Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A10 F28 I1 R1 116 72.9 2471836 99.3% 2454533 138.7

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,185,389 A→G intergenic (+259/‑25) ubiK → / → ygiL ubiquinone biosynthesis accessory factor UbiK/putative fimbrial protein YgiL

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,185,3890AG98.4% 224.6 / ‑5.1 63intergenic (+259/‑25)ubiK/ygiLubiquinone biosynthesis accessory factor UbiK/putative fimbrial protein YgiL
Reads supporting (aligned to +/- strand):  ref base A (0/1);  new base G (38/24);  total (38/25)
Fisher's exact test for biased strand distribution p-value = 3.97e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

ATAATTGCAATGTATTTTTTAAGTTTTACTTAATCGATATTTAGATAAACTAATTTTATAAAAAACACAAAATAAAATATCATATTTCAATGATTAGTAGTCCTTAAATAACAGTTACTAATCATTCTCTTTTCTACTTATCTTTATATAAAGGAATATTATGTCCGCTTTTAAAAAGTCACTTCTTGTTGCTGGCGTAGCAATGATTCTTTCCAATAACGTGTTTGCTGATGAAGGTCACGGTATTGTTAAATTTAAAGGTGAAGTTATCT  >  NC_000913/3185254‑3185525
                                                                                                                                       |                                                                                                                                        
ataATTGCAATGTATTTTTTAAGTTTTACTTAATCGATATTTAGATAAACTAATTTTATAAAAAACACAAAATAAAATATCATATTTCAATGATTAGTAGTCCTTAAATAACAGTTACTAATCATTCTCTTTTCTGCTTa                                                                                                                                      >  2:574986/1‑140 (MQ=255)
          tGTATTTTTTAAGTTTTACTTAATCGATATTTAGATAAACTAATTTTATAAAAAACACAAAATAAAATATCATATTTCAATGATTAGTAGTCCTTAAATAACAGTTACTAATCATTCTCTTTTCTGCTTATCTTtatata                                                                                                                            <  1:919172/140‑1 (MQ=255)
          tGTATTTTTTAAGTTTTACTTAATCGATATTTAGATAAACTAATTTTATAAAAAACACAAAATAAAATATCATATTTCAATGATTAGTAGTCCTTAAATAACAGTTACTAATCATTCTCTTTTCTGCTTATCTTtatata                                                                                                                            <  1:18511/140‑1 (MQ=255)
             aTTTTTTAAGTTTTACTTAATCGATATTTAGATAAACTAATTTTATAAAAAACACAAAATAAAATATCATATTTCAATGATTAGTAGTCCTTAAATAACAGTTACTAATCATTCTCTTTTCTGCTTATCTTTATATAAAg                                                                                                                         <  1:40477/140‑1 (MQ=255)
                                        ttAGATAAACTAATTTTATAAAAAACACAAAATAAAATATCATATTTCAATGATTAGTAGTCCTTAAATAACAGTTACTAATCATTCTCTTTTCTGCTTATCTTTATATAAAGGAATATTATGTCCGCTTTTAAAAAGTc                                                                                              <  1:920963/140‑1 (MQ=255)
                                            aTAAACTAATTTTATAAAAAACACAAAATAAAATATCATATTTCAATGATTAGTAGTCCTTAAATAACAGTTACTAATCATTCTCTTTTCTGCTTATCTTTATATAAAGGAATATTATGTCCGCTTTTAAAAAGTCActt                                                                                          >  2:975553/1‑140 (MQ=255)
                                               aaCTAATTTTATAAAAAACACAAAATAAAATATCATATTTCAATGATTAGTAGTCCTTAAATAACAGTTACTAATCATTCTCTTTTCTGCTTATCTTTATATAAAGGAATATTGTGTCCGCTTTTAAAAAGTCActtctt                                                                                       >  1:863155/1‑140 (MQ=255)
                                                aCTAATTTTATAAAAAACACAAAATAAAATATCATATTTCAATGATTAGTAGTCCTTAAATAACAGTTACTAATCATTCTCTTTTCTGCTTATCTTTATATAAAGGAATATTATGTCCGCTTTTAAAAAGTCACTTCttg                                                                                      >  2:834250/1‑140 (MQ=255)
                                                 cTAATTTTATAAAAAACACAAAATAAAATATCATATTTCAATGATTAGTAGTCCTTAAATAACAGTTACTAATCATTCTCTTTTCTGCTTATCTTTATATAAAGGAATATTATGTCCGCTTTTAAAAAGTCACTTCttgt                                                                                     >  2:140693/1‑140 (MQ=255)
                                                         ataAAAAACACAAAATAAAATATCATATTTCAATGATTAGTAGTCCTTAAATAACAGTTACTAATCATTCTCTTTTCTGCTTATCTTTATATAAAGGAATATTATGTCCGCTTTTAAAAAGTCACTTCTTGTTGCTGGCg                                                                             >  1:307279/1‑140 (MQ=255)
                                                          taAAAAACACAAAATAAAATATCATATTTCAATGATTAGTAGTCCTTAAATAACAGTTACTAATCATTCTCTTTTCTGCTTATCTTTATATAAAGGAATATTATGTCCGCTTTTAAAAAGTCACTTCTTGTTGCTGGCGt                                                                            <  2:1117932/140‑1 (MQ=255)
                                                          taAAAAACACAAAATAAAATATCATATTTCAATGATTAGTAGTCCTTAAATAACAGTTACTAATCATTCTCTTTTCTGCTTATCTTTATATAAAGGAATATTATGTCCGCTTTTAAAAAGTCACTTCTTGTTGCTGGCGt                                                                            >  2:454945/1‑140 (MQ=255)
                                                                    aaaataaaatATCATATTTCAATGATTAGTAGTCCTTAAATAACAGTTACTAATCATTCTCTTTTCTGCTTATCTTTATATAAAGGAATATTATGTCCGCTTTTAAAAAGTCACTTCTTGTTGCTGGCGTAGCAATGAtt                                                                  <  1:574986/140‑1 (MQ=255)
                                                                           aataTCATATTTCAATGATTAGTAGTCCTTAAATAACAGTTACTAATCATTCTCTTTTCTGCTTATCTTTATATAAAGGAATATTATGTCCGCTTTTAAAAAGTCACTTCTTGTTGCTGGCGTAGCAATGATTCTTTCCa                                                           >  2:519185/1‑140 (MQ=255)
                                                                              atCATATTTCAATGATTAGTAGTCCTTAAATAACAGTTACTAATCATTCTCTTTTCTGCTTATCTTTATATAAAGGAATATTATGTCCGCTTTTAAAAAGTCACTTCTTGTTGCTGGCGTAGCAATGATTCTTTCCAATa                                                        >  2:844565/1‑140 (MQ=255)
                                                                                cATATTTCAATGATTAGTAGTCCTTAAATAACAGTTACTAATCATTCTCTTTTCTGCTTATCTTTATATAAAGGAATATTATGTCCGCTTTTAAAAAGTCACTTCTTGTTGCTGGCGTAGCAATGATTCTTTCCAATAAc                                                      >  2:822487/1‑140 (MQ=255)
                                                                                cATATTTCAATGATTAGTAGTCCTTAAATAACAGTTACTAATCATTCTCTTTTCTGCTTATCTTTATATAAAGGAATATTATGTCCGCTTTTAAAAAGTAACTTCTTGTTGCTGGCGTAGCAATGATTCTTTCCAATAAc                                                      >  2:30925/1‑140 (MQ=255)
                                                                                  tatTTCAATGATTAGTAGTCCTTAAATAACAGTTACTAATCATTCTCTTTTCTGCTTATCTTTATATAAAGGAATATTATGTCCGCTTTTAAAAAGTCACTTCTTGTTGCTGGCGTAGCAATGATTCTTTCCAATAACgt                                                    >  2:319060/1‑140 (MQ=255)
                                                                                  tatTTCAATGATTAGTAGTCCTTAAATAACAGTTACTAATCATTCTCTTTTCTGCTTATCTTTATATAAAGGAATATTATGTCCGCTTTTAAAAAGTCACTTCTTGTTGCTGGCGTAGCAATGATTCTTTCCAATAACgt                                                    >  2:691696/1‑140 (MQ=255)
                                                                                       cAATGATTAGTAGTCCTTAAATAACAGTTACTAATCATTCTCTTTTCTGCTTATCTTTATATAAAGGAATATTATGTCCGCTTTTAAAAAGTCACTTCTTGTTGCTGGCGTAGCAATGATTCTTTCCAATAACGTGTTTg                                               <  2:307279/140‑1 (MQ=255)
                                                                                       cAATGATTAGTAGTCCTTAAATAACAGTTACTAATCATTCTCTTTTCTGCTTATCTTTATATAAAGGAATATTATGTCCGCTTTTAAAAAGTCACTTCTTGTTGCTGGCGTAGCAATGATTCTTTCCAATAACGTGTTTg                                               >  1:691046/1‑140 (MQ=255)
                                                                                       cAATGATTAGTAGTCCTTAAATAACAGTTACTAATCATTCTCTTTTCTGCTTATCTTTATATAAAGGAATATTATGTCCGCTTTTAAAAAGTCACTTCTTGTTGCTGGCGTAGCAATGATTCTTTCCAATAACGTGTTTg                                               >  1:320542/1‑140 (MQ=255)
                                                                                            aTTAGTAGTCCTTAAATAACAGTTACTAATCATTCTCTTTTCTGCTTATCTTTATATAAAGGAATATTATGTCCGCTTTTAAAAAGTCACTTCTTGTTGCTGGCGTAGCAATGATTCTTTCCAATAACGTGTTTGCtgat                                          >  2:274334/1‑140 (MQ=255)
                                                                                            aTTAGTAGTCCTTAAATAACAGTTACTAATCATTCTCTTTTCTGCTTATCTTTATATAAAGGAATATTATGTCCGCTTTTAAAAAGTCACTTCTTGTTGCTGGCGTAGCAATGATTCTTTCCAATAACGTGTTTGCtgat                                          >  1:779492/1‑140 (MQ=255)
                                                                                             ttAGTAGTCCTTAAATAACAGTTACTAATCATTCTCTTTTCTGCTTATCTTTATATAAAGGAATATTATGTCCGCTTTTAAAAAGTCACTTCTTGTTGCTGGCGTAGCAATGATTCTTTCCAATAACGTGTTTGCtgatg                                         <  1:454945/140‑1 (MQ=255)
                                                                                             ttAGTAGTCCTTAAATAACAGTTACTAATCATTCTCTTTTCTGCTTATCTTTATATAAAGGAATATTATGTCCGCTTTTAAAAAGTCACTTCTTGTTGCTGGCGTAGCAATGATTCTTTCCAATAACGTGTTTGCtgatg                                         <  2:691046/140‑1 (MQ=255)
                                                                                              tagtagTCCTTAAATAACAGTTACTAATCATTCTCTTTTCTGCTTATCTTTATATAAAGGAATATTATGTCCGCTTTTAAAAAGTCACTTCTTGTTGCTGGCGTAGCAATGATTCTTTCCAATAACGTGTTTGCtgatga                                        >  2:657153/1‑140 (MQ=255)
                                                                                               agtagtCCTTAAATAACAGTTACTAATCATTCTCTTTTCTGCTTATCTTTATATAAAGGAATATTATGTCCGCTTTTAAAAAGTCACTTCTTGTTGCTGGCGTAGCAATGATTCTTTCCAATAACGTGTTTGCTGATGaa                                       >  2:940031/1‑140 (MQ=255)
                                                                                                 tagtCCTTAAATAACAGTTACTAATCATTCTCTTTTCTGCTTATCTTTATATAAAGGAATATTATGTCCGCTTTTAAAAAGTCACTTCTTGTTGCTGGCGTAGCAATGATTCTTTCCAATAACGTGTTTGCTGATGAAgg                                     <  1:1136899/140‑1 (MQ=255)
                                                                                                 tagtCCTTAAATAACAGTTACTAATCATTCTCTTTTCTGCTTATCTTTATATAAAGGAATATTATGTCCGCTTTTAAAAAGTCACTTCTTGTTGCTGGCGTAGCAATGATTCTTTCCAATAACGTGTTTGCTGATGAAgg                                     <  1:822487/140‑1 (MQ=255)
                                                                                                  agtCCTTAAATAACAGTTACTAATCATTCTCTTTTCTGCTTATCTTTATATAAAGGAATATTATGTCCGCTTTTAAAAAGTCACTTCTTGTTGCTGGCGTAGCAATGATTCTTTCCAATAACGTGTTTGCTGATGAAGGt                                    <  1:844565/140‑1 (MQ=255)
                                                                                                      cTTAAATAACAGTTACTAATCATTCTCTTTTCTGCTTATCTTTATATAAAGGAATATTATGTCCGCTTTTAAAAAGTCACTTCTTGTTGCTGGCGTAGCAATGATTCTTTCCAATAACGTGTTTGCTGATGAAGGTCACg                                >  1:1167453/1‑140 (MQ=255)
                                                                                                      cTTAAATAACAGTTACTAATCATTCTCTTTTCTGCTTATCTTTATATAAAGGAATATTATGTCCGCTTTTAAAAAGTCACTTCTTGTTGCTGGCGTAGCAATGATTCTTTCCAATAACGTGTTTGCTGATGAAGGTCACg                                >  2:134668/1‑140 (MQ=255)
                                                                                                      cTTAAATAACAGTTACTAATCATTCTCTTTTCTGCTTATCTTTATATAAAGGAATATTATGTCCGCTTTTAAAAAGTCACTTCTTGTTGCTGGCGTAGCAATGATTCTTTCCAATAACGTGTTTGCTGATGAAGGTCACg                                >  1:501253/1‑140 (MQ=255)
                                                                                                      cTTAAATAACAGTTACTAATCATTCTCTTTTCTGCTTATCTTTATATAAAGGAATATTATGTCCGCTTTTAAAAAGTCACTTCTTGTTGCTGGCGTAGCAATGATTCTTTCCAATAACGTGTTTGCTGATGAAGGTCACg                                >  2:258975/1‑140 (MQ=255)
                                                                                                      cTTAAATAACAGTTACTAATCATTCTCTTTTCTGCTTATCTTTATATAAAGGAATATTATGTCCGCTTTTAAAAAGTCACTTCTTGTTGCTGGCGTAGCAATGAGTCTTTCCAATAACGTGTTTGCTGATGAAGGTCACg                                >  2:848864/1‑140 (MQ=255)
                                                                                                        tAAATAACAGTTACTAATCATTCTCTTTTCTGCTTATCTTTATATAAAGGAATATTATGTCCGCTTTTAAAAAGTCACTTCTTGTTGCTGGCGTAGCAATGATTCTTTCCAATAACGTGTTTGCTGATGAAGGTCACGGt                              >  1:583441/1‑140 (MQ=255)
                                                                                                         aaaTAACAGTTACTAATCATTCTCTTTTCTGCTTATCTTTATATAAAGGAATATTATGTCCGCTTTTAAAAAGTCACTTCTTGTTGCTGGCGTAGCAATGATTCTTTCCAATAACGTGTTTGCTGATGAAGGTCACGGTa                             <  1:274334/140‑1 (MQ=255)
                                                                                                              aCAGTTACTAATCATTCTCTTTTCTGCTTATCTTTATATAAAGGAATATTATGTCCGCTTTTAAAAAGTCACTTCTTGTTGCTGGCGTAGCAATGATTCTTTCCAATAACGTGTTTGCTGATGAAGGTCa                                  >  1:1048605/1‑130 (MQ=255)
                                                                                                              aCAGTTACTAATCATTCTCTTTTCTGCTTATCTTTATATAAAGGAATATTATGTCCGCTTTTAAAAAGTCACTTCTTGTTGCTGGCGTAGCAATGATTCTTTCCAATAACGTGTTTGCTGATGAAGGTCa                                  <  2:1048605/130‑1 (MQ=255)
                                                                                                              aCAGTTACTAATCATTCTCTTTTCTGCTTATCTTTATATAAAGGAATATTATGTCCGCTTTTAAAAAGTCACTTCTTGTTGCTGGCGTAGCAATGATTCTTTCCAATAACGTGTTTGCTGATGAAGGTCACGGTATTGtt                        >  2:455861/1‑140 (MQ=255)
                                                                                                               cAGTTACTAATCATTCTCTTTTCTGCTTATCTTTATATAAAGGAATATTATGTCCGCTTTTAAAAAGTCACTTCTTGTTGCTGGCGTAGCAATGATTCTTTCCAATAACGTGTTTGCTGATGAAGGTCACGGTATTGTTa                       >  1:139268/1‑140 (MQ=255)
                                                                                                               cAGTTACTAATCATTCTCTTTTCTGCTTATCTTTATATAAAGGAATATTATGTCCGCTTTTAAAAAGTCACTTCTTGTTGCTGGCGTAGCAATGATTCTTTCCAATAACGTGTTTGCTGATGAAGGTCACGGTATTGTTa                       >  1:35183/1‑140 (MQ=255)
                                                                                                                aGTTACTAATCATTCTCTTTTCTGCTTATCTTTATATAAAGGAATATTATGTCCGCTTTTAAAAAGTCACTTCTTGTTGCTGGCGTAGCAATGATTCTTTCCAATAACGTGTTTGCTGATGAAGGTCACGGTATTGTTaa                      >  2:527156/1‑140 (MQ=255)
                                                                                                                 gTTACTAATCATTCTCTTTTCTGCTTATCTTTATATAAAGGAATATTATGTCCGCTTTTAAAAAGTCACTTCTTGTTGCTGGCGTAGCAATGATTCTTTCCAATAACGTGTTTGCTGATGAAGGTCACGGTATTGTTaaa                     >  2:1225604/1‑140 (MQ=255)
                                                                                                                  ttACTAATCATTCTCTTTTCTGCTTATCTTTATATAAAGGAATATTATGTCCGCTTTTAAAAAGTCACTTCTTGTTGCTGGCGTAGCAATGATTCTTTCCAATAACGTGTTTGCTGATGAAGGTCACGGTATCGTTAAAt                    >  1:327835/1‑140 (MQ=255)
                                                                                                                   tACTAATCATTCTCTTTTCTACTTATCTTTATATAAAGGAATATTATGTCCGCTTTTAAAAAGTCACTTCTTGTTGCTGGCGTAGCAATGATTCTTTCCAATAACGTGTTTGCTGATGAAGGTCACGGTATTGTTAAAtt                   <  2:493695/140‑1 (MQ=255)
                                                                                                                    aCTAATCATTCTCTTTTCTGCTTATCTTTATATAAAGGAATATTATGTCCGCTTTTAAAAAGTCACTTCTTGTTGCTGGCGTAGCAATGATTCTTTCCAATAACGTGTTTGCTGATGAAGGTCACGGTATTGTTAAAttt                  >  1:209714/1‑140 (MQ=255)
                                                                                                                    aCTAATCATTCTCTTTTCTGCTTATCTTTATATAAAGGAATATTATGTCCGCTTTTAAAAAGTCACTTCTTGTTGCTGGCGTAGCAATGATTCTTTCCAATAACGTGTTTGCTGATGAAGGTCACGGTATTGTTAAAttt                  >  1:274736/1‑140 (MQ=255)
                                                                                                                     cTAATCATTCTCTTTTCTGCTTATCTTTATATAAAGGAATATTATGTCCGCTTTTAAAAAGTCACTTCTTGTTGCTGGCGTAGCAATGATTCTTTCCAATAACGTGTTTGCTGATGAAGGTCACGGTATTGTTAAATTTa                 <  1:455861/140‑1 (MQ=255)
                                                                                                                          cATTCTCTTTTCTGCTTATCTTTATATAAAGGAATATTATGTCCGCTTTTAAAAAGTCACTTCTTGTTGCTGGCGTAGCAATGATTCTTTCCAATAACGTGTTTGCTGATGAAGGTCACGGTATTGTTAAATTTAAAGGt            <  2:274736/140‑1 (MQ=255)
                                                                                                                          cATTCTCTTTTCTGCTTATCTTTATATAAAGGAATATTATGTCCGCTTTTAAAAAGTCACTTCTTGTTGCTGGCGTAGCAATGATTCTTTCCAATAACGTGTTTGCTGATGAAGGTCACGGTATTGTTAAATTTAAAGGt            >  1:62493/1‑140 (MQ=255)
                                                                                                                          cATTCTCTTTTCTGCTTATCTTTATATAAAGGAATATTATGTCCGCTTTTAAAAAGTCACTTCTTGTTGCTGGCGTAGCAATGATTCTTTCCAATAACGTGTTTGCTGATGAAGGTCACGGTATTGTTAAATTTAAAGGt            <  1:69335/140‑1 (MQ=255)
                                                                                                                            ttCTCTTTTCTGCTTATCTTTATATAAAGGAATATTATGTCCGCTTTTAAAAAGTCACTTCTTGTTGCTGGCGTAGCAATGATTCTTTCCAATAACGTGTTTGCTGATGAAGGTCACGGTATTGTTAAATTTAAAg              >  1:36746/1‑136 (MQ=255)
                                                                                                                            ttCTCTTTTCTGCTTATCTTTATATAAAGGAATATTATGTCCGCTTTTAAAAAGTCACTTCTTGTTGCTGGCGTAGCAATGATTCTTTCCAATAACGTGTTTGCTGATGAAGGTCACGGTATTGTTAAATTTAAAg              <  2:36746/136‑1 (MQ=255)
                                                                                                                            ttCTCTTTTCTGCTTATCTTTATATAAAGGAATATTATGTCCGCTTTTAAAAAGTCACTTCTTGTTGCTGGCGTAGCAATGATTCTTTCCAATAACGTGTTTGCTGATGAAGGTCACGGTATTGTTAAATTTAAAGGTGa          >  1:358642/1‑140 (MQ=255)
                                                                                                                             tctcTTTTCTGCTTATCTTTATATAAAGGAATATTATGTCCGCTTTTAAAAAGTCACTTCTTGTTGCTGGCGTAGCAATGATTCTTTCCAATAACGTGTTTGCTGATGAAGGTCACGGTATTGTTAAATTTAAAGGTGaa         <  2:358642/140‑1 (MQ=255)
                                                                                                                             tctcTTTTCTGCTTATCTTTATATAAAGGAATATTATGTCCGCTTTTAAAAAGTCACTTCTTGTTGCTGGCGTAGCAATGATTCTTTCCAATAACGTGTCTGCTGATGAAGGTCACGGTATTGTTAAATTTAAAGGTGaa         >  2:617573/1‑140 (MQ=255)
                                                                                                                               tctTTTCTGCTTATCTTTATATAAAGGAATATTATGTCCGCTTTTAAAAAGTCACTTCTTGTTGCTGGCGTAGCAATGATTCTTTCCAATAACGTGTTTGCTGATGAAGGTCACGGTATTGTTAAATTTAAAGGTGAAGt       <  2:320542/140‑1 (MQ=255)
                                                                                                                               tctTTTCTGCTTATCTTTATATAAAGGAATATTATGTCCGCTTTTAAAAAGTCACTTCTTGTTGCTGGCGTAGCAATGATTCTTTCCAATAACGTGTTTGCTGATGAAGGTCACGGTATTGTTAAATTTAAAGGTGAAGt       <  1:834250/140‑1 (MQ=255)
                                                                                                                                    tCTGCTTATCTTTATATAAAGGAATATTATGTCCGCTTTTAAAAAGTCACTTCTTGTTGCTGGCGTAGCAATGATTCTTTCCAATAACGTGTTTGCTGATGAAGGTCACGGTATTGTTAAATTTAAAGGTGAAGTTAtct  <  2:501253/140‑1 (MQ=255)
                                                                                                                                    tCTGCTTATCTTTATATAAAGGAATATTATGTCCGCTTTTAAAAAGTCACTTCTTGTTGCTGGCGTAGCAATGATTCTTTCCAATAACGTGTTTGCTGATGAAGGTCACGGTATTGTTAAATTTAAAGGTGAAGTTAtct  <  2:1167453/140‑1 (MQ=255)
                                                                                                                                    tCTGCTTATCTTTATATAAAGGAATATTATGTCCGCTTTTAAAAAGTAACTTCTTGTTGCTGGCGTAGCAATGATTCTTTCCAATAACGTGTTTGCTGATGAAGGTCACGGTATTGTTAAATTTAAAGGTGAAGTTAtct  <  1:30925/140‑1 (MQ=255)
                                                                                                                                       |                                                                                                                                        
ATAATTGCAATGTATTTTTTAAGTTTTACTTAATCGATATTTAGATAAACTAATTTTATAAAAAACACAAAATAAAATATCATATTTCAATGATTAGTAGTCCTTAAATAACAGTTACTAATCATTCTCTTTTCTACTTATCTTTATATAAAGGAATATTATGTCCGCTTTTAAAAAGTCACTTCTTGTTGCTGGCGTAGCAATGATTCTTTCCAATAACGTGTTTGCTGATGAAGGTCACGGTATTGTTAAATTTAAAGGTGAAGTTATCT  >  NC_000913/3185254‑3185525

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A