Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A3 F28 I1 R1 120 93.5 3664254 88.3% 3235536 136.4

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 2,644,687 A→G F60L (TTT→CTT)  ndk ← nucleoside diphosphate kinase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,644,6870AG100.0% 239.0 / NA 64F60L (TTT→CTT) ndknucleoside diphosphate kinase
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base G (38/26);  total (38/26)

GCGCAGAGTACCAGCCAGTGCGTTTGCCGGATTGGTCGCGCCCAGCAGATCGCGGTGACGCTGAACGGCGTTTTCACCTTCCAGCACGGAAACCACGATCGGGCCAGAGGTCATGAATTCAACCAGACCATCAAAGAACGGTTTTCCATCGTGTTCAGCATAAAAGCCACGTGCCTGTTCAACGGTCAGGTGCAGCATTTTGGTGCCAACAATTTTGAACCCTGCAGCTTCAAAGCGCGCAAAGATATTACCAATGACGTTTTTTGC  >  NC_000913/2644553‑2644819
                                                                                                                                      |                                                                                                                                    
gcgcAGAGTACCAGCCAGTGCGTTTGCCGGATTGGTCGCGCCCAGCAGATCGCGGTGACGCTGAACGGCGTTTTCACCTTCCAGCACGGAAACCACGATCGGGCCAGAGGTCATGAATTCAACCAGACCATCAAGGaa                                                                                                                                   <  2:1535213/138‑1 (MQ=255)
 cgcAGAGTACCAGCCAGTGCGTTTGCCGGATTGGTCGCGCCCAGCAGATCGCGGTGACGCTGAACGGCGTTTTCACCTTCCAGCACGGAAACCACGATCGGGCCAGAGGTCATGAATTCAACCAGACCATCAAGGAAc                                                                                                                                  >  1:331605/1‑138 (MQ=255)
   cAGAGTACCAGCCAGTGCGTTTGCCGGATTGGTCGCGCCCAGCAGATCGCGGTGACGCGGAACGGCGTTTTCACCTTCCAGCCCGGCAACCACGATCGACCCAGAGGTCATGAATTCAACCAGCCCATCAAAGAACgg                                                                                                                                >  2:128279/1‑138 (MQ=255)
        tACCAGCCAGTGCGTTTGCCGGATTGGTCGCGCCCAGCAGATCGCGGTGACGCTGAACGGCGTTTTCACCTTCCAGCACGGAAACCACGATCGGGCCAGAGGTCATGAATTCAACCAGACCATCAAGGAACGGTTTTc                                                                                                                           <  2:41757/138‑1 (MQ=255)
          ccagccagTGCGTTTGCCGGATTGGTCGCGCCCAGCAGATCGCGGTGACGCTGAACGGCGTTTTCACCTTCCAGCACGGAAACCACGATCGGGCCAGAGGTCATGAATTCAACCAGACCATCAAGGAACGGTTTTCCa                                                                                                                         <  1:649428/138‑1 (MQ=255)
           cagccagTGCGTTTGCCGGATTGGTCGCGCCCAGCAGATCGCGGTGACGCTGAACGGCGTTTTCACCTTCCAGCACGGAAACCACGATCGGGCCAGAGGTCATGAATTCAACCAGACCATCAAGGAACGGTTTTCCAt                                                                                                                        >  2:1657367/1‑138 (MQ=255)
                  tGCGTTTGCCGGATTGGTCGCGCCCAGCAGATCGCGGTGACGCTGAACGGCGTTTTCACCTTCCAGCACGGAAACCACGATCGGGCCAGAGGTCATGAATTCAACCAGACCATCAAGGAACGGtt                                                                                                                              <  1:1458133/125‑1 (MQ=255)
                  tGCGTTTGCCGGATTGGTCGCGCCCAGCAGATCGCGGTGACGCTGAACGGCGTTTTCACCTTCCAGCACGGAAACCACGATCGGGCCAGAGGTCATGAATTCAACCAGACCATCAAGGAACGGtt                                                                                                                              >  2:1458133/1‑125 (MQ=255)
                  tGCGTTTGCCGGATTGGTCGCGCCCAGCAGATCGCGGTGACGCTGAACGGCGTTTTCACCTTCCAGCACGGAAACCACGATCGGGCCAGAGGTCATGAATTCAACCAGACCATCAAGGAACGGTTTTc                                                                                                                           >  2:822926/1‑128 (MQ=255)
                  tGCGTTTGCCGGATTGGTCGCGCCCAGCAGATCGCGGTGACGCTGAACGGCGTTTTCACCTTCCAGCACGGAAACCACGATCGGGCCAGAGGTCATGAATTCAACCAGACCATCAAGGAACGGTTTTc                                                                                                                           <  1:822926/128‑1 (MQ=255)
                  tGCGTTTGCCGGATTGGTCGCGCCCAGCAGATCGCGGTGACGCTGAACGGCGTTTTCACCTTCCAGCACGGAAACCACGATCGGGCCAGAGGTCATGAATTCAACCAGACCATCAAGGAACGGTTTTCCATCGTGTTc                                                                                                                 >  2:1822586/1‑138 (MQ=255)
                    cGTTTGCCGGATTGGTCGCGCCCAGCAGATCGCGGTGACGCTGAACGGCGTTTTCACCTTCCAGCACGGAAACCACGATCGGGCCAGAGGTCATGAATTCAACCAGACCATCAAGGAACGGTTTTCCa                                                                                                                         >  1:966175/1‑128 (MQ=255)
                    cGTTTGCCGGATTGGTCGCGCCCAGCAGATCGCGGTGACGCTGAACGGCGTTTTCACCTTCCAGCACGGAAACCACGATCGGGCCAGAGGTCATGAATTCAACCAGACCATCAAGGAACGGTTTTCCa                                                                                                                         <  2:966175/128‑1 (MQ=255)
                    cGTTTGCCGGATTGGTCGCGCCCAGCAGATCGCGGTGACGCTGAACGGCGTTTTCACCTTCCAGCACGGAAACCACGATCGGGCCAGAGGTCATGAATTCAACCAGACCATCAAGGAACGGTTTTCCATCGTGTTCAg                                                                                                               <  2:591567/138‑1 (MQ=255)
                    cGTTTGCCGGATTGGTCGCGCCCAGCAGATCGCGGTGACGCTGAACGGCGTTTTCACCTTCCAGCACGGAAACCACGATCGGGCCAGAGGTCATGAATTCAACCAGACCATCAAGGAACGGTTTTCCATCGTGTTCAg                                                                                                               >  2:263931/1‑138 (MQ=255)
                    cGTTTGCCGGATTGGTCGCGCCCAGCAGATCGCGGTGACGCTGAACGGCGTTTTCACCTTCCAGCACGGAAACCACGATCGGGCCAGAGGTCATGAATTCAACCAGACCATCAAGGAACGGTTTTCCATCGTGTTCAg                                                                                                               >  1:884353/1‑138 (MQ=255)
                    cGTTTGCCGGATTGGTCGCGCCCAGCAGATCGCGGTGACGCTGAACGGCGTTTTCACCTTCCAGCACGGAAACCACGATCGGGCCAGAGGTCATGAATTCAACCAGACCATCAAGGAACGGTTTTCCATCGTGTTCAg                                                                                                               >  1:591567/1‑138 (MQ=255)
                        tGCCGGATTGGTCGCGCCCAGCAGATCGCGGTGACGCTGAACGGCGTTTTCACCTTCCAGCACGGAAACCACGATCGGGCCAGAGGTCATGAATTCAACCAGACCATCAAGGAACGGTTTTCCATCGTGTTCAGCATa                                                                                                           <  1:1822586/138‑1 (MQ=255)
                        tGCCGGATTGGTCGCGCCCAGCAGATCGCGGTGACGCTGAACGGCGTTTTCACCTTCCAGCACGGAAACCACGATCGGGCCAGAGGTCATGAATTCAACCAGACCATCAAGGAACGGTTTTCCATCGTGTTCAGCATa                                                                                                           <  1:1145342/138‑1 (MQ=255)
                         gCCGGATTGGTCGCGCCCAGCAGATCGCGGTGACGCTGAACGGCGTTTTCACCTTCCAGCACGGAAACCACGATCGGGCCAGAGGTCATGAATTCAACCAGACCATCAAGGAACGGTTTTCCATCGTGTTCAGCATaa                                                                                                          >  2:902564/1‑138 (MQ=255)
                          ccGGATTGGTCGCGCCCAGCAGATCGCGGTGACGCTGAACGGCGTTTTCACCTTCCAGCACGGAAACCACGATCGGGCCAGAGGTCATGAATTCAACCAGACCATCAAGGAACGGTTTTCCATCGTGTTCAGCATaaa                                                                                                         >  1:118573/1‑138 (MQ=255)
                          ccGGATTGGTCGCGCCCAGCAGATCGCGGTGACGCTGAACGGCGTTTTCACCTTCCAGCACGGAAACCACGATCGGGCCAGAGGTCATGAATTCAACCAGACCATCAAGGAACGGTTTTCCATCGTGTTCAGCATaaa                                                                                                         >  1:1679008/1‑138 (MQ=255)
                               ttGGTCGCGCCCAGCAGATCGCGGTGACGCTGAACGGCGTTTTCACCTTCCAGCACGGAAACCACGATCGGGCCAGAGGTCATGAATTCAACCAGACCATCAAGGAACGGTTTTCCATCGTGTTCAGCATAAAAGCCa                                                                                                    <  1:1349501/138‑1 (MQ=255)
                                tGGTCGCGCCCAGCAGATCGCGGTGACGCTGAACGGCGTTTTCACCTTCCAGCACGGAAACCACGATCGGGCCAGAGGTCATGAATTCAACCAGACCATCAAGGAACGGTTTTCCATCGTGTTCAGCATAAAAGCCAc                                                                                                   <  1:1662271/138‑1 (MQ=255)
                                 ggTCGCGCCCAGCAGATCGCGGTGACGCTGAACGGCGTTTTCACCTTCCAGCACGGAAACCACGATCGGGCCAGAGGTCATGAATTCAACCAGACCATCAAGGAACGGTTTTCCATCGTGTTCAGCATAAAAGCCACg                                                                                                  >  1:1409842/1‑138 (MQ=255)
                                       gcCCAGCAGATCGCGGTGACGCTGAACGGCGTTTTCACCTTCCAGCACGGAAACCACGATCGGGCCAGAGGTCATGAATTCAACCAGACCATCAAGGAACGGTTTTCCATCGTGTTCAGCATAAAAGCCACGTGCCTg                                                                                            <  2:331605/138‑1 (MQ=255)
                                          cagcagATCGCGGTGACGCTGAACGGCGTTTTCACCTTCCAGCACGGAAACCACGATCGGGCCAGAGGTCATGAATTCAACCAGACCATCAAGGAACGGTTTTCCATCGTGTTCAGCATAAAAGCCACGTGCCTGTTc                                                                                         <  2:1574105/138‑1 (MQ=255)
                                              agATCGCGGTGACGCTGAACGGCGTTTTCACCTTCCAGCACGGAAACCACGATCGGGCCAGAGGTCATGAATTCAACCAGACCATCAAGGAACGGTTTTCCATCGTGTTCAGCATAAAAGCCACGTGCCTGTTCAACg                                                                                     >  1:702847/1‑138 (MQ=255)
                                               gATCGCGGTGACGCTGAACGGCGTTTTCACCTTCCAGCACGGAAACCACGATCGGGCCAGAGGTCATGAATTCAACCAGACCATCAAGGAACGGTTTTCCATCGTGTTCAGCATAAAAGCCACGTGCCTGTTCAACgg                                                                                    <  1:1213430/138‑1 (MQ=255)
                                               gATCGCGGTGACGCTGAACGGCGTTTTCACCTTCCAGCACGGAAACCACGATCGGGCCAGAGGTCATGAATTCAACCAGACCATCAAGGAACGGTTTTCCATCGTGTTCAGCATAAAAGCCACGTGCCTGTTCAACgg                                                                                    <  1:973670/138‑1 (MQ=255)
                                                   gcgGTGACGCTGAACGGCGTTTTCACCTTCCAGCACGGAAACCACGATCGGGCCAGAGGTCATGAATTCAACCAGACCATCAAGGAACGGTTTTCCATCGTGTTCAGCATAAAAGCCACGTGCCTGTTCAACGGTCAg                                                                                <  2:884353/138‑1 (MQ=255)
                                                   gcgGTGACGCTGAACGGCGTTTTCACCTTCCAGCACGGAAACCACGATCGGGCCAGAGGTCATGAATTCAACCAGACCATCAAGGAACGGTTTTCCATCGTGTTCAGCATAAAAGCCACGTGCCTGTTCAACGGTCAg                                                                                <  2:1679008/138‑1 (MQ=255)
                                                    cgGTGACGCTGAACGGCGTTTTCACCTTCCAGCACGGAAACCACGATCGGGCCAGAGGTCATGAATTCAACCAGACCATCAAGGAACGGTTTTCCATCGTGTTCAGCATAAAAGCCACGTGCCTGTTCAACGGTCAgg                                                                               <  1:263931/138‑1 (MQ=255)
                                                     ggTGACGCTGAACGGCGTTTTCACCTTCCAGCACGGAAACCACGATCGGGCCAGAGGTCATGAATTCAACCAGACCATCAAGGAACGGTTTTCCATCGTGTTCAGCATAAAAGCCACGTGCCTGTTCAACGGTCAGGt                                                                              >  2:246804/1‑138 (MQ=255)
                                                       tGACGCTGAACGGCGTTTTCACCTTCCAGCACGGAAACCACGATCGGGCCAGAGGTCATGAATTCAACCAGACCATCAAGGAACGGTTTTCCATCGTGTTCAGCATAAAAGCCACGTGCCTGTTCAACGGTCAGGTgc                                                                            >  1:1715287/1‑138 (MQ=255)
                                                            cTGAACGGCGTTTTCACCTTCCAGCACGGAAACCACGATCGGGCCAGAGGTCATGAATTCAACCAGACCATCAAGGAACGGTTTTCCATCGTGTTCAGCATAAAAGCCACGTGCCTGTTCAACGGTCAGGTGCAGCAt                                                                       >  1:844674/1‑138 (MQ=255)
                                                                        ttCACCTTCCAGCACGGAAACCACGATCGGGCCAGAGGTCATGAATTCAACCAGACCATCAAGGAACGGTTTTCCATCGTGTTCAGCATAAAAGCCACGTGCCTGTTCAACGGTCAGGTGCAGCATTTTGGTGCcaac                                                           >  2:1629879/1‑138 (MQ=255)
                                                                                ccAGCACGGAAACCACGATCGGGCCAGAGGTCATGAATTCAACCAGACCATCAAGGAACGGTTTTCCATCGTGTTCAGCATAAAAGCCACGTGCCTGTTCAACGGTCAGGTGCAGCATTTTGGTGCCAACAATTTTGa                                                   >  1:948848/1‑138 (MQ=255)
                                                                                  aGCACGGAAACCACGATCGGGCCAGAGGTCATGAATTCAACCAGACCATCAAGGAACGGTTTTCCATCGTGTTCAGCATAAAAGCCACGTGCCTGTTCAACGGTCAGGTGCAGCATTTTGGTGCCAACAATTTTg                                                    >  2:851627/1‑135 (MQ=255)
                                                                                  aGCACGGAAACCACGATCGGGCCAGAGGTCATGAATTCAACCAGACCATCAAGGAACGGTTTTCCATCGTGTTCAGCATAAAAGCCACGTGCCTGTTCAACGGTCAGGTGCAGCATTTTGGTGCCAACAATTTTg                                                    <  1:851627/135‑1 (MQ=255)
                                                                                  aGCACGGAAACCACGATCGGGCCAGAGGTCATGAATTCAACCAGACCATCAAGGAACGGTTTTCCATCGTGTTCAGCATAAAAGCCACGTGCCTGTTCAACGGTCAGGTGCAGCATTTTGGTGCCAACAATTTTGAAc                                                 >  2:825422/1‑138 (MQ=255)
                                                                                           aCCACGATCGGGCCAGCGGACATGAATTCAACCAGACCATCAAGGAACGGCTTTCCATCGTGTTCAGCATAAAAGCCACGTGCCTGTTCAACGGTCAGGTGCAGCATTTTGGTGCCAACAATTTTGAACCCTGCAGCt                                        >  2:1468527/1‑138 (MQ=255)
                                                                                           aCCACGATCGGGCCAGAGGTCATGAATTCAACCAGACCATCAAGGAACGGTTTTCCATCGTGTTCAGCATAAAAGCCACGTGCCTGTTCAACGGTCAGGTGCAGCATTTTGGTGCCAACAATTTTGAACCCTGCAGCt                                        >  2:737193/1‑138 (MQ=255)
                                                                                             cACGATCGGGCCAGAGGTCATGAATTCAACCAGACCATCAAGGAACGGTTTTCCATCGTGTTCAGCATAAAAGCCACGTGCCTGTTCAACGGTCAGGTGCAGCATTTTGGTGCCAACAATTTTGAACCCTGCAGCTTc                                      >  2:259478/1‑138 (MQ=255)
                                                                                             cACGATCGGGCCAGAGGTCATGAATTCAACCAGACCATCAAGGAACGGTTTTCCATCGTGTTCAGCATAAAAGCCACGTGCCTGTTCAACGGTCAGGTGCAGCATTTTGGTGCCAACAATTTTGAACCCTGCAGCTTc                                      <  1:902564/138‑1 (MQ=255)
                                                                                              aCGATCGGGCCAGAGGTCATGAATTCAACCAGACCATCAAGGAACGGTTTTCCATCGTGTTCAGCATAAAAGCCACGTGCCTGTTCAACGGTCAGGTGCAGCATTTTGGTGCCAACAATTTTGAACCCTGCAGCTTCa                                     <  1:737193/138‑1 (MQ=255)
                                                                                               cGATCGGGCCAGAGGTCATGAATTCAACCAGACCATCAAGGAACGGTTTTCCATCGTGTTCAGCATAAAAGCCACGTGCCTGTTCAACGGTCAGGTGCAGCATTTTGGTGCCAACAATTTTGAACCCTGCAGCTTCaa                                    <  1:246804/138‑1 (MQ=255)
                                                                                               cGATCGGGCCAGAGGTCATGAATTCAACCAGACCATCAAGGAACGGTTTTCCATCGTGTTCAGCATAAAAGCCACGTGCCTGTTCAACGGTCAGGTGCAGCATTTTGGTGCCAACAATTTTGAACCCTGCAGCTTCaa                                    >  1:1360471/1‑138 (MQ=255)
                                                                                                   cGGGCCAGAGGTCATGAATTCAACCAGACCATCAAGGAACGGTTTTCCATCGTGTTCAGCATAAAAGCCACGTGCCTGTTCAACGGTCAGGTGCAGCATTTTGGTGCCAACAATTTTGAACCCTGCAGCTTCAAAgcg                                >  2:663311/1‑138 (MQ=255)
                                                                                                    gggCCAGAGGTCATGAATTCAACCAGACCATCAAGGAACGGTTTTCCATCGTGTTCAGCATAAAAGCCACGTGCCTGTTCAACGGTCAGGTGCAGCATTTTGGTGCCAACAATTTTGAACCCTGCAGCTTCAAAgcgc                               >  2:1756459/1‑138 (MQ=255)
                                                                                                      gCCAGAGGTCATGAATTCAACCAGACCATCAAGGAACGGTTTTCCATCGTGTTCAGCATAAAAGCCACGTGCCTGTTCAACGGTCAGGTGCAGCATTTTGGTGCCAACAATTTTGAACCCTGCAGCTTCAAAgcgcgc                             <  1:1629879/138‑1 (MQ=255)
                                                                                                      gCCAGAGGTCATGAATTCAACCAGACCATCAAGGAACGGGTTTCCAACGTGGTCAGCCAAAAAAGCACGTGCCTGTTCCACCGGCTGGGTCTACAATTTGGGGCCTACAATTTTTAACCCTGCTCTTTCCAAgcgcgc                             <  2:413856/138‑1 (MQ=255)
                                                                                                       ccAGAGGTCATGAATTCAACCAGACCATCAAGGAACGGTTTTCCATCGTGTTCAGCATAAAAGCCACGTGCCTGTTCAACGGTCAGGTGCAGCATTTTGGTGCCAACAATTTTGAACCCTGCAGCTTCAAAGCGCGCa                            >  2:144218/1‑138 (MQ=255)
                                                                                                       ccAGAGGTCATGAATTCAACCAGACCATCAAGGAACGGTTTTCCATCGTGTTCAGCATAAAAGCCACGTGCCTGTTCAACGGTCAGGTGCAGCATTTTGGTGCCAACAATTTTGAACCCTGCAGCTTCAAAGCGCGCa                            >  1:934197/1‑138 (MQ=255)
                                                                                                        cAGAGGTCATGAATTCAACCAGACCATCAAGGAACGGTTTTCCATCGTGTTCAGCATAAAAGCCACGTGCCTGTTCAACGGTCAGGTGCAGCATTTTGGTGCCAACAATTTTGAGCCCTGCAGCTTCAAAGCGCGCaa                           <  2:75365/138‑1 (MQ=255)
                                                                                                           agGTCATGAATTCAACCAGACCATCAAGGAACGGTTTTCCATCGTGTTCAGCATAAAAGCCACGTGCCTGTTCAACGGTCAGGTGCAGCATTTTGGTGCCAACAATTTTGAACCCTGCAGCTTCAAAGCGCGCAAAGa                        <  2:844674/138‑1 (MQ=255)
                                                                                                                  gAATTCAACCAGACCATCAAGGAACGGTTTTCCATCGTGTTCAGCATAAAAGCCACGTGCCTGTTCAACGGTCAGGTGCAGCATTTTGGTGCCAACAATTTTGAACCCTGCAGCTTCAAAgcgcg                              >  2:401002/1‑125 (MQ=255)
                                                                                                                  gAATTCAACCAGACCATCAAGGAACGGTTTTCCATCGTGTTCAGCATAAAAGCCACGTGCCTGTTCAACGGTCAGGTGCAGCATTTTGGTGCCAACAATTTTGAACCCTGCAGCTTCAAAgcgcg                              <  1:401002/125‑1 (MQ=255)
                                                                                                                  gAATTCAACCAGACCATCAAGGAACGGTTTTCCATCGTGTTCAGCATAAAAGCCACGTGCCTGTTCAACGGTCAGGTGCAGCATTTTGGTGCCAACAATTTTGAACCCTGCAGCTTCAAAgcg                                >  2:596442/1‑123 (MQ=255)
                                                                                                                  gAATTCAACCAGACCATCAAGGAACGGTTTTCCATCGTGTTCAGCATAAAAGCCACGTGCCTGTTCAACGGTCAGGTGCAGCATTTTGGTGCCAACAATTTTGAACCCTGCAGCTTCAAAgcg                                <  1:596442/123‑1 (MQ=255)
                                                                                                                  gAATTCAACCAGACCATCAAGGAACGGTTTTCCATCGTGTTCAGCATAAAAGCCACGTGCCTGTTCAACGGTCAGGTGCAGCATTTTGGTGCCAACAATTTTGAACCCTGCAGCTTCAAAGCGCGCAAAGATATTAcc                 >  2:389164/1‑138 (MQ=255)
                                                                                                                  gAATTCAACCAGACCATCAAGGAACGGTTTTCCATCGTGTTCAGCATAAAAGCCACGTGCCTGTTCAACGGTCAGGAGCAGCATTTTGGTGCCAACAATTTTGAACCCTGCAGCTTCAAAGCGCGCAAAGATATTAcc                 >  2:914790/1‑138 (MQ=255)
                                                                                                                         aCCAGACCATCAAGGAACGGTTTTCCATCGTGTTCAGCATAAAAGCCACGTGCCTGTTCAACGGTCAGGTGCAGCATTTTGGTGCCAACAATTTTGAACCCTGCAGCTTCAAAGCGCGCAAAGATATTACCAATGACg          >  1:281178/1‑138 (MQ=255)
                                                                                                                         aCCAGACCATCAAGGAACGGTTTTCCATCGTGTTCAGCATAAAAGCCACGTGCCTGTTCAACGGTCAGGTGCAGCATTTTGGTGCCAACAATTTTGAACCCTGCAGCTTCAAAGCGCGCAAAGATATTACCAATGACg          >  2:930617/1‑138 (MQ=255)
                                                                                                                               ccATCAAGGAACGGTTTTCCATCGTGTTCAGCATAAAAGCCACGTGCCTGTTCAACGGTCAGGTGCAGCATTTTGGTGCCAACAATTTTGAACCCTGCAGCTTCAAAGCGCGCAAAGATATTACCAATGACGtttttt    >  2:704184/1‑138 (MQ=255)
                                                                                                                               ccATCAAGGAACGGTTTTCCATCGTGTTCAGCATAAAAGCCACGTGCCTGTTCAACGGTCAGGTGCAGCATTTTGGTGCCAACAATTTTGAACCCTGCAGCTTCAAAGCGCGCAAAGATATTACCAATGACGtttttt    >  1:200132/1‑138 (MQ=255)
                                                                                                                                 aTCAAGGAACGGTTTTCCATCGTGTTCAGCATAAAAGCCACGTGCCTGTTCAACGGTCAGGTGCAGCATTTTGGTGCCAACAATTTTGAACCCTGCAGCTTCAAAGCGCGCAAAGATATTACCAATGACGTTTTTTGc  >  2:384423/1‑138 (MQ=255)
                                                                                                                                      |                                                                                                                                    
GCGCAGAGTACCAGCCAGTGCGTTTGCCGGATTGGTCGCGCCCAGCAGATCGCGGTGACGCTGAACGGCGTTTTCACCTTCCAGCACGGAAACCACGATCGGGCCAGAGGTCATGAATTCAACCAGACCATCAAAGAACGGTTTTCCATCGTGTTCAGCATAAAAGCCACGTGCCTGTTCAACGGTCAGGTGCAGCATTTTGGTGCCAACAATTTTGAACCCTGCAGCTTCAAAGCGCGCAAAGATATTACCAATGACGTTTTTTGC  >  NC_000913/2644553‑2644819

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A