Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A14 F73 I1 R1
|
28 |
130.3 |
4467684 |
99.3% |
4436410 |
139.3 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,353,199 |
G→T |
V284V (GTC→GTA) |
yhcC ← |
radical SAM family oxidoreductase YhcC |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,353,199 | 0 | G | T | 99.1%
| 387.2
/ ‑3.2
| 110 | V284V (GTC→GTA) | yhcC | radical SAM family oxidoreductase YhcC |
| Reads supporting (aligned to +/- strand): ref base G (1/0); new base T (67/42); total (68/42) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.72e-01 |
Only 100 of 113 total aligned reads displayed.
AATTCTGACAGTTACGTTATAAATTGTGTGAGAAATGCGGAATTCCCCTCAACGACCTACTCCGTTGGAGGTAGCCACGGACGTCCCAGCGCCGATCCCTGTACGCCATGTTCATTCAGATAGCGATCCAGCTCGACCATTCCCGTCCATCGATTTTCGCACCACAGCGGAGCAAGCAGCGTCGGGCGACGGGCGCTGGCGGAAATGCGGTGGTAGAT‑‑CACTTCCGGTGGCGTATGGCGAATCATTTCTCCGGCAGTGAGCGTGTAATC > NC_000913/3353065‑3353333
|
aaTTCTGACAGTTACGTTATAAATTGTGTGAGAAATGCGGAATTCCCCTCAACGACCTACTCCGTTGGAGGTAGCCACGGACGTCCCAGCGCCGATCCCTGTACGCCATGTTCATTCAGATAGTGATCCAGCTCTACCAt > 1:805811/1‑140 (MQ=255)
aaTTCTGACAGTTACGTTATAAATTGTGTGAGAAATGCGGAATTCCCCTCAACGACCTACTCCGTTGGAGGTAGCCACGGACGTCCCAGCGCCGATCCCTGTACGCCATGTTCATTCAGATAGCGATCCAGCTCTACCAt > 2:1292642/1‑140 (MQ=255)
aaTTCTGACAGTTACGTTATAAATTGTGTGAGAAATGCGGAATTCCCCTCAACGACCTACTCCGTTGGAGGTAGCCACGGACGTCCCAGCGCCGATCCCTGTACGCCATGTTCATTCAGATAGCGATCCAGCTCTACCAt > 2:588376/1‑140 (MQ=255)
aaTTCTGACAGTTACGTTATAAATCGTGTGAGAAATGCGGAATTCCCCTCAACGACCTACTCCGTTGGAGGTAGCCACGGACGTCCCAGCGCCGATCCCTGTACGCCATGTTCATTCAGATAGCGATCCAGCTCTACCAt > 2:89042/1‑140 (MQ=255)
ttCTGACAGTTACGTTATAAATTGTGTGAGAAATGCGGAATTCCCCTCAACGACCTACTCCGTTGGAGGTAGCCACGGACGTCCCAGCGCCGATCCCTGTACGCCATGTTCATTCAGATAGCGATCCAGCTCTACCATTc > 1:1162780/1‑140 (MQ=255)
ttCTGACAGTTACGTTATAAATTGTGTGAGAAATGCGGAATTCCCCTCAACGACCTACTCCGTTGGAGGTAGCCACGGACGTCCCAGCGCCGATCCCTGTACGCCATGTTCATTCAGATAGCGATCCAGCTCTACCATTc > 2:762105/1‑140 (MQ=255)
tGACAGTTACGTTATAAATTGTGTGAGAAATGCGGAATTCCCCTCAACGACCTACTCCGTTGGAGGTAGCCACGGACGTCCCAGCGCCGATCCCTGTACGCCATGTTCATTCAGATAGCGATCCAGCTCTACCATTCCCg > 1:178244/1‑140 (MQ=255)
aCAGTTACGTTATAAATTGTGTGAGAAATGCGGAATTCCCCTCAACGACCTACTCCGTTGGAGGTAGCCACGGACGTCCCAGCGCCGATCCCTGTACGCCATGTTCATTCAGATAGCGATCCAGCTCTACCATTCCCGTc > 2:1589711/1‑140 (MQ=255)
tACGTTATAAATTGTGTGAGAAATGCGGAATTCCCCTCAACGACCTACTCCGTTGGAGGTAGCCACGGACGTCCCAGCGCCGATCCCTGTACGCCATGTTCATTCAGATAGCGATCCAGCTCTACCATTCCCGTCCATCg > 1:1954835/1‑140 (MQ=255)
tACGTTATAAATTGTGTGAGAAATGCGGAATTCCCCTCAACGACCTACTCCGTTGGAGGTAGCCACGGACGTCCCAGCGCCGATCCCTGTACGCCATGTTCATTCAGATAGCGATCCAGCTCTACCATTCCCGTCCATCg < 2:299796/140‑1 (MQ=255)
tACGTTATAAATTGTGTGAGAAATGCGGAATTCCCCTCAACGACCTACTCCGTTGGAGGTAGCCACGGACGTCCCAGCGCCGATCCCTGTACGCCATGTTCATTCAGATAGCGATCCAGCTCTACCATTCCCGTCCATCg > 2:1417302/1‑140 (MQ=255)
cGTTATAAATTGTGTGAGAAATGCGGAATTCCCCTCAACGACCTACTCCGTTGGAGGTAGCCACGGACGTCCCAGCGCCGATCCCTGTACGCCATGTTCATTCAGATAGCGATCCAGCTCTACCATTCCCGTCCATCGAt < 2:1287273/140‑1 (MQ=255)
taAATTGTGTGAGAAATGCGGAATTCCCCTCAACGACCTACTCCGTTGGAGGTAGCCACGGACGTCCCAGCGCCGATCCCTGTACGCCATGTTCATTCAGATAGCGATCCAGCTCTACCATTCCCGTCCATCGATTTTCg < 2:2087449/140‑1 (MQ=255)
taAATTGTGTGAGAAATGCGGAATTCCCCTCAACGACCTACTCCGTTGGAGGTAGCCACGGACGTCCCAGCGCCGATCCCTGTACGCCATGTTCATTCAGATAGCGATCCAGCTCTACCATTCCCGTCCATCGATTTTCg < 2:1376431/140‑1 (MQ=255)
aaTTGTGTGAGAAATGCGGAATTCCCCTCAACGACCTACTCCGTTGGAGGTAGCCACGGACGTCCCAGCGCCGATCCCTGTACGCCATGTTCATTCAGATAGCGATCCAGCTCTACCATTCCCGTCCATCGATTTTCGca > 1:864780/1‑140 (MQ=255)
tgtgtgAGAAATGCGGAATTCCCCTCAACGACCTACTCCGTTGGAGGTAGCCACGGACGTCCCAGCGCCGATCCCTGTACGCCATGTTCATTCAGATAGCGATCCAGCTCTACCATTCCCGTCCATCGATTTTCGcacca > 1:834554/1‑140 (MQ=255)
gtgtgAGAAATGCGGAATTCCCCTCAACGACCTACTCCGTTGGAGGTAGCCACGGACGTCCCAGCGCCGATCCCTGTACGCCATGTTCATTCAGATAGCGATCCAGCTCTACCATTCCCGTCCATCGATTTTCGcaccac > 1:1048385/1‑140 (MQ=255)
gtgtgAGAAATGCGGAATTCCCCTCAACGACCTACTCCGTTGGAGGTAGCCACGGACGTCCCAGCGCCGATCCCTGTACGCCATGTTCATTCAGATAGCGATCCAGCTCTACCATTCCCGTCCATCGATTTTCGcaccac > 1:1945907/1‑140 (MQ=255)
gtgtgAGAAATGCGGAATTCCCCTCAACGACCTACTCCGTTGGAGGTAGCCACGGACGTCCCAGCGCCGATCCCTGTACGCCATGTTCATTCAGATAGCGATCCAGCTCTACCATTCCCGTCCATCGATTTTCGcaccac > 1:182759/1‑140 (MQ=255)
tgtgAGAAATGCGGAATTCCCCTCAACGACCTACTCCGTTGGAGGTAGCTACGGACGTCCCAGCGCCGATCCCTGTACGCCTTGTTCATTCAGATAGCGATCCAGCTCTACCATTCCCGTCCATCGATTTTCGCACcaca > 2:827660/1‑140 (MQ=255)
tgtgAGAAATGCGGAATTCCCCTCAACGACCTACTCCGTTGGAGGTAGCCACGGACGTCCCAGCGCCGATCCCTGTACGCCATGTTCATTCAGATAGTGATCCAGCTCTACCATTCCCGTCCATCGATTTTCGCACcaca < 2:805811/140‑1 (MQ=255)
tgtgAGAAATGCGGAATTCCCCTCAACGACCTACTCCGTTGGAGGTAGCCACGGACGTCCCAGCGCCGATCCCTGTACGCCATGTTCATTCAGATAGCGATCCAGCTCTACCATTCCCGTCCATCGATTTTCGCACcaca > 2:25180/1‑140 (MQ=255)
tgtgAGAAATGCGGAATTCCCCTCAACGACCTACTCCGTTGGAGGTAGCCACGGACGTCCCAGCGCCGATCCCTGTACGCCATGTTCATTCAGATAGCGATCCAGCTCTACCATTCCCGTCCATCGATTTTCGCACcaca > 2:797789/1‑140 (MQ=255)
tgtgAGAAATGCGGAATTCCCCTCAACGACCTACTCCGTTGGAGGTAGCCACGGACGTCCCAGCGCCGATCCCTGTACGCCATGTTCATTCAGATAGCGATCCAGCTCTACCATTCCCGTCCATCGATTTTCGCACcaca < 1:588376/140‑1 (MQ=255)
tgtgAGAAATGCGGAATTCCCCTCAACGACCTACTCCGTTGGAGGTAGCCACGGACGTCCCAGCGCCGATCCCTGTACGCCATGTTCATTCAGATAGCGATCCAGCTCTACCATTCCCGTCCATCGATTTTCGCACcaca > 1:328938/1‑140 (MQ=255)
tgtgAGAAATGCGGAATTCCCCTCAACGACCTACTCCGTTGGAGGTAGCCACGGACGTCCCAGCGCCGATCCCTGTACGCCATGTTCATTCAGATAGCGATCCAGCTCTACCATTCCCGTCCATCGATTTTCGCACcaca > 2:1922933/1‑140 (MQ=255)
tgtgAGAAATGCGGAATTCCCCTCAACGACCTACTCCGTTGGAGGTAGCCACGGACGTCCCAGCGCCGATCCCTGTACGCCATGTTCATTCAGATAGCGATCCAGCTCTACCATTCCCGTCCATCGATTTTCGCACcaca > 2:2097687/1‑140 (MQ=255)
tgtgAGAAATGCGGAATTCCCCTCAACGACCTACTCCGTTGGAGGTAGCCACGGACGTCCCAGCGCCGATCCCTGTACGCCATGTTCATTCAGATAGCGATCCAGCTCTACCATTCCCGTCCATCGATTTTCGCACcaca < 1:1937995/140‑1 (MQ=255)
gtgAGAAATGCGGAATTCCCCTCAACGACCTACTCCGTTGGAGGTAGCCACGGACGTCCCAGCGCCGATCCCTGTACGCCATGTTCATTCAGATAGCGATCCAGCTCTACCATTCCCGTCCATCGATTTTCGCACCACAg < 1:1668262/140‑1 (MQ=255)
tgAGAAATGCGGAATTCCCCTCAACGACCTACTCCGTTGGAGGTAGCCACGGACGTCCCAGCGCCGATCCCTGTACGCCATGTTCATTCAGATAGCGATCCAGCTCTACCATTCCCGTCCATCGATTTTCGCACCACAGc < 2:1743968/140‑1 (MQ=255)
gaAATGCGGAATTCCCCTCAACGACCTACTCCGTTGGAGGTAGCCACGGACGTCCCAGCGCCGATCCCTGTACGCCATGTTCATTCAGATAGCGATCCAGCTCTACCATTCCCGTCCATCGATTTTCGCACCACAGCGGa < 2:1684325/140‑1 (MQ=255)
gCGGAATTCCCCTCAACGACCTACTCCGTTGGAGGTAGCCACGGACGTCCCAGCGCCGATCCCTGTACGCCATGTTCATTCAGATAGCGATCCAGCTCTACCATTCCCGTCCATCGATTTTCGCACCACAGCGGagcaag > 1:1926628/1‑140 (MQ=255)
gCGGAATTCCCCTCAACGACCTACTCCGTTGGAGGTAGCCACGGACGTCCCAGCGCCGATCCCTGTACGCCATGTTCATTCAGATAGCGATCCAGCTCTACCATTCCCGTCCATCGATTTTCGCACCACAGCGGagcaag > 1:1274317/1‑140 (MQ=255)
cGGAATTCCCCTCAACGACCTACTCCGTTGGAGGTAGCCACGGACGTCCCAGCGCCGATCCCTGTACGCCATGTTCATTCAGATAGCGATCCAGCTCTACCATTCCCGTCCATCGATTTTCGCACCACAGCGGagcaagc > 2:121944/1‑140 (MQ=255)
cGGAATTCCCCTCAACGACCTACTCCGTTGGAGGTAGCCACGGACGTCCCAGCGCCGATCCCTGTACGCCATGTTCATTCAGATAGCGATCCAGCTCTACCATTCCCGTCCATCGATTTTCGCACCACAGCGGagcaagc > 2:294360/1‑140 (MQ=255)
aCTCCGTTGGAGGTAGCCACGGACGTCCCAGCGCCGATCCCTGTACGCCATGTTCATTCAGATAGCGATCCAGCTCTACCATTCCCGTCCATCGATTTTCGCACCACAGCGGAGCAAGCAGCGTCGGGCGACGGGCGCTg > 1:923030/1‑140 (MQ=255)
aCTCCGTTGGAGGTAGCCACGGACGTCCCAGCGCCGATCCCTGTACGCCATGTTCATTCAGATAGCGATCCAGCTCTACCATTCCCGTCCATCGATTTTCGCACCACAGCGGAGCAAGCAGCGTCGGGCGACGGGCGCTg > 1:2161095/1‑140 (MQ=255)
cTCCGTTGGAGGTAGCCACGGACGTCCCAGCGCCGATCCCTGTACGCCATGTTCATTCAGATAGCGATCCAGCTCTACCATTCCCGTCCATCGATTTTCGCACCACAGCGGAGCAAGCAGCGTCGGGCGACGGGCGCTgg > 1:80615/1‑140 (MQ=255)
tCCGTTGGAGGTAGCCACGGACGTCCCAGCGCCGATCCCTGTACGCCATGTTCATTCAGATAGCGATCCAGCTCTACCATTCCCGTCCATCGATTTTCGCACCACAGCGGAGCAAGCAGCGTCGGGCGACGGGCGCTGGc > 1:2143899/1‑140 (MQ=255)
ttGGAGGTAGCCACGGACGTCCCAGCGCCGATCCCTGTACGCCATGTTCATTCAGATAGCGATCCAGCTCTACCATTCCCGTCCATCGATTTTCGCACCACAGCGGAGCAAGCAGCGTCGGGCGACGGGCGCTGGCGGaa > 1:1264236/1‑140 (MQ=255)
gAGGTAGCCACGGACGTCCCAGCGCCGATCCCTGTACGCCATGTTCATTCAGATAGCGATCCAGCTCTACCATTCCCGTCCATCGATTTTCGCACCACAGCGGAGCAAGCAGCGTCGGGCGACGGGCGCTGGCGGAAATg < 1:1292642/140‑1 (MQ=255)
gAGGTAGCCACGGACGTCCCAGCGCCGATCCCTGTACGCCATGTTCATTCAGATAGCGATCCAGCTCTACCATTCCCGTCCATCGATTTTCGCACCACAGCGGAGCAAGCAGCGTCGGGCGACGGGCGCTGGCGGAAATg < 1:1305042/140‑1 (MQ=255)
gAGGTAGCCACGGACGTCCCAGCGCCGATCCCTGTACGCCATGTTCATTCAGATAGCGATCCAGCTCTACCATTCCCGTCCATCGATTTTCGCACCACAGCGGAGCAAGCAGCGTCGGGCGACGGGCGCTGGCGGAAATg < 1:1922933/140‑1 (MQ=255)
aGGTAGCCACGGACGTCCCAGCGCCGATCCCTGTACGCCATGTTCATTCAGATAGCGATCCAGCTCTACCATTCCCGTCCATCGATTTTCGCACCACAGCGGAGCAAGCAGCGTCGGGCGACGGGCGCTGGCGGAAATGc < 2:1147271/140‑1 (MQ=255)
ggTAGCCACGGACGTCCCAGCGCCGATCCCTGTACGCCATGTTCATTCAGATAGCGATCCAGCTCTACCATTCCCGTCCATCGATTTTCGCACCACAGCGGAGCAAGCAGCGTCGGGCGACGGGCGCTGGCGGAAATGCg > 2:894636/1‑140 (MQ=255)
ggTAGCCACGGACGTCCCAGCGCCGATCCCTGTACGCCATGTTCATTCAGATAGCGATCCACCTCTACCATTCCCGTCCATCGATTTTCGCACCACAGCGGAGCAAGCAGCGTCGGGCGACGGGCGCTGGCGGAAATGCg > 2:232012/1‑140 (MQ=255)
aGCCACGGACGTCCCAGCGCCGATCCCTGTACGCCATGTTCATTCAGATAGCGATCCAGCTCTACCATTCCCGTCCATCGATTTTCGCACCACAGCGGAGCAAGCAGCGTCGGGCGACGGGCGCTGGCGGAAATGCggtg > 2:1625928/1‑140 (MQ=255)
aGCCACGGACGTCCCAGCGCCGATCCCTGTACGCCATGTTCATTCAGATAGCGATCCAGCTCTACCATTCCCGTCCATCGATTTTCGCACCACAGCGGAGCAAGCAGCGTCGGGCGACGGGCGCTGGCGGAAATGCggtg > 2:481047/1‑140 (MQ=255)
gCCACGGACGTCCCAGCGCAGATCCCTGTACGCCATGTTCATTCAGATAGCGATCCAGCTCTACCATTCCCGTCCATCGATTTTCGCACCACAGCGGAGCAAGCAGCGTCGGGCGACGGGCGCTGGCGGAAATGCggtgg < 1:2123601/140‑1 (MQ=255)
aCGGACGTCCCAGCGCCGATCCCTGTACGCCATGTTCATTCAGATAGCGATCCAGCTCTACCATTCCCGTCCATCGATTTTCGCACCACAGCGGAGCAAGCAGCGTCGGGCGACGGGCGCTGGCGGAAATGCGGTGGTAg < 1:1728354/140‑1 (MQ=255)
gACGTCCCAGCGCCGATCCCTGTACGCCATGTTCATTCAGATAGCGATCCAGCTCTACCATTCCCGTCCATCGATTTTCGCACCACAGCGGAGCAAGCAGCGTCGGGCGACGGGCGCTGGCGGAAATGCGGTGGTAGAT‑‑c > 2:1990046/1‑140 (MQ=255)
gACGTCCCAGCGCCGATCCCTGTACGCCATGTTCATTCAGATAGCGATCCAGCTCTACCATTCCCGTCCATCGATTTTCGCACCACAGCGGAGCAAGCAGCGTCGGGCGACGGGCGCTGGCGGAAATGCGGTGGTAGAT‑‑c > 2:1332872/1‑140 (MQ=255)
aCGTCCCAGCGCCGATCCCTGTACGCCATGTTCATTCAGATAGCGATCCAGCTCTACCATTCCCGTCCATCGATTTTCGCACCACAGCGGAGCAAGCAGCGTCGGGCGACGGGCGCTGGCGGAAATGCGGTGGTAGAT‑‑Ca > 1:1014547/1‑140 (MQ=255)
tCCCAGCGCCGATCCCTGTACGCCATGTTCATTCAGATAGCGATCCAGCTCTACCATTCCCGTCCATCGATTTTCGCACCACAGCGGAGCAAGCAGCGTCGGGCGACGGGCGCTGGCGGAAATGCGGTGGTAGAT‑‑CACtt > 1:1642261/1‑140 (MQ=255)
cccAGCGCCGATCCCTGTACGCCATGTTCATTCAGATAGCGATCCAGCTCTACCATTCCCGTCCATCGATTTTCGCACCACAGCGGAGCAAGCAGCGTCGGGCGACGGGCGCTGGCGGAAATGCGGTGGTAGAT‑‑CACTTc > 1:1783677/1‑140 (MQ=255)
cAGCGCCGATCCCTGTACGCCATGTTCATTCAGATAGCGATCCAGCTCTACCATTCCCGTCCATCGATTTTCGCACCACAGCGGAGCAAGCAGCGTCGGGCGACGGGCGCTGGCGGAAATGCGGTGGTAGAT‑‑CACTTCCg < 2:1783677/140‑1 (MQ=255)
cAGCGCCGATCCCTGTACGCCATGTTCATTCAGATAGCGATCCAGCTCTACCATTCCCGTCCATCGATTTTCGCACCACAGCGGAGCAAGCAGCGTCGGGCGACGGGCGCTGGCGGAAATGCGGTGGTAGAT‑‑CACTTCCg < 2:465641/140‑1 (MQ=255)
aGCGCCGATCCCTGTACGCCATGTTCATTCAGATAGCGATCCAGCTCTACCATTCCCGTCCATCGATTTTCGCACCACAGCGGAGCAAGCAGCGTCGGGCGACGGGCGCTGGCGGAAATGCGGTGGTAGAT‑‑CACTTCCgg < 2:1945907/140‑1 (MQ=255)
cgcCGATATCTGTACGCCATGTTCATTCAGATAGCGATCCAGCTCTACCATTCCCGTCCATCGATTTTCGCACCACAGCGGAGCAAGCAGCGTCGGGCGACGGGCGCTGGCGGAAATGCGGTGGTAGAT‑‑CACTTCCGGTg > 2:301679/1‑140 (MQ=255)
aTCCCTGTACGCCATGTTCATTCAGATAGCGATCCAGCTCTACCATTCCCGTCCATCGATTTTCGCACCACAGCGGAGCAAGCAGCGTCGGGCGACGGGCGCTGGCGGAAATGCGGTGGTAGATCACACTTCCGGTGGCg > 2:2174392/1‑140 (MQ=255)
aTCCCTGTACGCCATGTTCATTCAGATAGCGATCCAGCTCTACCATTCCCGTCCATCGATTTTCGCACCACAGCGGAGCAAGCAGCGTCGGGCGACGGGCGCTGGCGGAAATGCGGTGGTAGAT‑‑CACTTCCGGTGGCGTa > 1:64040/1‑140 (MQ=255)
aTCCCTGTACGCCATGTTCATTCAGATAGCGATCCAGCTCTACCATTCCCGTCCATCGATTTTCGCACCACAGCGGAGCAAGCAGCGTCGGGCGACGGGCGCTGGCGGAAATGCGGTGGTAGAT‑‑CACTTCCGGTGGCGTa > 2:2161780/1‑140 (MQ=255)
aTCCCTGTACGCCATGTTCATTCAGATAGCGATCCAGCTCTACCATTCCCGTCCATCGATTTTCGCACCACAGCGGAGCAAGCAGCGTCGGGCGACGGGCGCTGGCGGAAATGCGGTGGTAGAT‑‑CACTTCCGGTGGCGTa > 2:2170000/1‑140 (MQ=255)
aTCCCTGTACGCCATGTTCATTCAGATAGCGATCCAGCTCTACCATTCCCGTCCATCGATTTTCGCACCACAGCGGAGCAAGCAGCGTCGGGCGACGGGCGCTGGCGGAAATGCGGTGGTAGAT‑‑CACTTCCGGTGGCGTa > 2:1800436/1‑140 (MQ=255)
aTCCCTGTACGCCATGTTCATTCAGATAGCGATCCAGCTCTACCATTCCCGTCCATCGATTTTCGCACCACAGCGGAGCAAGCAGCGTCGGGCGACGGGCGCTGGCGGAAATGCGGTGGTAGAT‑‑CACTTCCGGTGGCGTa > 1:199079/1‑140 (MQ=255)
aTCCCTGTACGCCATGTTCATTCAGATAGCGATCCAGCTCTACCATTCCCGTCCATCGATTTTCGCACCACAGCGGAGCAAGCAGCGTCGGGCGACGGGCGCTGGCGGAAATGCGGTGGTAGAT‑‑CACTTCCGGTGGCGTa > 2:1331945/1‑140 (MQ=255)
cccTGTACGCCATGTTCATTCAGATAGCGATCCAGCTCTACCATTCCCGTCCATCGATTTTCGCACCACAGCGGAGCAAGCAGCGTCGGGCGACGGGTGCTGGCGGAAATGCGGTGGTAGAT‑‑CACTTCCGGTGGCGTATg > 1:1871789/1‑140 (MQ=255)
ccTGTACGCCATGTTCATTCAGATAGCGATCCAGCTCTACCATTCCCGTCCATCGATTTTCGCACCACAGCGGAGCAAGCAGCGTCGGGCGACGGGCGCTGGCGGAAATGCGGTGGTAGAT‑‑CACTTCCGGTGGCGTATgg < 1:740414/140‑1 (MQ=255)
tGTACGCCATGTTCATTCAGATAGCGATCCAGCTCTACCATTCCCGTCCATCGATTTTCGCACCACAGCGGAGCAAGCAGCGTCGGGCGACGGGCGCTGGCGGAAATGCGGTGGTAGAT‑‑CACTTCCGGTGGCGTATGGCg < 1:89042/140‑1 (MQ=255)
tGTACGCCATGTTCATTCAGATAGCGATCCAGCTCTACCATTCCCGTCCATCGATTTTCGCACCACAGCGGAGCAAGCAGCGTCGGGCGACGGGCGCTGGCGGAAATGCGGTGGTAGAT‑‑CACTTCCGGTGGCGTATGGCg > 2:1781731/1‑140 (MQ=255)
tGTACGCCATGTTCATTCAGATAGCGATCCAGCTCTACCATTCCCGTCCATCGATTTTCGCACCACAGCGGAGCAAGCAGCGTCGGGCGACGGGCGCTGGCGGAAATGCGGTGGTAGAT‑‑CACTTCCGGTGGCGTATGGCg < 1:1841183/140‑1 (MQ=255)
cGCCATGTTCATTCAGATAGCGATCCAGCTCTACCATTCCCGTCCATCGATTTTCGCACCACAGCGGAGCAAGCAGCGTCGGGCGACGGGCGCTGGCGGAAATGCGGTGGTAGAT‑‑CACTTCCGGTGGCGTATGGCGAATc < 1:585252/140‑1 (MQ=255)
cATGTTCATTCAGATAGCGATCCAGCTCTACCATTCCCGTCCATCGATTTTCGCACCACAGCGGAGCAAGCAGCGTCGGGCGACGGGCGCTGGCGGAAATGCGGTGGTAGAT‑‑CACTTCCGGTGGCGTATGGCGAATCAtt > 2:1019215/1‑140 (MQ=255)
cATGTTCATTCAGATAGCGATCCAGCTCTACCATTCCCGTCCATCGATTTTCGCACCACAGCGGAGCAAGCAGCGTCGGGCGACGGGCGCTGGCGGAAATGCGGTGGTAGAT‑‑CACTTCCGGTGGCGTATGGCGAATCAtt > 2:892360/1‑140 (MQ=255)
cATGTTCATTCAGATAGCGATCCAGCTCTACCATTCCCGTCCATCGATTTTCGCACCACAGCGGAGCAAGCAGCGTCGGGCGACGGGCGCTGGCGGAAATGCGGTGGTAGAT‑‑CACTTCCGGTGGCGTATGGCGAATCAtt > 2:890738/1‑140 (MQ=255)
cATGTTCATTCAGATAGCGATCCAGCTCTACCATTCCCGTCCATCGATTTTCGCACCACAGCGGAGCAAGCAGCGTCGGGCGACGGGCGCTGGCGGAAATGCGGTGGTAGAT‑‑CACTTCCGGTGGCGTATGGCGAATCAtt > 1:789670/1‑140 (MQ=255)
cATGTTCATTCAGATAGCGATCCAGCTCTACCATTCCCGTCCATCGATTTTCGCACCACAGCGGAGCAAGCAGCGTCGGGCGACGGGCGCTGGCGGAAATGCGGTGGTAGAT‑‑CACTTCCGGTGGCGTATGGCGAATCAtt > 1:1799661/1‑140 (MQ=255)
cATGTTCATTCAGATAGCGATCCAGCTCGACCATTCCCGTCCATCGATTTTCGCACCACAGCGGAGCAAGCAGCGTCGGGCGACGGGCGCTGGCGGAAATGCGGTGGTAGAT‑‑CACTTCCGGTGGCGTATGGCGAATCAtt > 1:840012/1‑140 (MQ=255)
aTGTTCATTCAGATAGCGATCCAGCTCTACCATTCCCGTCCATCGATTTTCGCACCACAGCGGAGCAAGCAGCGTCGGGCGACGGGCGCTGGCGGAAATGCGGTGGTAGAT‑‑CACTTCCGGTGGCGTATGGCGAATCAttt > 2:933913/1‑140 (MQ=255)
gTTCATTCAGATAGCGATCCAGCTCTACCATTCCCGTCCATCGATTTTCGCACCACAGCGGAGCAAGCAGCGTCGGGCGACGGGCGCTGGCGGAAATGCGGTGGTAGAT‑‑CACTTCCGGTGGCGTATGGCGAATCATTtct > 2:2226507/1‑140 (MQ=255)
gTTCATTCAGATAGCGATCCAGCTCTACCATTCCCGTCCATCGATTTTCGCACCACAGCGGAGCAAGCAGCGTCGGGCGACGGGCGCTGGCGGAAATGCGGTGGTAGAT‑‑CACTTCCGGTGGCGTATGGCGAATCATTtct < 2:789670/140‑1 (MQ=255)
attcaGATAGCGATCCAGCTCTACCATTCCCGTCCATCGATTTTCGCACCACAGCGGAGCAAGCAGCGTCGGGCGACGGGCGCTGGCGGAAATGCGGTGGTAGAT‑‑CACTTCCGGTGGCGTATGGCGAATCATTTCTCCgg < 2:1190898/140‑1 (MQ=255)
ttcaGATAGCGATCCAGCTCTACCATTCCCGTCCATCGATTTTCGCACCACAGCGGAGCAAGCAGCGTCGGGCGACGGGCGCTGGCGGAAATGCGGTGGTAGAT‑‑CACTTCCGGTGGCGTATGGCGAATCATTTCTCCGGc < 2:1642261/140‑1 (MQ=255)
tcaGATAGCGATCCAGCTCTACCATTCCCGTCCATCGATTTTCGCACCACAGCGGAGCAAGCAGCGTCGGGCGACGGGCGCTGGCGGAAATGCGGTGGTAGAT‑‑CACTTCCGGTGGCGTATGGCGAATCATTTCTCCGGCa > 1:83494/1‑140 (MQ=255)
caGATAGCGATCCAGCTCTACCATTCCCGTCCATCGATTTTCGCACCACAGCGGAGCAAGCAGCGTCGGGCGACGGGCGCTGGCGGAAATGCGGTGGTAGAT‑‑CACTTCCGGTGGCGTATGGCGAATCATTTCTCCGGCAg < 1:2161780/140‑1 (MQ=255)
aGATAGCGATCCAGCTCTACCATTCCCGTCCATCGATTTTCGCACCACAGCGGAGCAAGCAGCGTCGGGCGACGGGCGCTGGCGGAAATGCGGTGGTAGAT‑‑CACTTCCGGTGGCGTATGGCGAATCATTTCTCCGGCAGt < 1:797789/140‑1 (MQ=255)
gATAGCGATCCAGCTCTACCATTCCCGTCCATCGATTTTCGCACCACAGCGGAGCAAGCAGCGTCGGGCGACGGGCGCTGGCGGAAATGCGGTGGTAGAT‑‑CACTTCCGGTGGCGTATGGCGAATCATTTCTCCGGCAGTg > 2:1696375/1‑140 (MQ=255)
aTAGCGATCCAGCTCTACCATTCCCGTCCATCGATTTTCGCACCACAGCGGAGCAAGCAGCGTCGGGCGACGGGCGCTGGCGGAAATGCGGTGGTAGAT‑‑CACTTCCGGTGGCGTATGGCGAATCATTTCTCCGGCAGTGa < 2:1927386/140‑1 (MQ=255)
aTAGCGATCCAGCTCTACCATTCCCGTCCATCGATTTTCGCACCACAGCGGAGCAAGCAGCGTCGGGCGACGGGCGCTGGCGGAAATGCGGTGGTAGAT‑‑CACTTCCGGTGGCGTATGGCGAATCATTTCTCCGGCAGTGa < 2:328938/140‑1 (MQ=255)
aTAGCGATCCAGCTCTACCATTCCCGTCCATCGATTTTCGCACCACAGCGGAGCAAGCAGCGTCGGGCGACGGGCGCTGGCGGAAATGCGGTGGTAGAT‑‑CACTTCCGGTGGCGTATGGCGAATCATTTCTCCGGCAGTGa < 2:800161/140‑1 (MQ=255)
aTAGCGATCCAGCTCTACCATTCCCGTCCATCGATTTTCGCACCACAGCGGAGCAAGCAGCGTCGGGCGACGGGCGCTGGCGGAAATGCGGTGGTAGAT‑‑CACTTCCGGTGGCGTATGGCGAATCATTTCTCCGGCAGTGa > 1:1897704/1‑140 (MQ=255)
aTAGCGATCCAGCTCTACCATTCCCGTCCATCGATTTTCGCACCACAGCGGAGCAAGCAGCGTCGGGCGACGGGCGCTGGCGGAAATGCGGTGGTAGAT‑‑CACTTCCGGTGGCGTATGGCGAATCATTTCTCCGGCAGTGa < 2:83494/140‑1 (MQ=255)
tAGCGATCCAGCTCTACCATTCCCGTCCATCGATTTTCGCACCACAGCGGAGCAAGCAGCGTCGGGCGACGGGCGCTGGCGGAAATGCGGTGGTAGAT‑‑CACTTCCGGTGGCGTATGGCGAATCATTTCTCCGGCAGTGAg > 2:1056719/1‑140 (MQ=255)
gCGATCCAGCTCTACCATTCCCGTCCATCGATTTTCGCACCACAGCGGAGCAAGCAGCGTCGGGCGACGGGCGCTGGCGGAAATGCGGTGGTAGAT‑‑CACTTCCGGTGGCGTATGGCGAATCATTTCTCCGGCAGTGAGCg < 2:140699/140‑1 (MQ=255)
ccAGCTCTACCATTCCCGTCCATCGATTTTCGCACCACAGCGGAGCAAGCAGCGTCGGGCGACGGGCGCTGGCGGAAATGCGGTGGTAGAT‑‑CACTTCCGGTGGCGTATGGCGAATCATTTCTCCGGCAGTGAGCGTGTaa < 1:1331945/140‑1 (MQ=255)
ccAGCTCTACCATTCCCGTCCATCGATTTTCGCACCACAGCGGAGCAAGCAGCGTCGGGCGACGGGCGCTGGCGGAAATGCGGTGGTAGAT‑‑CACTTCCGGTGGCGTATGGCGAATCATTTCTCCGGCAGTGAGCGTGTaa < 1:301679/140‑1 (MQ=255)
aGCTCTACCATTCCCGTCCATCGATTTTCGCACCACAGCGGAGCAAGCAGCGTCGGGCGACGGGCGCTGGCGGAAATGCGGTGGTAGATCACACTTCCGGTGGCGTATGGCGAATCATTTCTCCGGCAGTGAGCGTGTaa < 1:2174392/140‑1 (MQ=255)
aGCTCTACCATTCCCGTCCATCGATTTTCGCACCACAGCGGAGCAAGCAGCGTCGGGCGACGGGCGCTGGCGGAAATGCGGTGGTAGAT‑‑CACTTCCGGTGGCGTATGGCGAATCATTTCTCCGGCAGTGAGCGTGTAAtc > 1:2159652/1‑140 (MQ=255)
aGCTCTACCATTCCCGTCCATCGATTTTCGCACCACAGCGGAGCAAGCAGCGTCGGGCGACGGGCGCTGGCGGAAATGCGGTGGTAGAT‑‑CACTTCCGGTGGCGTATGGCGAATCATTTCTCCGGCAGTGAGCGTGTAAtc > 2:279363/1‑140 (MQ=255)
aGCTCTACCATTCCCGTCCATCGATTTTCGCACCACAGCGGAGCAAGCAGCGTCGGGCGACGGGCGCTGGCGGAAATGCGGTGGTAGAT‑‑CACTTCCGGTGGCGTATGGCGAATCATTTCTCCGGCAGTGAGCATGTAAtc > 1:18252/1‑140 (MQ=255)
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AATTCTGACAGTTACGTTATAAATTGTGTGAGAAATGCGGAATTCCCCTCAACGACCTACTCCGTTGGAGGTAGCCACGGACGTCCCAGCGCCGATCCCTGTACGCCATGTTCATTCAGATAGCGATCCAGCTCGACCATTCCCGTCCATCGATTTTCGCACCACAGCGGAGCAAGCAGCGTCGGGCGACGGGCGCTGGCGGAAATGCGGTGGTAGAT‑‑CACTTCCGGTGGCGTATGGCGAATCATTTCTCCGGCAGTGAGCGTGTAATC > NC_000913/3353065‑3353333
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
