Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A3 F28 I1 R1
|
120 |
93.5 |
3664254 |
88.3% |
3235536 |
136.4 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,708,278 |
C→T |
W159* (TGG→TGA) |
rseB ← |
anti‑sigma factor stabilizing protein RseB |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,708,278 | 0 | C | T | 100.0%
| 357.3
/ NA
| 101 | W159* (TGG→TGA) | rseB | anti‑sigma factor stabilizing protein RseB |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (46/55); total (46/55) |
Only 100 of 104 total aligned reads displayed.
TGCCTTCGCCAGCGTCTGCATACTGCTGCTGATATCCTGATTGACGTTAAAAGCAATCACGCGAAATTGTTCCAGCGTTTCACCATCGCGATCAAGGAGATCAACCCGCATCGGTAATTTCGATTCGGTGTCCATCCACACGATGTAGCTGTAGCGTGTACCATCTCGGGCAACCACGCGAATGACTTCGCAAAGACGATCAGCAATACGCGTGCGCCCGACGGAGATAAAGTCGTAGTAAGGAGAAAGGCGTTTGAAATCGG > NC_000913/2708143‑2708405
|
tGCCTTCGCCAGCGTCTGCATACTGCTGCTGATATCCTGATTGACGTTAAAAGCAATCACGCGAAATTGTTCCAGCGTTTCACCATCGCGATCAAGGAGATCAACCCGCATCGGTAATTTCGATTCGGTGtccattca < 1:1215111/138‑1 (MQ=255)
tGCCTTCGCCAGCGTCTGCATACTGCCGCTGATATCCTGATTGACGTTAAAAGCAATCACGCGAAATTGTTCCAGCGTTTCACCATCGCGATCAAGGAGATCAACCCGCATCGGTAATTTCGATTCGGTGtccattca < 2:483595/138‑1 (MQ=255)
ttCGCCAGCGTCTGCATACTGCTGCTGATATCCTGATTGACGTTAAAAGCAATCACGCGAAATTGTTCCAGCGTTTCACCATCGCGATCAAGGAGATCAACCCGCATCGGTAATTTCGATTCGGTGTCCATTCACACg > 2:1506440/1‑138 (MQ=255)
tCGCCAGCGTCTGCATACTGCTGCTGATATCCTGATTGACGTTAAAAGCAATCACGCGAAATTGTTCCAGCGTTTCACCATCGCGATCAAGGAGATCAACCCGCATCGGTAATTTCGATTCGGTGTCCATTCACACGa < 1:129343/138‑1 (MQ=255)
cGCCAGCGTCTGCATACTGCTGCTGATATCCTGATTGACGTTAAAAGCAATCACGCGAAATTGTTCCAGCGTTTCACCATCGCGATCAAGGAGATCAACCCGCATCGGTAATTTCGATTCGGTGTCCATTCACACGAt > 1:1562371/1‑138 (MQ=255)
ccAGCGTCTGCATACTGCTGCTGATATCCTGATTGACGTTAAAAGCAATCACGCGAAATTGTTCCAGCGTTTCACCATCGCGATCAAGGAGATCAACCCGCATCGGTAATTTCGATTCGGTGTCCATTCACACGAtgt < 2:1562371/138‑1 (MQ=255)
aGCGTCTGCATACTGCTGCTGATATCCTGATTGACGTTAAAAGCAATCACGCGAAATTGTTCCAGCGTTTCACCATCGCGATCAAGGAGATCAACCCGCATCGGTAATTTCGATTCGGTGTCCATTCACACGAtgtag < 1:947466/138‑1 (MQ=255)
tCTGCATACTGCTGCTGATATCCTGATTGACGTTAAAAGCAATCACGCGAAATTGTTCCAGCGTTTCACCATCGCGATCAAGGAGATCAACCCGCATCGGTAATTTCGATTCGGTGTCCATTCACACGAtgtagctgt < 1:1548502/138‑1 (MQ=255)
cTGCATACTGCTGCTGATATCCTGATTGACGTTAAAAGCAATCACGCGAAATTGTTCCAGCGTTTCACCATCGCGATCAAGGAGATCAACCCGCATCGGTAATTTCGATTCGGTGTCCATTCACACGAtgtagctgta < 2:522227/138‑1 (MQ=255)
aTACTGCTGCTGATATCCTGATTGACGTTAAAAGCAATCACGCGAAATTGTTCCAGCGTTTCACCATCGCGATCAAGGAGATCAACCCGCATCGGTAATTTCGATTCGGTGTCCATTCACACGATGTAGCTGTAGCgt > 2:42929/1‑138 (MQ=255)
aTACTGCTGCTGATATCCTGATTGACGTTAAAAGCAATCACGCGAAATTGTTCCAGCGTTTCACCATCGCGATCAAGGAGATCAACCCGCATCGGTAATTTCGATTCGGTGTCCATTCACACGATGTAGCTGTAGCgt < 2:1306019/138‑1 (MQ=255)
tACTGCTGCTGATATCCTGATTGACGTTAAAAGCAATCACGCGAAATTGTTCCAGCGTTTCACCATCGCGATCAAGGAGATCAACCCGCATCGGTAATTTCGATTCGGTGTCCATTCACACGATGTAGCTGTAGCgtg < 2:790029/138‑1 (MQ=255)
tACTGCTGCTGATATCCTGATTGACGTTAAAAGCAATCACGCGAAATTGTTCCAGCGTTTCACCATCGCGATCAAGGAGATCAACCCGCATCGGTAATTTCGATTCGGTGTCCATTCACACGATGTAGCTGTAGCgtg < 2:397408/138‑1 (MQ=255)
ctgctgATATCCTGATTGACGTTAAAAGCAATCACGCGAAATTGTTCCAGCGTTTCACCATCGCGATCAAGGAGATCAACCCGCATCGGTAATTTCGATTCGGTGTCCATTCACACGATGTAGCTGTAGCGTGTACCa < 1:1083569/138‑1 (MQ=255)
tgctgATATCCTGATTGACGTTAAAAGCAATCACGCGAAATTGTTCCAGCGTTTCACCATCGCGATCAAGGAGATCAACCCGCATCGGTAATTTCGATTCGGTGTCCATTCACACGATGTAGCTGTAGCGTGTACCAt > 1:1819692/1‑138 (MQ=255)
tgctgATATCCTGATTGACGTTAAAAGCAATCACGCGAAATTGTTCCAGCGTTTCACCATCGCGATCAAGGAGATCAACCCGCATCGGTAATTTCGATTCGGTGTCCATTCACACGATGTAGCTGTAGCGTGTACCAt > 1:1655206/1‑138 (MQ=255)
tgctgATATCCTGATTGACGTTAAAAGCAATCACGCGAAATTGTTCCAGCGTTTCACCATCGCGATCAAGGAGATCAACCCGCATCGGTAATTTCGATTCGGTGTCCATTCACACGATGTAGCTGTAGCGTGTACCAt > 1:1614923/1‑138 (MQ=255)
tgctgATATCCTGATTGACGTTAAAAGCAATCACGCGAAATTGTTCCAGCGTTTCACCATCGCGATCAAGGAGATCAACCCGCATCGGTAATTTCGATTCGGTGTCCATTCACACGATGTAGCTGTAGCGTGTACCAt > 1:315937/1‑138 (MQ=255)
tgctgATATCCTGATTGACGTTAAAAGCAATCACGCGAAATTGTTCCAGCGTTTCACCATCGCGATCAAGGAGATCAACCCGCATCGGTAATTTCGATTCGGTGTCCATTCACACGATGTAGCTGTAGCGTGTACCAt > 2:1448137/1‑138 (MQ=255)
tgctgATATCCTGATTGACGTTAAAAGCAATCACGCGAAATTGTTCCAGCGTTTCACCATCGCGATCAAGGAGATCAACCCGCATCGGTAATTTCGATTCGGTGTCCATTCACACGATGTAGCTGTAGCGTGTACCAt > 2:293306/1‑138 (MQ=255)
tgctgATATCCTGATTGACGTTAAAAGCAATCACGCGAAATTGTTCCAGCGTTTCACCATCGCGATCAAGGAGATCAACCCGCATCGGTAATTTCGATTCGGTGTCCATTCACACGATGTAGCTGTAGCGTGTACCAt > 1:124857/1‑138 (MQ=255)
gctgATATCCTGATTGACGTTAAAAGCAATCACGCGAAATTGTTCCAGCGTTTCACCATCGCGATCAAGGAGATCAACCCGCATCGGTAATTTCGATTCGGTGTCCATTCACACGATGTAGCTGTAGCGTGTACCAtc > 1:717868/1‑138 (MQ=255)
gctgATATCCTGATTGACGTTAAAAGCAATCACGCGAAATTGTTCCAGCGTTTCACCATCGCGATCAAGGAGATCAACCCGCATCGGTAATTTCGATTCGGTGTCCATTCACACGATGTAGCTGTAGCGTGTACCAtc > 2:1339870/1‑138 (MQ=255)
gctgATATCCTGATTGACGTTAAAAGCAATCACGCGAAATTGTTCCAGCGTTTCACCATCGCGATCAAGGAGATCAACCCGCATCGGTAATTTCGATTCGGTGTCCATTCACACGATGTAGCTGTAGCGTGTACCAtc > 1:1808488/1‑138 (MQ=255)
gctgATATCCTGATTGACGTTAAAAGCAATCACGCGAAATTGTTCCAGCGTTTCACCATCGCGATCAAGGAGATCAACCCGCATCGGTAATTTCGATTCGGTGTCCATTCACACGATGTAGCTGTAGCGTGTACCAtc > 1:255003/1‑138 (MQ=255)
tgATATCCTGATTGACGTTAAAAGCAATCACGCGAAATTGTTCCAGCGTTT‑ACCATCGCGATCAAGGAGATCAACCCGCATCGGTAATTTCGATTCGGTGTCCATTCACACGATGTAGCTGTAGCGTGTACCATCTCg < 2:1071709/138‑1 (MQ=255)
gATATCCTGATTGACGTTAAAAGCAATCACGCGAAATTGTTCCAGCGTTTCACCATCGCGATCAAGGAGATCAACCCGCATCGGTAATTTCGATTCGGTGTCCATTCACACGATGTAGCTGTAGCGTGTAcc > 1:1533104/1‑132 (MQ=255)
gATATCCTGATTGACGTTAAAAGCAATCACGCGAAATTGTTCCAGCGTTTCACCATCGCGATCAAGGAGATCAACCCGCATCGGTAATTTCGATTCGGTGTCCATTCACACGATGTAGCTGTAGCGTGTAcc < 2:1533104/132‑1 (MQ=255)
gATATCCTGATTGACGTTAAAAGCAATCACGCGAAATTGTTCCAGCGTTTCACCATCGCGATCAAGGAGATCAACCCGCATCGGTAATTTCGATTCGGTGTCCATTCACACGATGTAGCTGTAGCGTGTACCATCTCg > 1:1441530/1‑138 (MQ=255)
ccTGATTGACGTTAAAAGCAATCACGCGAAATTGTTCCAGCGTTTCACCATCGCGATCAAGGAGATCAACCCGCATCGGTAATTTCGATTCGGTGTCCATTCACACGATGTAGCTGTAGCGTGTACCATCTCGGGCaa > 2:1000344/1‑138 (MQ=255)
ccTGATTGACGTTAAAAGCAATCACGCGAAATTGTTCCAGCGTTTCACCATCGCGATCAAGGAGATCAACCCGCATCGGTAATTTCGATTCGGTGTCCATTCACACGATGTAGCTGTAGCGTGTACCATCTCGGGCaa > 2:121230/1‑138 (MQ=255)
ccTGATTGACGTTAAAAGCAATCACGCGAAATTGTTCCAGCGTTTCACCATCGCGATCAAGGAGATCAACCCGCATCGGTAATTTCGATTCGGTGTCCATTCACACGATGTAGCTGTAGCGTGTACCATCTCGGGCaa > 1:50641/1‑138 (MQ=255)
tGATTGACGTTAAAAGCAATCACGCGAAATTGTTCCAGCGTTTCACCATCGCGATCAAGGAGATCAACCCGCATCGGTAATTTCGATTCGGTGTCCATTCACACGATGTAGCTGTAGCGTGTACCATCTCGGGCAAcc > 1:1101206/1‑138 (MQ=255)
gACGTTAAAAGCAATCACGCGAAATTGTTCCAGCGTTTCACCATCGCGATCAAGGAGATCAACCCGCATCGGTAATTTCGATTCGGTGTCCATTCACACGATGTAGCTGTAGCGTGTACCATCTCGGGCAACCAcgcg < 2:1808488/138‑1 (MQ=255)
gACGTTAAAAGCAATCACGCGAAATTGTTCCAGCGTTTCACCATCGCGATCAAGGAGATCAACCCGCATCGGTAATTTCGATTCGGTGTCCATTCACACGATGTAGCTGTAGCGTGTACCATCTCGGGCAACCAcgcg > 2:1096817/1‑138 (MQ=255)
aCGTTAAAAGCAATCACGCGAAATTGTTCCAGCGTTTCACCATCGCGATCAAGGAGATCAACCCGCATCGGTAATTTCGATTCGGTGTCCATTCACACGATGTAGCTGTAGCGTGTACCATCTCGGGCAACCACGCGa > 2:535632/1‑138 (MQ=255)
gTTAAAAGCAATCACGCGAAATTGTTCCAGCGTTTCACCATCGCGATCAAGGAGATCAACCCGCATCGGTAATTTCGATTCGGTGTCCATTCACACGATGTAGCTGTAGCGTGTACCATCTCGGGCAACCACGCGAAt < 2:1101206/138‑1 (MQ=255)
ttAAAAGCAATCACGCGAAATTGTTCCAGCGTTTCACCATCGCGATCAAGGAGATCAACCCGCATCGGTAATTTCGATTCGGTGTCCATTCACACGATGTAGCTGTAGCGTGTACCATCTCGGGCAACCACGCGAATg > 1:1275296/1‑138 (MQ=255)
ttAAAAGCAATCACGCGAAATTGTTCCAGCGTTTCACCATCGCGATCAAGGAGATCAACCCGCATCGGTAATTTCGATTCGGTGTCCATTCACACGATGTAGCTGTAGCGTGTACCATCTCGGGCAACCACGCGAATg > 2:1636959/1‑138 (MQ=255)
ttAAAAGCAATCACGCGAAATTGTTCCAGCGTTTCACCATCGCGATCAAGGAGATCAACCCGCATCGGTAATTTCGATTCGGTGTCCATTCACACGATGTAGCTGTAGCGTGTACCATCTCGGGCAACCACGCGAATg > 2:58262/1‑138 (MQ=255)
ttAAAAGCAATCACGCGAAATTGTTCCAGCGTTTCACCATCGCGATCAAGGAGATCAACCCGCATCGGTAATTTCGATTCGGTGTCCATTCACACGATGTAGCTGTAGCGTGTACCATCTCGGGCAACCACGCGAATg > 2:689569/1‑138 (MQ=255)
aGCAATCACGCGAAATTGTTCCAGCGTTTCACCATCGCGATCAAGGAGATCAACCCGCATCGGTAATTTCGATTCGGTGTCCATTCACACGATGTAGCTGTAGCGTGTACCATCTCGGGCAACCACGCGAATGACTTc > 1:815354/1‑138 (MQ=255)
cAATCACGCGAAATTGTTCCAGCGTTTCACCATCGCGATCAAGGAGATCAACCCGCATCGGTAATTTCGATTCGGTGTCCATTCACACGATGTAGCTGTAGCGTGTACCATCTCGGGCAACCACGCGAATGACTTCGc < 2:601511/138‑1 (MQ=255)
aTCACGCGAAATTGTTCCAGCGTTTCACCATCGCGATCAAGGAGATCAACCCGCATCGGTAATTTCGATTCGGTGTCCATTCACACGATGTAGCTGTAGCGTGTGCCATCTCGGGCAACCACGCGAATGACTTCGCaa < 1:1448137/138‑1 (MQ=255)
aTCACGCGAAATTGTTCCAGCGTTTCACCATCGCGATCAAGGAGATCAACCCGCATCGGTAATTTCGATTCGGTGTCCATTCACACGATGTAGCTGTAGCGTGTACCATCTCGGGCAACCACGCGAATGACTTCGCaa < 1:638086/138‑1 (MQ=255)
aTCACGCGAAATTGTTCCAGCGTTTCACCATCGCGATCAAGGAGATCAACCCGCATCGGTAATTTCGATTCGGTGTCCATTCACACGATGTAGCTGTAGCGTGTACCATCTCGGGCAACCACGCGAATGACTTCGCaa < 1:1315799/138‑1 (MQ=255)
cgcgAAATTGTTCCAGCGTTTCACCATCGCGATCAAGGAGATCAACCCGCATCGGTAATTTCGATTCGGTGTCCATTCACACGATGTAGCTGTAGCGTGTACCATCTCGGGCAACCACGCGAATGACTTCGCAAAGAc < 2:110649/138‑1 (MQ=255)
gcgAAATTGTTCCAGCGTTTCACCATCGCGATCAAGGAGATCAACCCGCATCGGTAATTTCGATTCGGTGTCCATTCACACGATGTAGCTGTAGCGTGTACCATCTCGGGCAACCACGCGAATGACTTCGCAAAGACg < 2:1655206/138‑1 (MQ=255)
aaaTTGTTCCAGCGTTTCACCATCGCGATCAAGGAGATCAACCCGCATCGGTAATTTCGATTCGGTGTCCATTCACACGATGTAGCTGTAGCGTGTACCATCTCGGGCAACCACGCGAATGACTTCGCAAAGACGATc < 1:689569/138‑1 (MQ=255)
aaaTTGTTCCAGCGTTTCACCATCGCGATCAAGGAGATCAACCCGCATCGGTAATTTCGATTCGGTGTCCATTCACACGATGTAGCTGTAGCGTGTACCATCTCGGGCAACCACGCGAATGACTTCGCAAAGACGATc > 2:122516/1‑138 (MQ=255)
tGTTCCAGCGTTTCACCATCGCGATCAAGGAGATCAACCCGCATCGGTAATTTCGATTCGGTGTCCATTCACACGATGTAGCTGTAGCGTGTACCATCTCGGGCAACCACGCGAATGACTTCGCAAAGACGATCAGCa < 1:58262/138‑1 (MQ=255)
cAGCGTTTCACCATCGCGATCAAGGAGATCAACCCGCATCGGTAATTTCGATTCGGTGTCCATTCACACGATGTAGCTGTAGCGTGTACCATCTCGGGCAACCACGCGAATGACTTCGCAAAGACGATCAGCAATAcg > 2:375282/1‑138 (MQ=255)
aCCATCGCGATCAAGGAGATCAACCCGCATCGGTAATTTCGATTCGGTGTCCATTCACACGATGTAGCTGTAGCGTGTACCATCTCGGGCAACCACGCGAATGACTTCGCAAAGACGATCAGCAATACGCGTGCGccc > 2:1751401/1‑138 (MQ=255)
aCCATCGCGATCAAGGAGATCAACCCGCATCGGTAATTTCGATTCGGTGTCCATTCACACGATGTAGCTGTAGCGTGTACCATCTCGGGCAACCACGCGAATGACTTCGCAAAGACGATCAGCAATACGCGTGCGccc > 2:924508/1‑138 (MQ=255)
ccATCGCGATCAAGGAGATCAACCCGCATCGGTAATTTCGATTCGGTGTCCATTCACACGATGTAGCTGTAGCGTGTACCATCTCGGGCAACCACGCGAATGACTTCGCAAAGACGATCAGCAATACGCGTGCGCCCg < 2:815354/138‑1 (MQ=255)
cgATCAAGGAGATCAACCCGCATCGGTAATTTCGATTCGGTGTCCATTCACACGATGTAGCTGTAGCGTGTACCATCTCGGGCAACCACGCGAATGACTTCGCAAAGACGATCAGCAATACGCGTGCGCCCGACGgag < 1:1234628/138‑1 (MQ=255)
cgATCAAGGAGATCAACCCGCATCGGTAATTTCGATTCGGTGTCCATTCACACGATGTAGCTGTAGCGTGTACCATCTCGGGCAACCACGCGAATGACTTCGCAAAGACGATCAGCAATACGCGTGCGCCCGACGgag > 1:1533350/1‑138 (MQ=255)
gATCAAGGAGATCAACCCGCATCGGTAATTTCGATTCGGTGTCCATTCACACGATGTAGCTGTAGCGTGTACCATCTCGGGCAACCACGCGAATGACTTCGCAAAGACGATCAGCAATACGCGTGCGCCCGACGgaga > 1:874140/1‑138 (MQ=255)
gATCAAGGAGATCAACCCGCATCGGTAATTTCGATTCGGTGTCCATTCACACGATGTAGCTGTAGCGTGTACCATCTCGGGCAACCACGCGAATGACTTCGCAAAGACGATCAGCAATACGCGTGCGCCCGACGgaga > 1:1761672/1‑138 (MQ=255)
gATCAAGGAGATCAACCCGCATCGGTAATTTCGATTCGGTGTCCATTCACACGATGTAGCTGTAGCGTGTACCATCTCGGGCAACCACGCGAATGACTTCGCAAAGACGATCAGCAATACGCGTGCGCCCGACGgaga < 2:1533350/138‑1 (MQ=255)
cAAGGAGATCAACCCGCATCGGTAATTTCGATTCGGTGTCCATTCACACGATGTAGCTGTAGCGTGTACCATCTCGGGCAACCACGCGAATGACTTCGCAAAGACGATCAGCAATACGCGTGCGCCCGACGgag < 1:354691/134‑1 (MQ=255)
cAAGGAGATCAACCCGCATCGGTAATTTCGATTCGGTGTCCATTCACACGATGTAGCTGTAGCGTGTACCATCTCGGGCAACCACGCGAATGACTTCGCAAAGACGATCAGCAATACGCGTGCGCCCGACGgag > 2:354691/1‑134 (MQ=255)
cAAGGAGATCAACCCGCATCGGTAATTTCGATTCGGTGTCCATTCACACGATGTAGCTGTAGCGTGTACCATCTCGGGCAACCACGCGAATGACTTCGCAAAGACGATCAGCAATACGCGTGCGCCCGACGGAGATaa < 2:268886/138‑1 (MQ=255)
aaGGAGATCAACCCGCATCGGTAATTTCGATTCGGTGTCCATTCACACGATGTAGCTGTAGCGTGTACCATCTCGGGCAACCACGCGAATGACTTCGCAAAGACGATCAGCAATACGCGTGCGCCCGACGGAGATaaa < 1:293306/138‑1 (MQ=255)
ggAGATCAACCCGCATCGGTAATTTCGATTCGGTGTCCATTCACACGATGTAGCTGTAGCGTGTACCATCTCGGGCAACCACGCGAATGACTTCGCAAAGACGATCAGCAATACGCGTGCGCCCGACGGAGATAAAGt > 2:1564411/1‑138 (MQ=255)
ggAGATCAACCCGCATCGGTAATTTCGATTCGGTGTCCATTCACACGATGTAGCTGTAGCGTGTACCATCTCGGGCAACCACGCGAATGACTTCGCAAAGACGATCAGCAATACGCGTGCGCCCGACGGAGATAAAGt < 1:375282/138‑1 (MQ=255)
agaTCAACCCGCATCGGTAATTTCGATTCGGTGTCCATTCACACGATGTAGCTGTAGCGTGTACCATCTCGGGCAACCACGCGAATGACTTCGCAAAGACGATCAGCAATACGCGTGCGCCCGACGGAGATAAAGTCg < 1:535632/138‑1 (MQ=255)
agaTCAACCCGCATCGGTAATTTCGATTCGGTGTCCATTCACACGATGTAGCTGTAGCGTGTACCATCTCGGGCAACCACGCGAATGACTTCGCAAAGACGATCAGCAATACGCGTGCGCCCGACGGAGATAAAGTCg < 1:1048269/138‑1 (MQ=255)
aTCAACCCGCATCGGTAATTTCGATTCGGTGTCCATTCACACGATGTAGCTGTAGCGTGTACCATCTCGGGCAACCACGCGAATGACTTCGCAAAGACGATCAGCAATACGCGTGCGCTCGACGGAGATAAAGTCgta < 2:315937/138‑1 (MQ=255)
aTCAACCCGCATCGGTAATTTCGATTCGGTGTCCATTCACACGATGTAGCTGTAGCGTGTACCATCTCGGGCAACCACGCGAATGACTTCGCAAAGACGATCAGCAATACGCGTGCGCCCGACGGAGATAAAGTCgta < 1:42929/138‑1 (MQ=255)
aTCAACCCGCATCGGTAATTTCGATTCGGTGTCCATTCACACGATGTAGCTGTAGCGTGTACCATCTCGGGCAACCACGCGAATGACTTCGCAAAGACGATCAGCAATACGCGTGCGCCCGACGGAGATAAAGTCgta < 2:1439138/138‑1 (MQ=255)
aTCAACCCGCATCGGTAATTTCGATTCGGTGTCCATTCACACGATGTAGCTGTAGCGTGTACCATCTCGGGCAACCACGCGAATGACTTCGCAAAGACGATCAGCAATACGCGTGCGCCCGACGGAGATAAAGTCgta < 2:255003/138‑1 (MQ=255)
cAACCCGCATCGGTAATTTCGATTCGGTGTCCATTCACACGATGTAGCTGTAGCGTGTACCATCTCGGGCAACCACGCGAATGACTTCGCAAAGACGATCAGCAATACGCGTGCGccc < 1:958332/118‑1 (MQ=255)
cAACCCGCATCGGTAATTTCGATTCGGTGTCCATTCACACGATGTAGCTGTAGCGTGTACCATCTCGGGCAACCACGCGAATGACTTCGCAAAGACGATCAGCAATACGCGTGCGCCCGACGgaga > 2:198453/1‑126 (MQ=255)
cAACCCGCATCGGTAATTTCGATTCGGTGTCCATTCACACGATGTAGCTGTAGCGTGTACCATCTCGGGCAACCACGCGAATGACTTCGCAAAGACGATCAGCAATACGCGTGCGCCCGACGgaga < 1:198453/126‑1 (MQ=255)
ccGCATCGGTAATTTCGATTCGGTGTCCATTCACACGATGTAGCTGTAGCGTGTACCATCTCGGGCAACCACGCGAATGACTTCGCAAAGACGATCAGCAATACGCGTGCGCCCGACGGAGATAAAGt < 2:69797/128‑1 (MQ=255)
ccGCATCGGTAATTTCGATTCGGTGTCCATTCACACGATGTAGCTGTAGCGTGTACCATCTCGGGCAACCACGCGAATGACTTCGCAAAGACGATCAGCAATACGCGTGCGCCCGACGGAGATAAAGt > 1:69797/1‑128 (MQ=255)
ccGCATCGGTAATTTCGATTCGGTGTCCATTCACACGATGTAGCTGTAGCGTGTACCATCTCGGGCAACCACGCGAATGACTTCGCAAAGACGATCAGCAATACGCGTGCGCCCGACGGAGATAAAGTCGTAGTAAgg > 1:1008851/1‑138 (MQ=255)
cATCGGTAATTTCGATTCGGTGTCCATTCACACGATGTAGCTGTAGCGTGTACCATCTCGGGCAACCACGCGAATGACTTCGCAAAGACGATCAGCAATACGCGTGCGCCCGACGGAGATAAAGTCGTAGTAAGgaga > 2:693568/1‑138 (MQ=255)
cGGTAATTTCGATTCGGTGTCCATTCACACGATGTAGCTGTAGCGTGTACCATCTCGGGCAACCACGCGAATGACTTCGCAAAGACGATCAGCAATACGCGTGCGCCCGACGGAGATAAAGTCGTAGTAAGGAGAAAg > 1:724026/1‑138 (MQ=255)
cGGTAATTTCGATTCGGTGTCCATTCACACGATGTAGCTGTAGCGTGTACCATCTCGGGCAACCACGCGAATGACTTCGCAAAGACGATCAGCAATACGCGTGCGCCCGACGGAGATAAAGTCGTAGTAAGGAGAAAg > 2:622162/1‑138 (MQ=255)
cGGTAATTTCGATTCGGTGTCCATTCACACGATGTAGCTGTAGCGTGTACCATCTCGGGCAACCACGCGAATGACTTCGCAAAGACGATCAGCAATACGCGTGCGCCCGACGGAGATAAAGTCGTAGTAAGGAGAAAg > 1:347778/1‑138 (MQ=255)
aTTTCGATTCGGTGTCCATTCACACGATGTAGCTGTAGCGTGTACCATCTCGGGCAACCACGCGAATGACTTCGCAAAGACGATCAGCAATACGCGTGCGCCCGACGGAGATAAAGTCGTAGTAAGGAGAAAGGCGtt > 2:1719853/1‑138 (MQ=255)
cGATTCGGTGTCCATTCACACGATGTAGCTGTAGCGTGTACCATCTCGGGCAACCACGCGAATGACTTCGCAAAGACGATCAGCAATACGCGTGCGCCCGACGGAGATAAAGTCGTAGTAAGGAGAAAGGCGTTTGaa < 2:1441530/138‑1 (MQ=255)
cGATTCGGTGTCCATTCACACGATGTAGCTGTAGCGTGTACCATCTCGGGCAACCACGCGAATGACTTCGCAAAGACGATCAGCAATACGCGTGCGCCCGACGGAGATAAAGTCGTAGTAAGGAGAAAGGCGTTTGaa < 2:1166680/138‑1 (MQ=255)
cGATTCGGTGTCCATTCACACGATGTAGCTGTAGCGTGTACCATCTCGGGCAACCACGCGAATGACTTCGCAAAGACGATCAGCAATACGCGTGCGCCCGACGGAGATAAAGTCGTAGTAAGGAGAAAGGCGTTTGaa < 1:1060046/138‑1 (MQ=255)
cGATTCGGTGTCCATTCACACGATGTAGCTGTAGCGTGTACCATCTCGGGCAACCACGCGAATGACTTCGCAAAGACGATCAGCAATACGCGTGCGCCCGACGGAGATAAAGTCGTAGTAAGGAGAAAGGCGTTTGaa < 1:1130073/138‑1 (MQ=255)
cGATTCGGTGTCCATTCACACGATGTAGCTGTAGCGTGTACCATCTCGGGCAACCACGCGAATGACTTCGCAAAGACGATCAGCAATACGCGTGCGCCCGACGGAGATAAAGTCGTAGTAAGGAGAAAGGCGTTTGaa < 1:121230/138‑1 (MQ=255)
gATTCGGTGTCCATTCACACGATGTAGCTGTAGCGTGTACCATCTCGGGCAACCACGCGAATGACTTCGCAAAGACGATCAGCAATACGCGTGCGCCCGACGGAGATAAAGTCGTAGTAAGGAGAAAGGCGTTTGaaa > 1:546503/1‑138 (MQ=255)
aTTCGGTGTCCATTCACACGATGTAGCTGTAGCGTGTACCATCTCGGGCAACCACGCGAATGACTTCGTAAAGACGATCAGCAATACGCGTGCGCCCGACGGAGATAAAGTCGTAGTAAGGAGAAAGGCGTTTGAAAt < 2:1275296/138‑1 (MQ=255)
aTTCGGTGTCCATTCACACGATGTAGCTGTAGCGTGTACCATCTCGGGCAACCACGCGAATGACTTCGCAAAGACGATCAGCAATACGCGTGCGCCCGACGGAGATAAAGTCGTAGTAAGGAGAAAGGCGTTTGAAAt < 1:1751401/138‑1 (MQ=255)
aTTCGGTGTCCATTCACACGATGTAGCTGTAGCGTGTACCATCTCGGGCAACCACGCGAATGACTTCGCAAAGACGATCAGCAATACGCGTGCGCCCGACGGAGATAAAGTCGTAGTAAGGAGAAAGGCGTTTGAAAt < 1:693568/138‑1 (MQ=255)
aTTCGGTGTCCATTCACACGATGTAGCTGTAGCGTGTACCATCTCGGGCAACCACGCGAATGACTTCGCAAAGACGATCAGCAATACGCGTGCGCCCGACGGAGATAAAGTCGTAGTAAGGAGAAAGGCGTTTGAAAt < 2:1761672/138‑1 (MQ=255)
tCGGTGTCCATTCACACGATGTAGCTGTAGCGTGTACCATCTCGGGCAAGCACGCGAATGACTTCGCAAAGACGATCAGCAATACGCGTGCGCCCGACGGAGATAAAGTCGTAGTAAGGAGAAAGGCGTTTGAAATCg < 1:1530481/138‑1 (MQ=255)
tCGGTGTCCATTCACACGATGTAGCTGTAGCGTGTACCATCTCGGGCAACCACGCGAATGACTTCGCAAAGACGATCAGCAATACGCGTGCGCCCGACGGAGATAAAGTCGTAGTAAGGAGAAAGGCGTTTGAAATCg < 1:122516/138‑1 (MQ=255)
tCGGTGTCCATTCACACGATGTAGCTGTAGCGTGTACCATCTCGGGCAACCACGCGAATGACTTCGCAAAGACGATCAGCAATACGCGTGCGCCCGACGGAGATAAAGTCGTAGTAAGGAGAAAGGCGTTTGAAATCg < 2:1791220/138‑1 (MQ=255)
tCGGTGTCCATTCACACGATGTAGCTGTAGCGTGTACCATCTCGGGCAACCACGCGAATGACTTCGCAAAGACGATCAGCAATACGCGTGCGCCCGACGGAGATAAAGTCGTAGTAAGGAGAAAGGCGTTTGAAATCg < 2:833418/138‑1 (MQ=255)
tCGGTGTCCATTCACACGATGTAGCTGTAGCGTGTACCATCTCGGGCAACCACGCGAATGACTTCGCAAAGACGATCAGCAATACGCGTGCGCCCGACGGAGATAAAGTCGTAGTAAGGAGAAAGGCGTTTGAAATCg < 2:874140/138‑1 (MQ=255)
cGGTGTCCATTCACACGATGTAGCTGTAGCGTGTACCATCTCGGGCAACCACGCGAATGACTTCGCAAAGACGATCAGCAATACGCGTGCGCCCGACGGAGATAAAGTCGTAGTAAGGAGAAAGGCGTTTGAAATCgg < 2:546503/138‑1 (MQ=255)
cGGTGTCCATTCACACGATGTAGCTGTAGCGTGTACCATCTCGGGCAACCACGCGAATGACTTCGCAAAGACGATCAGCAATACGCGTGCGCCCGACGGAGATAAAGTCGTAGTAAGGAGAAAGGCGTTTGAAATCgg < 2:347778/138‑1 (MQ=255)
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TGCCTTCGCCAGCGTCTGCATACTGCTGCTGATATCCTGATTGACGTTAAAAGCAATCACGCGAAATTGTTCCAGCGTTTCACCATCGCGATCAAGGAGATCAACCCGCATCGGTAATTTCGATTCGGTGTCCATCCACACGATGTAGCTGTAGCGTGTACCATCTCGGGCAACCACGCGAATGACTTCGCAAAGACGATCAGCAATACGCGTGCGCCCGACGGAGATAAAGTCGTAGTAAGGAGAAAGGCGTTTGAAATCGG > NC_000913/2708143‑2708405
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
