Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A15 F73 I1 R1
|
29 |
140.0 |
4785556 |
99.3% |
4752057 |
139.2 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,552,043 |
C→A |
F136L (TTC→TTA) |
uxuA → |
D‑mannonate dehydratase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,552,043 | 0 | C | A | 100.0%
| 403.4
/ NA
| 115 | F136L (TTC→TTA) | uxuA | D‑mannonate dehydratase |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base A (55/60); total (55/60) |
Only 100 of 116 total aligned reads displayed.
AACCTGGCGCAGTGTGGCATTCGCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGACGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGCCCAGGCGCGGAAGCGGATTACACCGAAGAAGAAATTGCTCAGGCAGCTGAACGCTTCGCCACTATGAGCGATGAAGACAAAGCGCGTCTGACCCGTAACATCATTGCTGGTC > NC_000913/4551906‑4552176
|
aaCCTGGCGCAGTGTGGCATTCGCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGACGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTAGa < 1:1258124/140‑1 (MQ=255)
ccTGGCGCAGTGTGGCATTCGCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGACGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTAGaaa > 2:1645088/1‑140 (MQ=255)
ccTGGCGCAGTGTGGCATTCGCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGACGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTAGaaa > 1:897321/1‑140 (MQ=255)
ccTGGCGCAGTGTGGCATTCGCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGACGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTAGa > 2:706330/1‑138 (MQ=255)
ggCGCAGTGTGGCATTCGCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGACGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTAGAAATGc < 2:1837160/140‑1 (MQ=255)
ggCGCAGTGTGGCATTCGCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGACGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTAGAAATGc > 2:1042739/1‑140 (MQ=255)
cgcAGTGTGGCATTCGCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGACGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTAGAAATGc < 1:2009180/138‑1 (MQ=255)
cgcAGTGTGGCATTCGCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGACGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTAGAAATGCat > 2:924419/1‑140 (MQ=255)
aGTGTGGCATTCGCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGACGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTAGAAATGCATATc < 1:876903/140‑1 (MQ=255)
aGTGTGGCATTCGCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGACGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTAGAAATGCATATc > 1:1405035/1‑140 (MQ=255)
tgtgGCATTCGCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGACGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTAGAAATGc > 1:801332/1‑133 (MQ=255)
tgtgGCATTCGCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGACGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTAGAAATGCATATCCt > 1:738174/1‑140 (MQ=255)
tgtgGCATTCGCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGACGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTAGAAATGCATATCCt > 1:62978/1‑140 (MQ=255)
tgtgGCATTCGCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGACGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTAGAAATGCATATCCt > 1:880596/1‑140 (MQ=255)
tgtgGCATTCGCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGACGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTAGAAATGCATATCCt > 1:390033/1‑140 (MQ=255)
tgtgGCATTCGCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGACGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTAGAAATGCATATCCt > 2:1760842/1‑140 (MQ=255)
tgtgGCATTCGCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGACGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTAGAAATGCATATCCt > 2:34649/1‑140 (MQ=255)
ggCATTCGCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGACGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTAGAAATGCATATCCTGaa < 2:7907/140‑1 (MQ=255)
gCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGACGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTAGAAATGCATATCCTGAAACGCCCa > 1:797365/1‑140 (MQ=255)
gCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGACGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTAGAAATGCATATCCTGAAACGCCCa > 1:2102356/1‑140 (MQ=255)
aCCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGACGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTAGAAATGCATATCCTGAAACGCCCAgg < 1:1062423/140‑1 (MQ=255)
cGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGACGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTAGAAATGCATATCCTGAAACGCCCAGgcg < 1:1884126/140‑1 (MQ=255)
tgtgCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGACGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTAGAAATGCATATCCTGAAACGCCCAGGcgcg < 1:2235628/140‑1 (MQ=255)
gtgCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGACGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTAGAAATGCATATCCTGAAACGCCCAGGCGCgg < 2:1074601/140‑1 (MQ=255)
gtgCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGACGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTAGAAATGCATATCCTGAAACGCCCAGGCGCgg < 2:62978/140‑1 (MQ=255)
gCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGACGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTAGAAATGCATATCCTGAAACGCCCAGGCGCGGaa < 1:715080/140‑1 (MQ=255)
gCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGACGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTAGAAATGCATATCCTGAAACGCCCAGGCGCGGaa < 1:652310/140‑1 (MQ=255)
gCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGACGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTAGAAATGCATATCCTGAAACGCCCAGGCGCGGaa < 1:2364571/140‑1 (MQ=255)
gCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGACGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTAGAAATGCATATCCTGAAACGCCCAGGCGCGGaa < 1:369999/140‑1 (MQ=255)
gCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGACGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTAGAAATGCATATCCTGAAACGCCCAGGCGCGGaa < 2:797365/140‑1 (MQ=255)
aaCTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGACGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTAGAAATGCATATCCTGAAACGCCCAGGCGCGGAAGCGGa < 2:897321/140‑1 (MQ=255)
cTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGACGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTAGAAATGCATATCCTGAAACGCCCAGGCGCGGAAGCGGAtt > 1:343501/1‑140 (MQ=255)
ttCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGACGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTAGAAATGCATATCCTGAAACGCCCAGGCGCGGAAGCGGATTa < 2:2115229/140‑1 (MQ=255)
cATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGACGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTAGAAATGCATATCCTGAAACGCCCAGGCGCGGAAGCGGATTaca > 2:280978/1‑140 (MQ=255)
tGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGACGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTAGAAATGCATATCCTGAAACGCCCAGgc < 1:1581812/122‑1 (MQ=255)
tGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGACGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTAGAAATGCATATCCTGAAACGCCCAGgc > 2:1581812/1‑122 (MQ=255)
tGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGACGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTAGAAATGCATATCCTGAAACGCCCAGGCGCGGAAGCGGATTACAcc > 1:719596/1‑140 (MQ=255)
tGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGACGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCACTGCATTAGAAATGCATATCCTGAAACGCCCAGGCGCGGAAGCGGATTACAcc < 2:880596/140‑1 (MQ=255)
ggTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGACGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTAGAAATGCATATCCTGAAACGCCCAGGCGCGGAAGCGGATTACACCgaag < 1:1645088/140‑1 (MQ=255)
gTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGACGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTAGAAATGCATATCCTGAAACGCCCAGGCGCGGAAGCGGATTACACCgaaga > 1:928975/1‑140 (MQ=255)
gCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGACGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTAGAAATGCATATCCTGAAACGCCCAGGCGCGGAAGCGGATTACACCgaagaag > 1:1350138/1‑140 (MQ=255)
tCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGACGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTAGAAATGCATATCCTGAAACGCCCAGGCGCGGAAGCGGATTACACCgaagaagaa < 1:1066209/140‑1 (MQ=255)
aCTGGACCCGTACTGACCTCGAATACGTGCTGCCAGACGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTAGAAATGCATATCCTGAAACGCCCAGGCGCGGAAGCGGATTACACCGAAGAAGAAAtt > 2:1897534/1‑140 (MQ=255)
ggACCCGTACTGACCTCGAATACGTGCTGCCAGACGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTAGAAATGCATATCCTGAAACGCCCAGGCGCGGAAGCGGATTACACCGAAGAAGAAATTGCt > 2:2135150/1‑140 (MQ=255)
ccGTACTGACCTCGAATACGTGCTGCCAGACGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTAGAAATGCATATCCTGAAACGCCCAGGCGCGGAAGCGGATTACACCGAAGAAGAAATTGCTCAgg < 1:1042739/140‑1 (MQ=255)
tACTGACCTCGAATACGTGCTGCCAGACGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTAGAAATGCATATCCTGAAACGCCCAGGCGCGGAAGCGGATTACACCGAAGAAGAAATTGCTCAGGCAg < 2:719596/140‑1 (MQ=255)
tGACCTCGAATACGTGCTGCCAGACGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTAGAAATGCATATCCTGAAACGCCCAGGCGCGGAAGCGGATTACACCGAAGAAGAAATTGCTCAGGCAGCTg < 2:282345/140‑1 (MQ=255)
gACCTCGAATACGTGCTGCCAGACGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTAGAAATGCATATCCTGAAACGCCCAGGCGCGGAAGCGGATTACACCGAAGAAGAAATTGCTCAGGCAGCTg < 1:763327/139‑1 (MQ=255)
gACCTCGAATACGTGCTGCCAGACGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTAGAAATGCATATCCTGAAACGCCCAGGCGCGGAAGCGGATTACACCGAAGAAGAAATTGCTCAGGCAGCTg > 2:763327/1‑139 (MQ=255)
gACCTCGAATACGTGCTGCCAGACGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTAGAAATGCATATCCTGAAACGCCCAGGCGCGGAAGCGGATTACACCGAAGAAGAAATTGCTCAGGCAGCTGa > 2:2266439/1‑140 (MQ=255)
gACCTCGAATACGTGCTGCCAGACGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTAGAAATGCATATCCTGAAACGCCCAGGCGCGGAAGCGGATTACACCGAAGAAGAAATTGCTCAGGCAGCTGa > 2:771864/1‑140 (MQ=255)
aCCTCGAATACGTGCTGCCAGACGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTAGAAATGCATATCCTGAAACGCCCAGGCGCGGAAGCGGATTACACCGAAGAAGAAATTGCTCAGGCAGCTGaa > 2:1338836/1‑140 (MQ=255)
aCCTCGAATACGTGCTGCCAGACGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTAGAAATGCATATCCTGAAACGCCCAGGCGCGGAAGCGGATTACACCGAAGAAGAAATTGCTCAGGCAGCTGaa > 2:34417/1‑140 (MQ=255)
aCCTCGAATACGTGCTGCCAGACGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTAGAAATGCATATCCTGAAACGCCCAGGCGCGGAAGCGGATTACACCGAAGAAGAAATTGCTCAGGCAGCTGaa < 2:1092504/140‑1 (MQ=255)
aCCTCGAATACGTGCTGCCAGACGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTAGAAATGCATATCCTGAAACGCCCAGGCGCGGAAGCGGATTACACCGAAGAAGAAATTGCTCAGGCAGCTGaa > 1:606667/1‑140 (MQ=255)
aCCTCGAATACGTGCTGCCAGACGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTAGAAATGCATATCCTGAAACGCCCAGGCGCGGAAGCGGATTACACCGAAGAAGAAATTGCTCAGGCAGCTGaa < 1:4674/140‑1 (MQ=255)
aCCTCGAATACGTGCTGCCAGACGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTAGAAATGCATATCCTGAAACGCCCAGGCGCGGAAGCGGATTACACCGAAGAAGAAATTGCTCAGGCAGCTGaa < 1:1032463/140‑1 (MQ=255)
cTCGAATACGTGCTGCCAGACGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTAGAAATGCATATCCTGAAACGCCCAGGCGCGGAAGCGGATTACACCGAAGAAGAAATTGCTCAGGCAGCTGAACg < 2:865401/140‑1 (MQ=255)
cTCGAATACGTGCTGCCAGACGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTAGAAATGCATATCCTGAAACGCCCAGGCGCGGAAGCGGATTACACCGAAGAAGAAATTGCTCAGGCAGCTGAACg < 1:1338836/140‑1 (MQ=255)
cTCGAATACGTGCTGCCAGACGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTAGAAATGCATATCCTGAAACGCCCAGGCGCGGAAGCGGATTACACCGAAGAAGAAATTGCTCAGGCAGCTGAACg < 1:1859668/140‑1 (MQ=255)
cGAATACGTGCTGCCAGACGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTAGAAATGCATATCCTGAAACGCCCAGGCGCGGAAGCGGATTACACCGAAGAAGAAATTGCTCAGGCAGCTGAACGCt < 2:898019/140‑1 (MQ=255)
aaTACGTGCTGCCAGACGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTAGAAATGCATATCCTGAAACGCCCAGGCGCGGAAGCGGATTACACCGAAGAAGAAATTGCTCAGGCAGCTGAACGCTTc < 1:1081774/140‑1 (MQ=255)
aTACGTGCTGCCAGACGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTAGAAATGCATATCCTGAAACGCCCAGGCGCGGAAGCGGATTACACCGAAGAAGAAATTGCTCAGGCAGCTGAACGCTTCg < 2:390033/140‑1 (MQ=255)
tgctgcCAGACGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTAGAAATGCATATCCTGAAACGCCCAGGCGCGGAAGCGGATTACACCGAAGAAGAAATTGCTCAGGCAGCTGAACGCTTCGCCACt > 2:791754/1‑140 (MQ=255)
tgcCAGACGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTAGAAATGCATATCCTGAAACGCCCAGGCGCGGAAGCGGATTACACCGAAGAAGAAATTGCTCAGGCAGCTGAACGCTTCGCCACTATg > 2:1400997/1‑140 (MQ=255)
ccAGACGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTAGAAATGCATATCCTGAAACGCCCAGGCGCGGAAGCGGATTACACCGAAGAAGAAATTGCTCAGGCAGCTGAACGCTTCGCCACTATGAg > 1:927959/1‑140 (MQ=255)
cGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTAGAAATGCATATCCTGAAACGCCCAGGCGCGGAAGCGGATTACACCGAAGAAGAAATTGCTCAGGCAGCTGAACGCTTCGCCACTATGAGCGATg < 1:1913824/140‑1 (MQ=255)
cTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTAGAAATGCATATCCTGAAACGCCCAGGCGCGGAAGCGGATTACACCGAAGAAGAAATTGCTCAGGCAGCTGAACGCTTCGCCACTATGAGCGATGAAg > 2:529229/1‑140 (MQ=255)
cTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTAGAAATGCATATCCTGAAACGCCCAGGCGCGGAAGCGGATTACACCGAAGAAGAAATTGCTCAGGCAGCTGAACGCTTCGCCACTATGAGCGATGAAg > 2:313117/1‑140 (MQ=255)
cAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTAGAAATGCATATCCTGAAACGCCCAGGCGCGGAAGCGGATTACACCGAAGAAGAAATTGCTCAGGCAGCTGAACGCTTCGCCACTATGAGCGATGAAGACa < 2:2102356/140‑1 (MQ=255)
aGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTAGAAATGCATATCCTGAAACGCCCAGGCGCGGAAGCGGATTACACCGAAGAAGAAATTGCTCAGGCAGCTGAACGCTTCGCCACTATGAGCGATGAAGACAAAg < 1:2356069/140‑1 (MQ=255)
aGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTAGAAATGCATATCCTGAAACGCCCAGGCGCGGAAGCGGATTACACCGAAGAAGAAATTGCTCAGGCAGCTGAACGCTTCGCCACTATGAGCGATGAAGACAAAg < 1:1558150/140‑1 (MQ=255)
ctGCGCTTCGACCAGATCGAATTCGCTGCATTAGAAATGCATATCCTGAAACGCCCAGGCGCGGAAGCGGATTACACCGAAGAAGAAATTGCTCAGGCAGCTGAACGCTTCGCCACTATGAGCGa < 2:1170729/125‑1 (MQ=255)
ctGCGCTTCGACCAGATCGAATTCGCTGCATTAGAAATGCATATCCTGAAACGCCCAGGCGCGGAAGCGGATTACACCGAAGAAGAAATTGCTCAGGCAGCTGAACGCTTCGCCACTATGAGCGa > 1:1170729/1‑125 (MQ=255)
tGCGCTTCGACCAGATCGAATTCGCTGCATTAGAAATGCATATCCTGAAACGCCCAGGCGCGGAAGCGGATTACACCGAAGAAGAAATTGCTCAGGCAGCTGAACGCTTCGCCACTATGAGCGATGAAGACAAAGCGCGt > 1:134586/1‑140 (MQ=255)
tGCGCTTCGACCAGATCGAATTCGCTGCATTAGAAATGCATATCCTGAAACGCCCAGGCGCGGAAGCGGATTACACCGAAGAAGAAATTGCTCAGGCAGCTGAACGCTTCGCCACTATGAGCGATGAAGACAAAGCGCGt > 1:2022089/1‑140 (MQ=255)
gcgcTTCGACCAGATCGAATTCGCTGCATTAGAAATGCATATCCTGAAACGCCCAGGCGCGGAAGCGGATTACACCGAAGAAGAAATTGCTCAGGCAGCTGAACGCTTCGCCACTATGAGCGATGAAGACAAAGCGCGTc < 1:1897534/140‑1 (MQ=255)
gcgcTTCGACCAGATCGAATTCGCTGCATTAGAAATGCATATCCTGAAACGCCCAGGCGCGGAAGCGGATTACACCGAAGAAGAAATTGCTCAGGCAGCTGAACGCTTCGCCACTATGAGCGATGAAGACAAAGCGCGTc < 1:1108945/140‑1 (MQ=255)
cgcTTCGACCAGATCGAATTCGCTGCATTAGAAATGCATATCCTGAAACGCCCAGGCGCGGAAGCGGATTACACCGAAGAAGAAATTGCTCAGGCAGCTGAACGCTTCGCCACTATGAGCGATGAAGACAAAGCGCGTCt > 1:365340/1‑140 (MQ=255)
cTTCGACCAGATCGAATTCGCTGCATTAGAAATGCATATCCTGAAACGCCCAGGCGCGGAAGCGGATTACACCGAAGAAGAAATTGCTCAGGCAGCTGAACGCTTCGCCACTATGAGCGATGAAGACAAAGCGCGTCTGa < 1:2107081/140‑1 (MQ=255)
ttCGACCAGATCGAATTCGCTGCATTAGAAATGCATATCCTGAAACGCCCAGGCGCGGAAGCGGATTACACCGAAGAAGAAATTGCTCAGGCAGCTGAACGCTTCGCCACTATGAGCGATGAAGACAAAGCGCGt < 1:955135/135‑1 (MQ=255)
ttCGACCAGATCGAATTCGCTGCATTAGAAATGCATATCCTGAAACGCCCAGGCGCGGAAGCGGATTACACCGAAGAAGAAATTGCTCAGGCAGCTGAACGCTTCGCCACTATGAGCGATGAAGACAAAGCGCGTCTGAc < 1:791754/140‑1 (MQ=255)
tCGACCAGATCGAATTCGCTGCATTAGAAATGCATATCCTGAAACGCCCAGGCGCGGAAGCGGATTACACCGAAGAAGAAATTGCTCAGGCAGCTGAACGCTTCGCCACTATGAGCGATGAAGACAAAGCGCGTCTGAcc < 2:738174/140‑1 (MQ=255)
aCCAGATCGAATTCGCTGCATTAGAAATGCATATCCTGAAACGCCCAGGCGCGGAAGCGGATTACACCGAAGAAGAAATTGCTCAGGCAGCTGAACGCTTCGCCACTATGAGCGATGAAGACAAAGCGCGTCTGACCCGt < 1:398243/140‑1 (MQ=255)
aCCAGATCGAATTCGCTGCATTAGAAATGCATATCCTGAAACGCCCAGGCGCGGAAGCGGATTACACCGAAGAAGAAATTGCTCAGGCAGCTGAACGCTTCGCCACTATGAGCGATGAAGACAAAGCGCGTCTGACCCGt < 1:2135150/140‑1 (MQ=255)
aCCAGATCGAATTCGCTGCATTAGAAATGCATATCCTGAAACGCCCAGGCGCGGAAGCGGATTACACCGAAGAAGAAATTGCTCAGGCAGCTGAACGCTTCGCCACTATGAGCGATGAAGACAAAGCGCGTCTGACCCGt < 2:1633583/140‑1 (MQ=255)
aGATCGAATTCGCTGCATTAGAAATGCATATCCTGAAACGCCCAGGCGCGGAAGCGGATTACACCGAAGAAGAAATTGCTCAGGCAGCTGAACGCTTCGCCACTATGAGCGATGAAGACAAAGCGCGTCTGACCCGTAAc < 2:2279976/140‑1 (MQ=255)
tCGAATTCGCTGCATTAGAAATGCATATCCTGAAACGCCCAGGCGCGGAAGCGGATTACACCGAAGAAGAAATTGCTCAGGCAGCTGAACGCTTCGCCACTATGAGCGATGAAGACAAAGCGCGTCTGACCCGTAAcatc < 1:1523647/140‑1 (MQ=255)
gAATTCGCTGCATTAGAAATGCATATCCTGAAACGCCCAGGCGCGGAAGCGGATTACACCGAAGAAGAAATTGCTCAGGCAGCTGAACGCTTCGCCACTATGAGCGATGAAGACAAAGCGCGTCTGACCCGTAAcatcat < 1:1577727/140‑1 (MQ=255)
gAATTCGCTGCATTAGAAATGCATATCCTGAAACGCCCAGGCGCGGAAGCGGATTACACCGAAGAAGAAATTGCTCAGGCAGCTGAACGCTTCGCCACTATGAGCGATGAAGACAAAGCGCGTCTGACCCGTAAcatcat < 2:842863/140‑1 (MQ=255)
gAATTCGCTGCATTAGAAATGCATATCCTGAAACGCCCAGGCGCGGAAGCGGATTACACCGAAGAAGAAATTGCTCAGGCAGCTGAACGCTTCGCCACTATGAGCGATGAAGACAAAGCGCGTCTGACCCGTAAcatcat < 2:343501/140‑1 (MQ=255)
gAATTCGCTGCATTAGAAATGCATATCCTGAAACGCCCAGGCGCGGAAGCGGATTACACCGAAGAAGAAATTGCTCAGGCAGCTGAACGCTTCGCCACTATGAGCGATGAAGACAAAGCGCGTCTGACCCGTAAcat < 2:785215/137‑1 (MQ=255)
gAATTCGCTGCATTAGAAATGCATATCCTGAAACGCCCAGGCGCGGAAGCGGATTACACCGAAGAAGAAATTGCTCAGGCAGCTGAACGCTTCGCCACTATGAGCGATGAAGACAAAGCGCGTCTGACCCGTAAcat > 1:785215/1‑137 (MQ=255)
tCGCTGCATTAGAAATGCATATCCTGAAACGCCCAGGCGCGGAAGCGGATTACACCGAAGAAGAAATTGCTCAGGCAGCTGAACGCTTCGCCACTATGAGCGATGAAGACAAAGCGCGTCTGACCCGTAACATCATTGCt < 2:134586/140‑1 (MQ=255)
cTGCATTAGAAATGCATATCCTGAAACGCCCAGGCGCGGAAGCGGATTACACCGAAGAAGAAATTGCTTAGGCAGCTGAACGCTTCGCCACTATGAGCGATGAAGACAAAGCGCGTCTGACCCGTAACATCATTGCTGGt < 1:274164/140‑1 (MQ=255)
cTGCATTAGAAATGCATATCCTGAAACGCCCAGGCGCGGAAGCGGATTACACCGAAGAAGAAATTGCTCAGGCAGCTGAACGCTTCGCCACTATGAGCGATGAAGACAAAGCGCGTCTGACCCGTAACATCATTGCTGGt > 1:1606145/1‑140 (MQ=255)
cTGCATTAGAAATGCATATCCTGAAACGCCCAGGCGCGGAAGCGGATTACACCGAAGAAGAAATTGCTCAGGCAGCTGAACGCTTCGCCACTATGAGCGATGAAGACAAAGCGCGTCTGACCCGTAACATCATTGCTGGt > 1:1074793/1‑140 (MQ=255)
cTGCATTAGAAATGCATATCCTGAAACGCCCAGGCGCGGAAGCGGATTACACCGAAGAAGAAATTGCTCAGGCAGCTGAACGCTTCGCCACTATGAGCGATGAAGACAAAGCGCGTCTGACCCGTAACATCATTGCTGGt > 2:616789/1‑140 (MQ=255)
cTGCATTAGAAATGCATATCCTGAAACGCCCAGGCGCGGAAGCGGATTACACCGAAGAAGAAATTGCTCAGGCAGCTGAACGCTTCGCCACTATGAGCGATGAAGACAAAGCGCGTCTGACCCGTAACATCATTGCTGGt > 1:2306960/1‑140 (MQ=255)
cTGCATTAGAAATGCATATCCTGAAACGCCCAGGCGCGGAAGCGGATTACACCGAAGAAGAAATTGCTCAGGCAGCTGAACGCTTCGCCACTATGAGCGATGAAGACAAAGCGCGTCTGACCCGTAACATCATTGCTGGt > 2:2371397/1‑140 (MQ=255)
|
AACCTGGCGCAGTGTGGCATTCGCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGACGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGCCCAGGCGCGGAAGCGGATTACACCGAAGAAGAAATTGCTCAGGCAGCTGAACGCTTCGCCACTATGAGCGATGAAGACAAAGCGCGTCTGACCCGTAACATCATTGCTGGTC > NC_000913/4551906‑4552176
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
