Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A11 F28 I1 R1	224	87.5	2960670	99.3%	2939945	138.5

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,206,742	T→C	N264S (AAC→AGC)	purH ←	bifunctional AICAR transformylase/IMP cyclohydrolase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,206,742	0	T	C	100.0%	246.6 / NA	71	N264S (AAC→AGC)	purH	bifunctional AICAR transformylase/IMP cyclohydrolase
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (30/41); total (30/41)

GCGCGATCGTAAGCATCAAGAATGGAATTGCCGATAGCCACGCCGCAAGGGTTGGCGTGCTTCACAATCACACATGCCGGCTCGGCGAACTCTTTCACGCACTCCAGCGCCGCATCGGTATCGGCGATGTTGTTATAAGAGAGGGCTTTACCCTGAACCTGGGTTGCGGTAGCAACGGAGGCTTCTTTCACATTCTCTTCTATATAGAAGGCAGCCTGCTGGTGGCTGTTCTCGCCGTAACGCATATCCAGCTTCT  >  NC_000913/4206613‑4206868

gcgcgATCGTAAGCATCAAGAATGGAATTGCCGATAGCCACGCCGCAAGGGTTGGCGTGCTTCACAATCACACATGCCGGCTCGGCGAACTCTTTCACGCACTCCAGCGCCGCATCGGTATCGGCGATGCTGTTATAaga                                                                                                                      <  1:351048/140‑1 (MQ=255)

  gcgATCGTAAGCATCAAGAATGGAATTGCCGATAGCCACGCCGCAAGGGTTGGCGTGCTTCACAATCACACATGCCGGCTCGGCGAACTCTTTCACGCACTCCAGCGCCGCATCGGTATCGGCGATGCTGTTATAagaga                                                                                                                    <  2:1471116/140‑1 (MQ=255)

  gcgATCGTAAGCATCAAGAATGGAATTGCCGATAGCCACGCCGCAAGGGTTGGCGTGCTTCACAATCACACATGCCGGCTCGGCGAACTCTTTCACGCACTCCAGCGCCGCATCGGTATCGGCGATGCTGTTATAagaga                                                                                                                    >  1:33346/1‑140 (MQ=255)

       cGTAAGCATCAAGAATGGAATTGCCGATAGCCACGCCGCAAGGGTTGGCGTGCTTCACAATCACACATGCCGGCTCGGCGAACTCTTTCACGCACTCCAGCGCCGCATCGGTATCGGCGATGCTGTTATAAGAGAGGGCt                                                                                                               <  2:481457/140‑1 (MQ=255)

        gTAAGCATCAAGAATGGAATTGCCGATAGCCACGCCGCAAGGGTTGGCGTGCTTCACAATCACACATGCCGGCTCGGCGAACTCTTTCACGCACTCCAGCGCCGCATCGGTATCGGCGATGCTGTTATAAGAGAGGGCtt                                                                                                              <  2:691334/140‑1 (MQ=255)

        gTAAGCATCAAGAATGGAATTGCCGATAGCCACGCCGCAAGGGTTGGCGTGCTTCACAATCACACATGCCGGCTCGGCGAACTCTTTCACGCACTCCAGCGCCGCATCGGTATCGGCGATGCTGTTATAAGAGAGGGCtt                                                                                                              <  1:913386/140‑1 (MQ=255)

             cATCAAGAATGGAATTGCCGATAGCCACGCCGCAAGGGTTGGCGTGCTTCACAATCACACATGCCGGCTCGGCGAACTCTTTCACGCACTCCAGCGCCGCATCGGTATCGGCGATGCTGTTATAAGAGAGGGCTTTAccc                                                                                                         <  2:1225783/140‑1 (MQ=255)

             cATCAAGAATGGAATTGCCGATAGCCACGCCGCAAGGGTTGGCGTGCTTCACAATCACACATGCCGGCTCGGCGAACTCTTTCACGCACTCCAGCGCCGCATCGGTATCGGCGATGCTGTTATAAGAGAGGGCTTTAccc                                                                                                         <  2:541290/140‑1 (MQ=255)

             cATCAAGAATGGAATTGCCGATAGCCACGCCGCAAGGGTTGGCGTGCTTCACAATCACACATGCCGGCTCGGCGAACTCTTTCACGCACTCCAGCGCCGCATCGGTATCGGCGATGCTGTTATAAGAGAGGGCTTTAccc                                                                                                         <  2:240190/140‑1 (MQ=255)

                cAAGAATGGAATTGCCGATAGCCACGCCGCAAGGGTTGGCGTGCTTCACAATCACACATGCCGGCTCGGCGAACTCTTTCACGCACTCCAGCGCCGCATCGGTATCGGCGATGCTGTTATAAGAGAGGGCTTTACCCTGa                                                                                                      >  1:586739/1‑140 (MQ=255)

                cAAGAATGGAATTGCCGATAGCCACGCCGCAAGGGTTGGCGTGCTTCACAATCACACATGCCGGCTCGGCGAACTCTTTCACGCACTCCAGCGCCGCATCGGTATCGGCGATGCTGTTATAAGAGAGGGCTTTACCCTGa                                                                                                      >  1:283100/1‑140 (MQ=255)

                cAAGAATGGAATTGCCGATAGCCACGCCGCAAGGGTTGGCGTGCTTCACAATCACACATGCCGGCTCGGCGAACTCTTTCACGCACTCCAGCGCCGCATCGGTATCGGCGATGCTGTTATAAGAGAGGGCTTTACCCTGa                                                                                                      >  1:1169134/1‑140 (MQ=255)

                cAAGAATGGAATTGCCGATAGCCACGCCGCAAGGGTTGGCGTGCTTCACAATCACACATGCCGGCTCGGCGAACTCTTTCACGCACTCCAGCGCCGCATCGGTATCGGCGATGCTGTTATAAGAGAGGGCTTTACCCTGa                                                                                                      >  1:116192/1‑140 (MQ=255)

                   gAATGGAATTGCCGATAGCCACGCCGCAAGGGTTGGCGTGCTTCACAATCACACATGCCGGCTCGGCGAACTCTTTCACGCACTCCAGCGCCGCATCGGTATCGGCGATGCTGTTATAAGAGAGGGCTTTACCCTGAAcc                                                                                                   >  1:448273/1‑140 (MQ=255)

                   gAATGGAATTGCCGATAGCCACGCCGCAAGGGTTGGCGTGCTTCACAATCACACATGCCGGCTCGGCGAACTCTTTCACGCACTCCAGCGCCGCATCGGTATCGGCGATGCTGTTATAAGAGAGGGCTTTACCCTGAAcc                                                                                                   <  1:645856/140‑1 (MQ=255)

                       ggAATTGCCGATAGCCACGCCGCAAGGGTTGGCGTGCTTCACAATCACACATGCCGGCTCGGCGAACTCTTTCACGCACTCCAGCGCCGCATCGGTATCGGCGATGCTGTTATAAGAGAGGGCTTTACCCTGAACCTggg                                                                                               >  1:736218/1‑140 (MQ=255)

                        gAATTGCCGATAGCCACGCCGCAAGGGTTGGCGTGCTTCACAATCACACATGCCGGCTCGGCGAACTCTTTCACGCACTCCAGCGCCGCATCGGTATCGGCGATGCTGTTATAAGAGAGGGCTTTACCCTGAACCTGGGt                                                                                              >  2:755968/1‑140 (MQ=255)

                           ttGCCGATAGCCACGCCGCAAGGGTTGGCGTGCTTCACAATCACACATGCCGGCTCGGCGAACTCTTTCACGCACTCCAGCGCCGCATCGGTATCGGCGATGCTGTTATAAGAGAGGGCTTTACCCTGAACCTGGGTTGc                                                                                           >  1:1306023/1‑140 (MQ=255)

                            tGCCGATAGCCACGCCGCAAGGGTTGGCGTGCTTCACAATCACACATGCCGGCTCGGCGACCTCGTTCACGCACTCCAGCGCCGCATCGGTATCGGCGATGCTGTTATAAGAGAGGGCTTTACCCTGAACCTGGGTTGCg                                                                                          <  2:1207602/140‑1 (MQ=255)

                            tGCCGATAGCCACGCCGCAAGGGTTGGCGTGCTTCACAATCACACATGCCGGCTCGGCGAACTCTTTCACGCACTCCAGCGCCGCATCGGTATCGGCGATGCTGTTATAAGAGAGGGCTTTACCCTGAACCTGGGTTGCg                                                                                          <  1:180278/140‑1 (MQ=255)

                             gCCGATAGCCACGCCGCAAGGGTTGGCGTGCTTCACAATCACACATGCCGGCTCGGCGAACTCTTTCACGCACTCCAGCGCCGCATCGGTATCGGCGATGCTGTTATAAGAGAGGGCTTTACCCTGAACCTGGGTTGCgg                                                                                         >  1:849404/1‑140 (MQ=255)

                             gCCGATAGCCACGCCGCAAGGGTTGGCGTGCTTCACAATCACACATGCCGGCTCGGCGAACTCTTTCACGCACTCCAGCGCCGCATCGGTATCGGCGATGCTGTTATAAGAGAGGGCTTTACCCTGAACCTGGGTTGCgg                                                                                         >  1:1109719/1‑140 (MQ=255)

                              ccGATAGCCACGCCGCAAGGGTTGGCGTGCTTCACAATCACACATGCCGGCTCGGCGAACTCTTTCACGCACTCCAGCGCCGCATCGGTATCGGCGATGCTGTTATAAGAGAGGGCTTTACCCTGAACCTGGGTTGCGGt                                                                                        <  2:1243669/140‑1 (MQ=255)

                                   aGCCACGCCGCAAGGGTTGGCGTGCTTCACAATCACACATGCCGGCTCGGCGAACTCTTTCACGCACTCCAGCGCCGCATCGGTATCGGCGATGCTGTTATAAGAGAGGGCTTTACCCTGAACCTGGGTTGCGGTAGCaa                                                                                   <  2:33346/140‑1 (MQ=255)

                                        cgccgcAAGGGTTGGCGTGCTTCACAATCACACATGCCGGCTCGGCGAACTCTTTCACGCACTCCAGCGCCGCATCGGTATCGGCGATGCTGTTATAAGAGAGGGCTTTACCCTGAACCTGGGTTGCGGTAGCAACgg                                                                                <  1:1207132/138‑1 (MQ=255)

                                        cgccgcAAGGGTTGGCGTGCTTCACAATCACACATGCCGGCTCGGCGAACTCTTTCACGCACTCCAGCGCCGCATCGGTATCGGCGATGCTGTTATAAGAGAGGGCTTTACCCTGAACCTGGGTTGCGGTAGCAACgg                                                                                >  2:1207132/1‑138 (MQ=255)

                                        cgccgcAAGGGTTGGCGTGCTTCACAATCACACATGCCGGCTCGGCGAACTCTTTCACGCACTCCAGCGCCGCATCGGTATCGGCGATGCTGTTATAAGAGAGGGCTTTACCCTGAACCTGGGTTGCGGTAGCAACGGAg                                                                              >  2:848657/1‑140 (MQ=255)

                                        cgccgcAAGGGTTGGCGTGCTTCACAATCACACATGCCGGCTCGGCGAACTCTTTCACGCACTCCAGCGCCGCATCGGTATCGGCGATGCTGTTATAAGAGAGGGCTTTACCCTGAACCTGGGTTGCGGTAGCAACGGAg                                                                              >  1:179194/1‑140 (MQ=255)

                                        cgccgcAAGGGTTGGCGTGCTTCACAATCACACATGCCGGCTCGGCGAACTCTTTCACGCACTCCAGCGCCGCATCGGTATCGGCGATGCTGTTATAAGAGAGGGCTTTACCCTGAACCTGGGTTGCGGTAGCAACGGAg                                                                              >  2:1189915/1‑140 (MQ=255)

                                        cgccgcAAGGGTTGACGTGCTTCACAATCACACATGCCGGCTCGGCGAACTCTTTCACGCACTCCAGCGCCGCATCGGTATCGGCGATGCTGTTATAAGAGAGGGCTTTACCCTGAACCTGGGTTGCGGTAGCAACGGAg                                                                              <  2:465365/140‑1 (MQ=255)

                                            gcAAGGGTTGGCGTGCTTCACAATCACACATGCCGGCTCGGCGAACTCTTTCACGCACTCCAGCGCCGCATCGGTATCGGCGATGCTGTTATAAGAGAGGGCTTTACCCTGAACCTGGGTTGCGGTAGCAACGGAGGctt                                                                          <  2:179194/140‑1 (MQ=255)

                                                 ggTTGGCGTGCTTCACAATCACACATGCCGGCTCGGCGAACTCTTTCACGCACTCCAGCGCCGCATCGGTATCGGCGATGCTGTTATAAGAGAGGGCTTTACCCTGAACCTGGGTTGCGGTAGCAACGGAGGCTTCTTTc                                                                     <  2:284861/140‑1 (MQ=255)

                                                    tGGCGTGCTTCACAATCACACATGCCGGCTCGGCGAACTCTTTCACGCACTCCAGCGCCGCATCGGTATCGGCGATGCTGTTATAAGAGAGGGCTTTACCCTGAACCTGGGTTGCGGTAGCAACGGAGGCTTCTTTcaca                                                                  <  2:363693/140‑1 (MQ=255)

                                                    tGGCGTGCTTCACAATCACACATGCCGGCTCGGCGAACTCTTTCACGCACTCCAGCGCCGCATCGGTATCGGCGATGCTGTTATAAGAGAGGGCTTTACCCTGAACCTGGGTTGCGGTAGCAACGGAGGCTTCTTTcaca                                                                  <  2:1097880/140‑1 (MQ=255)

                                                     ggCGTGCTTCACAATCACACATGCCGGCTCGGCGAACTCTTTCACGCACTCCAGCGCCGCATCGGTATCGGCGATGCTGTTATAAGAGAGGGCTTTACCCTGAACCTGGGTTGCGGTAGCAACGGAGGCTTCTTTCACAt                                                                 >  1:96586/1‑140 (MQ=255)

                                                     ggCGTGCTTCACAATCACACATGCCGGCTCGGCGAACTCTTTCACGCACTCCAGCGCCGCATCGGTATCGGCGATGCTGTTATAAGAGAGGGCTTTACCCTGAACCTGGGTTGCGGTAGCAACGGAGGCTTCTTTCACAt                                                                 >  2:834823/1‑140 (MQ=255)

                                                      gCGTGCTTCGCAATCACACATGCCGGCTCGGCGAACTCTTTCACGCACTCCAGCGCCGCATCGGTATCGGCGATGCTGTTATAAGAGAGGGCTTTACCCTGAACCTGGGTTGCGGTAGCAACGGAGGCTTCTTTCACAtt                                                                <  2:1306023/140‑1 (MQ=255)

                                                      gCGTGCTTCACAATCACACATGCCGGCTCGGCGAACTCTTTCACGCACTCCAGCGCCGCATCGGTATCGGCGATGCTGTTATAAGAGAGGGCTTTACCCTGAACCTGGGTTGCGGTAGCAACGGAGGCTTCTTTCACAtt                                                                <  2:586739/140‑1 (MQ=255)

                                                        gTGCTTCACAATCACACATGCCGGCTCTGCGAACTCTTTCACGCACTCCAGCGCCGCATCGGTATCGGCGATGCTGTTATAAGAGAGGGCTTTACCCTGAACCTGGGTTGCGGTAGCAACGGAGGCTTCTTTCACATtct                                                              <  1:1380510/140‑1 (MQ=255)

                                                        gTGCTTCACAATCACACATGCCGGCTCGGCGAACTCTTTCACGCACTCCAGCGCCGCATCGGTATCGGCGATGCTGTTATAAGAGAGGGCTTTACCCTGAACCTGGGTTGCGGTAGCAGCGGAGGCTTCTTTCACATtct                                                              <  2:1048347/140‑1 (MQ=255)

                                                        gTGCTTCACAATCACACATGCCGGCTCGGCGAACTCTTTCACGCACTCCAGCGCCGCATCGGTATCGGCGATGCTGTTATAAGAGAGGGCTTTACCCTGAACCTGGGTTGCGGTAGCAACGGAGGCTTCTTTCACATtct                                                              <  1:755968/140‑1 (MQ=255)

                                                        gTGCTTCACAATCACACATGCCGGCTCGGCGAACTCTTTCACGCACTCCAGCGCCGCATCGGTATCGGCGATGCTGTTATAAGAGAGGGCTTTACCCTGAACCTGGGTTGCGGTAGCAACGGAGGCTTCTTTCACATtct                                                              <  1:848657/140‑1 (MQ=255)

                                                        gTGCTTCACAATCACACATGCCGGCTCGGCGAACTCTTTCACGCACTCCAGCGCCGCATCGGTATCGGCGATGCTGTTATAAGAGAGGGCTTTACCCTGAACCTGGGTTGCGGTAGCAACGGAGGCTTCTTTCACATtct                                                              <  1:834823/140‑1 (MQ=255)

                                                        gTGCTTCACAATCACACATGCCGGCTCGGCGAACTCTTTCACGCACTCCAGCGCCGCATCGGTATCGGCGATGCTGTTATAAGAGAGGGCTTTACCCTGAACCTGGGTTGCGGTAGCAACGGAGGCTTCTTTCACATtct                                                              <  1:750336/140‑1 (MQ=255)

                                                           cTTCACAATCACACATGCCGGCTCGGCGAACTCTTTCACGCACTCCAGCGCCGCATCGGTATCGGCGATGCTGTTATAAGAGAGGGCTTTACCCTGAACCTGGGTTGCGGTAGCAACGGAGGCTTCTTTCACATTCtctt                                                           >  2:1364163/1‑140 (MQ=255)

                                                           cTTCACAATCACACATGCCGGCTCGGCGAACTCTTTCACGCACTCCAGCGCCGCATCGGTATCGGCGATGCTGTTATAAGAGAGGGCTTTACCCTGAACCTGGGTTGCGGTAGCAACGGAGGCTTCTTTCACATTCtctt                                                           >  2:1011132/1‑140 (MQ=255)

                                                           cTTCACAATCACACATGCCGGCTCGGCGAACTCTTTCACGCACTCCAGCGCCGCATCGGTATCGGCGATGCTGTTATAAGAGAGGGCTTTACCCTGAACCTGGGTTGCGGTAGCAACGGAGGCTTCTTTCACATTCtctt                                                           <  1:1011132/140‑1 (MQ=255)

                                                           cTTCACAATCACACATGCCGGCTCGGCGAACTCTTTCACGCACTCCAGCGCCGCATCGGTATCGGCGATGCTGTTATAAGAGAGGGCTTTACCCTGAACCTGGGTTGCGGTAGCAACGGAGGCTTCTTTCACATTCtctt                                                           <  1:1364163/140‑1 (MQ=255)

                                                            ttCACAATCACACATGCCGGCTCGGCGAACTCTTTCACGCACTCCAGCGCCGCATCGGTATCGGCGATGCTGTTATAAGAGAGGGCTTTACCCTGAACCTGGGTTGCGGTAGCAACGGAGGCTTCTTTCACAtt                                                                >  2:986588/1‑134 (MQ=255)

                                                            ttCACAATCACACATGCCGGCTCGGCGAACTCTTTCACGCACTCCAGCGCCGCATCGGTATCGGCGATGCTGTTATAAGAGAGGGCTTTACCCTGAACCTGGGTTGCGGTAGCAACGGAGGCTTCTTTCACAtt                                                                <  1:986588/134‑1 (MQ=255)

                                                             tCACAATCACACATGCCGGCTCGGCGAACTCTTTCACGCACTCCAGCGCCGCATCGGTATCGGCGATGCTGTTATAAGAGAGGGCTTTACCCTGAACCTGGGTTGCGGTAGCAACGGAGGCTTCTTTCACATTCtcttct                                                         <  2:116192/140‑1 (MQ=255)

                                                                 aaTCACACATGCCGGCTCGGCGAACTCTTTCACGCACTCCAGCGCCGCATCGGTATCGGCGATGCTGTTATAAGAGAGGGCTTTACCCTGAACCTGGGTTGCGGTAGCAACGGAGGCTTCTTTCACATTCTCTTCtatat                                                     <  1:1125155/140‑1 (MQ=255)

                                                                      cacaTGCCGGCTCGGCGAACTCTTTCACGCACTCCAGCGCCGCATCGGTATCGGCGATGCTGTTATAAGAGAGGGCTTTACCCTGAACCTGGGTTGCGGTAGCAACGGAGGCTTCTTTCACATTCTCTTCTATATAGAAg                                                >  1:1162415/1‑140 (MQ=255)

                                                                        caTGCCGGCTCGGCGAACTCTTTCACGCACTCCAGCGCCGCATCGGTATCGGCGATGCTGTTATAAGAGAGGGCTTTACCCTGAACCTGGGTTGCGGTAGCAACGGAGGCTTCTTTCACATTCTCTTCTATATAGAAGGc                                              >  1:520465/1‑140 (MQ=255)

                                                                           gCCGGCTCGGCGAACTCTTTCACGCACTCCAGCGCCGCATCGGTATCGGCGATGCTGTTATAAGAGAGGGCTTTACCCTGAACCTGGGTTGCGGTAGCAACGGAGGCTTCTTTCACATTCTCTTCTATATAGAAGGCAGc                                           <  2:1169134/140‑1 (MQ=255)

                                                                           gCCGGCTCGGCGAACTCTTTCACGCACTCCAGCGCCGCATCGGTATCGGCGATGCTGTTATAAGAGAGGGCTTTACCCTGAACCTGGGTTGCGGTAGCAACGGAGGCTTCTTTCACATTCTCTTCTATATAGAAGGCAGc                                           <  2:736218/140‑1 (MQ=255)

                                                                                 tCGGCGAACTCTTTCACGCACTCCAGCGCCGCATCGGTATCGGCGATGCTGTTATAAGAGAGGGCTTTACCCTGAACCTGGGTTGCGGTAGCAACGGAGGCTTCTTTCACATTCTCTTCTATATAGAAgg                                               >  1:891875/1‑130 (MQ=255)

                                                                                 tCGGCGAACTCTTTCACGCACTCCAGCGCCGCATCGGTATCGGCGATGCTGTTATAAGAGAGGGCTTTACCCTGAACCTGGGTTGCGGTAGCAACGGAGGCTTCTTTCACATTCTCTTCTATATAGAAgg                                               <  2:891875/130‑1 (MQ=255)

                                                                                 tCGGCGAACTCTTTCACGCACTCCAGCGCCGCATCGGTATCGGCGATGCTGTTATAAGAGAGGGCTTTACCCTGAACCTGGGTTGCGGTAGCAACGGAGGCTTCTTTCACATTCTCTTCTATATAGAAGGCAGCctgctg                                     >  2:49504/1‑140 (MQ=255)

                                                                                         ctctTTCACGCACTCCAGCGCCGCATCGGTATCGGCGATGCTGTTATAAGAGAGGGCTTTACCCTGAACCTGGGTTGCGGTAGCAACGGAGGCTTCTTTCACATTCTCTTCTATATAGAAGGCAGCCTGCTGGTGGCTGt                             >  1:248372/1‑140 (MQ=255)

                                                                                            tttCACGCACTCCAGCGCCGCATCGGTATCGGCGATGCTGTTATAAGAGAGGGCTTTACCCTGAACCTGGGTTGCGGTAGCAACGGAGGCTTCTTTCACATTCTCTTCTATATAGAAGGCAGCCTGCTGGTGGCTGTtct                          <  2:1109719/140‑1 (MQ=255)

                                                                                             ttCACGCACTCCAGCGCCGCATCGGTATCGGCGATGCTGTTATAAGAGAGGGCTTTACCCTGAACCTGGGTTGCGGTAGCAACGGAGGCTTCTTTCACATTCTCTTCTATATAGAAGGCAGCCTGCTGGTGGCTGTtctc                         >  1:520188/1‑140 (MQ=255)

                                                                                                        cAGCGCCGCATCGGTATCGGCGATGCTGTTATAAGAGAGGGCTTTACCCTGAACCTGGGTTGCGGTAGCAACGGAGGCTTCTTTCACATTCTCTTCTATATAGAAGGCAGCCTGCTGGTGGCTGTTCTCGCCGTAACGCa              <  2:520188/140‑1 (MQ=255)

                                                                                                        cAGCGCCGCATCGGTATCGGCGATGCTGTTATAAGAGAGGGCTTTACCCTGAACCTGGGTTGCGGTAGCAACGGAGGCTTCTTTCACATTCTCTTCTATATAGAAGGCAGCCTGCTGGTGGCTGTTCTCGCCGTAACGCa              >  1:639760/1‑140 (MQ=255)

                                                                                                              cgcATCGGTATCGGCGATGCTGTTATAAGAGAGGGCTTTACCCTGAACCTGGGTTGCGGTAGCAACGGAGGCTTCTTTCACATTCTCTTCTATATAGAAGGCAGCCTGCTGGTGGCTGTTCTCGCCGTAACGCATATCCa        <  1:49504/140‑1 (MQ=255)

                                                                                                              cgcATCGGTATCGGCGATGCTGTTATAAGAGAGGGCTTTACCCTGAACCTGGGTTGCGGTAGCAACGGAGGCTTCTTTCACATTCTCTTCTATATAGAAGGCAGCCTGCTGGTGGCTGTTCTCGCCGTAACGCATATCCa        <  2:283100/140‑1 (MQ=255)

                                                                                                                cATCGGTATCGGCGATGCTGTTATAAGAGAGGGTTTTACCCTGAACCTGGGTTGCGGTAGCAACGGAGGCTTCTTTCACATTCTCTTCTATATAGAAGGCAGCCTGCTGGTGGCTGTTCTCGCCGTAACGCATATCCAGc      >  1:1202613/1‑140 (MQ=255)

                                                                                                                cATCGGTATCGGCGATGCTGTTATAAGAGAGGGCTTTACCCTGAACCTGGGTTGCGGTAGCAACGGAGGCTTCTTTCACATTCTCTTCTATATAGAAGGCAGCCTGCTGGTGGCTGTTCTCGCCGTAACGCATATCCAGc      >  1:324867/1‑140 (MQ=255)

                                                                                                                cATCGGTATCGGCGATGCTGTTATAAGAGAGGGCTTTACCCTGAACCTGGGTTGCGGTAGCAACGGAGGCTTCTTTCACATTCTCTTCTATATAGAAGGCAGCCTGCTGGTGGCTGTTCTCGCCGTAACGCATATCCAGc      >  2:889082/1‑140 (MQ=255)

                                                                                                                    ggTATCGGCGATGCTGTTATAAGAGAGGGTTTTACCCTGAACCTGGGTTGCGGTAGCAACGGAGGCTTCTTTCACATTCTCTTCTATATAGAAGGCAGCCTGCTGGTGGCTGTTCTCGCCGTAACGCATATCCAGcttct  <  2:1202613/140‑1 (MQ=255)

                                                                                                                    ggTATCGGCGATGCTGTTATAAGAGAGGGCTTTACCCTGAACCTGGGTTGCGGTAGCAACGGAGGCTTCTTTCACATTCTCTTCTATATAGAAGGCAGCCTGCTGGTGGCTGTTCTCGCCGTAACGCATATCCAGcttct  <  2:639760/140‑1 (MQ=255)

GCGCGATCGTAAGCATCAAGAATGGAATTGCCGATAGCCACGCCGCAAGGGTTGGCGTGCTTCACAATCACACATGCCGGCTCGGCGAACTCTTTCACGCACTCCAGCGCCGCATCGGTATCGGCGATGTTGTTATAAGAGAGGGCTTTACCCTGAACCTGGGTTGCGGTAGCAACGGAGGCTTCTTTCACATTCTCTTCTATATAGAAGGCAGCCTGCTGGTGGCTGTTCTCGCCGTAACGCATATCCAGCTTCT  >  NC_000913/4206613‑4206868

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

N/A