Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A3 F28 I1 R1 120 93.5 3664254 88.3% 3235536 136.4

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 2,084,240 C→T V72I (GTT→ATT)  yeeD ← putative sulfurtransferase YeeD

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,084,2400CT100.0% 262.1 / NA 75V72I (GTT→ATT) yeeDputative sulfurtransferase YeeD
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base T (34/41);  total (34/41)

TACAACAATATGCCGATGACAAAGAGAAAGTGGCGCTGTTAAAAGCACTTTGGCAGTACGCGGAAGAGATTGTCTAATTTGAAGCCTCCGCCGCTGGTACGGCGGAGGACAATGTTGAGTCAGGCTTTTTGAACGGTGATGCTCCACGCTGCATCGCCAATCTGCTGATAATCGGTGATGGCATGTCCTTCTTCTGCCGCCCACTGTGGGATTGCTTCAGTTGCCTGGGTGCAATCAAACTCAATCACTAACTCATCGCCGCTGACCA  >  NC_000913/2084107‑2084374
                                                                                                                                     |                                                                                                                                      
tACAACAATATGCCGATGACAAAGAGAAAGTGGCGCTGTTAAAAGCACTTTGGCAGTACGCGGAAGAGATTGTCTAATTTGAAGCCTCCGCCGCTGGTACGGCGGAGGACAATGTTGAGTCAGGCTTTTTGAATGGTg                                                                                                                                    >  2:980474/1‑138 (MQ=255)
tACAACAATATGCCGATGACAAAGAGAAAGTGGCGCTGTTAAAAGCACTTTGGCAGTACGCGGAAGAGATTGTCTAATTTGAAGCCTCCGCCGCTGGTACGGCGGAGGACAATGTTGAGTCAGGCTTTTTGAATGGTg                                                                                                                                    >  2:660170/1‑138 (MQ=255)
 acaacaATATGCCGATGACAAAGAGAAAGTGGCGCTGTTAAAAGCACTTTGGCAGTACGCGGAAGAGATTGTCTAATTTGAAGCCTCCGCCGCTGGTACGGCGGAGGACAATGTTGAGTCAGGCTTTTTGAATGGTGa                                                                                                                                   <  1:1448769/138‑1 (MQ=255)
  caacaaTATGCCGATGACAAAGAGAAAGTGGCGCTGTTAAAAGCACTTTGGCAGTACGCGGAAGAGATTGTCTAATTTGAAGCCTCCGCCGCTGGTACGGCGGAGGACAATGTTGAGTCAGGCTTTTTGAATGGTGAt                                                                                                                                  >  1:203402/1‑138 (MQ=255)
   aacaaTATGCCGATGACAAAGAGAAAGTGGCGCTGTTAAAAGCACTTTGGCAGTACGCGGAAGAGATTGTCTAATTTGAAGCCTCCGCCGCTGGTACGGCGGAGGACAATGTTGAGTCAGGCTTTTTGAATGGTGATg                                                                                                                                 <  2:559493/138‑1 (MQ=255)
      aaTATGCCGATGACAAAGAGAAAGTGGCGCTGTTAAAAGCACTTTGGCAGTACGCGGAAGAGATTGTCTAATTTGAAGCCTCCGCCGCTGGTACGGCGGAGGACAATGTTGAGTCAGGCTTTTTGAATGGTGATGCTc                                                                                                                              <  1:1734795/138‑1 (MQ=255)
       atatGCCGATGACAAAGAGAAAGTGGCGCTGTTAAAAGCACTTTGGCAGTACGCGGAAGAGATTGTCTAATTTGAAGCCTCCGCCGCTGGTACGGCGGAGGACAATGTTGAGTCAGGCTTTTTGAATGGTGATGCTcc                                                                                                                             >  2:1594094/1‑138 (MQ=255)
        tatGCCGATGACAAAGAGAAAGTGGCGCTGTTAATAGCACTTTGGCAGTACGCGGAAGAGATTGTCTAATTTGAAGCCTCCGCCGCTGGTACGGCGGAGGACAATGTTGAGTCAGGCTTTTTGAATGGTGATGCTCCa                                                                                                                            <  1:1030659/138‑1 (MQ=255)
        tatGCCGATGACAAAGAGAAAGTGGCGCTGTTAAAAGCACTTTGGCAGTACGCGGAAGAGATTGTCTAATTTGAAGCCTCCGCCGCTGGTACGGCGGAGGACAATGTTGAGTCAGGCTTTTTGAATGGTGATGCTCCa                                                                                                                            <  1:102860/138‑1 (MQ=255)
         atGCCGATGACAAAGAGAAAGTGGCGCTGTTAAAAGCACTTTGGCAGTACGCGGAAGAGATTGTCTAATTTGAAGCCTCCGCCGCTGGTACGGCGGAGGACAATGTTGAGTCAGGCTTTTTGAATGGTGATGCTCCAc                                                                                                                           >  2:618219/1‑138 (MQ=255)
          tGCCGATGACAAAGAGAAAGTGGCGCTGTTAAAAGCACTTTGGCAGTACGCGGAAGAGATTGTCTAATTTGAAGCCTCCGCCGCTGGTACGGCGGAGGACAATGTTGAGTCAGGCTTTTTGAATGGTGATGCTCCACg                                                                                                                          >  2:213660/1‑138 (MQ=255)
          tGCCGATGACAAAGAGAAAGTGGCGCTGTTAAAAGCACTTTGGCAGTACGCGGAAGAGATTGTCTAATTTGAAGCCTCCGCCGCTGGTACGGCGGAGGACAATGTTGAGTCAGGCTTTTTGAATGGTGATGCTCCACg                                                                                                                          >  1:560036/1‑138 (MQ=255)
           gCCGATGACAAAGAGAAAGTGGCGCTGTTAAAAGCACTTTGGCAGTACGCGGAAGAGATTGTCTAATTTGAAGCCTCCGCCGCTGGTACGGCGGAGGACAATGTTGAGTCAGGCTTTTTGAATGGTGATGCTCCACGc                                                                                                                         >  2:300341/1‑138 (MQ=255)
           gCCGATGACAAAGAGAAAGTGGCGCTGTTAAAAGCACTTTGGCAGTACGCGGAAGAGATTGTCTAATTTGAAGCCTCCGCCGCTGGTACGGCGGAGGACAATGTTGAGTCAGGCTTTTTGAATGGTGATGCTCCACGc                                                                                                                         >  2:1244747/1‑138 (MQ=255)
           gCCGATGACAAAGAGAAAGTGGCGCTGTTAAAAGCACTTTGGCAGTACGCGGAAGAGATTGTCTAATTTGAAGCCTCCGCCGCTGGTACGGCGGAGGACAATGTTGAGTCAGGCTTTTTGAATGGTGATGCTCCACGc                                                                                                                         >  1:787695/1‑138 (MQ=255)
                   cAAAGAGAAAGTGGCGCTGTTAAAAGCACTTTGGCAGTACGCGGAAGAGATTGTCTAATTTGAAGCCTCCGCCGCTGGTACGGCGGAGGACAATGTTGAGTCAGGCTTTTTGAATGGTGATGCTCCACGCTGCATCGc                                                                                                                 <  1:300341/138‑1 (MQ=255)
                    aaaGAGAAAGTGGCGCTGTTAAAAGCACTTTGGCAGTACGCGGAAGAGATTGTCTAATTTGAAGCCTCCGCCGCTGGTACGGCGGAGGACAATGTTGAGTCAGGCTTTTTGAATGGTGATg                                                                                                                                 >  1:916612/1‑121 (MQ=255)
                    aaaGAGAAAGTGGCGCTGTTAAAAGCACTTTGGCAGTACGCGGAAGAGATTGTCTAATTTGAAGCCTCCGCCGCTGGTACGGCGGAGGACAATGTTGAGTCAGGCTTTTTGAATGGTGATg                                                                                                                                 <  2:916612/121‑1 (MQ=255)
                    aaaGAGAAAGTGGCGCTGTTAAAAGCACTTTGGCAGTACGCGGAAGAGATTGTCTAATTTGAAGCCTCCGCCGCTGGTACGGCGGAGGACAATGTTGAGTCAGGCTTTTTGAATGGTGATGCTCCACGCTGCATCGcc                                                                                                                >  2:814037/1‑138 (MQ=255)
                     aaGAGAAAGTGGCGCTGTTAAAAGCACTTTGGCAGTACGCGGAAGAGATTGTCTAATTTGAAGCCTCCGCCGCTGGTACGGCGGAGGACAATGTTGAGTCAGGCTTTTTGAATGGTGATGCTCCACGCTGCATCGCCa                                                                                                               <  2:784754/138‑1 (MQ=255)
                     aaGAGAAAGTGGCGCTGTTAAAAGCACTTTGGCAGTACGCGGAAGAGATTGTCTAATTTGAAGCCTCCGCCGCTGGTACGGCGGAGGACAATGTTGAGTCAGGCTTTTTGAATGGTGATGCTCCACGCTGCATCGCCa                                                                                                               <  1:838406/138‑1 (MQ=255)
                     aaGAGAAAGTGGCGCTGTTAAAAGCACTTTGGCAGTACGCGGAAGAGATTGTCTAATTTGAAGCCTCCGCCGCTGGTACGGCGGAGGACAATGTTGAGTCAGGCTTTTTGAATGGTGATGCTCCACGCTGCATCGCCa                                                                                                               <  1:213660/138‑1 (MQ=255)
                     aaGAGAAAGTGGCGCTGTTAAAAGCACTTTGGCAGTACGCGGAAGAGATTGTCTAATTTGAAGCCTCCGCCGCTGGTACGGCGGAGGACAATGTTGAGTCAGGCTTTTTGAATGGTGATGCTCCACGCTGCATCGCCa                                                                                                               <  1:465369/138‑1 (MQ=255)
                              tGGCGCTGTTAAAAGCACTTTGGCAGTACGCGGAAGAGATTGTCTAATTTGAAGCCTCCGCCGCTGGTACGGCGGAGGACAATGTTGAGTCAGGCTTTTTGAATGGTGATGCTCCACGCTGCATCGCCAATCTGCTGa                                                                                                      >  2:1720897/1‑138 (MQ=255)
                              tGGCGCTGTTAAAAGCACTTTGGCAGTACGCGGAAGAGATTGTCTAATTTGAAGCCTCCGCCGCTGGTACGGCGGAGGACAATGTTGAGTCAGGCTTTTTGAATGGTGATGCTCCACGCTGCATCGCCAATCTGCTGa                                                                                                      >  1:1046210/1‑138 (MQ=255)
                                gcgcTGTTAAAAGCACTTTGGCAGTACGCGGAAGAGATTGTCTAATTTGAAGCCTCCGCCGCTGGTACGGCGGAGGACAATGTTGAGTCAGGCTTTTTGAATGGTGATGCTCCACGCTGCATCGCCAATCTGCTGATa                                                                                                    <  1:364291/138‑1 (MQ=255)
                                gcgcTGTTAAAAGCACTTTGGCAGTACGCGGAAGAGATTGTCTAATTTGAAGCCTCCGCCGCTGGTACGGCGGAGGACAATGTTGAGTCAGGCTTTTTGAATGGTGATGCTCCACGCTGCATCGCCAATCTGCTGATa                                                                                                    <  2:220131/138‑1 (MQ=255)
                                   cTGTTAAAAGCACTTTGGCAGTACGCGGAAGAGATTGTCTAATTTGAAGCCTCCGCCGCTGGTACGGCGGAGGACAATGTTGAGTCAGGCTTTTTGAATGGTGATGCTCCACGCTGCATCGCCAATCTGCTGATAATc                                                                                                 >  2:797588/1‑138 (MQ=255)
                                   cTGTTAAAAGCACTTTGGCAGTACGCGGAAGAGATTGTCTAATTTGAAGCCTCCGCCGCTGGTACGGCGGAGGACAATGTTGAGTCAGGCTTTTTGAATGGTGATGCTCCACGCTGCATCGCCAATCTGCTGATAATc                                                                                                 >  2:1341750/1‑138 (MQ=255)
                                     gTTAAAAGCACTTTGGCAGTACGCGGAAGAGATTGTCTAATTTGAAGCCTCCGCCGCTGGTACGGCGGAGGACAATGTTGAGTCAGGCTTTTTGAATGGTGATGCTCCACGCTGCATCGCCAATCTGCTGATAATCgg                                                                                               <  1:395902/138‑1 (MQ=255)
                                       tAAAAGCACTTTGGCAGTACGCGGAAGAGATTGTCTAATTTGAAGCCTCCGCCGCTGGTACGGCGGAGGACAATGTTGAGTCAGGCTTTTTGAATGGTGATGCTCCACGCTGCATCGCCAATCTGCTGATAATCGGTg                                                                                             <  1:814037/138‑1 (MQ=255)
                                        aaaaGCACTTTGGCAGTACGCGGAAGAGATTGTCTAATTTGAAGCCTCCGCCGCTGGTACGGCGGAGGACAATGTTGAGTCAGGCTTTTTGAATGGTGATGCTCCACGCTGCATCGCCAATCTGCTGATAATCGGTgt                                                                                            >  2:759021/1‑137 (MQ=255)
                                                  tGGCAGTACGCGGAAGAGATTGTCTAATTTGAAGCCTCCGCCGCTGGTACGGCGGAGGACAATGTTGAGTCAGGCTTTTTGAATGGTGATGCTCCACGCTGCATCGCCAATCTGCTGATAATCGGTGATGGCATGTcc                                                                                  >  2:368600/1‑138 (MQ=255)
                                                  tGGCAGTACGCGGAAGAGATTGTCTAATTTGAAGCCTCCGCCGCTGGTACGGCGGAGGACAATGTTGAGTCAGGCTTTTTGAATGGTGATGCTCCACGCTGCATCGCCAATCTGCTGATAATCGGTGATGGCATGTcc                                                                                  >  1:200892/1‑138 (MQ=255)
                                                  tGGCAGTACGCGGAAGAGATTGTCTAATTTGAAGCCTCCGCCGCTGGTACGGCGGAGGACAATGTTGAGTCAGGCTTTTTGAATGGTGATGCTCCACGCTGCATCGCCAATCTGCTGATAATCGGTGATGGCATGTcc                                                                                  >  2:160956/1‑138 (MQ=255)
                                                  tGGCAGTACGCGGAAGAGATTGTCTAATTTGAAGCCTCCGCCGCTGGTACGGCGGAGGACAATGTTGAGTCAGGCTTTTTGAATGGTGATGCTCCACGCTGCATCGCCAATCTGCTGATAATCGGTGATGGCATGTcc                                                                                  >  1:143984/1‑138 (MQ=255)
                                                       gTACGCGGAAGAGATTGTCTAATTTGAAGCCTCCGCCGCTGGTACGGCGGAGGACAATGTTGAGTCAGGCTTTTTGAATGGTGATGCTCCACGCTGCATCGCCAATCTGCTGATAATCGGTGATGGCATGTCcttctt                                                                             <  1:980474/138‑1 (MQ=255)
                                                             ggAAGAGATTGTCTAATTTGAAGCCTCCGCCGCTGGTACGGCGGAGGACAATGTTGAGTCAGGCTTTTTGAATGGTGATGCTCCACGCTGCATCGCCAATCTGCTGATAATCGGTGATGGCATGTCCTTCTTCTgccg                                                                       <  1:1679792/138‑1 (MQ=255)
                                                             ggAAGAGATTGTCTAATTTGAAGCCTCCGCCGCTGGTACGGCGGAGGACAATGTTGAGTCAGGCTTTTTGAATGGTGATGCTCCACGCTGCATCGCCAATCTGCTGATAATCGGTGATGGCATGTCCTTCTTCTgccg                                                                       <  2:203402/138‑1 (MQ=255)
                                                             ggAAGAGATTGTCTAATTTGAAGCCTCCGCCGCTGGTACGGCGGAGGACAATGTTGAGTCAGGCTTTTTGAATGGTGATGCTCCACGCTGCATCGCCAATCTGCTGATAATCGGTGATGGCATGTCCTTCTTCTgccg                                                                       <  2:560036/138‑1 (MQ=255)
                                                             ggAAGAGATTGTCTAATTTGAAGCCTCCGCCGCTGGTACGGCGGAGGACAATGTTGAGTCAGGCTTTTTGAATGGTGATGCTCCACGCTGCATCGCCAATCTGCTGATAATCGGTGATGGCATGTCCTTCTTCTgccg                                                                       <  1:160956/138‑1 (MQ=255)
                                                             ggAAGAGATTGTCTAATTTGAAGCCTCCGCCGCTGGTACGGCGGAGGACAATGTTGAGTCAGGCTTTTTGAATGGTGATGCTCCACGCTGCATCGCCAATCTGCTGATAATCGGTGATGGCATGTCCTTCTTCTgccg                                                                       <  1:276139/138‑1 (MQ=255)
                                                             ggAAGAGATTGTCTAATTTGAAGCCTCCGCCGCTGGTACGGCGGAGGACAATGTTGAGTCAGGCTTTTTGAATGGTGATGCTCCACGCTGCAACGCCAATCTGCTGATAATCGGTGATGGCATGTCCTTCTTCTgccg                                                                       <  1:684549/138‑1 (MQ=255)
                                                                agagATTGTCTAATTTGAAGCCTCCGCCGCTGGTACGGCGGAGGACAATGTTGAGTCAGGCTTTTTGAATGGTGATGCTCCACGCTGCATCGCCAATCTGCTGATAATCGGTGATGGCATGTCCTTCTTCTGCCGccc                                                                    <  2:1626240/138‑1 (MQ=255)
                                                                 gagaTTGTCTAATTTGAAGCCTCCGCCGCTGGTACGGCGGAGGACAATGTTGAGTCAGGCTTTTTGAATGGTGATGCTCCACGCTGCATCGCCAATCTGCTGATAATCGGTGATGGCATGTCCTTCTTCTGCCGCCCa                                                                   <  1:797588/138‑1 (MQ=255)
                                                                    aTTGTCTAATTTGAAGCCTCCGCCGCTGGTACGGCGGAGGACAATGTTGAGTCAGGCTTTTTGAATGGTGATGCTCCACGCTGCATCGCCAATCTGCTGATAATCGGTGATGGCATGTCCTTCTTCTGCCGCCCACtg                                                                >  2:759275/1‑138 (MQ=255)
                                                                    aTTGTCTAATTTGAAGCCTCCGCCGCTGGTACGGCGGAGGACAATGTTGAGTCAGGCTTTTTGAATGGTGATGCTCCACGCTGCATCGCCAATCTGCTGATAATCGGTGATGGCATGTCCTTCTTCTGCCGCCCACtg                                                                >  2:447124/1‑138 (MQ=255)
                                                                      tGTCTAATTTGAAGCCTCCGCCGCTGGTCCGGCGGAGGACAATGTTGGGGCAGGCATTTTGAACCGAGATGCTCCACGCCGCATCGCCAACCTGCTGATAAACGGTGATGGCATGTCCCTCTCCCGCCGCCCACtgtg                                                              >  2:695912/1‑138 (MQ=255)
                                                                      tGTCTAATTTGAAGCCTCCGCCGCTGGTACGGCGGAGGACAATGTTGAGTCAGGCTTTTTGAATGGTGATGCTCCACGCTGCATCGCCAATCTGCTGATAATCGGTGATGGCATGTCCTTCTTCTGCCGCCCACtgtg                                                              <  1:447124/138‑1 (MQ=255)
                                                                      tGTCTAATTTGAAGCCTCCGCCGCTGGTACGGCGGAGGACAATGTTGAGTCAGGCTTTTTGAATGGTGATGCTCCACGCTGCATCGCCAATCTGCTGATAATCGGTGATGGCATGTCCTTCTTCTGCCGCCCACtgtg                                                              <  1:1594094/138‑1 (MQ=255)
                                                                      tGTCTAATTTGAAGCCTCCGCCGCTGGTACGGCGGAGGACAATGTTGAGTCAGGCTTTTTGAATGGTGATGCTCCACGCTGCATCGCCAATCTGCTGATAATCGGTGATGGCATGTCCTTCTTCTGCCGCCCACtgtg                                                              <  2:787695/138‑1 (MQ=255)
                                                                      tGTCTAATTTGAAGCCTCCGCCGCTGGTACGGCGGAGGACAATGTTGAGTCAGGCTTTTTGAATGGTGATGCTCCACGCTGCATCGCCAATCTGCTGATAATCGGTGATGGCATGTCCTTCTTCTGCCGCCCACtgtg                                                              >  1:259678/1‑138 (MQ=255)
                                                                       gTCTAATTTGAAGCCTCCGCCGCTGGTACGGCGGAGGACAATGTTGAGTCAGGCTTTTTGAATGGTGATGCTCCACGCTGCATCGCCAATCTGCTGATAATCGGTGATGGCATGTCCTTCTTCTGCCGCCCACTGTgg                                                             <  2:1324630/138‑1 (MQ=255)
                                                                        tCTAATTTGAAGCCTCCGCCGCTGGTACGGCGGAGGACAATGTTGAGTCAGGCTTTTTGAATGGTGATGCTCCACGCTGCATCGCCAATCTGCTGTTAATCGGTGATGGCATGTCCTTCTTCTGCCGCCCACTGTggg                                                            <  2:832055/138‑1 (MQ=255)
                                                                        tCTAATTTGAAGCCTCCGCCGCTGGTACGGCGGAGGACAATGTTGAGTCAGGCTTTTTGAATGGTGATGCTCCACGCTGCATCGCCAATCTGCTGATAATCGGTGATGGCATGTCCTTCTTCTGCCGCCCACTGTggg                                                            <  1:618219/138‑1 (MQ=255)
                                                                           aaTTTGAAGCCTCCGCCGCTGGTACGGCGGAGGACAATGTTGAGTCAGGCTTTTTGAATGGTGATGCTCCACGCTGCATCGCCAATCTGCTGATAATCGGTGATGGCATGTCCTTCTTCTg                                                                          <  2:1580983/121‑1 (MQ=255)
                                                                           aaTTTGAAGCCTCCGCCGCTGGTACGGCGGAGGACAATGTTGAGTCAGGCTTTTTGAATGGTGATGCTCCACGCTGCATCGCCAATCTGCTGATAATCGGTGATGGCATGTCCTTCTTCTg                                                                          >  1:1580983/1‑121 (MQ=255)
                                                                                gAAGCCTCCGCCGCTGGTACGGCGGAGGACAATGTTGAGTCAGGCTTTTTGAATGGTGATGCTCCACGCTGCATCGCCAATCTGCTGATAATCGGTGATGGCATGTCCTTCTTCTGCCGCCCACTGTGGGATTGCTTc                                                    <  1:241152/138‑1 (MQ=255)
                                                                                 aaGCCTCCGCCGCTGGTACGGCGGAGGACAATGTTGAGTCAGGCTTTTTGAATGGTGATGCTCCACGCTGCATCGCCAATCTGCTGATAATCGGTGATGGCATGTCCTTCTTCTGCCGCCCACTGTGGGATTGCTTCa                                                   >  2:1646408/1‑138 (MQ=255)
                                                                                    ccTCCGCCGCTGGTACGGCGGAGGACAATGTTGAGTCAGGCTTTTTGAATGGTGATGCTCCACGCTGCATCGCCAATCTGCTGATAATCGGTGATGGCATGTCCTTCTTCTGCCGCCCACTGTGGGATTGCTTCAGtt                                                <  2:760072/138‑1 (MQ=255)
                                                                                          ccgcTGGTACGGCGGAGGACAATGTTGAGTCAGGCTTTTTGAATGGTGATGCTCCACGCTGCATCGCCAATCTGCTGATAATCGGTGATGGCATGTCCTTCTTCTGCCGCCCACTGTGGGATTGCTTCAGTTGCCTgg                                          >  2:792527/1‑138 (MQ=255)
                                                                                           cgcTGGTACGGCGGAGGACAATGTTGAGTCAGGCTTTTTGAATGGTGATGCTCCACGCTGCATCGCCAATCTGCTGATAATCGGTGATGGCATGTCCTTCTTCTGCCGCCCACTGTGGGATTGCTTCAGTTGCCTggg                                         <  1:792527/138‑1 (MQ=255)
                                                                                           cgcTGGTACGGCGGAGGACAATGTTGAGTCAGGCTTTTTGAATGGTGATGCTCCACGCTGCATCGCCAATCTGCTGATAATCGGTGATGGCATGTCCTTCTTCTGCCGCCCACTGTGGGATTGCTTCAGTTGCCTggg                                         <  2:1057134/138‑1 (MQ=255)
                                                                                            gcTGGTACGGCGGAGGACAATGTTGAGTCAGGCTTTTTGAATGGTGATGCTCCACGCTGCATCGCCAATCTGCTGATAATCGGTGATGGCATGTCCTTCTTCTGCCGCCCACTGTGGGATTGCTTCAGTTGCCTGGGt                                        <  1:1244747/138‑1 (MQ=255)
                                                                                                gTACGGCGGAGGACAATGTTGAGTCAGGCTTTTTGAATGGTGATGCTCCACGCTGCATCGCCAATCTGCTGATAATCGGTGATGGCATGTCCTTCTTCTGCCGCCCACTGTGGGATTGCTTc                                                    <  2:231525/122‑1 (MQ=255)
                                                                                                gTACGGCGGAGGACAATGTTGAGTCAGGCTTTTTGAATGGTGATGCTCCACGCTGCATCGCCAATCTGCTGATAATCGGTGATGGCATGTCCTTCTTCTGCCGCCCACTGTGGGATTGCTTc                                                    >  1:231525/1‑122 (MQ=255)
                                                                                                       ggaggaCAATGTTGAGTCAGGCTTTTTGAATGGTGATGCTCCACGCTGCATCGCCAATCTGCTGATAATCGGTGATGGCATGTCCTTCTTCTGCCGCCCACTGTGGGATTGCTTCAGTTGCCTGGGTGCAATCAAACt                             <  2:1259941/138‑1 (MQ=255)
                                                                                                                       tCAGGCTTTTTGAATGGTGATGCTCCACGCTGCATCGCCAATCTGCTGATAATCGGTGATGGCATGTCCTTCTTCTGCCGCCCACTGTGGGATTGCTTCAGTTGCCTGGGTGCAATCaaa                               >  1:1666788/1‑120 (MQ=255)
                                                                                                                       tCAGGCTTTTTGAATGGTGATGCTCCACGCTGCATCGCCAATCTGCTGATAATCGGTGATGGCATGTCCTTCTTCTGCCGCCCACTGTGGGATTGCTTCAGTTGCCTGGGTGCAATCaaa                               <  2:1666788/120‑1 (MQ=255)
                                                                                                                       tCAGGCTTTTTGAATGGTGATGCTCCACGCTGCATCGCCAATCTGCTGATAATCGGTGATGGCATGTCCTTCTTCTGCCGCCCACTGTGGGATTGCTTCAGTTGCCTGGGTGCAATCAAACTCAATCACTAACTCATc             >  2:10590/1‑138 (MQ=255)
                                                                                                                       tCAGGCTTTTTGAATGGTGATGCTCCACGCTGCATCGCCAATCTGCTGATAATCGGTGATGGCATGTCCTTCTTCTGCCGCCCACTGTGGGATTGCTTCAGTTGCCTGGGTGCAATCAAACTCAATCACTAACTCATc             >  2:1215938/1‑138 (MQ=255)
                                                                                                                       tCAGGCTTTTTGAATGGTGATGCTCCACGCTGCATCGCCAATCTGCTGATAATCGGTGATGGCATGTCCTTCTTCTGCCGCCCACTGTGGGATTGCTTCAGTTGCCTGGGTGCAATCAAACTCAATCACTAACTCATc             >  2:400459/1‑138 (MQ=255)
                                                                                                                            cTTTTTGAATGGTGATGCTCCACGCTGCATCGCCAATCTGCTGATAATCGGTGATGGCATGTCCTTCTTCTGCCGCCCACTGTGGGATTGCTTCAGTTGCCTGGGTGCAATCAAACTCAATCACTAACTCATcgccgc        >  2:332232/1‑138 (MQ=255)
                                                                                                                             tttttGAATGGTGATGCTCCACGCTGCATCGCCAATCTGCTGATAATCGGTGATGGCATGTCCTTCTTCTGCCGCCCACTGTGGGATTGCTTCAGTTGCCTGGGTGCAATCAAACTCAATCACTAACTCATCGCCGCt       <  2:143984/138‑1 (MQ=255)
                                                                                                                             tttttGAATGGTGATGCTCCACGCTGCATCGCCAATCTGCTGATAATCGGTGATGGCATGTCCTTCTTCTGCCGCCCACTGTGGGATTGCTTCAGTTGCCTGGGTGCAATCAAACTCAATCACTAACTCATCGCCGCt       >  2:1740390/1‑138 (MQ=255)
                                                                                                                                  gAATGGTGATGCTCCACGCTGCATCGCCAATCTGCTGATAATCGGTGATGGCATGTCCTTCTTCTGCCGCCCACTGTGGGATTGCTTCAGTTGCCTGGGTGCAATCAAACTCAATCACTAACTCATCGCCGCTGACCa  <  2:200892/138‑1 (MQ=255)
                                                                                                                                     |                                                                                                                                      
TACAACAATATGCCGATGACAAAGAGAAAGTGGCGCTGTTAAAAGCACTTTGGCAGTACGCGGAAGAGATTGTCTAATTTGAAGCCTCCGCCGCTGGTACGGCGGAGGACAATGTTGAGTCAGGCTTTTTGAACGGTGATGCTCCACGCTGCATCGCCAATCTGCTGATAATCGGTGATGGCATGTCCTTCTTCTGCCGCCCACTGTGGGATTGCTTCAGTTGCCTGGGTGCAATCAAACTCAATCACTAACTCATCGCCGCTGACCA  >  NC_000913/2084107‑2084374

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A