Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A3 F28 I1 R1
|
120 |
93.5 |
3664254 |
88.3% |
3235536 |
136.4 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,159,844 |
G→A |
P435S (CCA→TCA) |
ygiQ ← |
radical SAM superfamily protein YgiQ |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,159,844 | 0 | G | A | 98.2%
| 385.1
/ ‑4.1
| 112 | P435S (CCA→TCA) | ygiQ | radical SAM superfamily protein YgiQ |
| Reads supporting (aligned to +/- strand): ref base G (1/1); new base A (55/55); total (56/56) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 112 total aligned reads displayed.
GGCGATAGAGGTTGATCGTTGGTTCGTGGTTCGTGTCCATGTGCGGACAAATATCCGGATAAACGCACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAGCGCAACATATACATGTTGGCAGTTGGCCCACCAAGATCGGAAATCACGCCCGTAAAACCTGGAACGGTGTCGCGGATCGCTTCGATCTCATTAATGATCGAATCTTCGGAACGGCTCTGAATAATGCGCCCTTCGTGCTCGGTGATAGAACAGAAAGA > NC_000913/3159709‑3159976
|
ggCGATAGAGGTTGATCGTTGGTTCGTGGTTCGTGTCCATGTGCGGACAAATATCCGGATAAACGCACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAGCGCAACATATACATGTTGGCAGTTGAcc < 1:580023/138‑1 (MQ=255)
gCGATAGAGGTTGATCGTTGGTTCGTGGTTCGTGTCCATGTGCGGACAAATATCCGGATAAACGCACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAGCGCAACATATACATGTTGGCAGTTGAccc > 1:928036/1‑138 (MQ=255)
gCGATAGAGGTTGATCGTTGGTTCGTGGTTCGTGTCCATGTGCGGACAAATATCCGGATAAACGCACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAGCGCAACATATACATGTTGGCAGTTGAccc > 2:967639/1‑138 (MQ=255)
gCGATAGAGGTTGATCGTTGGTTCGTGGTTCGTGTCCATGTGCGGACAAATATCCGGATAAACGCACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAGCGCAACATATACATGTTGGCAGTTGAccc < 1:1045159/138‑1 (MQ=255)
gCGATAGAGGTTGATCGTTGGTTCGTGGTTCGTGTCCATGTGCGGACAAATATCCGGATAAACGCACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAGCGCAACATATACATGTTGGCAGTTGAccc < 2:1134339/138‑1 (MQ=255)
gCGATAGAGGTTGATCGTTGGTTCGTGGTTCGTGTCCATGTGCGGACAAATATCCGGATAAACGCACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAGCGCAACATATACATGTTGGCAGTTGAccc > 2:1224863/1‑138 (MQ=255)
tAGAGGTTGATCGTTGGTTCGTGGTTCGTGTCCATGTGCGGACAAATATCCGGATAAACGCACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAGCGCAACATATACATGTTGGCAGTTGACccacca > 1:1622702/1‑138 (MQ=255)
agagGTTGATCGTTGGTTCGTGGTTCGTGTCCATGTGCGGACAAATATCCGGATAAACGCACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAGCGCAACATATACATGTTGGCAGTTGACCCACCaa > 2:1285281/1‑138 (MQ=255)
agagGTTGATCGTTGGTTCGTGGTTCGTGTCCATGTGCGGACAAATATCCGGATAAACGCACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAGCGCAACATATACATGTTGGCAGTTGACCCACCaa > 1:686093/1‑138 (MQ=255)
gTTGATCGTTGGTTCGTGGTTCGTGTCCATGTGCGGACAAATATCCGGATAAACGCACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAGCGCAACATATACATGTTGGCAGTTGACCCACCAAGATc > 1:1018094/1‑138 (MQ=255)
tCGTTGGTTCGTGGTTCGTGTCCATGTGCGGACAAATATCCGGATAAACGCACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAGCGCAACATATACATGTTGGCAGTTGACCCACCAAGATCGGaaa > 1:102638/1‑138 (MQ=255)
cGTTGGTTCGTGGTTCGTGTCCATGTGCGGACAAATATCCGGCTAAACGCACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAGCGCAACATATACATGTTGGCAGTTGACCCACCAAGATCGGAAAt < 2:1690481/138‑1 (MQ=255)
cGTTGGTTCGTGGTTCGTGTCCATGTGCGGACAAATATCCGGATAAACGCACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAGCGCAACATATACATGTTGGCAGTTGACCCACCAAGATCGGAAAt > 1:1175269/1‑138 (MQ=255)
cGTTGGTTCGTGGTTCGTGTCCATGTGCGGACAAATATCCGGATAAACGCACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAGCGCAACATATACATGTTGGCAGTTGACCCACCAAGATCGGAAAt > 1:336834/1‑138 (MQ=255)
cGTTGGTTCGTGGTTCGTGTCCATGTGCGGACAAATATCCGGATAAACGCACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAGCGCAACATATACATGTTGGCAGTTGACCCACCAAGATCGGAAAt > 1:964990/1‑138 (MQ=255)
gTTGGTTCGTGGTTCGTGTCCATGTGCGGACAAATATCCGGATAAACGCACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAGCGCAACATATACATGTTGGCAGTTGACCCACCAAGATCGGAAATc > 2:562488/1‑138 (MQ=255)
ggttcgtggttcgtGTCCATGTGCGGACAAATATCCGGATAAACGCACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAGCGCAACATATACATGTTGGCAGTTGACccacca < 2:848160/123‑1 (MQ=255)
ggttcgtggttcgtGTCCATGTGCGGACAAATATCCGGATAAACGCACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAGCGCAACATATACATGTTGGCAGTTGACccacca > 1:848160/1‑123 (MQ=255)
ttcgtggttcgtgTCCATGTGCGGACAAATATCCGGATAAACGCACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAGCGCAACATATACATGTTGGCAGTTGACCCACCAAGATCGGAAATCACGcc > 2:1748211/1‑138 (MQ=255)
ttcgtggttcgtgTCCATGTGCGGACAAATATCCGGATAAACGCACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAGCGCAACATATACATGTTGGCAGTTGACCCACCAAGATCGGAAATCACGcc > 2:1199539/1‑138 (MQ=255)
cgtggttcgtgTCCATGTGCGGACAAATATCCGGATAAACGCACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAGCGCAACATATACATGTTGGCAGTTGACCCACCAAGATCGGAAATCACGCCCg < 1:444127/138‑1 (MQ=255)
cgtggttcgtgTCCATGTGCGGACAAATATCCGGATAAACGCACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAGCGCAACATATACATGTTGGCAGTTGACCCACCAAGATCGGAAATCACGCCCg < 2:686093/138‑1 (MQ=255)
cgtggttcgtgTCCATGTGCGGACAAATATCCGGATAAACGCACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAGCGCAACATATACATGTTGGCAGTTGACCCACCAAGATCGGAAATCACGCCCg < 2:964990/138‑1 (MQ=255)
gtCCATGTGCGGACAAATATCCGGATAAACGCACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAGCGCAACATATACATGTTGGCAGTTGACCCACCAAGATCGGAAATCACGCCCGTAAAACCTgg < 1:195916/138‑1 (MQ=255)
ccATGTGCGGACAAATATCCGGATAAACGCACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAGCGCAACATATACATGTTGGCAGTTGACCCACCAAGATCGGAAATCACGCCCGTAAAACCTGGaa < 1:1554394/138‑1 (MQ=255)
ccATGTGCGGACAAATATCCGGATAAACGCACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAGCACAACATATACATGTTGGCAGTTGACCCACCAAGATCGGAAATCACGCCCGTAAAACCTGGaa < 2:1257728/138‑1 (MQ=255)
ccATGTGCGGACAAATATCAGGATAAACGCACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAGCGCAACATATACATGTTGGCAGTTGACCCACCAAGATCGGAAATCACGCCCGTAAAACCTGGaa < 1:479546/138‑1 (MQ=255)
cATGTGCGGACAAATATCCGGATAAACGCACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAGCGCAACATATACATGTTGGCAGTTGACCCACCAAGATCGGAAATCACGCCCGTAAAACCTGGAAc > 1:1655718/1‑138 (MQ=255)
aTGTGCGGACAAATATCCGGATAAACGCACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAGCGCAACATATACATGTTGGCAGTTGACCCACCAAGATCGGAAATCACGCCCGTAAAACCTGGAACg > 2:1642086/1‑138 (MQ=255)
tgtgCGGACAAATATCCGGATAAACGCACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAGCGCAACATATACATGTTGGCAGTTGACCCACCAAGATCGGAAATCACGCCCGTAAAACCTGGAACgg > 1:736615/1‑138 (MQ=255)
tgtgCGGACAAATATCCGGATAAACGCACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAGCGCAACATATACATGTTGGCAGTTGACCCACCAAGATCGGAAATCACGCCCGTAAAACCTGGAACgg > 1:120279/1‑138 (MQ=255)
gtgCGGACAAATATCCGGATAAACGCACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAGCGCAACATATACATGTTGGCAGTTGACCCACCAAGATCGGAAATCACGCCCGTAAAACCTGGAACGgt > 1:1013949/1‑138 (MQ=255)
ggACAAATATCCGGATAAACGCACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAGCGCAACATATACATGTTGGCAGTTGACCCACCAAGATCGGAAATCACGCCCGTAAAACCTGGAACGGTGTcg < 2:33340/138‑1 (MQ=255)
aCAAATATCCGGATAAACGCACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAGCGCAACATATACATGTTGGCAGTTGACCCACCAAGATCGGAAATCACGCCCGTAAAACCTGGAACGGTGTcgcg < 2:1371803/138‑1 (MQ=255)
cAAATATCCGGATAAACGCACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAGCGCAACATATACATGTTGGCAGTTGACCCACCAAGATCGGAAATCACGCCCGTAAAACCTGGAACGGTGTCGCgg > 1:985782/1‑138 (MQ=255)
cAAATATCCGGATAAACGCACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAGCGCAACATATACATGTTGGCAGTTGACCCACCAAGATCGGAAATCACGCCCGTAAAACCTGGAACGGTGTCGCgg < 1:1274759/138‑1 (MQ=255)
tCCGGATAAACGCACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAGCGCAACATATACATGTTGGCAGTTGACCCACCAAGATCGGAAATCACGCCCGTAAAACCTGGAACGGTGTCGCGGATCGCt > 1:489622/1‑138 (MQ=255)
tCCGGATAAACGCACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAGCGCAACATATACATGTTGGCAGTTGACCCACCAAGATCGGAAATCACGCCCGTAAAACCTGGAACGGTGTCGCGGATCGCt > 1:1167383/1‑138 (MQ=255)
ccGGATAAACGCACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAGCGCAACATATACATGTTGGCAGTTGACCCACCAAGATCGGAAATCACGCCCGTAAAACCTGGAACGGTGTCGCGGATCGCtt < 2:928036/138‑1 (MQ=255)
cGGATAAACGCACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAGCGCAACATATACATGTTGGCAGTTGACCCACCAAGATCGGAAATCACGCCCGTAAAACCTGGAACGGTGTCGCGGATCGCTTc < 1:1642086/138‑1 (MQ=255)
ggATAAACGCACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAGCGCAACATATACATGTTGGCAGTTGACCCACCAAGATCGGAAATCACGCCCGTAAAACCTGGAACGGTGTCGCGGATCGCTTCg < 2:1018094/138‑1 (MQ=255)
ggATAAACGCACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAGCGCAACATATACATGTTGGCAGTTGACCCACCAAGATCGGAAATCACGCCCGTAAAACCTGGAACGGTGTCGCGGATCGCTTCg < 1:629201/138‑1 (MQ=255)
ggATAAACGCACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAGCGCAACATATACATGTTGGCAGTTGACCCACCAAGATCGGAAATCACGCCCGTAAAACCTGGAACGGTGTCGCGGATCGCTTCg < 1:1285281/138‑1 (MQ=255)
gATAAACGCACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAGCGCAACATATACATGTTGGCAGTTGACCCACCAAGATCGGAAATCACGCCCGTAAAACCTGGAACGGTGTCGCGGATCGCTTCGa < 2:1168640/138‑1 (MQ=255)
aaaCGCACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAGCGCAACATATACATGTTGGCAGTTGACCCACCAAGATCGGAAATCACGCCCGTAAAACCTGGAACGGTGTCGCTGATCGCTTCGAtct > 2:1596571/1‑138 (MQ=255)
aaaCGCACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAGCGCAACATATACATGTTGGCAGTTGACCCACCAAGATCGGAAATCACGCCCGTAAAACCTGGAACGGTGTCGCGGATCGCTTCGAtct > 2:128767/1‑138 (MQ=255)
aaaCGCACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAGCGCAACATATACATGTTGGCAGTTGACCCACCAAGATCGGAAATCACGCCCGTAAAACCTGGAACGGTGTCGCGGATCGCTTCGAtct > 2:760249/1‑138 (MQ=255)
aCGCACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAGCGCAACATATACATGTTGGCAGTTGACCCACCAAGATCGGAAATCACGCCCGTAAAACCTGGAACGGTGTCGCGGATCGCTTCGAtctc < 1:418003/137‑1 (MQ=255)
aCGCACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAGCGCAACATATACATGTTGGCAGTTGACCCACCAAGATCGGAAATCACGCCCGTAAAACCTGGAACGGTGTCGCGGATCGCTTCGAtctc > 2:418003/1‑137 (MQ=255)
aCAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAGCGCAACATATACATGTTGGCAGTTGACCCACCAAGATCGGAAATCACGCCCGTAAAACCTGGAACGGTGTCGCGGATCGCTTCGATCTCATTAATGa > 1:121578/1‑138 (MQ=255)
aaGTTTGTTCAGCGCGTGGCGATTTGCAGCGCAACATATACATGTTGGCAGTTGACCCACCAAGATCGGAAATCACGCCCGTAAAACCTGGAACGGTGTCGCGGATCGCTTCGATCTCATTAATGATCGAATCTTCgg < 2:1677273/138‑1 (MQ=255)
aaGTTTGTTCAGCGCGTGGCGATTTGCAGCGCAACATATACATGTTGGCAGTTGACCCACCAAGATCGGAAATCACGCCCGTAAAACCTGGAACGGTGTCGCGGATCGCTTCGATCTCATTAATGATCGAATCTTCgg < 2:1433861/138‑1 (MQ=255)
aaGTCTGTTCAGCGCGTGGCGATTTGCAGCGCAACATATACATGTTGGCAGTTGACCCACCAAGATCGGAAATCACGCCCGTAAAACCTGGAACGGTGTCGCGGATCGCTTCGATCTCATTAATGATCGAATCTTCgg < 2:1686487/138‑1 (MQ=255)
aGTTTGTTCAGCGCGTGGCGATTTGCAGCGCAACATATACATGTTGGCAGTTGACCCACCAAGATCGGAAATCACGCCCGTAAAACCTGGAACGGTGTCGCGGATCGCTTCGATCTCATTAATGATCGAATCTTCGGa > 2:733578/1‑138 (MQ=255)
gTTTGTTCAGCGCGTGGCGATTTGCAGCGCAACATATACATGTTGGCAGTTGACCCACCAAGATCGGAAATCACGCCCGTAAAACCTGGAACGGTGTCGCGGATCGCTTCGATCTCATTAATGATCGAATCTTCGGaa < 2:616330/138‑1 (MQ=255)
gTTTGTTCAGCGCGTGGCGATTTGCAGCGCAACATATACATGTTGGCAGTTGACCCACCAAGATCGGAAATCACGCCCGTAAAACCTGGAACGGTGTCGCGGATCGCTTCGATCTCATTAATGATCGAATCTTCGGaa < 1:1215862/138‑1 (MQ=255)
gTTTGTTCAGCGCGTGGCGATTTGCAGCGCAACATATACATGTTGGCAGTTGACCCACCAAGATCGGAAATCACGCCCGTAAAACCTGGAACGGTGTCGCGGATCGCTTCGATCTCATTAATGATCGAATCTTCGGaa < 1:136898/138‑1 (MQ=255)
gTTTGTTCAGCGCGTGGCGATTTGCAGCGCAACATATACATGTTGGCAGTTGACCCACCAAGATCGGAAATCACGCCCGTAAAACCTGGAACGGTGTCGCGGATCGCTTCGATCTCATTAATGATCGAATCTTCGGaa < 2:1013949/138‑1 (MQ=255)
ttGTTCAGCGCGTGGCGATTTGCAGCGCAACATATACATGTTGGCAGTTGACCCACCAAGATCGGAAATCACGCCCGTAAAACCTGGAACGGTGTCGCGGATCGCTTCGATCTCATTAATGATCGAATCTTCGGAACg < 1:1224863/138‑1 (MQ=255)
gTGGCGATTTGCAGCGCAACATATACATGTTGGCAGTTGACCCACCAAGATCGGAAATCACGCCCGTAAAACCTGGAACGGTGTCGCGGATCGCTTCGATCTCATTAATGATCGAATCTTCGGAACGGCTCTGaataa > 2:1111456/1‑138 (MQ=255)
ggCGATTTGCAGCGCAACATATACATGTTGGCAGTTGACCCACCAAGATCGGAAATCACGCCCGTAAAACCTGGAACGGTGTCGCGGATCGCTTCGATCTCATTAATGATCGAATCTTCGGAACGGCTCTGAATAATg < 1:760249/138‑1 (MQ=255)
ggCGATTTGCAGCGCAACATATACATGTTGGCAGTTGACCCACCAAGATCGGAAATCACGCCCGTAAAACCTGGAACGGTGTCGCGGATCGCTTCGATCTCATTAATGATCGAATCTTCGGAACGGCTCTGAATAATg < 1:967639/138‑1 (MQ=255)
ggCGATTTGCAGCGCAACATATACATGTTGGCAGTTGACCCACCAAGATCGGAAATCACGCCCGTAAAACCTGGAACGGTGTCGCGGATCGCTTCGATCTCATTAATGATCGAATCTTCGGAACGGCTCTGAATAATg < 2:1053914/138‑1 (MQ=255)
gCGATTTGCAGCGCAACATATACATGTTGGCAGTTGACCCACCAAGATCGGAAATCACGCCCGTAAAACCTGGAACGGTGTCGCGGATCGCTTCGATCTCATTAATGATCGAATCTTCgg < 2:591979/120‑1 (MQ=255)
gCGATTTGCAGCGCAACATATACATGTTGGCAGTTGACCCACCAAGATCGGAAATCACGCCCGTAAAACCTGGAACGGTGTCGCGGATCGCTTCGATCTCATTAATGATCGAATCTTCgg > 1:591979/1‑120 (MQ=255)
cGATTTGCAGCGCAACATATACATGTTGGCAGTTGACCCACCAAGATCGGAAATCACGCCCGTAAAACCTGGAACGGTGTCGCGGATCGCTTCGATCTCATTAATGATCGAATCTTCGGAACGGCTCTGAATAATgcg > 1:1466047/1‑138 (MQ=255)
cGATTTGCAGCGCAACATATACATGTTGGCAGTTGACCCACCAAGATCGGAAATCACGCCCGTAAAACCTGGAACGGTGTCGCGGATCGCTTCGATCTCATTAATGATCGAATCTTCGGAACGGCTCTGAATAATgcg > 1:1340985/1‑138 (MQ=255)
tttGCAGCGCAACATATACATGTTGGCAGTTGACCCACCAAGATCGGAAATCACGCCCGTAAAACCTGGAACGGTGTCGCGGATCGCTTCGATCTCATTAATGATCGAATCTTCGGAACGGCTCTGAATAATGCGccc < 1:128767/138‑1 (MQ=255)
gcgcAACATATACATGTTGGCAGTTGACCCACCAAGATCGGAAATCACGCCCGTAAAACCTGGAACGGTGTCGCGGATCGCTTCGATCTCATTAATGATCGAATCTTCGGAACGGCTCTGAATAATGCGCCCTTCGTg < 2:336834/138‑1 (MQ=255)
gcgcAACATATACATGTTGGCAGTTGACCCACCAAGATCGGAAATCACGCCCGTAAAACCTGGAACGGTGTCGCGGATCGCTTCGATCTCATTAATGATCGAATCTTCGGAACGGCTCTGAATAATGCGCCCTTCGTg < 2:120279/138‑1 (MQ=255)
cgcAACATATACATGTTGGCAGTTGACCCACCAAGATCGGAAATCACGCCCGTAAAACCTGGAACGGTGTCGCGGATCGCTTCGATCTCATTAATGATCGAATCTTCGGAACGGCTCTGAATAATGCGCCCTTCGTGc < 1:562488/138‑1 (MQ=255)
cgcAACATATACATGTTGGCAGTTGACCCACCAAGATCGGAAATCACGCCCGTAAAACCTGGAACGGTGTCGCGGATCGCTTCGATCTCATTAATGATCGAATCTTCGGAACGGCTCTGAATAATGCGCCCTTCGTGc < 1:467529/138‑1 (MQ=255)
cgcAACATATACATGTTGGCAGTTGACCCACCAAGATCGGAAATCACGCCCGTAAAACCTGGAACGGTGTCGCGGATCGCTTCGATCTCATTAATGATCGAATCTTCGGAACGGCTCTGAATAATGCGCCCTTCGTGc < 2:1540894/138‑1 (MQ=255)
cgcAACATATACATGTTGGCAGTTGACCCACCAAGATCGGAAATCACGCCCGTAAAACCTGGAACGGTGTCGCGGATCGCTTCGATCTCATTAATGATCGAATCTTCGGAACGGCTCTGAATAATGCGCCCTTCGTGc < 2:1553235/138‑1 (MQ=255)
cgcAACATATACATGTTGGCAGTTGACCCACCAAGATCGGAAATCACGCCCGTAAAACCTGGAACGGTGTCGCGGATCGCTTCGATCTCATTAATGATCGAATCTTCGGAACGGCTCTGAATAATGCGCCCTTCGTGc < 2:121578/138‑1 (MQ=255)
aCATATACATGTTGGCAGTTGACCCACCAAGATCGGAAATCACGCCCGTAAAACCTGGAACGGTGTCGCGGATCGCTTCGATCTCATTAATGATCGAATCTTCGGAACGGCTCTGaataa < 1:1395102/120‑1 (MQ=255)
aCATATACATGTTGGCAGTTGACCCACCAAGATCGGAAATCACGCCCGTAAAACCTGGAACGGTGTCGCGGATCGCTTCGATCTCATTAATGATCGAATCTTCGGAACGGCTCTGaataa > 2:1395102/1‑120 (MQ=255)
aCATATACATGTTGGCAGTTGACCCACCAAGATCGGAAATCACGCCCGTAAAACCTGGAACGGTGTCGCGGATCGCTTCGATCTCATTAATGATCGAATCTTCGGAACGGCTCTGAATAATGCGCCCTTCGTGCTCgg > 2:1769000/1‑138 (MQ=255)
atatACATGTTGGCAGTTGACCCACCAAGATCGGAAATCACGCCCGTAAAACCTGGAACGGTGTCGCGGATCGCTTCGATCTCATTAATGATCGAATCTTCGGAACGGCTCTGAATAATGCGCCCTTCGTGCTCGGTg < 2:1466047/138‑1 (MQ=255)
aTGTTGGCAGTTGACCCACCAAGATCGGAAATCACGCCCGTAAAACCTGGAACGGTGTCGCGGATCGCTTCGATCTCATTAATGATCGAATCTTCGGAACGGCTCTGAATAATGCGCCCTTCGt > 1:1748676/1‑124 (MQ=255)
aTGTTGGCAGTTGACCCACCAAGATCGGAAATCACGCCCGTAAAACCTGGAACGGTGTCGCGGATCGCTTCGATCTCATTAATGATCGAATCTTCGGAACGGCTCTGAATAATGCGCCCTTCGt < 2:1748676/124‑1 (MQ=255)
ggCAGTTGACCCACCAAGATCGGAAATCACGCCCGTAAAACCTGGAACGGTGTCGCGGATCGCTTCGATCTCATTAATGATCGAATCTTCGGAACGGCTCTGAATAATGCGCCCTTCGTGCTCGGt < 1:1072933/126‑1 (MQ=255)
ggCAGTTGACCCACCAAGATCGGAAATCACGCCCGTAAAACCTGGAACGGTGTCGCGGATCGCTTCGATCTCATTAATGATCGAATCTTCGGAACGGCTCTGAATAATGCGCCCTTCGTGCTCGGTGATAGAACAGaa > 1:774170/1‑138 (MQ=255)
ggCAGTTGACCCACCAAGATCGGAAATCACGCCCGTAAAACCTGGAACGGTGTCGCGGATCGCTTCGATCTCATTAATGATCGAATCTTCGGAACGGCTCTGAATAATGCGCCCTTCGTGCTCGGTGATAGAACAGaa > 1:1100634/1‑138 (MQ=255)
ggCAGTTGACCCACCAAGATCGGAAATCACGCCCGTAAAACCTGGAACGGTGTCGCGGATCGCTTCGATCTCATTAATGATCGAATCTTCGGAACGGCTCTGAATAATGCGCCCTTCGTGCTCGGTGATAGAACAGaa > 1:1386894/1‑138 (MQ=255)
ggCAGTTGACCCACCAAGATCGGAAATCACGCCCGTAAAACCTGGAACGGTGTCGCGGATCGCTTCGATCTCATTAATGATCGAATCTTCGGAACGGCTCTGAATAATGCGCCCTTCGTGCTCGGTGATAGAACAGaa > 2:224738/1‑138 (MQ=255)
ggCAGTTGACCCACCAAGATCGGAAATCACGCCCGTAAAACCTGGAACGGTGTCGCGGATCGCTTCGATCTCATTAATGATCGAATCTTCGGAACGGCTCTGAATAATGCGCCCTTCGTGCTCGGTGATAGAACAGaa > 1:1200437/1‑138 (MQ=255)
ggCAGTTGACCCACCAAGATCGGAAATCACGCCCGTAAAACCTGGAACGGGGTCGCGGATCGCTTCGATCTCATTAATGATCGAATCTTCGGAACGGCTCTGAATAATGCGCCCTTCGTGCTCGGt > 2:1072933/1‑126 (MQ=255)
gCAGTTGACCCACCAAGATCGGAAATCACGCCCGTAAAACCTGGAACGGTGTCGCGGATCGCTTCGATCTCATTAATGATCGAATCTTCGGAACGGCTCTGAATAATGCGCCCTTCGTGCTCGGTGATAGAACAGaaa > 2:1492392/1‑138 (MQ=255)
cAGTTGACCCACCAAGATCGGAAATCACGCCCGTAAAACCTGGAACGGTGTCGCGGATCGCTTCGATCTCATTAATGATCGAATCTTCGGAACGGCTCTGAATAATGCGCCCTTCGTGCTCGGt < 1:1759757/124‑1 (MQ=255)
cAGTTGACCCACCAAGATCGGAAATCACGCCCGTAAAACCTGGAACGGTGTCGCGGATCGCTTCGATCTCATTAATGATCGAATCTTCGGAACGGCTCTGAATAATGCGCCCTTCGTGCTCGGt > 2:1759757/1‑124 (MQ=255)
cAGTTGACCCACCAAGATCGGAAATCACGCCCGTAAAACCTGGAACGGTGTCGCGGATCGCTTCGATCTCATTAATGATCGAATCTTCGGAACGGCTCTGAATAATGCGCCCTTCGTGCTCGGTg < 2:975322/125‑1 (MQ=255)
cAGTTGACCCACCAAGATCGGAAATCACGCCCGTAAAACCTGGAACGGTGTCGCGGATCGCTTCGATCTCATTAATGATCGAATCTTCGGAACGGCTCTGAATAATGCGCCCTTCGTGCTCGGTGATAGAACAGAAag > 2:1268808/1‑138 (MQ=255)
cAGTTGACCCACCAAGATCGGAAATCACGCCCGTAAAACCTGGAACGGTGTCGCGGATCGCTTCGATCTCATTAATGATCGAATCTTCGGAACGGCTCTGAATAATGCGCCCTTCGTGCTCGGTGATAGAACAGAAag > 1:1343885/1‑138 (MQ=255)
cAGTTGACCCACCAAGATCGGAAATCACGCCCGTAAAACCTGGAACGGTGTCGCGGATCGCTTCGATCTCATTAATGATCGAATCTTCGGAACGGCTCTGAATAATGCGCCCTTCGTGCTCGGTGATAGAACAGAAag > 2:1005941/1‑138 (MQ=255)
cAGTTGACCCACCAAGATCGGAAATCACGCCCGTAAAACCTGGAACGGTGTCGCGGATCGCTTCGATCTCATTAATGATCGAATCTTCGGAACGGCTCTGAATAATGCGCCCTTCGTGCTCGGTGATAGAACAGAAag > 1:49348/1‑138 (MQ=255)
cAGTTGACCCACCAAGATCGGAAATCACGCCCGTAAAACCTGGAACGGTGTCGCGGATCGCTTCGATCTCATTAATGATCGAATCTTCGGAACGGCTCTGAATAATGCGCCCTTCGTGCTCGGTGATAGAACAGAAag > 1:1031030/1‑138 (MQ=255)
cAGTTGACCCACCAAGATCGGAAATCACGCCCGTAAAACCTGGAACGGTGTCACGGATCGCTTCGATCTCATTAATGATCGAATCTTCGGAGCGGCTCTGAATAATGCGCCCTTCGTGCTCGGTGATAGAACAGAAag > 1:491610/1‑138 (MQ=255)
aGTTGACCCACCAAGATCGGAAATCACGCCCGTAAAACCTGGAACGGTGTCGCGGATCGCTTCGATCTCATTAATGATCGAATCTTCGGAACGGCTCTGAATAATGCGCCCTTCGTGCTCGGTGATAGAACAGAAaga > 2:169550/1‑138 (MQ=255)
aGTTGACCCACCAAGATCGGAAATCACGCCCGTAAAACCTGGAACGGTGTCACGGATCGCTTCGATCTCATTAATGATCGAATCTTCGGAGCGGCTCTGAATAATGCGCCCTTCGTGCTCGGTGATAGAACAGAAaga < 2:491610/138‑1 (MQ=255)
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GGCGATAGAGGTTGATCGTTGGTTCGTGGTTCGTGTCCATGTGCGGACAAATATCCGGATAAACGCACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAGCGCAACATATACATGTTGGCAGTTGGCCCACCAAGATCGGAAATCACGCCCGTAAAACCTGGAACGGTGTCGCGGATCGCTTCGATCTCATTAATGATCGAATCTTCGGAACGGCTCTGAATAATGCGCCCTTCGTGCTCGGTGATAGAACAGAAAGA > NC_000913/3159709‑3159976
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
