Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A8 F28 I1 R1 182 57.1 1926220 99.1% 1908884 138.4

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 596,062 G→A E155K (GAG→AAG)  cusC → copper/silver export system outer membrane channel

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913596,0620GA100.0% 221.4 / NA 62E155K (GAG→AAG) cusCcopper/silver export system outer membrane channel
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base A (27/35);  total (27/35)

GCTGGAGCGGTAATCTTAAAGGGAATACCGCCACGACACGGGAGTTTTCGACCGGCCTTAACGCCAGCTTTGACCTCGATTTTTTCGGTCGCTTAAAGAACATGAGCGAAGCCGAGCGACAAAATTATTTAGCCACTGAGGAAGCTCAGCGCGCGGTGCATATTCTGCTGGTTTCTAATGTCGCGCAAAGCTATTTCAATCAGCAACTGGCGTATGCGCAATTGCAAATAGCCGAAGAAACGCTGCGTAATTATCAGCAGTCATATGCGTT  >  NC_000913/595925‑596195
                                                                                                                                         |                                                                                                                                     
ggtGGAGCGATAATTTAAAAGGGATACCCGCCACGACACGGGAGTTTTCGACCGGCCTTAACGCCAGCTTTGACCTCGATTTTTTCGGTCGCTTAAAGAACATGAGCGAAGCCGAGCGACAAAATTATTTAGCCACTAAg                                                                                                                                     <  2:379111/138‑1 (MQ=255)
        ggTAATCTTAAAGGGAATACCGCCACGACACGGGAGTTTTCGACCGGCCTTAACGCCAGCTTTGACCTCGATTTTTTCGGTCGCTTAAAGAACATGAGCGAAGCCGAGCGACAAAATTATTTAGCCACTAAGGAAGCTCa                                                                                                                             >  2:173457/1‑140 (MQ=255)
             tCTTAAAGGGAATACCGCCACGACACGGGAGTTTTCGACCGGCCTTAACGCCAACTTTGACCTCGATTTTTTCGGTCGCTTAAAGAACATGAGCGAAGCCGAGCGACAAAATTATTTAGCCACTAAGGAAGCTCAgcgcg                                                                                                                        <  2:839260/140‑1 (MQ=255)
              tttAAAGGAAATACCGCCACGACACGGGAGTTTTCGACCGGCCTTAACGCCAGCTTTGACCTCGATTTTTTCGGTCGCTTAAAGAACATGAGCGAAGCCGAGCGACAAAATTATTTAGCCACTAAGGAAGCTCAgcgcgc                                                                                                                       <  2:848147/139‑1 (MQ=255)
              ttaaaaGGAAATACCGCCACGACACGGGAGTTTTCGACCGGCCTTAACGCCAGCTTTGACCTCGATTTTTTCGGTCGCTTAAAGAACATGAGCGAAGCCGAGCGACAAAATTATTTAGCCACTAAGGAAGCTCAgcgcgc                                                                                                                       <  2:238631/137‑1 (MQ=255)
              cTTAAAGGGAATTCCGCCACGACACGGGAGTTTTCGACCGGCCTTAACGCCAGCTTTGACCTCGATTTTTTCGGTCGCTTAAAGAACATGAGCGAAGCCGAGCGACAAAATTATTTAGCCACTAAGGAAGCTCAgcgcgc                                                                                                                       <  1:284077/140‑1 (MQ=255)
              cTTAAAGGGAATACCGCCACGACACGGGAGTTTTCGACCGGCCTTAACGCCAGCTTTGACCTCGATTTTTTCGGTCGCTTAAAGAACATGAGCGAAGCCGAGCGACAAAATTATTTAGCCACTAAGGAAGCTCAgcgcgc                                                                                                                       <  1:942247/140‑1 (MQ=255)
              cTTAAAGGGAATACCGCCACGACACGGGAGTTTTCGACCGGCCTTAACGCCAGCTTTGACCTCGATTTTTTCGGTCGCTTAAAGAACATGAGCGAAGCCGAGCGACAAAATTATTTAGCCACTAAGGAAGCTCAgcgcgc                                                                                                                       <  1:104181/140‑1 (MQ=255)
               ttAAAGGGAATACCGCCACGACACGGGAGTTTTCGACCGGCCTTAACGCCAGCTTTGACCTCGATTTTTTCGGTCGCTTAAAGAACATGAGCGAAGCCGAGCGACAAAATTATTTAGCCACTAAGGAAGCTCAGcgcgcg                                                                                                                      <  1:267861/140‑1 (MQ=255)
                 aaaGGGAATACCGCCACGACACGGGAGTTTTCGACCGGCCTTAACGCCAGCTTTGACCTCGATTTTTTCGGTCGCTTAAAGAACATGAGCGAAGCCGAGCGACAAAATTATTTAGCCACTAAGGAAGCTCAGCGCGCGGt                                                                                                                    <  1:173457/140‑1 (MQ=255)
                   aGGGAATACCGCCACGACACGGGAGTTTTCGACCGGCCTTAACGCCAGCTTCGACCTCGATTTTTTCGGTCGCTTAAAGAACATGAGCGAAGCCGAGCGACAAAATTATTTAGCCACTAAGGAAGCTCAGCGCGCGGTGc                                                                                                                  <  2:405111/140‑1 (MQ=255)
                       aaTACCGCCACGACACGGGAGTTTTCGACCGGCCTTAACGCCAGCTTTGACCTCGATTTTTTCGGTCGCTTAAAGAACATGAGCGAAGCCGAGCGACAAAATTATTTAGCCACTAAGGAAGCTCAgcgcgc                                                                                                                       >  1:879112/1‑131 (MQ=255)
                       aaTACCGCCACGACACGGGAGTTTTCGACCGGCCTTAACGCCAGCTTTGACCTCGATTTTTTCGGTCGCTTAAAGAACATGAGCGAAGCCGAGCGACAAAATTATTTAGCCACTAAGGAAGCTCAgcgcgc                                                                                                                       <  2:879112/131‑1 (MQ=255)
                       aaTACCGCCACGACACGGGAGTTTTCGACCGGCCTTAACGCCAGCTTTGACCTCGATTTTTTCGGTCGCTTAAAGAACATGAGCGAAGCCGAGCGACAAAATTATTTAGCCACTAAGGAAGCTCAGCGCGCGGTGc                                                                                                                  >  1:437242/1‑136 (MQ=255)
                       aaTACCGCCACGACACGGGAGTTTTCGACCGGCCTTAACGCCAGCTTTGACCTCGATTTTTTCGGTCGCTTAAAGAACATGAGCGAAGCCGAGCGACAAAATTATTTAGCCACTAAGGAAGCTCAGCGCGCGGTGc                                                                                                                  <  2:437242/136‑1 (MQ=255)
                         tACCGCCACGACACGGGAGTTTTCGACCGGCCTTAACGCCAGCTTTGACCTCGATTTTTTCGGTCGCTTAAAGAACATGAGCGAAGCCGAGCGACAAAATTATTTAGCCACTAAGGAAGCTCAGCGCGCGGTGCATATTc                                                                                                            >  1:348267/1‑140 (MQ=255)
                            cGCCACGACACGGGAGTTTTCGACCGGCCTTAACGCCAGCTTTGACCTCGATTTTTTCGGTCGCTTAAAGAACATGAGCGAAGCCGAGCGACAAAATTATTTAGCCACTAAGGAAGCTCAGcgcgcg                                                                                                                      <  1:615894/127‑1 (MQ=255)
                            cGCCACGACACGGGAGTTTTCGACCGGCCTTAACGCCAGCTTTGACCTCGATTTTTTCGGTCGCTTAAAGAACATGAGCGAAGCCGAGCGACAAAATTATTTAGCCACTAAGGAAGCTCAGcgcgcg                                                                                                                      >  2:615894/1‑127 (MQ=255)
                             gCCACGACACGGGAGTTTTCGACCGGCCTTAACGCCAGCTTTGACCTCGATTTTTTCGGTCGCTTAAAGAACATGAGCGAAGCCGAGCGACAAAATTATTTAGCCACTAAGGAAGCTCAGCGCGCGGTGCATATTctgct                                                                                                        <  1:482989/140‑1 (MQ=255)
                             gCCACGACACGGGAGTTTTCGACCGGCCTTAACGCCAGCTTTGACCTCGATTTTTTCGGTCGCTTAAAGAACATGAGCGAAGCCGAGCGACAAAATTATTTAGCCACTAAGGAAGCTCAGCGCGCGGTGCATATTctgct                                                                                                        <  1:719942/140‑1 (MQ=255)
                              ccACGACACGGGAGTTTTCGACCGGCCTTAACGCCAGCTTTGACCTCGATTTTTTCGGTCGCTTAAAGAACATGAGCGAAGCCGAGCGACAAAATTATTTAGCCACTAAGGAAGCTCAGCGCGCGGTGCATATTctgctg                                                                                                       >  1:245941/1‑140 (MQ=255)
                              ccACGACACGGGAGTTTTCGACCGGCCTTAACGCCAGCTTTGACCTCGATTTTTTCGGTCGCTTAAAGAACATGAGCGAAGCCGAGCGACAAAATTATTTAGCCACTAAGGAAGCTCAGCGCGCGGTGCATATTctgctg                                                                                                       <  1:164893/140‑1 (MQ=255)
                                      cGGGAGTTTTCGACCGGCCTTAACGCCAGCTTTGACCTCGATTTTTTCGGTCGCTTAAAGAACATGAGCGAAGCCGAGCGACAAAATTATTTAGCCACTAAGGAAGCTCAGCGCGCGGTGCATATTctgctg                                                                                                       <  2:336372/132‑1 (MQ=255)
                                      cGGGAGTTTTCGACCGGCCTTAACGCCAGCTTTGACCTCGATTTTTTCGGTCGCTTAAAGAACATGAGCGAAGCCGAGCGACAAAATTATTTAGCCACTAAGGAAGCTCAGCGCGCGGTGCATATTctgctg                                                                                                       >  1:336372/1‑132 (MQ=255)
                                         gAGTTTTCGACCGGCCTTAACGCCAGCTTTGACCTCGATTTTTTCGGTCGCTTAAAGAACATGAGCGAAGCCGAGCGACAAAATTATTTAGCCACTAAGGAAGCTCAGCGCGCGGTGCATATTCTGCTGGTTTCTAATGt                                                                                            >  2:5671/1‑140 (MQ=255)
                                         gAGTTTTCGACCGGCCTTAACGCCAGCTTTGACCTCGATTTTTTCGGTCGCTTAAAGAACATGAGCGAAGCCGAGCGACAAAATTATTTAGCCACTAAGGAAGCTCAGCGCGCGGTGCATATTCTGCTGGTTTCTAATGt                                                                                            >  2:704113/1‑140 (MQ=255)
                                              ttCGACCGGCCTTAACGCCAGCTTTGACCTCGATTTTTTCGGTCGCTTAAAGAACATGAGCGAAGCCGAGCGACAAAATTATTTAGCCACTAAGGAAGCTCAGCGCGCGGTGCATATTCTGCTGGTTTCTAATGTCgcgc                                                                                       <  1:952808/140‑1 (MQ=255)
                                                      gCCTTAACGCCAGCTTTGACCTCGATTTTTTCGGTCGCTTAAAGAACATGAGCGAAGCCGAGCGACAAAATTATTTAGCCACTAAGGAAGCTCAGCGCGCGGTGCATATTCTGCTGGTTTCTAATGTCgcgc                                                                                       >  2:363329/1‑132 (MQ=255)
                                                      gCCTTAACGCCAGCTTTGACCTCGATTTTTTCGGTCGCTTAAAGAACATGAGCGAAGCCGAGCGACAAAATTATTTAGCCACTAAGGAAGCTCAGCGCGCGGTGCATATTCTGCTGGTTTCTAATGTCgcgc                                                                                       <  1:363329/132‑1 (MQ=255)
                                                      gCCTTAACGCCAGCTTTGACCTCGATTTTTTCGGTCGCTTAAAGAACATGAGCGAAGCCGAGCGACAAAATTATTTAGCCACTAAGGAAGCTCAGCGCGCGGTGCATATTCTGCTGGTTTCTAATGTCGCGCAAAGCTAt                                                                               <  2:285663/140‑1 (MQ=255)
                                                               ccAGCTTTGACCTCGATTTTTTCGGTCGCTTAAAGAACATGAGCGAAGCCGAGCGACAAAATTATTTAGCCACTAAGGAAGCTCAGCGCGCGGTGCATATTCTGCTGGTTTCTAATGTCGCGCAAAGCTATTTCAATCAg                                                                      <  2:698517/140‑1 (MQ=255)
                                                                 aGCTTTGACCTCGATTTTTTCGGTCGCTTAAAGAACATGAGCGAAGCCGAGCGACAAAATTATTTAGCCACTAAGGAAGCTCAGCGCGCGGTGCATATTCTGCTGGTTTCTAATGTCGCGCAAAGCTATTTCAATCAGCa                                                                    >  1:900704/1‑140 (MQ=255)
                                                                 aGCTTTGACCTCGATTTTTTCGGTCGCTTAAAGAACATGAGCGAAGCCGAGCGACAAAATTATTTAGCCACTAAGGAAGCTCAGCGCGCGGTGCATATTCTGCTGGTTTCTAATGTCGCGCAAAGCTATTTCAATCAGCa                                                                    >  1:325781/1‑140 (MQ=255)
                                                                 aGCTTTGACCTCGATTTTTTCGGTCGCTTAAAGAACATGAGCGAAGCCGAGCGACAAAATTATTTAGCCACTAAGGAAGCTCAGCGCGCGGTGCATATTCTGCTGGTTTCTAATGTCGCGCAAAGCTATTTCAATCAGCa                                                                    >  1:429434/1‑140 (MQ=255)
                                                                 aGCTTTGACCTCGATTTTTTCGGTCGCTTAAAGAACATGAGCGAAGCCGAGCGACAAAATTATTTAGCCACTAAGGAAGCTCAGCGCGCGGGGCATATTCTGCTGGTTTCTAATGTCGCGCAAAGCTATTTCAATCAGCa                                                                    >  1:611105/1‑140 (MQ=255)
                                                                   cTTTGACCTCGATTTTTTCGGTCGCTTAAAGAACATGAGCGAAGCCGAGCGACAAAATTATTTAGCCACTAAGGAAGCTCAGCGCGCGGTGCATATTCTGCTGGTTTCTAATGTCGCGCAAAGCTATTTCAATCAGCAAc                                                                  <  2:670600/140‑1 (MQ=255)
                                                                   cTTTGACCTCGATTTTTTCGGTCGCTTAAAGAACATGAGCGAAGCCGAGCGACAAAATTATTTAGCCACTAAGGAAGCTCAGCGCGCGGTGCATATTCTGCTGGTTTCTAATGTCGCGCAAAGCTATTTCAATCAGCAAc                                                                  >  2:425345/1‑140 (MQ=255)
                                                                        aCCTCGATTTTTTCGGTCGCTTAAAGAACATGAGCGAAGCCGAGCGACAAAATTATTTAGCCACTAAGGAAGCTCAGCGCGCGGTGCATATTCTGCTGGTTTCTAATGTCGCGCAAAGCTATTTCAATCAGCAACTGGCg                                                             >  2:466851/1‑140 (MQ=255)
                                                                         ccTCGATTTTTTCGGTCGCTTAAAGAACATGAGCGAAGCCGAGCGACAAAATTATTTAGCCACTAAGGAAGCTCAGCGCGCGGTGCATATTCTGCTGGTTTCTAATGTCGCGCAAAGCTATTTCAATCAGCAACTGGCGt                                                            <  2:245941/140‑1 (MQ=255)
                                                                            cGATTTTTTCGGTCGCTTAAAGAACATGAGCGAAGCCGAGCGACAAAATTATTTAGCCACTAAGGAAGCTCAGCGCGCGGTGCATATTCTGCTGGTTTCTAATGTCGCGCAAAGCTATTTCAATCAGCAACTGGCGTATg                                                         <  1:425345/140‑1 (MQ=255)
                                                                              aTTTTTTCGGTCGCTTAAAGAACATGAGCGAAGCCGAGCGACAAAATTATTTAGCCACTAAGGAAGCTCAGCGCGCGGTGCATATTCTGCTGGTTTCTAATGTCGCGCAAAGCTATTTCAATCAGCAACTGGCGTATgcg                                                       <  1:352107/140‑1 (MQ=255)
                                                                                            ttAAAGAACATGAGCGAAGCCGAGCGACAAAATTATTTAGCCACTAAGGAAGCTCAGCGCGCGGTGCATATTCTGCTGGTTTCTAATGTCGCGCAAAGCTATTTCAATCAGCAACTGGCGTATGCGCAATTGCAAATAGc                                         <  2:618085/140‑1 (MQ=255)
                                                                                                    cATGAGCGAAGCCGAGCGGCAAAATTATTTAGCCACTAAGGAAGCTCAGCGCGCGGTGCATATTCTGCTGGTTTCTAATGTCGCGCAAAGCTATTTCAATCAGCAACTGGCGTATGCGCAATTGCAAATAGCCGAAGaaa                                 >  2:27731/1‑140 (MQ=255)
                                                                                                    cATGAGCGAAGCCGAGCGACAAAATTATTTAGCCACTAAGGAAGCTCAGCGCGCGGTGCATATTCTGCTGGTTTCTAATGTCGCGCAAAGCTATTTCAATCAGCAACTGGCGTATGCGCAATTGCAAATAGCCGAAGaaa                                 >  2:956741/1‑140 (MQ=255)
                                                                                                      tGAGCGAAGCCGAGCGACAAAATTATTTAGCCACTAAGGAAGCTCAGCGCGCGGTGCATATTCTGCTGGTTTCTAATGTCGCGCAAAGCTATTTCAATCAGCAACTGGCGTATGCGCAATTGCAAATAGCCGAAGAAACg                               >  2:406300/1‑140 (MQ=255)
                                                                                                      tGAGCGAAGCCGAGCGACAAAATTATTTAGCCACTAAGGAAGCTCAGCGCGCGGTGCATATTCTGCTGGTTTCTAATGTCGCGCAAAGCTATTTCAATCAGCAACTGGCGTATGCGCAATTGCAAATAGCCGAAGAAACg                               >  1:559733/1‑140 (MQ=255)
                                                                                                        aGCGAAGCCGAGCGACAAAATTATTTAGCCACTAAGGAAGCTCAGCGCGCGGTGCATATTCTGCTGGTTTCTAATGTCGCGCAAAGCTATTTCAATCAGCAACTGGCGTATGCGCAATTGCAAATAGCCGAAGAAACGCt                             <  1:466851/140‑1 (MQ=255)
                                                                                                         gCGAAGCCGAGCGACAAAATTATTTAGCCACTAAGGAAGCTCAGCGCGCGGTGCATATTCTGCTGGTTTCTAATGTCGCGCAAAGCTATTTCAATCAGCAACTGGCGTATGCGCAATTGCAAATAGCCGAAGAAACGCTg                            <  2:559733/140‑1 (MQ=255)
                                                                                                         gCGAAGCCGAGCGACAAAATTATTTAGCCACTAAGGAAGCTCAGCGCGCGGTGCATATTCTGCTGGTTTCTAATGTCGCGCAAAGCTATTTCAATCAGCAACTGGCGTATGCGCAATTGCAAATAGCCGAAGAAACGCTg                            >  1:768214/1‑140 (MQ=255)
                                                                                                              gCCGAGCGACAAAATTATTTAGCCACTAAGGAAGCTCAGCGCGCGGTGCATATTCTGCTGGTTTCTAATGTCGCGCAAAGCTATTTCAATCAGCAACTGGCGTATGCGCAATTGCAAATAGCCGAAGAAACGCTGCGTaa                       >  1:930950/1‑140 (MQ=255)
                                                                                                              gCCGAGCGACAAAATTATTTAGCCACTAAGGAAGCTCAGCGCGCGGTGCATATTCTGCTGGTTTCTAATGTCGCGCAAAGCTATTTCAATCAGCAACTGGCGTATGCGCAATTGCAAATAGCCGAAGAAACGCTGCGTaa                       >  1:796479/1‑140 (MQ=255)
                                                                                                              gCCGAGCGACAAAATTATTTAGCCACTAAGGAAGCTCAGCGCGCGGTGCATATTCTGCTGGTTTCTAATGTCGCGCAAAGCTATTTCAATCAGCAACTGGCGTATGCGCAATTGCAAATAGCCGAAGAAACGCTGCGTaa                       <  1:108162/140‑1 (MQ=255)
                                                                                                                  aGCGACAAAATTATTTAGCCACTAAGGAAGCTCAGCGCGCGGTGCATATTCTGCTGGTTTCTAATGTCGCGCAAAGCTATTTCAATCAGCAACTGGCGTATGCGCAATTGCAAATAGCCGAAGAAACGCTGCGTAATTAt                   >  2:121987/1‑140 (MQ=255)
                                                                                                                  aGCGACAAAATTATTTAGCCACTAAGGAAGCTCAGCGCGCGGTGCATATTCTGCTGGTTTCTAATGTCGCGCAAAGCTATTTCAATCAGCAACTGGCGTATGCGCAATTGCAAATAGCCGAAGAAACGCTGCGTAATTAt                   >  2:886094/1‑140 (MQ=255)
                                                                                                                  aGCGACAAAATTATTTAGCCACTAAGGAAGCTCAGCGCGCGGTGCATATTCTGCTGGTTTCTAATGTCGCGCAAAGCTATTTCAATCAGCAACTGGCGTATGCGCAATTGCAAATAGCCGAAGAAACGCTGCGTAATTAt                   <  2:348267/140‑1 (MQ=255)
                                                                                                                    cGACAAAATTATTTAGCCACTAAGGAAGCTGAGCGCGCGGTGCATATTCTGCTGGTTTCTAATGTCGCGCAAAGCTATTTCAATCAGCAACTGGCGTATGCGCAATTGCAAATAGCCGAAGAAACGCTGCGTAATTATca                 <  2:589093/140‑1 (MQ=255)
                                                                                                                    cGACAAAATTATTTAGCCACTAAGGAAGCTCAGCGCGCGGTGCATATTCTGCTGGTTTCTAATGTCGCGCAAAGCTATTTCAATCAGCAACTGGCGTATGCGCAATTGCAAATAGCCGAAGAAACGCTGCGTAATTATca                 <  2:96694/140‑1 (MQ=255)
                                                                                                                       cAAAATTATTTAGCCACTAAGGAAGCTCAGCGCGCGGTGCATATTCTGCTGGTTTCTAATGTCGCGCAAAGCTATTTCAATCAGCAACTGGCGTATGCGCAATTGCAAATAGCCGAAGAAACGCTGCGTAATTATcagca              <  1:956741/140‑1 (MQ=255)
                                                                                                                       cAAAATTATTTAGCCACTAAGGAAGCTCAGCGCGCGGTGCATATTCTGCTGGTTTCTAATGTCGCGCAAAGCTATTTCAATCAGCAACTGGCGTATGCGCAATTGCAAATAGCCGAAGAAACGCTGCGTAATTATcagca              >  1:445061/1‑140 (MQ=255)
                                                                                                                       cAAAATTATTTAGCCACTAAGGAAGCTCAGCGCGCGGTGCATATTCTGCTGGTTTCTAATGTCGCGCAAAGCTATTTCAATCAGCAACTGGCGTATGCGCAATTGCAAATAGCCGAAGAAACGCTGCGTAATTATcagc               <  2:746444/139‑1 (MQ=255)
                                                                                                                       cAAAATTATTTAGCCACTAAGGAAGCTCAGCGCGCGGTGCATATTCTGCTGGTTTCTAATGTCGCGCAAAGCTATTTCAATCAGCAACTGGCGTATGCGCAATTGCAAATAGCCGAAGAAACGCTGCGTAATTATcagc               >  1:746444/1‑139 (MQ=255)
                                                                                                                                   gCCACTAAGGAAGCTCAGCGCGCGGTGCATATTCTGCTGGTTTCTAATGTCGCGCAAAGCTATTTCAATCAGCAACTGGCGTATGCGCAATTGCAAATAGCCGAAGAAACGCTGCGTAATTATCAGCAGTCATATGCGtt  <  2:429434/140‑1 (MQ=255)
                                                                                                                                         |                                                                                                                                     
GCTGGAGCGGTAATCTTAAAGGGAATACCGCCACGACACGGGAGTTTTCGACCGGCCTTAACGCCAGCTTTGACCTCGATTTTTTCGGTCGCTTAAAGAACATGAGCGAAGCCGAGCGACAAAATTATTTAGCCACTGAGGAAGCTCAGCGCGCGGTGCATATTCTGCTGGTTTCTAATGTCGCGCAAAGCTATTTCAATCAGCAACTGGCGTATGCGCAATTGCAAATAGCCGAAGAAACGCTGCGTAATTATCAGCAGTCATATGCGTT  >  NC_000913/595925‑596195

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A