Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F28 I1 R1
|
112 |
94.0 |
3211786 |
99.3% |
3189303 |
138.8 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,925,508 |
+C |
coding (126/1890 nt) |
mnmG ← |
5‑carboxymethylaminomethyluridine‑tRNA synthase subunit MnmG |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,925,504 | 1 | . | C | 98.0%
| 346.2
/ ‑0.7
| 99 | coding (130/1890 nt) | mnmG | 5‑carboxymethylaminomethyluridine‑tRNA synthase subunit MnmG |
| Reads supporting (aligned to +/- strand): ref base . (1/1); new base C (56/40); total (57/42) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.84e-01 |
Only 100 of 113 total aligned reads displayed.
TTGCTTGCGTTTAGTATCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCATCCACTTCTTTTACCAGATGTCCCTTCCCAATACCGCCGATCGCCGGGTTGCAGCTCATCTG‑CC‑CCAGAGTGTCGATATTGTGTGTCAAAAGCAGAGTCTGTTGACCCATACGCGCCGCGGCCATCGCGGCCTCGGTGCCTGCATGACCCCCGCCAATGATGATGACGTCAAAAGGATCCGGATAAAACATGGTGA > NC_000913/3925371‑3925638
|
ttgcttgcGTTTAGTATCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCATCCACTTCTTTTACCAGATGTCCCTTCCCAATACCGCCGATCGCCGGGTTGCAGCTCATCTG‑cc‑ccca > 1:1067045/1‑138 (MQ=255)
tgtttgcTTTTATTATCCAAACCTGGATCCCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCATCCACTTCTTTTACCAGATGTCCCTTCCCAATACCGCCGATCGCCGGGTTGCAGCTCATCTG‑cc‑cccag < 2:620294/137‑4 (MQ=255)
tgtttgcTTTTAGTATCCTAAACGGGATCCCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCATCCACTTCTTTTACCAGATGTCCCTTCCCAATACCGCCGATCGCCGGGTTGCAGCTCATCTG‑cc‑cccag < 2:592197/137‑4 (MQ=255)
tgcttgcGTTTAGTATCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCATCCACTTCTTTTACCAGATGTCCCTTCCCAATACCGCCGATCGCCGGGTTGCAGCTCATCTG‑cc‑cccag > 1:575242/1‑137 (MQ=255)
tgcttgcGTTTAGTATCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCATCCACTTCTTTTACCAGATGTCCCTTCCCAATACCGCCGATCGCCGGGTTGCAGCTCATCTG‑cc‑cccag < 1:1309346/140‑4 (MQ=255)
tgcttgcGTTTAGTATCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCATCCACTTCTTTTACCAGATGTCCCTTCCCAATACCGCCGATCGCCGGGTTGCAGCTCATCTG‑cc‑cccag < 1:1281478/140‑4 (MQ=255)
tgcttgcGTTTAGTATCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCATCCACTTCTTTTACCAGATGTCCCTTCCCAATACCGCCGATCGCCGGGTTGCAGCTCATCTG‑cc‑cccag > 1:1157289/1‑137 (MQ=255)
cttgcGTTTAGTATCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCATCCACTTCTTTTACCAGATGTCCCTTCCCAATACCGCCGATCGCCGGGTTGCAGCTCATCTG‑cc‑cccagag < 1:1331383/140‑6 (MQ=255)
tgcTTTTATTATCCTAACCGGGATCCCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCATCCACTTCTTTTCCCAGATGTCCCTTCCAAATACCGCCGATCGCCGGGTTGCAGCTCATCTGCCC‑CCAGAgtg < 2:266986/140‑1 (MQ=255)
tgcTTTTATTATCCAAAACGGGATCCCCGCCTGATCGATCGCTTTCGCCATCAGCCCGCCGAGTGCACCCCCTTCTTTTACCAGATGTCCCTTCCCAATACCGCCGATCGCCGGGTTGCAGCTCATCTGCCC‑CCAGAgtg < 2:1364512/140‑1 (MQ=255)
tgcTTTTAGTATCCTAACCTGGATCCCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCATCCACTTCTTTTACCAGATGTCCCTTCCCAATACCGCCGATCGCCGGGTTGCAGCTCATCTGCCC‑CCAGAgtg < 2:575242/140‑1 (MQ=255)
gcttttATTATCCTAAACTGGATCCCCGCCTGATCGATCGCTTTCGCCATCAGCCCGCCGAGTGCATCCACTTCTTTTACCAGATGTCCCTCCCCAATACCGCCGATCGCCGGGTTGCAGCTCATCTGCCC‑CCAGAgtgt < 2:1032365/137‑1 (MQ=255)
ttttATTACCCAAAACGGGATCCCCGCCTGATCGATCGTTTTCCCCATCAGACCGCCGAGTGCATCCACTTCTTTTACCAGATGTCCCTTCCAAATACCGCCGATCGCCGGGTTGCAGCTCATCTGCCC‑CCAGAGTGTCg < 2:201794/139‑1 (MQ=255)
gTTTAGTATCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCATCCACTTCTTTTACCAGATGTCCCTTCCCAATACCGCCGATCGCCGGGTTGCAGCTCATCTGCCC‑CCAGAGTGTCg > 2:1512436/1‑140 (MQ=255)
tttATTACCCAAACCGGGATCCCCGCCTGATCGACCGTTTCCCCCATCAGACCGCCGAGTGCATCCTCTTCTTTTACCAGATGCCCCTTCCAAATACCGCCGATCGCCGGGTTGCAGCTCATCTGCCC‑CCAGAGTGTCGa < 2:1565595/140‑1 (MQ=255)
ttAGTATCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCATCCACTTCTTTTACCAGATGTCCCTTCCCAATACCGCCGATCGCCGGGTTGCAGCTCATCTGCCC‑CCAGAGTGTCGat > 2:1361137/1‑140 (MQ=255)
aGTATCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCATCCACTTCTTTTACCAGATGTCCCTTCCCAATACCGCCGATCGCCGGGTTGCAGCTCATCTGCCC‑CCAGGGGGTCGatat > 1:1307933/1‑140 (MQ=255)
aGTATCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGCGCATCCACTTCTTTTACCAGATGTCCCTTCCCAATACCGCCGATCGCCGGGTTGCAGCTCATCTGCCC‑CCAGAGTGTCGatat > 1:94320/1‑140 (MQ=255)
tCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCATCCACTTCTTTTACCAGATGTCCCTTCCCAATACCGCCGATCGCCGGGTTGCAGCTCATCTGCCC‑CCAGAGTGTCGATATtgtg > 1:645516/1‑140 (MQ=255)
tAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCATCCACTTCTTTTACCAGATGTCCCTTCCCAATACCGCCGATCGCCGGGTTGCAGCTCATCTGCCC‑CCAGAGTGTCGATATTgtgtgt > 1:407637/1‑140 (MQ=255)
aaCTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCATCCACTTCTTTTACCAGATGTCCCTTCCCAATACCGCCGATCGCCGGGTTGCAGCTCATCTGCCC‑CCAGAGTGTCGATATTGTGTGTCa > 1:32644/1‑140 (MQ=255)
aaCTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCATCCACTTCTTTTACCAGATGTCCCTTCCCAATACCGCCGATCGCCGGGTTGCAGCTCATCTG‑CCACCAGAGTGTCGATATTGTGTGTCa > 1:907606/1‑140 (MQ=255)
atgggATCCCCGCCTGATCGATCGTTTTCGCCATCAGCCCGCCGAGTGCATCCACTTCTTTTACCAGATGTCCCTTCCCAATACCGCCGATCGCCGGGTTGCAGCTCATCTGCCC‑CCAGAGTGTCGATATTGTGTGTCaa < 2:1002601/137‑1 (MQ=255)
aCTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCATCCACTTCTTTTACCAGATGTCCCTTCCCAATACCGCCGATCGCCGGGTTGCAGCTCATCTGCCC‑CCAGAGTGTCGATATTGTGTGTCaa > 2:1445147/1‑140 (MQ=255)
cTGGATCCCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCATCCACTTCTTTTACCAGATGTCCCTTCCCAATACCGCCGATCGCCGGGTTGCAGCTCATCTGCCC‑CCAGAGTGTCGATATTGTGTGTCaaa < 1:1410398/140‑1 (MQ=255)
tGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCATCCACTTCTTTTACCAGATGTCCCTTCCCAATACCGCCGATCGCCGGGTTGCAGCTCATCTGCCC‑CCAGAGTGTCGATATTGTGTGTCaaaa > 1:454874/1‑140 (MQ=255)
gATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCATCCACTTCTTTTACCAGATGTCCCTTCCCAATACCGCCGATCGCCGGGTTGCAGCTCATCTGCCC‑CCAGAGTGTCGATATTGTGTGTCAAAAGc > 2:952249/1‑140 (MQ=255)
gATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCATCCACTTCTTTTACCAGATGTCCCTTCCCAATACCGCCGATCGCCGGGTTGCAGCTCATCTGCCC‑CCAGAGTGTCGATATTGTGTGTCAAAAGc > 2:1300719/1‑140 (MQ=255)
gATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCATCCACTTCTTTTACCAGATGTCCCTTCCCAATACCGCCGATCGCCGGGTTGCAGCTCATCTGCCC‑CCAGAGTGTCGATATTGTGTGTCAAAAGc > 2:501876/1‑140 (MQ=255)
gATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCATCCACTTCTTTTACCAGATGTCCCTTCCCAATACCGCCGATCGCCGGGTTGCAGCTCATCTGCCC‑CCAGAGTGTCGATATTGTGTGTCAAAAGc > 2:157933/1‑140 (MQ=255)
gATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCATCCACTTCTTTTACCAGATGTCCCTTCCCAATACCGCCGATCGCCGGGTTGCAGCTCATCTGCCC‑CCAGAGTGTCGATATTGTGTGTCAAAAGc > 1:157930/1‑140 (MQ=255)
gATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCATCCACTTCTTTTACCAGATGTCCCTTCCCAATACCGCCGATCGCCGGGTTGCAGCTCATCTGCCC‑CCAGAGTGTCGATATTGTGTGTCAAAAGc > 1:1141911/1‑140 (MQ=255)
tACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCATCCACTTCTTTTACCAGATGTCCCTTCCCAATACCGCCGATCGCCGGGTTGCAGCTCATCTGCCC‑CCAGAGTGTCGATATTGTGTGTCAAAAGCag > 2:668482/1‑140 (MQ=255)
ccccGCCTGATCGACCGTTTTCGCCACCAGCCCGCCGAGGGCATCCTCTTCTTTTCCCATATGTCCCTTCCCAATACCGCCGATCGCCGGGTTGCAGCTCATCTGTCC‑CCAGAGTGTCGATATTGTGTGTCAAAAGCaga < 2:645516/139‑1 (MQ=255)
ccGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCATCCACTTCTTTTACCAGATGTCCCTTCCCAATACCGCCGATCGCCGGGTTGCAGCTCATCTGCCC‑CCAGAGTGTCGATATTGTGTGTCAAAAGCAGAGt > 2:607483/1‑140 (MQ=255)
ccTGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCATCCACTTCTTTTACCAGATGTCCCTTCCCAATACCGCCGATCGCCGGGTTGCAGCTCATCTGCCC‑CCAGAGTGTCGATATTGTGTGTCAAAAGCAGAGTCTg < 1:1351352/140‑1 (MQ=255)
ccTGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCATCCACTTCTTTTACCAGATGTCCCTTCCCAATACCGCCGATCGCCGGGTTGCAGCTCATCTGCCC‑CCAGAGTGTCGATATTGTGTGTCAAAAGCAGAGTCTg < 1:1512436/140‑1 (MQ=255)
cTGACCGATCCTTTTCGCCATCAGCCCGCCGAGTGCACCCTTTTCTTTTACCAGATGTCCCTCCCCAATACCGCCGATCGCCGGGTTGCAGCTCATCTGCCC‑CCAGAGTGTCGATATTGTGTGTCAAAAGCATAGTCTGt < 2:1157289/140‑1 (MQ=255)
tGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCATCCACTTCTTTTACCAGATGTCCCTTCCCAATACCGCCGATCGCCGGGTTGCAGCTCATCTGCCC‑CCAGAGTGTCGATATTGTGTGTCAAAAGCag > 2:1457918/1‑132 (MQ=255)
tGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCATCCACTTCTTTTACCAGATGTCCCTTCCCAATACCGCCGATCGCCGGGTTGCAGCTCATCTGCCC‑CCAGAGTGTCGATATTGTGTGTCAAAAGCAGAGTCTGtt > 2:1585228/1‑140 (MQ=255)
tGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCATCCACTTCTTTTACCAGATGTCCCTTCCCAATACCGCCGATCGCCGGGTTGCAGCTCATCTGCCC‑CCAGAGTGTCGATATTGTGTGTCAAAAGCAGAGTCTGtt < 2:615433/140‑1 (MQ=255)
tGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCATCCACTTCTTTTACCAGATGTCCCTTCCCAATACCGCCGATCGCCGGGTTGCAGCTCATCTGCCC‑CCAGAGTGTCGATATTGTGTGTCAAAAGCAGAGTCTGtt > 1:615433/1‑140 (MQ=255)
gatcgatcGCTTTCGCCATCAGACCGCCGAGTGCATCCACTTCTTTTACCAGATGTCCCTTCCCAATACCGCCGATCGCCGGGTTGCAGCTCATCTGCCC‑CCAGAGTGTCGATATTGTGTGTCAAAAGCAGAGTCTGTTg > 1:737709/1‑140 (MQ=255)
atcgatcgCTTTCGCCATCAGACCGCCGAGTGCATCCACTTCTTTTACCAGATGTCCCTTCCCAATACCGCCGATCGCCGGGTTGCAGCTCATCTGCCC‑CCAGAGTGTCGATATTGTGTGTCAAAAGCAGAGTCTGTTGa > 2:649412/1‑140 (MQ=255)
atcgatcgCTTTCGCCATCAGACCGCCGAGTGCATCCACTTCTTTTACCAGATGTCCCTTCCCAATACCGCCGATCGCCGGGTTGCAGCTCATCTGCCC‑CCAGAGTGTCGATATTGTGTGTCAAAAGCAGAGTCTGTTGa > 1:1597488/1‑140 (MQ=255)
tcgatcgCTTTCGCCATCAGACCGCCGAGTGCATCCACTTCTTTTACCAGATGTCCCTTCCCAATACCGCCGATCGCCGGGTTGCAGCTCATCTGCCC‑CCAGAGTGTCGATATTGTGTGTCAAAAGCAGAGTCTGTTGAc < 1:621203/140‑1 (MQ=255)
gatcgCTTTCGCCATCAGACCGCCGAGTGCATCCACTTCTTTTACCAGATGTCCCTTCCCAATACCGCCGATCGCCGGGTTGCAGCTCATCTGCCC‑CCAGAGTGTCGATATTGTGTGTCAAAAGCAGAGTCTGtt < 1:456834/135‑1 (MQ=255)
gatcgCTTTCGCCATCAGACCGCCGAGTGCATCCACTTCTTTTACCAGATGTCCCTTCCCAATACCGCCGATCGCCGGGTTGCAGCTCATCTGCCC‑CCAGAGTGTCGATATTGTGTGTCAAAAGCAGAGTCTGTTGAccc < 1:841593/140‑1 (MQ=255)
tcgCTTTCGCCATCAGACCGCCGAGTGCATCCACTTCTTTTACCAGATGTCCCTTCCCAATACCGCCGATCGCCGGGTTGCAGCTCATCTGCCC‑CCAGAGTGTCGATATTGTGTGTCAAAAGCaga < 1:1383896/126‑1 (MQ=255)
tcgCTTTCGCCATCAGACCGCCGAGTGCATCCACTTCTTTTACCAGATGTCCCTTCCCAATACCGCCGATCGCCGGGTTGCAGCTCATCTGCCC‑CCAGAGTGTCGATATTGTGTGTCAAAAGCaga > 2:1383896/1‑126 (MQ=255)
cgCTTTCGCCATCAGACCGCCGAGTGCATCCACTTCTTTTACCAGATGTCCCTTCCCAATACCGCCGATCGCCGGGTTGCAGCTCATCTGCCC‑CCAGAGTGTCGATATTGTGTGTCAAAAGCAGAGTCTGTTGACCCATa < 1:1361137/140‑1 (MQ=255)
gCTTTCGCCATCAGACCGCCGAGTGCATCCACTTCTTTTACCAGATGTCCCTTCCCAATACCGCCGATCGCCGGGTTGCAGCTCATCTGCCC‑CCAGAGTGTCGATATTGTGTGTCAAAAGCAGAGTCTGTTGACCCATAc > 2:1514107/1‑140 (MQ=255)
cgcggAGTGCTCCCTCTTTTTTTCCCAGATGCCCCTCCCCAATACCGCCGATCGCCGGGTTGCAGCTCATCTGCCC‑CCAGAGTGTCGATATTGTGTGTCAAAAGCAGAGTCTGTTGACCCATACGCGCCGCGGCCATcgc < 2:407637/140‑1 (MQ=255)
cgccgAGTGCATCCACTTCTTTTACCAGATGTCCCTTCCCAATACCGCCGATCGCCGGGTTGCAGCTCATCTGCCC‑CCAGAGTGTCGATATTGTGTGTCAAAAGCAGAGTCTGTTGACCCATACGCGCCGCGGCCATcgc > 2:449291/1‑140 (MQ=255)
cccgAGTGCATCCTCTTCTTTTCCCAGATGTCCCTCCCCAATACCGCCGATCGCCGGGTTGCAGCTCATCTG‑CCACCAGAGTGTCGATATTGTGTGTCAAAAGCAGAGTCTGTTGACCCATACGCGCCGCGACCATcgcg < 2:907606/139‑1 (MQ=255)
tgtggctCCTCTTCTTTTCCCAGATGCCCCCCACCAATGCCGCCGATCGCCGGGTTGCAGCTCATCTGCCC‑CCAGAGTGTCGATATTGTGTGTCAAAAGCAGAGTCTGTTGACCCATACGCGCCGCGGCCATCGCGGCCt < 2:1005175/134‑1 (MQ=255)
tGCATCCACTTCTTTTACCAGATGTCCCTTCCCAATACCGCCGATCGCCGGGTTGCAGCTCATCTGCCC‑CCAGAGTGTCGATATTGTGTGTCAAAAGCAGAGTCTGTTGACCCATACGCGCCGCGGCCATCGCGGCCTCg > 1:1249251/1‑140 (MQ=255)
cacccccttcttTTCCCAGATGTCCCTCCCCAATTCCGCCGATCGCCGGGTTGCAGCTCATCTGCCC‑CCAGAGTGTCGATATTGTGTGTCAAAAGCAGAGTCTGTTGACCCATACGCGCCGCGGCCATCGCGGCCTCGGt < 1:1182809/134‑1 (MQ=255)
aTCCACTTCTTTTACCAGATGTCCCTTCCCAATACCGCCGATCGCCGGGTTGCAGCTCATCTGCCC‑CCAGAGTGTCGATATTGTGTGTCAAAAGCAGAGTCTGTTGACCCATACGCGCCGCGGCCATCGCGGCCTCGGTg > 2:1325753/1‑140 (MQ=255)
tCCATTTCTTTCACCAGCTGTCCCTTCCCAAGACCGCCGATCGCCGGGTTGCAGCTCATCTGCCC‑CCAGAGTGTCGATATTGTGTGTCAAAAGCAGAGTCTGTTGACCCATACGCGCCGCGGCCATCGCGGCCTCGGTGc < 2:94320/140‑1 (MQ=255)
tCCACTTCTTTTACCAGATGTCCCTTCCCAATGCCGCCGATCGCCGGGTTGCAGCTCATCTGCCC‑CCAGAGTGTCGATATTGTGTGTCAAAAGCAGAGTCTGTTGACCCATACGCGCCGCGGCCATCGCGGCCTCGGTGc < 2:62954/140‑1 (MQ=255)
tCCACTTCTTTTACCAGATGTCCCTTCCCAATACCGCCGATCGCCGGGTTGCAGCTCATCTGCCC‑CCAGAGTGTCGATATTGTGTGTCAAAAGCAGAGTCTGTTGACCCATACGCGCCGCGGCCATCGCGGCCTCGGTGc < 1:157933/140‑1 (MQ=255)
ccccctttttTTACCAGATGCCCCTCCCAAATACCGCCGATCGCCGGGTTGCAGCTCATCTGCCC‑CCAGAGTGTCGATATTGTGTGTCAAAAGCAGAGTCTGTTGACCCATACGCGCCGCGGCCATCGCGGCCTCGGTGc < 2:1597488/136‑1 (MQ=255)
ccACTTCTTTTACCAGATGTCCCTTCCCAATACCGCCGATCGCCGGGTTGCAGCTCATCTGCCC‑CCAGAGTGTCGATATTGTGTGTCAAAAGCAGAGTCTGTTGACCCATACGCGCCGCGGCCATCGCGGCCTCGGTGcc > 2:685558/1‑140 (MQ=255)
cttcttTTACCAGATGTCCCTTCCCAATACCGCCGATCGCCGGGTTGCAGCTCATCTGCCC‑CCAGAGTGTCGATATTGTGTGTCAAAAGCAGAGTCTGTTGACCCATACGCGCCGCGGCCATCGCGGCCTc > 1:59840/1‑131 (MQ=255)
cttcttTTACCAGATGTCCCTTCCCAATACCGCCGATCGCCGGGTTGCAGCTCATCTGCCC‑CCAGAGTGTCGATATTGTGTGTCAAAAGCAGAGTCTGTTGACCCATACGCGCCGCGGCCATCGCGGCCTc < 2:59840/131‑1 (MQ=255)
ttcttTTACCAGATGTCCCTTCCCAATACCGCCGATCGCCGGGTTGCAGCTCATCTGCCC‑CCAGAGTGTCGATATTGTGTGTCAAAAGCAGAGTCTGTTGACCCATACGCGCCGCGGCCATCGCGGCCTCGGTGCCTGCa < 2:157930/140‑1 (MQ=255)
ttcttTTACCAGATGTCCCTTCCCAATACCGCCGATCGCCGGGTTGCAGCTCATCTGCCC‑CCAGAGTGTCGATATTGTGTGTCAAAAGCAGAGTCTGTTGACCCATACGCGCCGCGGCCATCGCGGCCTCGGTGCCTGCa > 1:559621/1‑140 (MQ=255)
ttcttTTACCAGATGTCCCTCCCCAATACCGCCGATCGCCGGGTTGCAGCTCATCTGCCC‑CCAGAGTGTCGATATTGTGTGTCAAAAGCAGAGTCTGTTGACCCATACGCGCCGCGGCCATCGCGGCCTCGGTGCCTGCa < 1:685558/140‑1 (MQ=255)
agttgccccTCCCAAATCCCGCCGATCGCCGGGTTGCAGCTCATCTGCCC‑CCAGAGTGTCGATATTGTGTGTCAAAAGCAGAGTCTGTTGACCCATACGCGCCGCGGCCATCGCGGCCTCGGTGCCTGCATGACCCCCGc < 2:320435/134‑1 (MQ=255)
aGATGCCCCTCCCAAATACCGCCGATCGCCGGGTTGCAGCTCATCTGCCC‑CCAGAGTGTCGATATTGTGTGTCAAAAGCAGAGTCTGTTGACCCATACGCGCCGCGGCCATCGCGGCCTCGGTGCCTGCATGACCCCCGc < 1:43788/140‑1 (MQ=255)
aTGTCCCTTCCCAATACCGCCGATCGCCGGGTTGCAGCTCATCTGCCC‑CCAGAGTGTCGATATTGTGTGTCAAAAGCAGAGTCTGTTGACCCATACGCGCCGCGGCCATCGCGGCCTCGGTGCCTGCATGACCCCCGCCa > 1:282063/1‑140 (MQ=255)
tCCCAATACCGCCGATCGCCGGGTTGCAGCTCATCTGCCC‑CCAGAGTGTCGATATTGTGTGTCAAAAGCAGAGTCTGTTGACCCATACGCGCCGCGGCCATCGCGGCCTCGGTGCCTGCATGACCCCCGCCAatgatgat < 1:952249/140‑1 (MQ=255)
aaTACCGCCGATCGCCGGGTTGCAGCTCATCTGCCC‑CCAGAGTGTCGATATTGTGTGTCAAAAGCAGAGTCTGTTGACCCATACGCGCCGCGGCCATCGCGGCCTCGGTGCCTGCATGACCCCCGCCAATGATGATGACg > 2:668836/1‑140 (MQ=255)
aaTACCGCCGATCGCCGGGTTGCAGCTCATCTGCCC‑CCAGAGTGTCGATATTGTGTGTCAAAAGCAGAGTCTGTTGACCCATACGCGCCGCGGCCATCGCGGCCTCGGTGCCTGCATGACCCCCGCCAATGATGATGACg < 1:501876/140‑1 (MQ=255)
aTACCGCCGATCGCCGGGTTGCAGCTCATCTGCCC‑CCAGAGTGTCGATATTGTGTGTCAAAAGCAGAGTCTGTTGACCCATACGCGCCGCGGCCATCGCGGCCTCGGTGCCTGCATGACCCCCGCCAATGATGATGACGt > 1:1032089/1‑140 (MQ=255)
aTACCGCCGATCGCCGGGTTGCAGCTCATCTGCCC‑CCAGAGTGTCGATATTGTGTGTCAAAAGCAGAGTCTGTTGACCCATACGCGCCGCGGCCATCGCGGCCTCGGTGCCTGCATGACCCCCGCCAATGATGATGACGt > 2:469739/1‑140 (MQ=255)
aTACCGCCGATCGCCGGGTTGCAGCTCATCTGCCC‑CCAGAGTGTCGATATTGTGTGTCAAAAGCAGAGTCTGTTGACCCATACGCGCCGCGGCCATCGCGGCCTCGGTGCCTGCATGACCCCCGCCAATGATGATGACGt > 2:663255/1‑140 (MQ=255)
cgccgATCGCCGGGTTGCAGCTCATCTGCCC‑CCAGAGTGTCGATATTGTGTGTCAAAAGCAGAGTCTGTTGACCCATACGCGCCGCGGCCATCGCGGCCTCGGTGCCTGCATGACCCCCGCCAATGATGATGACGTCaaa > 2:822848/1‑140 (MQ=255)
ccgATCGCCGGGTTGCAGCTCATCTGCCC‑CCAGAGTGTCGATATTGTGTGTCAAAAGCAGAGTCTGTTGACCCATACGCGCCGCGGCCATCGCGGCCTCGGTGCCTGCATGACCCCCGCCAatgatga < 1:273989/128‑1 (MQ=255)
ccgATCGCCGGGTTGCAGCTCATCTGCCC‑CCAGAGTGTCGATATTGTGTGTCAAAAGCAGAGTCTGTTGACCCATACGCGCCGCGGCCATCGCGGCCTCGGTGCCTGCATGACCCCCGCCAATGATGATGACGTCAAAAg > 2:946402/1‑140 (MQ=255)
ccgATCGCCGGGTTGCAGCTCATCTGCCC‑CCAGAGTGTCGATATTGTGTGTCAAAAGCAGAGTCTGTTGACCCATACGCGCCGCGGCCATCGCGGCCTCGGTGCCTGCATGACCCCCGCCAATGATGATGACGTCAAAAg > 2:372853/1‑140 (MQ=255)
ccgATCGCCGGGTTGCAGCTCATCTGCCC‑CCAGAGTGTCGATATTGTGTGTCAAAAGCAGAGTCTGTTGACCCATACGCGCCGCGGCCATCGCGGCCTCGGTGCCTGCATGACCCCCGCCAATGATGATGACGTCAAAAg > 1:577824/1‑140 (MQ=255)
ccgATCGCCGGGTTGCAGCTCATCTGCCC‑CCAGAGTGTCGATATTGTGTGTCAAAAGCAGAGTCTGTTGACCCATACGCGCCGCGGCCATCGCGGCCTCGGTGCCTGCATGACCCCCGCCAATGATGATGACGTCAAAAg > 1:1103412/1‑140 (MQ=255)
ccgATCGCCGGGTTGCAGCTCATCTGCCC‑CCAGAGTGTCGATATTGTGTGTCAAAAGCAGAGTCTGTTGACCCATACGCGCCGCGGCCATCGCGGCCTCGGTGCCTGCATGACCCCCGCCAATGATGATGACGTCAAAAg > 2:1027884/1‑140 (MQ=255)
aTCGCCGGGTTGCAGCTCATCTGCCC‑CCAGAGTGTCGATATTGTGTGTCAAAAGCAGAGTCTGTTGACCCATACGCGCCGCGGCCATCGCGGCCTCGGTGCCTGCATGACCCCCGCCAATGATGATGACGTCAAAAGGAt > 1:997628/1‑140 (MQ=255)
aTCGCCGGGTTGCAGCTCATCTGCCC‑CCAGAGTGTCGATATTGTGTGTCAAAAGCAGAGTCTGTTGACCCATACGCGCCGCGGCCATCGCGGCCTCGGTGCCTGCATGACCCCCGCCAATGATGATGACGTCAAAAGGAt > 2:242553/1‑140 (MQ=255)
aTCGCCGGGTTGCAGCTCATCTGCCC‑CCAGAGTGTCGATATTGTGTGTCAAAAGCAGAGTCTGTTGACCCATACGCGCCGCGGCCATCGCGGCCTCGGTGCCTGCATGACCCCCGCCAATGATGATGACGTCAAAAGGAt < 1:1325753/140‑1 (MQ=255)
tCGCCGGGTTGCAGCTCATCTGCCC‑CCAGAGTGTCGATATTGTGTGTCAAAAGCAGAGTCTGTTGACCCATACGCGCCGCGGCCATCGCGGCCTCGGTGCCTGCATGACCCCCGCCAATGATGATGACGTCAAAAGGATc < 1:1520423/140‑1 (MQ=255)
tCGCCGGGTTGCAGCTCATCTGCCC‑CCAGAGTGTCGATATTGTGTGTCAAAAGCAGAGTCTGTTGACCCATACGCGCCGCGGCCATCGCGGCCTCGGTGCCTGCATGACCCCCGCCAATGATGATGACGTCAAAAGGATc < 1:1514107/140‑1 (MQ=255)
cGCCGGGTTGCAGCTCATCTGCCC‑CCAGAGTGTCGATATTGTGTGTCAAAAGCAGAGTCTGTTGACCCATACGCGCCGCGGCCATCGCGGCCTCGGTGCCTGCATGACCCCCGCCAATGATGATGACGTCAAAAGGATcc > 2:42704/1‑140 (MQ=255)
cGGGTTGCAGCTCATCTGCCC‑CCAGAGTGTCGATATTGTGTGTCAAAAGCAGAGTCTGTTGACCCATACGCGCCGCGGCCATCGCGGCCTCGGTGCCTGCATGACCCCCGCCAATGATGATGACGTCAAAAGGATCCGGa > 2:765027/1‑140 (MQ=255)
ggTTGCAGCTCATCTGCCC‑CCAGAGTGTCGATATTGTGTGTCAAAAGCAGAGTCTGTTGACCCATACGCGCCGCGGCCATCGCGGCCTCGGTGCCTGCATGACCCCCGCCAATGATGATGACGTCAAAAGGATCCGGATa > 2:91923/1‑140 (MQ=255)
ggTTGCAGCTCATCTGCCC‑CCAGAGTGTCGATATTGTGTGTCAAAAGCAGAGTCTGTTGACCCATACGCGCCGCGGCCATCGCGGCCTCGGTGCCTGCATGACCCCCGCCAATGATGATGACGTCAAAAGGATCCGGATa > 2:387032/1‑140 (MQ=255)
tGCAGCTCATCTGCCC‑CCAGAGTGTCGATATTGTGTGTCAAAAGCAGAGTCTGTTGACCCATACGCGCCGCGGCCATCGCGGCCTCGGTGCCTGCATGACCCCCGCCAATGATGATGACGTCAAAAGGATCCGGATaaaa < 1:668482/140‑1 (MQ=255)
cAGCTCATCTGCCC‑CCAGAGTGTCGATATTGTGTGTCAAAAGCAGAGTCTGTTGACCCATACGCGCCGCGGCCATCGCGGCCTCGGTGCCTGCATGACCCCCGCCAATGATGATGACGTCAAAAGGATCCGGGTAAAACa < 2:454874/140‑1 (MQ=255)
cAGCTCATCTGCCC‑CCAGAGTGTCGATATTGTGTGTCAAAAGCAGAGTCTGTTGACCCATACGCGCCGCGGCCATCGCGGCCTCGGTGCCTGCATGACCCCCGCCAATGATGATGACGTCAAAAGGATCCGGATAAAACa < 1:607483/140‑1 (MQ=255)
gCTCATCTGCCC‑CCAGAGTGTCGATATTGTGTGTCAAAAGCAGAGTCTGTTGACCCATACGCGCCGCGGCCATCGCGGCCTCGGTGCCTGCATGACCCCCGCCAATGATGATGACGTCAAAAGGATCCGGATAAAACATg > 1:435239/1‑140 (MQ=255)
aTCTGCCC‑CCAGAGTGTCGATATTGTGTGTCAAAAGCAGAGTCTGTTGACCCATACGCGCCGCGGCCATCGCGGCCTCGGTGCCTGCATGACCCCCGCCAATGATGATGACGTCAAAAGGATCCGGATAAAACATGGTGa < 2:737709/140‑1 (MQ=255)
aTCTGCCC‑CCAGAGTGTCGATATTGTGTGTCAAAAGCAGAGTCTGTTGACCCATACGCGCCGCGGCCATCGCGGCCTCGGTGCCTGCATGACCCCCGCCAATGATGATGACGTCAAAAGGATCCGGATAAAACATGGTGa < 1:469739/140‑1 (MQ=255)
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TTGCTTGCGTTTAGTATCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCATCCACTTCTTTTACCAGATGTCCCTTCCCAATACCGCCGATCGCCGGGTTGCAGCTCATCTG‑CC‑CCAGAGTGTCGATATTGTGTGTCAAAAGCAGAGTCTGTTGACCCATACGCGCCGCGGCCATCGCGGCCTCGGTGCCTGCATGACCCCCGCCAATGATGATGACGTCAAAAGGATCCGGATAAAACATGGTGA > NC_000913/3925371‑3925638
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
