Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A9 F28 I1 R1
|
138 |
91.1 |
3071990 |
99.2% |
3047414 |
138.5 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,142,585 |
T→C |
V19A (GTT→GCT) |
frwC → |
putative PTS enzyme IIC component FrwC |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,142,585 | 0 | T | C | 100.0%
| 262.7
/ NA
| 75 | V19A (GTT→GCT) | frwC | putative PTS enzyme IIC component FrwC |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (42/33); total (42/33) |
TGTTTGCTCCGCCTGCGATTGCCTATTGTTTCCTCCATCAAAAATATGGACATGGGCTTTCGCAAGCCCGGGAGCAGCTTATGAATGAGTTGGTGCAGATCCTGAAAAATACCCGTCAGCATTTAATGACGGGCGTTTCACACATGATTCCCTTCGTGGTATCGGGCGGTATTTTGCTGGCGGTTTCCGTCATGTTGTATGGCAAAGGCGCAGTGCCGGATGCCGTAGCCGATCCAAATCTGAAAAAACTGTTTGATATCGGCGTTGCGGGC > NC_000913/4142450‑4142721
|
tGTTTGCTCCGCCTGCGATTGCCTATTGTTTCCTCCATCAAAAATATGGACATGGGCTTTCGCAAGCCCGGGAGCAGCTTATGAATGAGTTGGTGCAGATCCTGAAAAATACCCGTCAGCATTTAATGACGGGCGCTTca > 2:900389/1‑140 (MQ=255)
tttGCTCCGCCTGCGATTGCCTATTGTTTCCTCCATCAAAAATATGGACATGGGCTTTCGCAAGCCCGGGAGCAGCTTATGAATGAGTTGGTGCAGATCCTGAAAAATACCCGTCAGCATTTAATGACGGGCGCTTcaca > 1:402350/1‑140 (MQ=255)
tttGCTCCGCCTGCGATTGCCTATTGTTTCCTCCATCAAAAATATGGACATGGGCTTTCGCAAGCCCGGGAGCAGCTTATGAATGAGTTGGTGCAGATCCTGAAAAATACCCGTCAGCATTTAATGACGGGCGCTTcaca > 2:1010967/1‑140 (MQ=255)
tttGCTCCGCCTGCGATTGCCTATTGTTTCCTCCATCAAAAATATGGACATGGGCTTTCGCAAGCCCGGGAGCAGCTTATGAATGAGTTGGTGCAGATCCTGAAAAATACCCGTCAGCATTTAATGACGGGCGCTTcaca < 2:872551/140‑1 (MQ=255)
tttGCTCCGCCTGCGATTGCCTATTGTTTCCTCCATCAAAAATATGGACATGGGCTTTCGCAAGCCCGGGAGCAGCTTATGAATGAGTTGGTGCAGATCCTGAAAAATACCCGTCAGCATTTAATGACGGGCGCTTcaca > 2:410629/1‑140 (MQ=255)
tttGCTCCGCCTGCGATTGCCTATTGTTTCCTCCATCAAAAATATGGACATGGGCTTTCGCAAGCCCGGGAGCAGCTTATGAATGAGTTGGTGCAGATCCTGAAAAATACCCGTCAGCATTTAATGACGGGCGCTTcaca > 1:610671/1‑140 (MQ=255)
tGCTCCGCCTGCGATTGCCTATTGTTTCCTCCATCAAAAATATGGACATGGGCTTTCGCAAGCCCGGGAGCAGCTTATGAATGAGTTGGTGCAGATCCTGAAAAATACCCGTCAGCATTTAATGACGGGCGCTTcacaca > 1:321868/1‑140 (MQ=255)
tGCTCCGCCTGCGATTGCCTATTGTTTCCTCCATCAAAAATATGGACATGGGCTTTCGCAAGCCCGGGAGCAGCTTATGAATGAGTTGGTGCAGATCCTGAAAAATACCCGTCAGCATTTAATGACGGGCGCTTcac > 1:878496/1‑137 (MQ=255)
tGCTCCGCCTGCGATTGCCTATTGTTTCCTCCATCAAAAATATGGACATGGGCTTTCGCAAGCCCGGGAGCAGCTTATGAATGAGTTGGTGCAGATCCTGAAAAATACCCGTCAGCATTTAATGACGGGCGCTTcac < 2:878496/137‑1 (MQ=255)
tCCGCCTGCGATTGCCTATTGTTTCCTCCATCAAAAATATGGACATGGGCTTTCGCAAGCCCGGGAGCAGCTTATGAATGAGTTGGTGCAGATCCTGAAAAATACCCGTCAGCATTTAATGACGGGCGCTTCACACATGa > 1:725154/1‑140 (MQ=255)
ccGCCTGCGATTGCCTATTGTTTCCTCCATCAAAAATATGGACATGGGCTTTCGCAAGCCCGGGAGCAGCTTATGAATGAGTTGGTGCAGATCCTGAAAAATACCCGTCAGCATTTAATGACGGGCGCTTCACACATGAt < 2:1516214/140‑1 (MQ=255)
ccTGCGATTGCCTATTGTTTCCTCCATCAAAAATATGGACATGGGCTTTCGCAAGCCCGGGAGCAGCTTATGAATGAGTTGGTGCAGATCCTGAAAAATACCCGTCAGCATTTAATGACGGGCGCTTCACACATGATTcc < 1:1028619/140‑1 (MQ=255)
tGCGATTGCCTATTGTTTCCTCCATCAAAAATATGGACATGGGCTTTCGCAAGCCCGGGAGCAGCTTATGAATGAGTTGGTGCAGATCCTGAAAAATACCCGTCAGCATTTAATGACGGGCGCTTCACACATGATTCCCt < 1:410629/140‑1 (MQ=255)
cGATTGCCTATTGTTTCCTCCATCAAAAATATGGACATGGGCTTTCGCAAGCCCGGGAGCAGCTTATGAATGAGTTGGTGCAGATCCTGAAAAATACCCGTCAGCATTTAATGACGGGCGCTTCACACATGATTCCCTTc < 2:284737/140‑1 (MQ=255)
gATTGCCTATTGTTTCCTCCATCAAAAATATGGACATGGGCTTTCGCAAGCCCGGGAGCAGTTTATGAATGAGTTGGTGCAGATCCTGAAAAATACCCGTCAGCATTTAATTACGGGCGCTTCACACATGATTCCCTTCg < 2:1334058/140‑1 (MQ=255)
ccTATTGTTTCCTCCATCAAAAATATGGACATGGGCTTTCGCAAGCCCGGGAGCAGCTTATGAATGAGTTGGTGCAGATCCTGAAAAATACCCGTCAGCATTTAATGACGGGCGCTTCACACATGATTCCCTTCGTGGTa > 2:529431/1‑140 (MQ=255)
tcctccATCAAAAATATGGACATGGGCTTTCGCAAGCCCGGGAGCAGCTTATGAATGAGTTGGTGCAGATCCTGAAAAATACCCGTCAGCATTTAATGACGGGCGCTTCACACATGATTCCCTTCGTGGTATCGGGCGGt > 2:789006/1‑140 (MQ=255)
aaaaTATGGACATGGGCTTTCGCAAGCCCGGGAGCAGCTTATGAATGAGTTGGTGCAGATCCTGAAAAATACCCGTCAGCATTTAATGACGGGCGCTTCACACATGATTCCCTTCGTGGTATCGGGCGGTATTTTGCTgg < 2:610671/140‑1 (MQ=255)
tatGGACATGGGCTTTCGCAAGCCCGGGAGCAGCTTATGAATGAGTTGGTGCAGATCCTGAAAAATACCCGTCAGCATTTAATGACGGGCGCTTCACACATGATTCCCTTCGTGGTATCGGGCGGTATTTTGCTGGCGGt < 2:1438845/140‑1 (MQ=255)
aCATGGGCTTTCGCAAGCCCGGGAGCAGCTTATGAATGAGTTGGTGCAGATCCTGAAAAATACCCGTCAGCATTTAATGACGGGCGCTTCACACATGATTCCCTTCGTGGTATCGGGCGGTATTTTGCTGGCGGTTTCCg < 1:85375/140‑1 (MQ=255)
aTGGGCTTTCGCAAGCCCGGGAGCAGCTTATGAATGAGTTGGTGCAGATCCTGAAAAATACCCGTCAGCATTTAATGACGGGCGCTTCACACATGATTCCCTTCGTGGTATCGGGCGGTATTTTGCTGGCGGTTTCCg < 1:1023288/138‑1 (MQ=255)
aTGGGCTTTCGCAAGCCCGGGAGCAGCTTATGAATGAGTTGGTGCAGATCCTGAAAAATACCCGTCAGCATTTAATGACGGGCGCTTCACACATGATTCCCTTCGTGGTATCGGGCGGTATTTTGCTGGCGGTTTCCg > 2:1023288/1‑138 (MQ=255)
aTGGGCTTTCGCAAGCCCGGGAGCAGCTTATGAATGAGTTGGTGCAGATCCTGAAAAATACCCGTCAGCATTTAATGACGGGCGCTTCACACATGATTCCCTTCGTGGTATCGGGCGGTATTTTGCTGGCGGTTTCCGTc > 1:1432484/1‑140 (MQ=255)
tGGGCTTTCGCAAGCCCGGGAGCAGCTTATGAATGAGTTGGTGCAGATCCTGAAAAATACCCGTCAGCATTTAATGACGGGCGCTTCACACATGATTCCCTTCGTGGTATCGGGCGGTATTTTGCTGGCGGTTTCCGTCa > 2:857837/1‑140 (MQ=255)
gggCTTTCGCAAGCCCGGGAGCAGCTTATGAATGAGTTGGTGCAGATCCTGAAAAATACCCGTCAGCATTTAATGACGGGCGCTTCACACATGATTCCCTTCGTGGTATCGGGCGGTATTTTGCTGGCGGTTTCCGTCAt > 2:878172/1‑140 (MQ=255)
ggCTTTCGCAAGCCCGGGAGCAGCTTATGAATGAGTTGGTGCAGATCCTGAAAAATACCCGTCAGCATTTAATGACGGGCGCTTCACACATGATTCCCTTCGTGGTATCGGGCGGTATTTTGCTGGCGGTTTCCGTCAtg > 2:27749/1‑140 (MQ=255)
ttCGCAAGCCCGGGAGCAGCTTATGAATGAGTTGGTGCAGATCCTGAAAAATACCCGTCAGCATTTAATGACGGGCGCTTCACACATGATTCCCTTCGTGGTATCGGGCGGTATTTTGCTGGCGGTTTCCGTCAtgttgt < 2:1239687/140‑1 (MQ=255)
tCGCAAGCCCGGGAGCAGCTTATGAATGAGTTGGTGCAGATCCTGAAAAATACCCGTCAGCATTTAATGACGGGCGCTTCACACATGATTCCCTTCGTGGTATCGGGCGGTATTTTGCTGGCGGttt < 1:839797/127‑1 (MQ=255)
tCGCAAGCCCGGGAGCAGCTTATGAATGAGTTGGTGCAGATCCTGAAAAATACCCGTCAGCATTTAATGACGGGCGCTTCACACATGATTCCCTTCGTGGTATCGGGCGGTATTTTGCTGGCGGttt > 2:839797/1‑127 (MQ=255)
tCGCAAGCCCGGGAGCAGCTTATGAATGAGTTGGTGCAGATCCTGAAAAATACCCGTCAGCATTTAATGACGGGCGCTTAACACATGATTCCCTTCGTGGTATCGGGCGGTATTTTGCTGGCGGTTTCCGTCAtgttg > 2:915430/1‑138 (MQ=255)
tCGCAAGCCCGGGAGCAGCTTATGAATGAGTTGGTGCAGATCCTGAAAAATACCCGTCAGCATTTAATGACGGGCGCTTAACACATGATTCCCTTCGTGGTATCGGGCGGTATTTTGCTGGCGGTTTCCGTCAtgttg < 1:915430/138‑1 (MQ=255)
gCCCGGGAGCAGCTTATGAATGAGTTGGTGCAGATCCTGAAAAATACCCGTCAGCATTTAATGACGGGCGCTTCACACATGATTCCCTTCGTGGTATCGGGCGGTATTTTGCTGGCGGTTTCCGTCATGTTGTATGGCaa < 2:725154/140‑1 (MQ=255)
ggAGCAGCTTATGAATGAGTTGGTGCAGATCCTGAAAAATACCCGTCAGCATTTAATGACGGGCGCTTCACACATGATTCCCTTCGTGGTATCGGGCGGTATTTTGCTGGCGGTTTCCGTCAtg > 2:1197270/1‑124 (MQ=255)
ggAGCAGCTTATGAATGAGTTGGTGCAGATCCTGAAAAATACCCGTCAGCATTTAATGACGGGCGCTTCACACATGATTCCCTTCGTGGTATCGGGCGGTATTTTGCTGGCGGTTTCCGTCAtg < 1:1197270/124‑1 (MQ=255)
ggAGCAGCTTATGAATGAGTTGGTGCAGATCCTGAAAAATACCCGTCAGCATTTAATGACGGGCGCTTCACACATGATTCCCTTCGTGGTATCGGGCGGTATTTTGCTGGCGGTTTCCGTCATGTTGTATGGCAAAGgcg < 1:789006/140‑1 (MQ=255)
ggAGCAGCTTATGAATGAGTTGGTGCAGATCCTGAAAAATACCCGTCAGCATTTAATGACGGGCGCTTCACACATGATTCCCTTCGTGGTATCGGGCGGTATTTTGCTGGCGGTTTCCGTCATGTTGTATGGCAAAGgcg < 1:900389/140‑1 (MQ=255)
ggAGCAGCTTATGAATGAGTTGGTGCAGATCCTGAAAAATACCCGTCAGCATTTAATGACGGGCGCTTCACACATGATTCCCTTCGTGGTATCGGGCGGTATTTTGCTGGCGGTTTCCGTCATGTTGTATGGCAAAGgcg < 1:529431/140‑1 (MQ=255)
gcTTATGAATGAGTTGGTGCAGATCCTGAAAAATACCCGTCAGCATTTAATGACGGGCGCTTCACACATGATTCCCTTCGTGGTATCGGGCGGTATTTTGCTGGCGGTTTTCGTCCTGTTGTTTGGGAAAAGCGCAGGGc > 2:388134/1‑140 (MQ=255)
cTTATGAATGAGTTGGTGCAGATCCTGAAAAATACCCGTCAGCATTTAATGACGGGCGCTTCACACATGATTCCCTTCGTGGTATCGGGCGGTATTTTGCTGGCGGTTTCCGTCATGTTGTATGGCAAAGGCGCa < 1:1463298/135‑1 (MQ=255)
cTTATGAATGAGTTGGTGCAGATCCTGAAAAATACCCGTCAGCATTTAATGACGGGCGCTTCACACATGATTCCCTTCGTGGTATCGGGCGGTATTTTGCTGGCGGTTTCCGTCATGTTGTATGGCAAAGGCGCa > 2:1463298/1‑135 (MQ=255)
cTTATGAATGAGTTGGTGCAGATCCTGAAAAATACCCGTCAGCATTTAATGACGGGCGCTTCACACATGATTCCCTTCGTGGTATCGGGCGGTATTTTGCTGGCGGTTTCCGTCATGTTGTATGGCAAAGGCGCAGTGcc > 1:568947/1‑140 (MQ=255)
cagaatgaGTTGGTGCAGATCCTGAAAAATACCCGTCAGCATTTAATGACGGGCGCTTCACACATGATTCCCTTCGTGGTATCGGGCGGTATTTTGCTGGCGGTTTCCGTCATGTTGTATGGCAAAGGCGCAGTGCCGGa < 1:1421728/138‑1 (MQ=255)
atgaatgaGTTGGTGCAGATCCTGAAAAATACCCGTCAGCATTTAATGACGGGCGCTTCACACATGATTCCCTTCGTGGTATCGGGCGGTATTTTGCTGGCGGTTTCCGTCATGTTGTATGGCAAAGGCGCAGTGCCGGa < 1:1010967/140‑1 (MQ=255)
tgaatgaGTTGGTGCAGATCCTGAAAAATACCCGTCAGCATTTAATGACGGGCGCTTCACACATGATTCCCTTCGTGGTATCGGGCGGTATTTTGCTGGCGGTTTCCGTCATGTTGTATGGCAAAGGCGCAGTGCCGGAt > 2:931366/1‑140 (MQ=255)
atgaGTTGGCGCAGATCCTGAAAAATACCCGTCAGCATTTAATGACGGGCGCTTCACACATGATTCCCTTCGTGGTATCGGGCGGTATTTTGCTGGCGGTTTCCGTCATGTTGTATGGCAAAGGCGCAGTGCCGGATGcc < 2:594610/140‑1 (MQ=255)
tgaGTTGGTGCAGATCCTGAAAAATACCCGTCAGCATTTAATGACGGGCGCTTCACACATGATTCCCTTCGTGGTATCGGGCGGTATTTTGCTGGCGGTTTCCGTCATGTTGTATGGCAAAGGCGCAGTGCCgg > 1:343139/1‑134 (MQ=255)
tgaGTTGGTGCAGATCCTGAAAAATACCCGTCAGCATTTAATGACGGGCGCTTCACACATGATTCCCTTCGTGGTATCGGGCGGTATTTTGCTGGCGGTTTCCGTCATGTTGTATGGCAAAGGCGCAGTGCCgg < 2:343139/134‑1 (MQ=255)
aGTTGGTGCAGATCCTGAAAAATACCCGTCAGCATTTAATGACGGGCGCTTCACACATGATTCCCTTCGTGGTATCGGGCGGTATTTTGCTGGCGGTTTCCGTCATGTTGTATGGCAAAGGCGCAGTGCCGGATGCCGTa > 1:687678/1‑140 (MQ=255)
aGTTGGTGCAGATCCTGAAAAATACCCGTCAGCATTTAATGACGGGCGCTTCACACATGATTCCCTTCGTGGTATCGGGCGGTATTTTGCTGGCGGTTTCCGTCATGTTGTATGGCAAAGGCGCAGTGCCGGATGCCGTa > 1:72376/1‑140 (MQ=255)
ttGGTGCAGATCCTGAAAAATACCCGTCAGCATTTAATGACGGGCGCTTCACACATGATTCCCTTCGTGGTATCGGGCGGTATTTTGCTGGCGGTTTCCGTCATGTTGTATGGCAAAGGCGCAGTGCCGGATGCCGTAGc < 1:27749/140‑1 (MQ=255)
ttGGTGCAGATCCTGAAAAATACCCGTCAGCATTTAATGACGCGCGCTTCACACATGATTCCCTTCGTGGTATCGGGCGGTATTTTGCTGGCGGTTTCCGTCATGTTGTATGGCAAAGGCGCAGTGCCGGATGCCGTAGc < 2:1432484/140‑1 (MQ=255)
ggTGCAGATCCTGAAAAATACCCGTCAGCATTTAATGACGGGCGCTTCACACATGATTCCCTTCGTGGTATCGGGCGGTATTTTGCTGGCGGTTTCCGTCATGTTGTATGGCAAAGGCGCAGTGCCgg < 1:1440728/128‑1 (MQ=255)
ggTGCAGATCCTGAAAAATACCCGTCAGCATTTAATGACGGGCGCTTCACACATGATTCCCTTCGTGGTATCGGGCGGTATTTTGCTGGCGGTTTCCGTCATGTTGTATGGCAAAGGCGCAGTGCCgg > 2:1440728/1‑128 (MQ=255)
gCAGATCCTGAAAAATACCCGTCAGCATTTAATGACGGGCGCTTCACACATGATTCCCTTCGTGGTATCGGGCGGTATTTTGCTGGCGGTTTCCGTAGTGTTTTATGGCAAAGGCGCCGGGCCGGATGCCGTAGccccgg > 2:1421728/1‑136 (MQ=255)
tCCTGAAAAATACCCGTCAGCATTTAATGACGGGCGCTTCACACATGATTCCCTTCGTGGTATCGGGCGGTATTTTGCTGGCGGTTTCCGTCATGTTGTATGGCAAAGGCGCAGTGCCGGATGCCGTAGCCGATCCAAAt > 1:309674/1‑140 (MQ=255)
gAAAAATACCCGTCAGCATTTAATGACGGGCGCTTCACACATGATTCCCTTCGTGGTATCGGGCGGTATTTTGCTGGCGGTTTCCGTCATGTTGTATGGCAAAGGCGCAGTGCCGGATGCCGTAGCCGATCCAAATCTGa > 2:1062010/1‑140 (MQ=255)
gAAAAATACCCGTCAGCATTTAATGACGGGCGCTTCACACATGATTCCCTTCGTGGTATCGGGCGGTATTTTGCTGGCGGTTTCCGTCATGTTGTATGGCAAAGGCGCAGTGCCGGATGCCGTAGCCGATCCAAATCTGa > 2:284797/1‑140 (MQ=255)
gAAAAATACCCGTCAGCATTTAATGACGGGCGCTTCACACATGATTCCCTTCGTGGTATCGGGCGGTATTTTGCTGGCGGTTTCCGTCATGTTGTATGGCAAAGGCGCAGTGCCGGATGCCGTAGCCGATCCAAATCTGa > 1:855950/1‑140 (MQ=255)
gAAAAATACCCGTCAGCATTTAATGACGGGCGCTTCACACATGATTCCCTTCGTGGTATCGGGCGGTATTTTGCTGGCGGTTTCCGTCATGTTGTATGGCAAAGGCGCAGTGCCGGATGCCGTAGCCGATCCAAATCTGa > 1:1200055/1‑140 (MQ=255)
gAAAAATACCCGTCAGCATTTAATGACGGGCGCTTCACACATGATTCCCTTCGTGGTATCGGGCGGTATTTTGCTGGCGGTTTCCGTCATGTTGTATGGCAAAGGCGCAGTGCCGGATGCCGTAGCCGATCCAAATCTGa > 2:1320307/1‑140 (MQ=255)
aaaaTACCCGTCAGCATTTAATGACGGGCGCTTCACACATGATTCCCTTCGTGGTATCGGGCGGTATTTTGCTGGCGGTTTTCGTCATGTTGTATGGCAAAAGCGCAGTGCCGGATGCCGTAGCCGATCCAAATCTGaaa > 2:1075785/1‑140 (MQ=255)
aaaTACCCGTCAGCATTTAATGACGGGCGCTTCACACATGATTCCCTTCGTGGTATCGGGCGGTATTTTGCTGGCGGTTTCCGTCATGTTGTATGGCAAAGGCGCAGTGCCGGATGCCGTAGCCGATCCAAATCTGaaaa < 2:309674/140‑1 (MQ=255)
aTACCCGTCAGCATTTAATGACGGGCGCTTCACACATGATTCCCTTCGTGGTATCGGGCGGTATTTTGCTGGCGGTTTCCGTCATGTTGTATGGCAAAGGCGCAGTGCCGGATGCCGTAGCCGATCCAAATCTGaaaaaa < 1:1062010/140‑1 (MQ=255)
aTACCCGTCAGCATTTAATGACGGGCGCTTCACACATGATTCCCTTCGTGGTATCGGGCGGTATTTTGCTGGCGGTTTCCGTCATGTTGTATGGCAAAGGCGCAGTGCCGGATGCCGTAGCCGATCCAAATCTGaaaaaa < 2:855950/140‑1 (MQ=255)
aTACCCGTCAGCATTTAATGACGGGCGCTTCACACATGATTCCCTTCGTGGTATCGGGCGGTATTTTGCTGGCGGTTTCCGTCATGTTGTATGGCAAAGGCGCAGTGCCGGATGCCGTAGCCGATCCAAATCTGaaaaaa < 1:388134/140‑1 (MQ=255)
tACCCGTCAGCATTTAATGACGGGCGCTTCACACATGATTCCCTTCGTGGTATCGGGCGGTATTTTGCTGGCGGTTTCCGTCATGTTGTATGGCAAAGGCGCAGTGCCGGATGCCGTAGCCGATCCAAATCTGAAAAAAc > 1:177030/1‑140 (MQ=255)
ccGTCAGCATTTAATGACGGGCGCTTCACACATGATTCCCTTCGTGGTATCGGGCGGTATTTTGCTGGCGGTTTTCGTCCTGTTTTATGGCAAAGGCGCAGTGCCGGATGCCGTAGCCGATCCAAATCTGAAAAAACTGt > 2:891254/1‑140 (MQ=255)
gTCAGCATTTAATGACGGGCGCTTCACACATGATTCCCTTCGTGGTATCGGGCGGTATTTTGCTGGCGGTTTCCGTCATGTTGTATGGCAAAGGCGCAGTGCCGGATGCCGTAGCCGATCCAAATCTGAAAAAACTGttt > 1:2528/1‑140 (MQ=255)
gTCAGCATTTAATGACGGGCGCTTCACACATGATTCCCTTCGTGGTATCGGGCGGTATTTTGCTGGCGGTTTCCGTCATGTTGTATGGCAAAGGCGCAGTGCCGGATGCCGTAGCCGATCCAAATCTGAAAAAACTGttt > 1:1250129/1‑140 (MQ=255)
cATTTAATGACGGGCGCTTCACACATGATTCCCTTCGTGGTATCGGGCGGTATTTTGCTGGCGGTTTCCGTCATGTTGTATGGCAAAGGCGCAGTGCCGGATGCCGTAGCCGATCCAAATCTGAAAAAACTGTTTGatat < 1:284797/140‑1 (MQ=255)
aaTGACGGGCGCTTCACACATGATTCCCTTCGTGGTATCGGGCGGTATTTTGCTGGCGGTTTCCGTCATGTTGTATGGCAAAGGCGCAGTGCCGGATGCCGTAGCCGATCCAAATCTGAAAAAACTGTTTGATATCGGCg > 2:1362603/1‑140 (MQ=255)
tGACGGGCGCTTCACACATGATTCCCTTCGTGGTATCGGGCGGTATTTTGCTGGCGGTTTCCGTCATGTTGTATGGCAAAGGCGCAGTGCCGGATGCCGTAGCCGATCCAAATCTGaaaaaa < 2:61166/122‑1 (MQ=255)
tGACGGGCGCTTCACACATGATTCCCTTCGTGGTATCGGGCGGTATTTTGCTGGCGGTTTCCGTCATGTTGTATGGCAAAGGCGCAGTGCCGGATGCCGTAGCCGATCCAAATCTGaaaaaa > 1:61166/1‑122 (MQ=255)
gACGGGCGCTTCACACATGATTCCCTTCGTGGTATCGGGCGGTATTTTGCTGGCGGTTTTCGTCATGTTGTATGGCAAAGGGGCAGTGCCGGATGCCGTAGCCGATCCAAATCTGAAAAAACTGTTTGATATCGGCGTTg > 2:467202/1‑140 (MQ=255)
aCGGGCGCTTCACACATGATTCCCTTCGTGGTATCGGGCGGTATTTTGCTGGCGGTTTCCGTCATGTTGTATGGCAAAGGCGCAGTGCCGGATGCCGTAGCCGATCCAAATCTGAAAAAACTGTTTGATATCGGCGTTGc < 2:1200055/140‑1 (MQ=255)
cGGGCGCTTCACACATGATTCCCTTCGTGGTATCGGGCGGTATTTTGCTGGCGGTTTCCGGCATGTTGTATTGCAAAGGGGCAGTGCCGGATGACGGAGCCGATTCAAATATGAAAAAACTGTTTGATATCCGCGGTGCg > 2:1133561/1‑140 (MQ=255)
gcgcTTCACACATGATTCCCTTCGTGGTATCGGGCGGTATTTTGCTGGCGGTTTCCGTCATGTTGTATGGCAAAGGCGCAGTGCCGGATGCCGTAGCCGATCCAAATCTGAAAAAACTGTTTGATATCGGCGtt < 2:1103763/134‑1 (MQ=255)
gcgcTTCACACATGATTCCCTTCGTGGTATCGGGCGGTATTTTGCTGGCGGTTTCCGTCATGTTGTATGGCAAAGGCGCAGTGCCGGATGCCGTAGCCGATCCAAATCTGAAAAAACTGTTTGATATCGGCGTTGCGGGc < 2:1250129/140‑1 (MQ=255)
|
TGTTTGCTCCGCCTGCGATTGCCTATTGTTTCCTCCATCAAAAATATGGACATGGGCTTTCGCAAGCCCGGGAGCAGCTTATGAATGAGTTGGTGCAGATCCTGAAAAATACCCGTCAGCATTTAATGACGGGCGTTTCACACATGATTCCCTTCGTGGTATCGGGCGGTATTTTGCTGGCGGTTTCCGTCATGTTGTATGGCAAAGGCGCAGTGCCGGATGCCGTAGCCGATCCAAATCTGAAAAAACTGTTTGATATCGGCGTTGCGGGC > NC_000913/4142450‑4142721
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
