Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A7 F28 I1 R1 172 67.8 2301510 98.9% 2276193 138.4

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,352,439 A→G V196A (GTT→GCT)  arcB ← sensory histidine kinase ArcB

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,352,4390AG100.0% 204.8 / NA 61V196A (GTT→GCT) arcBsensory histidine kinase ArcB
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base G (30/31);  total (30/31)

TGCGCCCGTCCGGGTAATCCAGCCACTGTTCATAGGTCAGTGACACATTATGACGGAACACTTTTTCATCGGTTTCAATGACTTTTGCGGCGGCTTCCGGTGAGTAAACATCAGCAGGTTTCAGGTGAACCAGTTGTTTTTCGCTTTTTCCGGTCAGCAGCTCCATCGCGCGGTTACAGCCGGAAAACTCTTTATCTTCGTTACGATAAAAAACCAGGTCGGGTGAAGCATCAAGGAAGGAACGTAAGAATGAGGATTGCTGCT  >  NC_000913/3352311‑3352574
                                                                                                                                |                                                                                                                                       
tGCGCCCGTCCGGGTAATCCAGCCACTGTTCATAGGTCAGTGACACATTATGACGGAACACTTTTTCATCGGTTTCAATGACTTTTGCGGCGGCTTCCGGTGAGTAAACATCAGCAGGTTTCAGGTGAGCCAGTTGtttt                                                                                                                              <  1:1106530/140‑1 (MQ=255)
   gcCCGTCCGGGTAATCCAGCCACTGTTCATAGGTCAGTGACACATTATGACGGAACACTTTTTCATCGGTTTCAATGACTTTTGCGGCGGCTTCCGGTGAGTAAACATCAGCAGGTTTCAGGTGAGCCAGTTGTTTTTCg                                                                                                                           <  2:400174/140‑1 (MQ=255)
    cccGTCCGGGTAATCCAGCCACTGTTCATAGGTCAGTGACACATTATGACGGAACACTTTTTCATCGGTTTCAATGACTTTTGCGGCGGCTTCCGGTGAGTAAACATCAGCAGGTTTCAGGTGAGCCAGTTGTTTTTCGc                                                                                                                          >  1:682357/1‑140 (MQ=255)
        tCCGGGTAATCCAGCCACTGTTCATAGGTCAGTGACACATTATGACGGAACACTTTTTCATCGGTTTCAATGACTTTTGCGGCGGCTTCCGGTGAGTAAACATCAGCAGGTTTCAGGTGAGCCAGTTGTTTTTCGCtttt                                                                                                                      >  2:657211/1‑140 (MQ=255)
            ggTAATCCAGCCACTGTTCATAGGTCAGTGACACATTATGACGGAACACTTTTTCATCGGTTTCAATGACTTTTGCGGCGGCTTCCGGTGAGTAAACATCAGCAGGTTTCAGGTGAGCCAGTTGTTTTTCGCTTTTTCCg                                                                                                                  >  2:102604/1‑140 (MQ=255)
               aaTCCAGCCACTGTTCATAGGTCAGTGACACATTATGACGGAACACTTTTTCATCGGTTTCAATGACTTTTGCGGCGGCTTCCGGTGAGTAAACATCAGCAGGTTTCAGGTGAGCCAGTTGTTTTTCGCTTTTTCCGGTc                                                                                                               <  2:25532/140‑1 (MQ=255)
                   cAGCCACTGTTCATAGGTCAGTGACACATTATGACGGAACACTTTTTCATCGGTTTCAATGACTTTTGCGGCGGCTTCCGGTGAGTAAACATCAGCAGGTTTCAGGTGAGCCAGTTGTTTTTCGCTTTTTCCGGTcagca                                                                                                           >  2:1082046/1‑140 (MQ=255)
                    aGCCACTGTTCATAGGTCAGTGACACATTATGACGGAACACTTTTTCATCGGTTTCAATGACTTTTGCGGCGGCTTCCGGTGAGTAAACATCAGCAGGTTTCAGGTGAGCCAGTTGTTTTTCGCTTTTTCCGGTcagcag                                                                                                          >  2:304494/1‑140 (MQ=255)
                      ccACTGTTCATAGGTCAGTGACACATTATGACGGAACACTTTTTCATCGGTTTCAATGACTTTTGCGGCGGCTTCCGGTGAGTAAACATCAGCAGGTTTCAGGTGAGCCAGTTGTTTTTCGCTTTTTCCGGTCAGCAGCt                                                                                                        <  2:271852/140‑1 (MQ=255)
                          tGTTCATAGGTCAGTGACACATTATGACGGAACACTTTTTCATCGGTTTCAATGACTTTTGCGGCGGCTTCCGGTGAGGAAACATCAGCAGGTTTCAGGTGAGCCAGTTGTTTTTCGCTTTTTCCGGTCAGCAGCTCCAt                                                                                                    >  1:793736/1‑140 (MQ=255)
                            ttCATAGGTCAGTGACACATTATGACGGAACACTTTTTCATCGGTTTCAATGACTTTTGCGGCGGCTTCCGGTGAGTAAACATCAGCAGGTTTCAGGTGAGCCAGTTGTTTTTCGCTTTTTCCGGTCAGCAGCTCCATcg                                                                                                  >  2:394507/1‑140 (MQ=255)
                              cATAGGTCAGTGACACATTATGACGGAACACTTTTTCATCGGTTTCAATGACTTTTGCGGCGGCTTCCGGTGAGTAAACATCAGCAGGTTTCAGGTGAGCCAGTTGTTTTTCGCTTTTTCCGGTCAGCAGCTCCATcgcg                                                                                                <  1:102604/140‑1 (MQ=255)
                              cATAGGTCAGTGACACATTATGACGGAACACTTTTTCATCGGTTTCAATGACTTTTGCGGCGGCTTCCGGTGAGTAAACATCAGCAGGTTTCAGGTGAGCCAGTTGTTTTTCGCTTTTTCCGGTCAGCAGCTCCATcgcg                                                                                                <  2:634977/140‑1 (MQ=255)
                              cATAGGTCAGTGACACATTATGACGGAACACTTTTTCATCGGTTTCAATGACTTTTGCGGCGGCTTCCGGTGAGTAAACATCAGCAGGTTTCAGGTGAGCCAGTTGTTTTTCGCTTTTTCCGGTCAGCAGCTCCATcgcg                                                                                                <  2:682357/140‑1 (MQ=255)
                                    tCAGTGACACATTATGACGGAACACTTTTTCATCGGTTTCAATGACTTTTGCGGCGGCTTCCGGTGAGTAAACATCAGCAGGTTTCAGGTGAGCCAGTTGTTTTTCGCTTTTTCCGGTCAGCAGCTCCATcg                                                                                                  <  2:1104119/132‑1 (MQ=255)
                                    tCAGTGACACATTATGACGGAACACTTTTTCATCGGTTTCAATGACTTTTGCGGCGGCTTCCGGTGAGTAAACATCAGCAGGTTTCAGGTGAGCCAGTTGTTTTTCGCTTTTTCCGGTCAGCAGCTCCATcg                                                                                                  >  1:1104119/1‑132 (MQ=255)
                                    tCAGTGACACATTATGACGGAACACTTTTTCATCGGTTTCAATGACTTTTGCGGCGGCTTCCGGTGAGTAAACATCAGCAGGTTTCAGGTGAGCCAGTTGTTTTTCGCTTTTTCCGGTCAGCAGCTCCATCGCGCGGTTa                                                                                          >  2:742235/1‑140 (MQ=255)
                                     cAGTGACACATTATGACGGAACACTTTTTCATCGGTTTCAATGACTTTTGCGGCGGCTTCCGGTGAGTAAACATCAGCAGGTTTCAGGTGAGCCAGTTGTTTTTCGCTTTTTCCGGTCAGCAGCTCCATCGCGCGGTTAc                                                                                         <  1:657211/140‑1 (MQ=255)
                                      aGTGACACATTATGACGGAACACTTTTTCATCGGTTTCAATGACTTTTGCGGCGGCTTCCGGTGAGTAAACATCAGCAGGTTTCAGGTGAGCCAGTTGTTTTTCGCTTTTTCCGGTCAGCAGCTCCATCGCGCGGTTACa                                                                                        >  1:1042029/1‑140 (MQ=255)
                                        tGACACATTATGACGGAACACTTTTTCATCGGTTTCAATGACTTTTGCGGCGGCTTCCGGTGAGTAAACATCAGCAGGTTTCAGGTGAGCCAGTTGTTTTTCGCTTTTTCCGGTCAGCAGCTCCATCGCGCGGTTACAGc                                                                                      >  2:20449/1‑140 (MQ=255)
                                             caTTATGACGGAACACTTTTTCATCGGTTTCAATGACTTTTGCGGCGGCTTCCGGTGAGTAAACATCAGCAGGTTTCAGGTGAGCCAGTTGTTTTTCGCTTTTTCCGGTCAGCAGCTCCATCGCGCGGTTACAGCCGGaa                                                                                 >  2:125037/1‑140 (MQ=255)
                                             caTTATGACGGAACACTTTTTCATCGGTTTCAATGACTTTTGCGGCGGCTTCCGGTGAGTAAACATCAGCAGGTTTCAGGTGAGCCAGTTGTTTTTCGCTTTTTCCGGTCAGCAGCTCCATCGCGCGGTTACAGCCGGaa                                                                                 <  1:125037/140‑1 (MQ=255)
                                             caTTATGACGGAACACTTTTTCATCGGTTTCAATGACTTTTGCGGCGGCTTCCGGTGAGTAAACATCAGCAGGTTTCAGGTGAGCCAGTTGTTTTTCGCTTTTTCCGGTCAGCAGCTCCATCGCGCGGTTACAGCCGGaa                                                                                 >  2:1103831/1‑140 (MQ=255)
                                             caTTATGACGGAACACTTTTTCATCGGTTTCAATGACTTTTGCGGCGGCTTCCGGTGAGTAAACATCAGCAGGTTTCAGGTGAGCCAGTTGTTTTTCGCTTTTTCCGGTCAGCAGCTCCATCGCGCGGTTACAGCCGGaa                                                                                 <  1:1082046/140‑1 (MQ=255)
                                               ttATGACGGAACACTTTTTCATCGG‑TTCAATGACTTTTGCGGCGGCTTCCGGTGAGTAAACATCAGCAGGTTTCAGGTGAGCCAGTTGTTTTTCGCTTTTTCCGGTCAGCAGCTCCATCGCGCGGTTACAGCCGGAAAAc                                                                              <  2:566419/140‑1 (MQ=255)
                                                 aTGACGGAACACTTTTTCATCGGTTTCAATGACTTTTGCGGCGGCTTCCGGTGAGTAAACATCAGCAGGTTTCAGGTGAGCCAGTTGTTTTTCGCTTTTTCCGGTCAGCAGCTCCATCGCGCGGTTACAGCCGGAAAAct                                                                             <  1:304494/140‑1 (MQ=255)
                                                  tGACGGAACAC‑TTTTCATCGGTTTCAATGACTTTTGCGGCGGCTTCCGGTGAGTAAACATCAGCAGGTTTCAGGTGAGCCAGTTGTTTTTCGCTTTTTCCGGTCAGCAGCTCCATCGCGCGGTTACAGCCGGAAAActct                                                                           >  2:301348/1‑140 (MQ=255)
                                                    aCGGAACACTTTTTCATCGGTTTCAATGACTTTTGCGGCGGCTTCCGGAGAGTAAACATCAGCAGGTTTCAGGTGAGCCAGTTGTTTTTCGCTTTTTCCGGTCAGCAGCTCCATCGCGCGGTTACAGCCGGAAAACTCtt                                                                          >  1:1020620/1‑140 (MQ=255)
                                                    aCGGAACACTTTTTCATCGGTTTCAATGACTTTTGCGGCGGCTTCCAGTGAGTAAACATCAGCAGGTTTCAGGTGAGCCAGTTGTTTTTCGCTTTTTCCGGTCAGCAGCTCCATCGCGCGGTTACAGCCGGAAAACTCtt                                                                          >  1:81307/1‑140 (MQ=255)
                                                        aaCACTTTTTCATCGGTTTCAATGACTTTTGCGGCGGCTTCCGGTGAGTAAACATCAGCAGGTTTCAGGTGAGCCAGTTGTTTTTCGCTTTTTCCGGTCAGCAGCTCCATCGCGCGGTTACAGCCGGAAAACTCTTTATc                                                                      >  1:849410/1‑140 (MQ=255)
                                                        aaCACTTTTTCATCGGTTTCAATGACTTTTGCGGCGGCTTCCGGTGAGTAAACATCAGCAGGTTTCAGGTGAGCCAGTTGTTTTTCGCTTTTTCCGGTCAGCAGCTCCATCGCGCGGTTACAGCCGGAAAACTCTTTATc                                                                      >  2:859209/1‑140 (MQ=255)
                                                        aaCACTTTTTCATCGGTTTCAATGACTTTTGCGGCGGCTTCCGGTGAGTAAACATCAGCAGATTTCAGGTGAGCCAGTTGTTTTTCGCTTTTTCCGGTCAGCAGCTCCATCGCGCGGTTACAGCCGGAAAACTCTTTATc                                                                      >  1:654156/1‑140 (MQ=255)
                                                          cacTTTTTCATCGGTTTCAATGACTTTTGCGGCGGCTTCCGGTGAGTAAACATCAGCAGGTTTCAGGTGAGCCAGTTGTTTTTCGCTTTTTCCGGTCAGCAGCTCCATCGCGCGGTTACAGCCGGAAAACTCTTTATCtt                                                                    >  1:1088366/1‑140 (MQ=255)
                                                            cTTTTTCATCGGTTTCAATGACTTTTGCGGCGGCTTCCGGTGAGTAAACATCAGCAGGTTTCAGGTAAGCCAGTTGTTTTTCGCTTTTTCCGGTCAGCAGCTCCATCGCGCGGTTACAGCCGGAAAACTCTTTATCTTCg                                                                  >  2:649761/1‑140 (MQ=255)
                                                             tttttCATCGGTTTCAATGACTTTTGCGGCGGCTTCCGGTGAGTAAACATCAGCAGGTTTCAGGTGAGCCAGTTGTTTTTCGCTTTTTCCGGTCAGCAGCTCCATCGCGCGGTTACAGCCGGAAAACTCTTTATCTTCGt                                                                 >  2:191889/1‑140 (MQ=255)
                                                                ttCATCGGTTTCAATGACTTTTGCGGCGGCTTCCGGTGAGTAAACATCAGCAGGTTTCAGGTGAGCCAGTTGTTTTTCGCTTTTTCCGGTCAGCAGCTCCATCGCGCGGTTACAGCCGGAAAACTCTTTATCTTCGTTAc                                                              <  2:431738/140‑1 (MQ=255)
                                                                ttCATCGGTTTCAATGACTTTTGCGGCGGCTTCCGGTGAGTAAACATCAGCAGGTTTCAGGTGAGCCAGTTGTTTTTCGCTTTTTCCGGTCAGCAGCTCCATCGCGCGGTTACAGCCGGAAAACTCTTTATCTTCGTTAc                                                              <  2:896847/140‑1 (MQ=255)
                                                                ttCATCGGTTTCAATGACTTTTGCGGCGGCTTCCGGTGAGTAAACATCAGCAGGTTTCAGGTGAGCCAGTTGTTTTTCGCTTTTTCCGGTCAGCAGCTCCATCGCGCGGTTACAGCCGGAAAACTCTTTATCTTCGTTAc                                                              <  1:1103831/140‑1 (MQ=255)
                                                                ttCATCGGTTTCAATGACTTTTGCGGCGGCTTCCGGTGAGTAAACATCAGCAGGTTTCAGGTGAGCCAGTTGTTTTTCGCTTTTTCCGGTCAGCAGCTCCATCGCGCGGTTACAGCCGGAAAACTCTTTATCTTCGTTAc                                                              <  2:1088366/140‑1 (MQ=255)
                                                                          tCAATGACTTTTGCGGCGGCTTCCGGTGAGTAAACATCAGCAGGTTTCAGGTGAGCCAGTTGTTTTTCGCTTTTTCCGGTCAGCAGCTCCATCGCGCGGTTACAGCCGGAAAACTCTTTATCTTCGTTACGATAAAAAAc                                                    <  2:793736/140‑1 (MQ=255)
                                                                               gACTTTTGCGGCGGCTTCCGGTGAGTAAACATCAGCAGGTTTCAGGTGAGCCAGTTGTTTTTCGCTTTTTCCGGTCAGCAGCTCCATCGCGCGGTTACAGCCGGAAAACTCTTTATCTTCGTTACGATAAAAAACCAGGt                                               <  1:191889/140‑1 (MQ=255)
                                                                                  ttttGCGGCGGCTTCCGGTGAGTAAACATCAGCAGGTTTCAGGTGAGCCAGTTGTTTTTCGCTTTTTCCGGTCAGCAGCTCCATCGCGCGGTTACAGCCGGAAAACTCTTTATCTTCGTTACGATAAAAAACCAGGTCgg                                            >  2:426330/1‑140 (MQ=255)
                                                                                     tGCGGCGGCTTCCGGTGAGTAAACATCAGCAGGTTTCAGGTGAGCCAGTTGTTTTTCGCTTTTTCCGGTCAGCAGCTCCATCGCGCGGTTACAGCCGGAAAACTCTTTATCTTCGTTACGATAAAAAACCAGGTCGGGTg                                         <  2:173291/140‑1 (MQ=255)
                                                                                     tGCGGCGGCTTCCGGTGAGTAAACATCAGCAGGTTTCAGGTGAGCCAGTTGTTTTTCGCTTTTTCCGGTCAGCAGCTCCATCGCGCGGTTACAGCCGGAAAACTCTTTATCTTCGTTACGATAAAAAACCAGGTCGGGTg                                         >  1:1037043/1‑140 (MQ=255)
                                                                                     tGCGGCGGCTTCCAGTGAGTAAACATCAGCAGGTTTCAGGTGAGCCAGTTGTTTTTCGCTTTTTCCGGTCAGCAGCTCCATCGCGCGGTTACAGCCGGAAAACTCTTTATCTTCGTTACGATAAAAAACCAGGTCGGGTg                                         <  2:81307/140‑1 (MQ=255)
                                                                                         gcggcTTCCGGTGAGTAAACATCAGCAGGTTTCAGGTGAGCCAGTTGTTTTTCGCTTTTTCCGGTCAGCAGCTCCATCGCGCGGTTACAGCCGGAAAACTCTTTATCTTCGTTACGATAAAAAACCAGGTCGGGTGAAGc                                     <  1:20449/140‑1 (MQ=255)
                                                                                            gcTTCCGGTGAGTAAACATCAGCAGGTTTCAGGTGAGCCAGTTGTTTTTCGCTTTTTCCGGTCAGCAGCTCCATCGCGCGGTTACAGCCGGAAAACTCTTTATCTTCGTTACGATAAAAAACCAGGTCGGGTGAAGCATc                                  <  1:887670/140‑1 (MQ=255)
                                                                                                 cGGTGAGTAAACATCAGCAGGTTTCAGGTGAGCCAGTTGTTTTTCGCTTTTTCCGGTCAGCAGCTCCATCGCGCGGTTACAGCCGGAAAACTCTTTATCTTCGTTACGATAAAAAACCAGGTCGGGTGAAGCATCaagga                             <  2:1042029/140‑1 (MQ=255)
                                                                                                 cGGTGAGTAAACATCAGCAGGTTTCAGGTGAGCCAGTTGTTTTTCGCTTTTTCCGGTCAGCAGCTCCATCGCGCGGTTACAGCCGGAAAACTCTTTATCTTCGTTACGATAAAAAACCAGGTCGGGTGAAGCATCaagga                             <  1:301348/140‑1 (MQ=255)
                                                                                                   gTGAGTAAACATCAGCAGGTTTCAGGTGAGCCAGTTGTTTTTCGCTTTTTCCGGTCAGCAGCTCCATCGCGCGGTTACAGCCGGAAAACTCTTTATCTTCGTTACGATAAAAAACCAGGTCGGGTGAAGCATCaaggaag                           <  1:859209/140‑1 (MQ=255)
                                                                                                         aaaCATCAGCAGGTTTCAGGTGAGCCAGTTGTTTTTCGCTTTTTCCGGTCAGCAGCTCCATCGCGCGGTTACAGCCGGAAAACTCTTTATCTTCGTTACGATAAAAAACCAGGTCGGGTGAAGCATCAAGGAAGGAACGt                     <  2:454781/140‑1 (MQ=255)
                                                                                                         aaaCATCAGCAGGTTTCAGGTGAGCCAGTTGTTTTTCGCTTTTTCCGGTCAGCAGCTCCATCGCGCGGTTACAGCCGGAAAACTCTTTATCTTCGTTACGATAAAAAACCAGGTCGGGTGAAGCATCAAGGAAGGAACGt                     <  1:426330/140‑1 (MQ=255)
                                                                                                          aaCATCAGCAGGTTTCAGGTGAGCCAGTTGTTTTTCGCTTTTTCCGGTCAGCAGCTCCATCGCGCGGTTACAGCCGGAAAACTCTTTATCTTCGTTACGATAAAAAACCAGGTCGGGTGAAGCATCAAGGAAGGAACGTa                    >  1:141756/1‑140 (MQ=255)
                                                                                                          aaCATCAGCAGATTTCAGGTGAGCCAGTTGTTTTTCGCTTTTTCCGGTCAGCAGCTCCATCGCGCGGTTACAGCCGGAAAACTCTTTATCTTCGTTACGATAAAAAACCAGGTCGGGTGAAGCATCAAGGAAGGAACGTa                    <  2:654156/140‑1 (MQ=255)
                                                                                                              tCAGCAGGTTTCAGGTGAGCCAGTTGTTTTTCGCTTTTTCCGGTCAGCAGCTCCATCGCGCGGTTACAGCCGGAAAACTCTTTATCTTCGTTACGATAAAAAACCAGGTCGGGTGAAGCATCAAGGAAGGAACGTAAGaa                >  1:77762/1‑140 (MQ=255)
                                                                                                                agcagGTTTCAGGTGAGCCAGTTGTTTTTCGCTTTTTCCGGTCAGCAGCTCCATCGCGCGGTTACAGCCGGAAAACTCTTTATCTTCGTTACGATAAAAAACCAGGTCGGGTGAAGCATCAAGGAAGGAACGTAAGAATg              >  1:280145/1‑140 (MQ=255)
                                                                                                                       ttCAGGTGAGCCAGTTGTTTTTCGCTTTTTCCGGTCAGCAGCTCCATCGCGCGGTTACAGCCGGAAAACTCTTTATCTTCGTTACGATAAAAAACCAGGTCGGGTGAAGCATCAAGGAAGGAACGTAAGAAt               >  1:950318/1‑132 (MQ=255)
                                                                                                                       ttCAGGTGAGCCAGTTGTTTTTCGCTTTTTCCGGTCAGCAGCTCCATCGCGCGGTTACAGCCGGAAAACTCTTTATCTTCGTTACGATAAAAAACCAGGTCGGGTGAAGCATCAAGGAAGGAACGTAAGAAt               <  2:950318/132‑1 (MQ=255)
                                                                                                                       ttCAGGTGAGCCAGTTGTTTTTCGCTTTTTCCGGTCAGCAGCTCCATCGCGCGGTTACAGCCGGAAAACTCTTTATCTTCGTTACGATAAAAAACCAGGTCGGGTGAAGCATCAAGGAAGGAACGTAAGAATGAGGATtg       >  2:300309/1‑140 (MQ=255)
                                                                                                                            gTGAGCCAGTTGTTTTTCGCTTTTTCCGGTCAGCAGCTCCATCGCGCGGTTACAGCCGGAAAACTCTTTATCTTCGTTACGATAAAAAACCAGGTCGGGTGAAGCATCAAGGAAGGAACGTAAGAATGAGGATTgctgct  <  1:1068248/140‑1 (MQ=255)
                                                                                                                            gTGAGCCAGTTGTTTTTCGCTTTTTCCGGTCAGCAGCTCCATCGCGCGGTTACAGCCGGAAAACTCTTTATCTTCGTTACGATAAAAAACCAGGTCGGGTGAAGCATCAAGGAAGGAACGTAAGAATGAGGATTgctgct  >  1:1053986/1‑140 (MQ=255)
                                                                                                                                |                                                                                                                                       
TGCGCCCGTCCGGGTAATCCAGCCACTGTTCATAGGTCAGTGACACATTATGACGGAACACTTTTTCATCGGTTTCAATGACTTTTGCGGCGGCTTCCGGTGAGTAAACATCAGCAGGTTTCAGGTGAACCAGTTGTTTTTCGCTTTTTCCGGTCAGCAGCTCCATCGCGCGGTTACAGCCGGAAAACTCTTTATCTTCGTTACGATAAAAAACCAGGTCGGGTGAAGCATCAAGGAAGGAACGTAAGAATGAGGATTGCTGCT  >  NC_000913/3352311‑3352574

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A