Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A4 F28 I1 R1
|
128 |
54.7 |
1845674 |
99.3% |
1832754 |
139.4 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,496,567 |
A→C |
D6A (GAC→GCC) |
nirD → |
nitrite reductase subunit NirD |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,496,567 | 0 | A | C | 100.0%
| 254.8
/ NA
| 68 | D6A (GAC→GCC) | nirD | nitrite reductase subunit NirD |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base C (32/36); total (32/36) |
ACTTCATCAACAGCGACAAGCGTGACCCGAACGTGCAGATGGTGCCAGAGCGCGAACAGCACCGTCCGGCAACGCCGTATGAACGTATCCCAGTAACTCTGGTGGAGGACAACGCATGAGCCAGTGGAAAGACATCTGCAAAATCGATGACATCCTGCCTGAAACCGGCGTCTGCGCGCTGTTAGGTGACGAGCAGGTCGCGATTTTCCGCCCGTATCACAGCGATCAGGTGTTTGCGATCAGCAACATCGACCCGTTCTTCGA > NC_000913/3496436‑3496699
|
acTTCATCAACAGCGACAAGCGTGACCCGAACGTGCAGATGGCGCCAGAGCGCGAACAGCACCGTCCGGCAACGCCGTATGAACGTATCCCAGTAACTCTGGTGGAGGACAACGCATGAGCCAGTGGAAAGCCATCTGCa < 1:517696/140‑1 (MQ=255)
cTTCATCAACAGCGACAAGCGTGACCCGAACGTGCAGATGGTGCCAGAGCGCGAACAGCACCGTCCGGCAACGCCGTATGAACGTATCCCAGTAACTCTGGTGGAGGACAACGCATGAGCCAGTGGAAAGCCATCTGCaa < 2:884166/140‑1 (MQ=255)
ttCATCAACAGCGACAAGCGTGACCCGAACGTGCAGATGGTGCCAGAGCGCGAACAGCACCGTCCGGCAACGCCGTATGAACGTATCCCAGTAACTCTGGTGGAGGACAACGCATGAGCCAGTGGAAAGCCATCTGCaaa < 1:193582/140‑1 (MQ=255)
tcatcaACAGCGACAAGCGTGACCCGAACGTGCAGATGGTGCCAGAGCGCGAACAGCACCGTCCGGCAACGCCGTATGAACGTATCCCAGTAACTCTGGTGGAGGACAACGCATGAGCCAGTGGAAAGCCATCTGCaaaa > 1:378707/1‑140 (MQ=255)
catcaACAGCGACAAGCGTGACCCGAACGTGCAGATGGTGCCAGAGCGCGAACAGCACCGTCCGGCAACGCCGTATGAACGTATCCCAGTAACTCTGGTGGAGGACAACGCATGAGCCAGTGGAAAGCCATCTGCAAAAt < 1:47005/140‑1 (MQ=255)
cAGCGACAAGCGTGACCCGAACGTGCAGATGGTGCCAGAGCGCGAACAGCACCGTCCGGCAACGCCGTATGAACGTATCCCAGTAACTCTGGTGGAGGACAACGCATGAGCCAGTGGAAAGCCATCTGCAAAATCGATGa > 1:273027/1‑140 (MQ=255)
gCGACAAGCGTGACCCGAACGTGCAGATGGTGCCAGAGCGCGAACAGCACCGTCCGGCAACGCCGTATGAACGTATCCCAGTAACTCTGGTGGAGGACAACGCATGAGCCAGTGGAAAGCCATCTGCa < 2:522616/128‑1 (MQ=255)
gCGACAAGCGTGACCCGAACGTGCAGATGGTGCCAGAGCGCGAACAGCACCGTCCGGCAACGCCGTATGAACGTATCCCAGTAACTCTGGTGGAGGACAACGCATGAGCCAGTGGAAAGCCATCTGCa > 1:522616/1‑128 (MQ=255)
gCGACAAGCGTGACCCGAACGTGCAGATGGTGCCAGAGCGCGAACAGCACCGTCCGGCAACGCCGTATGAACGTATCCCAGTAACTCTGGTGGAGGACAACGCATGAGCCAGTGGAAAGCCATCTGCAAAATCGATGACa > 1:243720/1‑140 (MQ=255)
gCGACAAGCGTGACCCGAACGTGCAGATGGTGCCAGAGCGCGAACAGCACCGTCCGGCAACGCCGTATGAACGTATCCCAGTAACTCTGGTGGAGGACAACGCATGAGCCAGTGGAAAGCCATCTGCAAAATCGATGACa > 2:480773/1‑140 (MQ=255)
gCGACAAGCGTGACCCGAACGTGCAGATGGTGCCAGAGCGCGAACAGCACCGTCCGGCAACGCCGTATGAACGTATCCCAGTAACTCTGGTGGAGGACAACGCATGAGCCAGTGGAAAGCCATCTGCAAAATCGATGACa > 1:363980/1‑140 (MQ=255)
gCGACAAGCGTGACCCGAACGTGCAGATGGTGCCAGAGCGCGAACAGCACCGTCCGGCAACGCCGTATGAACGTATCCCAGTAACTCTGGTGGAGGACAACGCATGAGCCAGTGGAAAGCCATCTGCAAAATCGATGACa > 2:455258/1‑140 (MQ=255)
gACAAGCGTGACCCGAACGTGCAGATGGTGCCAGAGCGCGAACAGCACCGTCCGGCAACGCCGTATGAACGTATCCCAGTAACTCTGGTGGAGGACAACGCATGAGCCAGTGGAAAGCCATCTGCAAAATCGATGACATc < 2:383229/140‑1 (MQ=255)
gACAAGCGTGACCCGAACGTGCAGATGGTGCCAGAGCGCGAACAGCACCGACCGGCAACGCCGTATGAACGTATCCCAGTAACTCTGGTGGAGGACAACGCATGAGCCAGTGGAAAGCCATCTGCAAAATCGATGACATc < 1:316286/140‑1 (MQ=255)
aCAAGCGTGACCCGAACGTGCAGATGGTGCCAGAGCGCGAACAGCACCGTCCGGCAACGCCGTATGAACGTATCCCAGTAACTCTGGTGGAGGACAACGCATGAGCCAGTGGAAAGCCATCTGCAAAATCGATGACATcc < 1:58885/140‑1 (MQ=255)
cAAGCGTGACCCGAACGTGCAGATGGTGCCAGAGCGCGAACAGCACCGTCCGGCAACGCCGTATGAACGTATCCCAGTAACTCTGGTGGAGGACAACGCATGAGCCAGTGGAAAGCCATCTGCAAAATCGATGACATcct < 2:378707/140‑1 (MQ=255)
aGCGTGACCCGAACGTGCAGATGGTGCCAGAGCGCGAACAGCACCGTCCGGCAACGCCGTATGAACGTATCCCAGTAACTCTGGTGGAGGACAACGCATGAGCCAGTGGAAAGCCATCTGCAAAATCGATGACATcctgc > 2:394890/1‑140 (MQ=255)
aCCCGAACGTGCAGATGGTGCCAGAGCGCGAACAGCACCGTCCGGCAACGCCGTATGAACGTATCCCAGTAACTCTGGTGGAGGACAACGCATGAGCCAGTGGAAAGCCATCTGCAAAATCGATGACATCCTGCCTGaaa > 2:378381/1‑140 (MQ=255)
cGTGCAGATGGTGCCAGAGCGCGAACAGCACCGTCCGGCAACGCCGTATGAACGTATCCCAGTAACTCTGGTGGAGGACAACGCATGAGCCAGTGGAAAGCCATCTGCAAAATCGATGACATCCTGCCTGAAACCGGCGt < 1:686610/140‑1 (MQ=255)
tGCAGATGGTGCCAGAGCGCGAACAGCACCGTCCGGCAACGCCGTATGAACGTATCCCAGTAACTCTGGTGGAGGACAACGCATGAGCCAGTGGAAAGCCATCTGCAAAATCGATGACATCCTGCCTGAAACCGGCGTCt < 2:375567/140‑1 (MQ=255)
gATGGTGCCAGAGCGCGAACAGCACCGTCCGGCAACGCCGTATGAACGTATCCCAGTAACTCTGGTGGAGGACAACGCATGAGCCAGTGGAAAGCCATCTGCAAAATCGATGACATCCTGCCTGAAACCGGCGTCTgcgc < 1:378381/140‑1 (MQ=255)
aTGGTGCCAGAGCGCGAACAGCACCGTCCGGCAACGCCGTATGAACGTATCCCAGTAACTCTGGTGGAGGACAACGCATGAGCCAGTGGAAAGCCATCTGCAAAATCGATGACATCCTGCCTGAAACCGGCGTCTgcgcg < 2:371494/140‑1 (MQ=255)
aTGGTGCCAGAGCGCGAACAGCACCGTCCGGCAACGCCGTATGAACGTATCCCAGTAACTCTGGTGGAGGACAACGCATGAGCCAGTGGAAAGCCATCTGCAAAATCGATGACATCCTGCCTGAAACCGGCGTCTgcgcg < 1:480773/140‑1 (MQ=255)
aTGGTGCCAGAGCGCGAACAGCACCGTCCGGCAACGCCGTATGAACGTATCCCAGTAACTCTGGTGGAGGACAACGCATGAGCCAGTGGAAAGCCATCTGCAAAATCGATGACATCCTGCCTGAAACCGGCGTCTgcgcg < 1:911355/140‑1 (MQ=255)
aTGGTGCCAGAGCGCGAACAGCACCGTCCGGCAACGCCGTATGAACGTATCCCAGTAACTCTGGTGGAGGACAACGCATGAGCCAGTGGAAAGCCATCTGCAAAATCGATGACATCCTGCCTGAAACCGGCGTCTgcgcg < 1:89189/140‑1 (MQ=255)
aTGGTGCCAGAGCGCGAACAGCACCGTCCGGCAACGCCGTATGAACGTATCCCAGTAACTCTGGTGGAGGACAACGCATGAGCCAGTGGAAAGCCATCTGCAAAATCGATGACATCCTGCCTGAAACCGGCGTCTgcgcg < 1:371646/140‑1 (MQ=255)
aTGGTGCCAGAGCGCGAACAGCACCGTCCGGCAACGCCGTATGAACGTATCCCAGTAACTCTGGTGGAGGACAACGCATGAGCCAGTGGAAAGCCATCTGCAAAATCGATGACATCCTGCCTGAAACCGGCGTCTgcgcg < 1:69562/140‑1 (MQ=255)
gCCAGAGCGCGAACAGCACCGTCCGGCAACGCCGTATGAACGTATCCCAGTAACTCTGGTGGAGGACAACGCATGAGCCAGTGGAAAGCCATCTGCAAAATCGATGACATCCTGCCTGAAACCGGCGTCTGCGCGCTGtt < 2:921730/140‑1 (MQ=255)
gCCAGAGCGCGAACAGCACCGTCCGACAACGCCGTATGAACGTATCCCAGTAACTCTGGTGGAGGACAACGCATGAGCCAGTGGAAAGCCATCTGCAAAATCGATGACATCCTGCCTGAAACCGGCGTCTgcg < 2:454506/133‑1 (MQ=255)
gCCAGAGCGCGAACAGCACCGTCCGACAACGCCGTATGAACGTATCCCAGTAACTCTGGTGGAGGACAACGCATGAGCCAGTGGAAAGCCATCTGCAAAATCGATGACATCCTGCCTGAAACCGGCGTCTgcg > 1:454506/1‑133 (MQ=255)
cAGAGCGCGAACAGCACCGTCCGGCAACGCCGTATGAACGTATCCCAGTAACTCTGGTGGAGGACAACGCATGAGCCAGTGGAAAGCCATCTGCAAAATCGATGACATCCTGCCTGAAACCGGCGTCTGCGCGCTGTTAg < 1:394890/140‑1 (MQ=255)
gagCGCGAACAGCACCGTCCGGCAACGCCGTATGAACGTATCCCAGTAACTCTGGTGGAGGACAACGCATGAGCCAGTGGAAAGCCATCTGCAAAATCGATGACATCCTGCCTGAAACCGGCGTCTGCGCGCTGTTAGGt < 1:278800/140‑1 (MQ=255)
agCGCGAACAGCACCGTCCGGCAACGCCGTATGAACGTATCCCAGTAACTCTGGTGGAGGACAACGCATGAGCCAGTGGAAAGCCATCTGCAAAATCGATGACATCCTGCCTGAAACCGGCGTCTGCGCGCTGTTAGGTg > 1:274875/1‑140 (MQ=255)
cgAACAGCACCGTCCGGCAACGCCGTATGAACGTATCCCAGTAACTCTGGTGGAGGACAACGCATGAGCCAGTGGAAAGCCATCTGCAAAATCGATGACATCCTGCCTGAAACCGGCGTCTGCGCGCTGTTAGGTGACGa > 2:512903/1‑140 (MQ=255)
cgAACAGCACCGTCCGGCAACGCCGTATGAACGTATCCCAGTAACTCTGGTGGAGGACAACGCATGAGCCAGTGGAAAGCCATCTGCAAAATCGATGACATCCTGCCTGAAACCGGCGTCTGCGCGCTGTTAGGTGACGa > 1:389831/1‑140 (MQ=255)
cgAACAGCACCGTCCGGCAACGCCGTATGAACGTATCCCAGTAACTCTGGTGGAGGACAACGCATGAGCCAGTGGAAAGCCATCTGCAAAATCGATGACATCCTGCCTGAAACCGGCGTCTGCGCGCTGTTAGGTGACGa > 1:804923/1‑140 (MQ=255)
ggCCACGCCGTATGAAAGTATCCCAGTAACTCTGGTGGAGGACAACGGATGAGCCAGTGGAAAGCCATCTGCAAAATCGATGACATCCTGCCTGAAACCGGCGTCTGCGCGCTGTTAGGAGACGAGCAGGTCGCGAtttt < 2:639450/140‑1 (MQ=255)
aCGCCGTATGAACGTATCCCAGTAACTCTGGTGGAGGACAACGCATGAGCCAGTGGAAAGCCATCTGCAAAATCGATGACATCCTGCCTGAAACCGGCGTCTGCGCGCTGTTAGGTGACGAGCAGGTCGCGATTTTCCGc < 1:110865/140‑1 (MQ=255)
aCGCCGTATGAACGTATCCCAGTAACTCTGGTGGAGGACAACGCATGAGCCAGTGGAAAGCCATCTGCAAAATCGATGACATCCTGCCTGAAACCGGCGTCTGCGCGCTGTTAGGTGACGAGCAGGTCGCGATTTTCCGc < 2:243720/140‑1 (MQ=255)
tATGAACGTATCCCAGTAACTCTGGTGGAGGACAACGCATGAGCCAGTGGAAAGCCATCTGCAAAATCGATGACATCCTGCCTGAAACCGGCGTCTGCGCGCTGTTAGGTGACGAGCAGGTCGCGATTTTcc < 2:719358/132‑1 (MQ=255)
tATGAACGTATCCCAGTAACTCTGGTGGAGGACAACGCATGAGCCAGTGGAAAGCCATCTGCAAAATCGATGACATCCTGCCTGAAACCGGCGTCTGCGCGCTGTTAGGTGACGAGCAGGTCGCGATTTTcc > 1:719358/1‑132 (MQ=255)
tGAACGTATCCCAGTAACTCTGGTGGAGGACAACGCATGAGCCAGTGGAAAGCCATCTGCAAAATCGATGACATCCTGTCTGAAACCGGCGTCTGCGCGCTGTTAGGTGACGAGCAGGTCGCGATTTTCCGCCCGTATca < 1:835352/140‑1 (MQ=255)
aaCGTATCCCAGTAACTCTGGTGGAGGACAACGCATGAGCCAGTGGAAAGCCATCTGCAAAATCGATGACATCCTGCCTGAAACCGGCGTCTGCGCGCTGTTAGGTGACGAGCAGGTCGCGATTTTCCGCCCGTATcaca < 2:439793/140‑1 (MQ=255)
aCGTATCCCAGTAACTCTGGTGGAGGACAACGCATGAGCCAGTGGAAAGCCATCTGCAAAATCGATGACATCCTGCCTGAAACCGGCGTCTGCGCGCTGTTAGGTGACGAGCAGGTCGCGATTTTCCGCCCGTATCACAg > 1:413045/1‑140 (MQ=255)
tCCCAGTAACTCTGGTGGAGGACAACGCATGAGCCAGTGGAAAGCCATCTGCAAAATCGATGACATCCTGCCTGAAACCGGCGTCTGCGCGCTGTTAGGTGACGAGCAGGTCGCGATTTTCCGCCCGTATCACAGCGATc > 2:896725/1‑140 (MQ=255)
cAGTAACTCTGGTGGAGGACAACGCATGAGCCAGTGGAAAGCCATCTGCAAAATCGATGACATCCTGCCTGAAACCGGCGTCTGCGCGCTGTTAGGTGACGAGCAGGTCGCGATTTTCCGCCCGTATCACAGCGATCAgg < 1:871669/140‑1 (MQ=255)
cAGTAACTCTGGTGGAGGACAACGCATGAGCCAGTGGAAAGCCATCTGCAAAATCGATGACATCCTGCCTGAAACCGGCGTCTGCGCGCTGTTAGGTGACGAGCAGGTCGCGATTTTCCGCCCGTATCACAGCGATCAgg < 1:455258/140‑1 (MQ=255)
cAGTAACTCTGGTGGAGGACAACGCATGAGCCAGTGGAAAGCCATCTGCAAAATCGATGACATCCTGCCTGAAACCGGCGTCTGCGCGCTGTTAGGTGACGAGCAGGTCGCGATTTTCCGCCCGTATCACAGCGATCAgg < 1:452511/140‑1 (MQ=255)
gTAACTCTGGTGGAGGACAACGCATGAGCCAGTGGAAAGCCATCTGCAAAATCGATGACATCCTGCCTGAAACCGGCGTCTGCGCGCTGTTAGGTGACGAGCAGGTCGCGATTTTCCGCCCGTATCACAGCGATCAGgtg > 1:508995/1‑140 (MQ=255)
aaCTCTGGTGGAGGACAACGCATGAGCCAGTGGAAAGCCATCTGCAAAATCGATGACATCCTGCCTGAAACCGGCGTCTGCGCGCTGTTAGGTGACGAGCAGGTCGCGATTTTCCGCCCGTATCACAGCGATCAGGTGtt > 2:871748/1‑140 (MQ=255)
ctGGTGGAGGACAACGCATGAGCCAGTGGAAAGCCATCTGCAAAATCGATGACAGCCTGCCTGAAACCGGCGTCTGCGCGCTGTTAGGTGACGAGCAGGTCGCGATTTTCCGCCTGTATCTCAGCGGTCACGTGTTTGCg < 2:195149/140‑1 (MQ=255)
tggtggAGGACAACGCATGAGCCAGTGGAAAGCCATCTGCAAAATCGATGACATCCTGCCTGAAACCGGCGTCTGCGCGCTGTTAGGTGACGAGCAGGTCGCGATTTTCCGCCCGTATCACAGCGATCAGGTGTTTGCGa > 2:904764/1‑140 (MQ=255)
ggtggAGGACAACGCATGAGCCAGTGGAAAGCCATCTGCAAAATCGATGACATCCTGCCTGAAACCGGCGTCTGCGCGCTGTTAGGTGACGAGCAGGTCGCGATTTTCCGCCCGTATCACAGCGATCAGGTGTTTGCGAt > 1:623842/1‑140 (MQ=255)
ggtggAGGACAACGCATGAGCCAGTGGAAAGCCATCTGCAAAATCGATGACATCCTGCCTGAAACCGGCGTCTGCGCGCTGTTAGGTGACGAGCAGGTCGCGATTTTCCGCCCGTATCACAGCGATCAGGTGTTTGCGAt < 2:413045/140‑1 (MQ=255)
tggAGGACAACGCATGAGCCAGTGGAAAGCCATCTGCAAAATCGATGACATCCTGCCTGAAACCGGCGTCTGCGCGCTGTTAGGTGACGAGCAGGTCGCGATTTTCCGCCCGTATCACAGCGATCAGGTGTTTGCGATCa > 2:586818/1‑140 (MQ=255)
ggaggaCAACGCATGAGCCAGTGGAAAGCCATCTGCAAAATCGATGACATCCTGCCTGAAACCGGCGTCTGCGCGCTGTTAGGTGACGAGCAGGTCGCGATTTTCCGCCCGTATCACAGCGATCAGGTGTTTGCGATCAg < 1:320923/140‑1 (MQ=255)
aggaCAACGCATGAGCCAGTGGAAAGCCATCTGCAAAATCGATGACATCCTGCCTGAAACCGGCGTCTGCGCGCTGTTAGGTGACGAGCAGGTCGCGATTTTCCGCCCGTATCACAGCGATCAGGTGTTTGCGATCAGCa > 1:880457/1‑140 (MQ=255)
gaCAACGCATGAGCCAGTGGAAAGCCATCTGCAAAATCGATGACATCCTGCCTGAAACCGGCGTCTGCGCGCTGTTAGGTGACGAGCAGGTCGCGATTTTCCGCCCGTATCACAGCGATCAGGTGTTTGCGATCAGCAAc > 2:429585/1‑140 (MQ=255)
gaCAACGCATGAGCCAGTGGAAAGCCATCTGCAAAATCGATGACATCCTGCCTGAAACCGGCGTCTGCGCGCTGTTAGGTGACGAGCAGGTCGCGATTTTCCGCCCGTATCACAGCGATCAGGTGTTTGCGATCAGCAAc > 1:79451/1‑140 (MQ=255)
gaCAACGCATGAGCCAGTGGAAAGCCATCTGCAAAATCGATGACATCCTGCCTGAAACCGGCGTCTGCGCGCTGTTAGGTGACGAGCAGGTCGCGATTTTCCGCCCGTATCACAGCGATCAGGTGTTTGCGATCAGCAAc > 1:49806/1‑140 (MQ=255)
aCAACGCATGAGCCAGTGGAAAGCCATCTGCAAAATCGATGACATCCTGCCTGAAACCGGCGTCTGCGCGCTGTTAGGTGACGAGCAGGTCGCGATTTTCCGCCCGTATCACAGCGATCAGGTGTTTGCGATCAGCAACa > 2:724322/1‑140 (MQ=255)
cAACGCATGAGCCAGTGGAAAGCCATCTGCAAAATCGATGACATCCTGCCTGAAACCGGCGTCTGCGCGCTGTTAGGTGACGAGCAGGTCGCGATTTTCCGCCCGTATCACAGCGATCAGGTGTTTGCGATCAGCAACAt > 1:793748/1‑140 (MQ=255)
aCGCATGAGCCAGTGGAAAGCCATCTGCAAAATCGATGACATCCTGCCTGAAACCGGCGTCTGCGCGCTGTTAGGTGACGAGCAGGTCGCGATTTTCCGCCCGTATCACAGCGATCAGGTGTTTGCGATCAGCAACATCg > 1:723092/1‑140 (MQ=255)
cGCATGAGCCAGTGGAAAGCCATCTGCAAAATCGATGACATCCTGCCTGAAACCGGCGTCTGCGCGCTGTTAGGTGACGAGCAGGTCGCGATTTTCCGCCCGTATCACAGCGATCAGGTGTTTGCGATCAGCAACATCGa > 1:783034/1‑140 (MQ=255)
cGCATGAGCCAGTGGAAAGCCATCTGCAAAATCGATGACATCCTGCCTGAAACCGGCGTCTGCGCGCTGTTAGGTGACGAGCAGGTCGCGATTTTCCGCCCGTATCACAGCGATCAGGTGTTTGCGATCAGCAACATCGa > 1:597642/1‑140 (MQ=255)
cATGAGCCAGTGGAAAGCCATCTGCAAAATCGATGACATCCTGCCTGAAACCGGCGTCTGCGCGCTGTTAGGTGACGAGCAGGTCGCGATTTTCCGCCCGTATCACAGCGATCAGGTGTTTGCGATCAGCAACATCGAcc < 1:724322/140‑1 (MQ=255)
tGAGCCAGTGGAAAGCCATCTGCAAAATCGATGACATCCTGCCTGAAACCGGCGTCTGCGCGCTGTTAGGTGACGAGCAGGTCGCGATTTTCCGCCCGTATCACAGCGATCAGGTGTTTGCGATCAGCAACATCGACCCg < 2:793748/140‑1 (MQ=255)
gAGCCAGTGGAAAGCCATCTGCAAAATCGATGACATCCTGCCTGAAACCGGCGTCTGCGCGCTGTTAGGTGACGAGCAGGTCGCGATTTTCCGCCCGTATCACAGCGATCAGGTGTTTGCGATCAGCAACATCGACCCGt < 1:429585/140‑1 (MQ=255)
cAGTGGAAAGCCATCTGCAAAATCGATGACATCCTGCCTGAAACCGGCGTCTGCGCGCTGTTAGGTGACGAGCAGGTCGCGATTTTCCGCCCGTATCACAGCGATCAGGTGTTTGCGATCAGCAACATCGACCCGttctt < 2:880457/140‑1 (MQ=255)
tGGAAAGCCATCTGCAAAATCGATGACATCCTGCCTGAAACCGGCGTCTGCGCGCTGTTAGGTGACGAGCAGGTCGCGATTTTCCGCCCGTATCACAGCGATCAGGTGTTTGCGATCAGCAACATCGACCCGTTCTTCGa > 2:541422/1‑140 (MQ=255)
|
ACTTCATCAACAGCGACAAGCGTGACCCGAACGTGCAGATGGTGCCAGAGCGCGAACAGCACCGTCCGGCAACGCCGTATGAACGTATCCCAGTAACTCTGGTGGAGGACAACGCATGAGCCAGTGGAAAGACATCTGCAAAATCGATGACATCCTGCCTGAAACCGGCGTCTGCGCGCTGTTAGGTGACGAGCAGGTCGCGATTTTCCGCCCGTATCACAGCGATCAGGTGTTTGCGATCAGCAACATCGACCCGTTCTTCGA > NC_000913/3496436‑3496699
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
