACCCt < 2:789605/140‑1 (MQ=255)
cGACTGTTCGGTGCTTTTGGATGGTGATGCCGACTCCCGTTTTCGCACCTTGCGCGGCCATAAAAACCGCTTCGGCGCGGTGAATGAGCTGGGCGTCTTCGCGATGACCGAACAGGGGCTGCGTGAAGTCAGCAACCCtt < 1:2183124/140‑1 (MQ=255)
aCTGTTCGGTGCTTTTGGATGGCGATGCCGACTCCCGTTTTCGCACCTTGCGCGGCCATAAAAACCGCTTCGGCGCGGTGAATGAGCTGGGCGTCTTCGCGATGACCGAACAGGGGCTGCGTGAAGTCAGCAACCCTTCg > 2:347530/1‑140 (MQ=255)
cTGTTCGGTGCTTTTGGATGGCGATGCCGACTCCCGTTTTCGCACCTTGCGCGGCCATAAAAACCGCTTCGGCGCGGTGAATGAGCTGGGCGTCTTCGCGATGACCGAACAGGGGCTGCGTGAAGTCAGCAACCCTTCgg < 1:2611207/140‑1 (MQ=255)
cTGTTCGGTGCTTTTGGATGGCGATGCCGACTCCCGTTTTCGCACCTTGCGCGGCCATAAAAACCGCTTCGGCGCGGTGAATGAGCTGGGCGTCTTCGCGATGACCGAACAGGGGCTGCGTGAAGTCAGCAACCCTTCgg > 1:2545806/1‑140 (MQ=255)
cTGTTCGGTGCTTTTGGATGGCGATGCCGACTCCCGTTTTCGCACCTTGCGCGGCCATAAAAACCGCTTCGGCGCGGTGAATGAGCTGGGCGTCTTCGCGATGACCGAACAGGGGCTGCGTGAAGTCAGCAACCCTTCgg < 2:3180666/140‑1 (MQ=255)
tGTTCGGTGCTTTTGGATGGCGATGCCGACTCCCGTTTTCGCACCTTGCGCGGCCATAAAAACCGCTTCGGCGCGGTGAATGAGCTGGGCGTCTTCGCGATGACCGAACAGGGGCTGCGTGAAGTCAGCAACCCTTCGGc > 1:1212765/1‑140 (MQ=255)
gTTCGGTGCTTTTGGATGGCGATGCCGACTCCCGTTTTCGCACCTTGCGCGGCCATAAAAACCGCTTCGGCGCGGTGAATGAGCTGGGCGTCTTCGCGATGACCGAACAGGGGCTGCGTGAAGTCAGCAACCCTTCGGCa > 1:1330539/1‑140 (MQ=255)
gTTCGGTGCTTTTGGATGGCGATGCCGACTCCCGTTTTCGCACCTTGCGCGGCCATAAAAACCGCTTCGGCGCGGTGAATGAGCTGGGCGTCTTCGCGATGACCGAACAGGGGCTGCGTGAAGTCAGCAACCCTTCGGCa > 1:113411/1‑140 (MQ=255)
gTTCGGTGCTTTTGGATGGCGATGCCGACTCCCGTTTTCGCACCTTGCGCGGCCATAAAAACCGCTTCGGCGCGGTGAATGAGCTGGGCGTCTTCGCGATGACCGAACAGGGGCTGCGTGAAGTCAGCAACCCTTCGGCa > 2:2673259/1‑140 (MQ=255)
gTTCGGTGCTTTTGGATGGCGATGCCGACTCCCGTTTTCGCACCTTGCGCGGCCATAAAAACCGCTTCGGCGCGGTGAATGAGCTGGGCGTCTTCGCGATGACCGAACAGGGGCTGCGTGAAGTCAGCAACCCTTCGGCa > 1:762310/1‑140 (MQ=255)
gTTCGGTGCTTTTGGATGGCGATGCCGACTCCCATTTTCGCACCTTGCGCGGCCATAAAAACCGCTTCGGCGCGGTGAATGAGCTGGGCGTCTTCGCGATGACCGAACAGGGGCTGCGTGaa > 2:495794/1‑122 (MQ=255)
tCGGTGCTTTTGGATGGCGATGCCGACTCCCGTTTTCGCACCTTGCGCGGCCATAAAAACCGCTTCGGCGCGGTGAATGAGCTGGGCGTCTTCGCGATGACCGAACAGGGGCTGCGTGAAGTCAGCAACCCTTCGGCAAt > 2:1556666/1‑140 (MQ=255)
tCGGTGCTTTTGGATGGCGATGCCGACTCCCGTTTTCGCACCTTGCGCGGCCATAAAAACCGCTTCGGCGCGGTGAATGAGCTGGGCGTCTTCGCGATGACCGAACAGGGGCTGCGTGAAGTCAGCAACCCTTCGGCAAt > 1:719941/1‑140 (MQ=255)
tCGGTGCTTTTGGATGGCGATGCCGACTCCCGTTTTCGCACCTTGCGCGGCCATAAAAACCGCTTCGGCGCGGTGAATGAGCTGGGCGTCTTCGCGATGACCGAACAGGGGCTGCGTGAAGTCAGCAACCCTTCGGCAAt > 1:115254/1‑140 (MQ=255)
tGCTTTTGGATGGCGATGCCGACTCCCGTTTTCGCACCTTGCGCGGCCATAAAAACCGCTTCGGCGCGGTGAATGAGCTGGGCGTCTTCGCGATGACCGAACAGGGGCTGCGTGAAGTCAGCAACCCTTCGGCAATTTTc > 1:2899960/1‑140 (MQ=255)
cTTTTGGATGGCGATGCCGACTCCCGTTTTCGCACCTTGCGCGGCCATAAAAACCGCTTCGGCGCGGTGAATGAGCTGGGCGTCTTCGCGATGACCGAACAGGGGCTGCGTGAAGTCAGCAACCCTTCGGCAATTTTCtt > 1:1434362/1‑140 (MQ=255)
ttGGATGGCGATGCCGACTCCCGTTTTCGCACCTTGCGCGGCCATAAAAACCGCTTCGGCGCGGTGAATGAGCTGGGCGTCTTCGCGATGACCGAACAGGGGCTGCGTGAAGTCAGCAACCCTTCGGCaa < 2:1382305/130‑1 (MQ=255)
ttGGATGGCGATGCCGACTCCCGTTTTCGCACCTTGCGCGGCCATAAAAACCGCTTCGGCGCGGTGAATGAGCTGGGCGTCTTCGCGATGACCGAACAGGGGCTGCGTGAAGTCAGCAACCCTTCGGCaa > 1:1382305/1‑130 (MQ=255)
ttGGATGGCGATGCCGACTCCCGTTTTCGCACCTTGCGCGGCCATAAAAACCGCTTCGGCGCGGTGAATGAGCTGGGCGTCTTCGCGATGACCGAACAGGGGCTGCGTGAAGTCAGCAACCCTTCGGCAATTTTCTTAAg > 1:3272553/1‑140 (MQ=255)
ttGGATGGCGATGCCGACTCCCGTTTTCGCACCTTGCGCGGCCATAAAAACCGCTTCGGCGCGGTGAATGAGCTGGGCGTCTTCGCGATGACCGAACAGGGGCTGCGTGAAGTCAGCAACCCTTCGGCAATTTTCTTAAg > 2:2631118/1‑140 (MQ=255)
tGGATGGCGATGCCGACTCCCGTTTTCGCACCTTGCGCGGCCATAAAAACCGCTTCGGCGCGGTGAATGAGCTGGGCGTCTTCGCGATGACCGAACAGGGGCTGCGTGAAGTCAGCAACCCTTCGGCAATTTTCTTAAGt < 1:1512684/140‑1 (MQ=255)
tGGATGGCGATGCCGACTCCCGTTTTCGCACCTTGCGCGGCCATAAAAACCGCTTCGGCGCGGTGAATGAGCTGGGCGTCTTCGCGATGACCGAACAGGGGCTGCGTGAAGTCAGCAACCCTTCGGCAATTTTCTTAAGt < 1:2107955/140‑1 (MQ=255)
tGGATGGCGATGCCGACTCCCGTTTTCGCACCTTGCGCGGCCATAAAAACCGCTTCGGCGCGGTGAATGAGCTGGGCGTCTTCGCGATGACCGAACAGGGGCTGCGTGAAGTCAGCAACCCTTCGGCAATTTTCTTAAGt < 2:1296253/140‑1 (MQ=255)
tGGATGGCGATGCCGACTCCCGTTTTCGCACCTTGCGCGGCCATAAAAACCGCTTCGGCGCGGTGAATGAGCTGGGCGTCTTCGCGATGACCGAACAGGGGCTGCGTGAAGTCAGCAACCCTTCGGCAATTTTCTTAAGt < 2:460693/140‑1 (MQ=255)
cGATGCCGACTCCCGTTTTCGCACCTTGCGCGGCCATAAAAACCGCTTCGGCGCGGTGAATGAGCTGGGCGTCTTCGCGATGACCGAACAGGGGCTGCGTGAAGTCAGCAACCCTTCGGCAATTTTCTTAAGTCgcggcg < 2:2545806/140‑1 (MQ=255)
cGATGCCGACTCCCGTTTTCGCACCTTGCGCGGCCATAAAAACCGCTTCGGCGCGGTGAATGAGCTGGGCGTCTTCGCGATGACCGAACAGGGGCTGCGTGAAGTCAGCAACCCTTCGGCAATTTTCTTAAGTCgcggcg > 2:2501404/1‑140 (MQ=255)
cGATGCCGACTCCCGTTTTCGCACCTTGCGCGGCCATAAAAACCGCTTCGGCGCGGTGAATGAGCTGGGCGTCTTCGCGATGACCGAACAGGGGCTGCGTGAAGTCAGCAACCCTTCGGCAATTTTCTTAAGTCgcggcg > 1:3050471/1‑140 (MQ=255)
cGATGCCGACTCCCGTTTTCGCACCTTGCGCGGCCATAAAAACCGCTTCGGCGCGGTGAATGAGCTGGGCGTCTTCGCGATGACCGAACAGGGGCTGCGTGAAGTCAGCAACCCTTCGGCAATTTTCTTAAGTCgcggcg < 1:2654033/140‑1 (MQ=255)
cGATGCCGACTCCCGTTTTCGCACCTTGCGCGGCCATAAAAACCGCTTCGGCGCGGTGAATGAGCTGGGCGTCTTCGCGATGACCGAACAGGGGCTGCGTGAAGTCAGCAACCCTTCGGCAATTTTCTTAAGTCgcggcg > 1:409785/1‑140 (MQ=255)
cGATGCCGACTCCCGTTTTCGCACCTTGCGCGGCCATAAAAACCGCTTCGGCGCGGTGAATGAGCTGGGCGTCTTCGCGATGACCGAACAGGGGCTGCGTGAAGTCAGCAACCCTTCGGCAATTTTCTTAAGTCgcggcg > 2:620397/1‑140 (MQ=255)
cGATGCCGACTCCCGTTTTCGCACCTTGCGCGGCCATAAAAACCGCTTCGGCGCGGTGAATGAGCTGGGCGTCTTCGCGATGACCGAACAGGGGCTGCGTGAAGTCAGCAACCCTTCGGCAATTTTCTTAAGTCgcggcg < 1:2078549/140‑1 (MQ=255)
cGATGCCGACTCCCGTTTTCGCACCTTGCGCGGCCATAAAAACCGCTTCGGCGCGGTGAATGAGCTGGGCGTCTTCGCGATGACCGAACAGGGGCTGCGTGAAGTCAGCAACCCTTCGGCAATTTTCTTAAGTCgcggcg < 2:113411/140‑1 (MQ=255)
aTGCCGACTCCCGTTTTCGCACCTTGCGCGGCCATAAAAACCGCTTCGGCGCGGTGAATGAGCTGGGCGTCTTCGCGATGACCGAACAGGGGCTGCGTGAAGTCAGCAACCCTTCGGCAATTTTCTTAAGTCGCGGCGAt > 2:673592/1‑140 (MQ=255)
cGACTCCCGTTTTCGCACCTTGCGCGGCCATAAAAACCGCTTCGGCGCGGTGAATGAGCTGGGCGTCTTCGCGATGACCGAACAGGGGCTGCGTGAAGTCAGCAACCCTTCGGCAATTTTCTTAAGTCGCGGCGATGAAg < 1:2402954/140‑1 (MQ=255)
cGACTCCCGTTTTCGCACCTTGCGCGGCCATAAAAACCGCTTCGGCGCGGTGAATGAGCTGGGCGTCTTCGCGATGACCGAACAGGGGCTGCGTGAAGTCAGCAACCCTTCGGCAATTTTCTTAAGTCGCGGCGATGAAg < 1:2673259/140‑1 (MQ=255)
cTCCCGTTTTCGCACCTTGCGCGGCCATAAAAACCGCTTCGGCGCGGTGAATGAGCTGGGCGTCTTCGCGATGACCGAACAGGGGCTGCGTGAAGTCAGCAACCCTTCGGCAATTTTCTTAAGTCGCGGCGATGAAGTGa > 2:2892510/1‑140 (MQ=255)
tCCCGTTTTCGCACCTTGCGCGGCCATAAAAACCGCTTCGGCGCGGTGAATGAGCTGGGCGTCTTCGCGATGACCGAACAGGGGCTGCGTGAAGTCAGCAACCCTTCGGCAATTTTCTTAAGTCGCGGCGATGAAGTGAc > 2:2731158/1‑140 (MQ=255)
cccGTTTTCGCACCTTGCGCGGCCATAAAAACCGCTTCGGCGCGGTGAATGAGCTGGGCGTCTTCGCGATGACCGAACAGGGGCTGCGTGAAGTCAGCAACCCTTCGGCAATTTTCTTAAGTCGCGGCGATGAAGTGAcc < 2:2249333/140‑1 (MQ=255)
ttttCGCACCTTGCGCGGCCATAAAAACCGCTTCGGCGCGGTGAATGAGCTGGGCGTCTTCGCGATGACCGAACAGGGGCTGCGTGAAGTCAGCAACCCTTCGGCAATTTTCTTAAGTCGCGGCGATGAAGTGACCTCCg > 2:1672094/1‑140 (MQ=255)
ttttCGCACCTTGCGCGGCCATAAAAACCGCTTCGGCGCGGTGAATGAGCTGGGCGTCTTCGCGATGACCGAACAGGGGCTGCGTGAAGTCAGCAACCCTTCGGCAATTTTCTTAAGTCGCGGCGATGAAGTGACCTCCg < 2:1812124/140‑1 (MQ=255)
ttttCGCACCTTGCGCGGCCATAAAAACCGCTTCGGCGCGGTGAATGAGCTGGGCGTCTTCGCGATGACCGAACAGGGGCTGCGTGAAGTCAGCAACCCTTCGGCAATTTTCTTAAGTCGCGGCGATGAAGTGACCTCCg < 1:3007860/140‑1 (MQ=255)
tttCGCACCTTGCGCGGCCATAAAAACCGCTTCGGCGCGGTGAATGAGCTGGGCGTCTTCGCGATGACCGAACAGGGGCTGCGTGAAGTCAGCAACCCTTCGGCAATTTTCTTAAGTCGCGGCGATGAAGTGGCCTCCgg < 2:2096175/140‑1 (MQ=255)
tttCGCACCTTGCGCGGCCATAAAAACCGCTTCGGCGCGGTGAATGAGCTGGGCGTCTTCGCGATGACCGAACAGGGGCTGCGTGAAGTCAGCAACCCTTCGGCAATTTTCTTAAGTCGCGGCGATGAAGTGACCTCCgg < 1:2116991/140‑1 (MQ=255)
gCACCTTGCGCGGCCATAAAAACCGCTTCGGCGCGGTGAATGAGCTGGGCGTCTTCGCGATGACCGAACAGGGGCTGCGTGAAGTCAGCAACCCTTCGGCAATTTTCTTAAGTCGCGGCGATGAAGTGACCTCCGGTAGc < 2:1059966/140‑1 (MQ=255)
gCACCTTGCGCGGCCATAAAAACCGCTTCGGCGCGGTGAATGAGCTGGGCGTCTTCGCGATGACCGAACAGGGGCTGCGTGAAGTCAGCAACCCTTCGGCAATTTTCTTAAGTCGCGGCGATGAAGTGACCTCCGGTAGc > 1:3108296/1‑140 (MQ=255)
aCCTTGCGCGGCCATAAAAACCGCTTCGGCGCGGTGAATGAGCTGGGCGTCTTCGCGATGACCGAACAGGGGCTGCGTGAAGTCAGCAACCCTTCGGCAATTTTCTTAAGTCGCGGCGATGAAGTGACCTCCGGTAGCTc > 1:2838946/1‑140 (MQ=255)
aCCTTGCGCGGCCATAAAAACCGCTTCGGCGCGGTGAATGAGCTGGGCGTCTTCGCGATGACCGAACAGGGGCTGCGTGAAGTCAGCAACCCTTCGGCAATTTTCTTAAGTCGCGGCGATGAAGTGACCTCCGGTAGCTc > 1:122470/1‑140 (MQ=255)
ccTTGCGCGGCCATAAAAACCGCTTCGGCGCGGTGAATGAGCTGGGCGTCTTCGCGATGACCGAACAGGGGCTGCGTGAAGTCAGCAACCCTTCGGCAATTTTCTTAAGTCGCGGCGATGAAGTGACCTCCGGTAGCTCa < 2:3108296/140‑1 (MQ=255)
ccTTGCGCGGCCATAAAAACCGCTTCGGCGCGGTGAATGAGCTGGGCGTCTTCGCGATGACCGAACAGGGGCTGCGTGAAGTCAGCAACCCTTCGGCAATTTTCTTAAGTCGCGGCGATGAAGTGACCTCCGGTAGCTCa < 2:889929/140‑1 (MQ=255)
tGCGCGGCCATAAAAACCGCTTCGGCGCGGTGAATGAGCTGGGCGTCTTCGCGATGACCGAACAGGGGCTGCGTGAAGTCAGCAACCCTTCGGCAATTTTCTTAAGTCGCGGCGATGAAGTGACCTCCGGTAGCTCAGTg > 2:2008459/1‑140 (MQ=255)
tGCGCGGCCATAAAAACCGCTTCGGCGCGGTGAATGAGCTGGGCGTCTTCGCGATGACCGAACAGGGGCTGCGTGAAGTCAGCAACCCTTCGGCAATTTTCTTAAGTCGCGGCGATGAAGTGACCTCCGGTAGCTCAGTg > 2:1513886/1‑140 (MQ=255)
tGCGCGGCCATAAAAACCGCTTCGGCGCGGTGAATGAGCTGGGCGTCTTCGCGATGACCGAACAGGGGCTGCGTGAAGTCAGCAACCCTTCGGCAATTTTCTTAAGTCGCGGCGATGAAGTGACCTCCGGTAGCTCAGTg > 1:1014742/1‑140 (MQ=255)
tGCGCGGCCATAAAAACCGCTTCGGCGCGGTGAATGAGCTGGGCGTCTTCGCGATGACCGAACAGGGGCTGCGTGAAGTCAGCAACCCTTCGGCAATTTTCTTAAGTCGCGGCGATGAAGTGACCTCCGGTAGCTCAGTg > 1:2597227/1‑140 (MQ=255)
cgcgGCCATAAAAACCGCTTCGGCGCGGTGAATGAGCTGGGCGTCTTCGCGATGACCGAACAGGGGCTGCGTGAAGTCAGCAACCCTTCGGCAATTTTCTTAAGTCGCGGCGATGAAGTGACCTCCGGTGGCTCAGTGAt < 1:3157437/140‑1 (MQ=255)
cgcgGCCATAAAAACCGCTTCGGCGCGGTGAATGAGCTGGGCGTCTTCGCGATGACCGAACAGGGGCTGCGTGAAGTCAGCAACCCTTCGGCAATTTTCTTAAGTCGCGGCGATGAAGTGACCTCCGGTAGCTCAGTGAt < 1:2288415/140‑1 (MQ=255)
cgcgGCCATAAAAACCGCTTCGACGCGGTGAATGAGCTGGGCGTCTTCGCGATGACCGAACAGGGGCTGCGTGAAGTCAGCAACCCTTCGGCAATTTTCTTAAGTCGCGGCGATGAAGTGACCTCCGGTAGCTCAGTGAt < 1:834882/140‑1 (MQ=255)
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CGCGGTGTGGCGATTGTCATGGTGGGGCACGTAACCAAAGATGGTTCGCTGGCTGGCCCGAAAGTGCTGGAACACTGTATCGACTGTTCGGTGCTTTTGGATGGCGATGCCGACTCCCGTTTTCGCACCTTGCGCAGCCATAAAAACCGCTTCGGCGCGGTGAATGAGCTGGGCGTCTTCGCGATGACCGAACAGGGGCTGCGTGAAGTCAGCAACCCTTCGGCAATTTTCTTAAGTCGCGGCGATGAAGTGACCTCCGGTAGCTCAGTGAT > NC_000913/4626542‑4626813
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
