Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A3 F28 I1 R1
|
120 |
93.5 |
3664254 |
88.3% |
3235536 |
136.4 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,246,636 |
C→T |
intergenic (+114/‑16) |
exuT → / → exuR |
hexuronate transporter/DNA‑binding transcriptional repressor ExuR |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,246,636 | 0 | C | T | 100.0%
| 375.1
/ NA
| 104 | intergenic (+114/‑16) | exuT/exuR | hexuronate transporter/DNA‑binding transcriptional repressor ExuR |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (51/53); total (51/53) |
Only 100 of 109 total aligned reads displayed.
CCGCACCGCAACATTAACGTTTCGTGTAAGTTTTAGTTTCCCTTCAAAGCCGCCTTCTCAGGCGGCTTTTTCATCACTGCGAGTAGAGCTAAACTCGCAAAAGTGGTATAACAAATATAGTCTGCCGTATCATGCCTGGAGCGCATATGGAAATCACTGAACCACGCCGTTTGTATCAACAACTTGCCGCTGACCTGAAAGAGCGCATCGAACAGGGCGTCTATCTGGTGGGTGATAAACTGCCTGCAGAACGCTTTATTGCCGA > NC_000913/3246506‑3246770
|
ccgcaccgcaACATTAACGTTTCGTGTAAGTTTTAGTTTCCCTTCAAAGCCGCCTTCTCAGGCGGCTTTTTCATCACTGCGAGTAGAGCTAAACTCGCAAAAGTGGTATAACAAATATAGTCTGCCGTATTATGCCTg < 2:1455957/138‑1 (MQ=255)
ccgcaccgcaACATTAACGTTTCGTGTAAGTTTTAGTTTCCCTTCAAAGCCGCCTTCTCAGGCGGCTTTTTCATCACTGCGAGTAGAGCTAAACTCGCAAAAGTGGTATAACAAATATAGTCTGCCGTATTATGCCTg < 1:666811/138‑1 (MQ=255)
ccgcaccgcaACATTAACGTTTCGTGTAAGTTTTAGTTTCCCTTCAAAGCCGCCTTCTCAGGCGGCTTTTTCATCACTGCGAGTAGAGCTAAACTCGCAAAAGTGGTATAACAAATATAGTCTGCCGTATTATGCCTg > 2:666811/1‑138 (MQ=255)
ccgcaccgcaACATTAACGTTTCGTGTAAGTTTTAGTTTCCCTTCAAAGCCGCCTTCTCAGGCGGCTTTTTCATCACTGAGAGTAGAGCTACACTCGCAAAAGCGTGATAACAAATATAGTCTGCCGTATTATGCTTg > 2:1088634/1‑138 (MQ=255)
cgcaccgcaACATTAACGTTTCGTGTAAGTTTTAGTTTCCCTTCAAAGCCGCCTTCTCAGGCGGCTTTTTCATCACTGCGAGTAGAGCTAAACTCGCAAAAGTGGTATAACAAATATAGTCTGCCGTATTATGCCTgg < 1:1171374/138‑1 (MQ=255)
cgcaccgcaACATTAACGTTTCGTGTAAGTTTTAGTTTCCCTTCAAAGCCGCCTTCTCAGGCGGCTTTTTCATCACTGCGAGTAGAGCTAAACTCGCAAAAGTGGTATAACAAATATAGTCTGCCGTATTATGCCTgg < 1:962626/138‑1 (MQ=255)
cgcaccgcaACATTAACGTTTCGTGTAAGTTTTAGTTTCCCTTCAAAGCCGCCTTCTCAGGCGGCTTTTTCATCACTGCGAGTAGAGCTAAACTCGCAAAAGTGGTATAACAAATATAGTCTGCCGTATTATGCCTgg > 1:917178/1‑138 (MQ=255)
cgcaccgcaACATTAACGTTTCGTGTAAGTTTTAGTTTCCCTTCAAAGCCGCCTTCTCAGGCGGCTTTTTCATCACTGCGAGTAGAGCTAAACTCGCAAAAGTGGTATAACAAATATAGTCTGCCGTATTATGCCTgg < 1:548695/138‑1 (MQ=255)
cgcaccgcaACATTAACGTTTCGTGTAAGTTTTAGTTTCCCTTCAAAGCCGCCTTCTCAGGCGGCTTTTTCATCACTGCGAGTAGAGCTAAACTCGCAAAAGTGGTATAACAAATATAGTCTGCCGTATTATGCCTgg < 1:49919/138‑1 (MQ=255)
cgcaccgcaACATTAACGTTTCGTGTAAGTTTTAGTTTCCCTTCAAAGCCGCCTTCTCAGGCGGCTTTTTCATCACTGCGAGTAGAGCTAAACTCGCAAAAGTGGTATAACAAATATAGTCTGCCGTATTATGCCTgg < 1:1178727/138‑1 (MQ=255)
gcaccgcaACATTAACGTTTCGTGTAAGTTTTAGTTTCCCTTCAAAGCCGCCTTCTCAGGCGGCTTTTTCATCACTGCGAGTAGAGCTAAACTCGCAAAAGTGGTATAACAAATATAGTCTGCCGTATTATGCCTGGa > 2:346072/1‑138 (MQ=255)
caccgcaACATTAACGTTTCGTGTAAGTTTTAGTTTCCCTTCAAAGCCGCCTTCTCAGGCGGCTTTTTCATCACTGCGAGTAGAGCTAAACTCGCAAAAGTGGTATAACAAATATAGTCTGCCGTATTATGCCTgg < 1:1192418/136‑1 (MQ=255)
caccgcaACATTAACGTTTCGTGTAAGTTTTAGTTTCCCTTCAAAGCCGCCTTCTCAGGCGGCTTTTTCATCACTGCGAGTAGAGCTAAACTCGCAAAAGTGGTATAACAAATATAGTCTGCCGTATTATGCCTGGAg > 2:55141/1‑138 (MQ=255)
accgcaACATTAACGTTTCGTGTAAGTTTTAGTTTCCCTTCAAAGCCGCCTTCTCAGGCGGCTTTTTCATCACTGCGAGTAGAGCTAAACTCGCAAAAGTGGTATAACAAATATAGTCTGCCGTATTATGCCTGGAgc < 1:663905/138‑1 (MQ=255)
ccgcaACATTAACGTTTCGTGTAAGTTTTAGTTTCCCTTCAAAGCCGCCTTCTCAGGCGGCTTTTTCATCACTGCGAGTAGAGCTAAACTCGCAAAAGTGGTATAACAAATATAGTCTGCCGTATTATGCCt < 2:92153/132‑1 (MQ=255)
ccgcaACATTAACGTTTCGTGTAAGTTTTAGTTTCCCTTCAAAGCCGCCTTCTCAGGCGGCTTTTTCATCACTGCGAGTAGAGCTAAACTCGCAAAAGTGGTATAACAAATATAGTCTGCCGTATTATGCCt > 1:92153/1‑132 (MQ=255)
ccgcaACATTAACGTTTCGTGTAAGTTTTAGTTTCCCTTCAAAGCCGCCTTCTCAGGCGGCTTTTTCATCACTGCGAGTAGAGCTAAACTCGCAAAAGTGGTATAACAAATATAGTCTGCCGTATTATGCCTGGAgcg > 1:156149/1‑138 (MQ=255)
ccgcaACATTAACGTTTCGTGTAAG‑TTTAGTTTCCCTTCAAAGCCGCCTTCTCAGGCGGCTTTTTCATCACTGCGAGTAGAGCTAAACTCGCAAAAGTGGTATAACAAATATAGTCTGCCGTATTATGCCTGGAgcgc > 2:94312/1‑138 (MQ=255)
cgcaACATTAACGTTTCGTGTAAGTTTTAGTTTCCCTTCAAAGCCGCCTTCTCAGGCGGCTTTTTCATCACTGCGAGTAGAGCTAAACTCGCAAAAGTGGTATAACAAATATAGTCTGCCGTATTATGCCTGGAgcgc < 2:1746897/138‑1 (MQ=255)
gcaACATTAACGTTTCGTGTAAGTTTTAGTTTCCCTTCAAAGCCGCCTTCTCAGGCGGCTTTTTCATCACTGCGAGTAGAGCTAAACTCGCAAAAGTGGTATAACAAATATAGTCTGCCGTATTATGCCTGGAGCGCa < 2:156149/138‑1 (MQ=255)
aCATTAACGTTTCGTGTAAGTTTTAGTTTCCCTTCAAAGCCGCCTTCTCAGGCGGCTTTTTCATCACTGCGAGTAGAGCTAAACTCGCAAAAGTGGTATAACAAATATAGTCTGCCGTATTATGCCTGGAGCGCatat > 1:967900/1‑138 (MQ=255)
aCATTAACGTTTCGTGTAAGTTTTAGTTTCCCTTCAAAGCCGCCTTCTCAGGCGGCTTTTTCATCACTGCGAGTAGAGCTAAACTCGCAAAAGTGGTATAACAAATATAGTCTGCCGTATTATGCCTGGAGCGCatat > 2:841118/1‑138 (MQ=255)
aCATTAACGTTTCGTGTAAGTTTTAGTTTCCCTTCAAAGCCGCCTTCTCAGGCGGCTTTTTCATCACTGCGAGTAGAGCTAAACTCGCAAAAGTGGTATAACAAATATAGTCTGCCGTATTATGCCTGGAGCGCatat > 1:199436/1‑138 (MQ=255)
aCATTAACGTTTCGTGTAAGTTTTAGTTTCCCTTCAAAGCCGCCTTCTCAGGCGGCTTTTTCATCACTGCGAGTAGAGCT‑AACTCGCAAAAGTGGTATAACAAATATAGTCTGCCGTATTATGCCTGGAGCGCATATg < 1:1796179/138‑1 (MQ=255)
cATTAACGTTTCGTGTAAGTTTTAGTTTCCCTTCAAAGCCGCCTTCTCAGGCGGCTTTTTCATCACTGCGAGTAGAGCTAAACTCGCAAAAGTGGTATAACAAATATAGTCTGCCGTATTATGCCTGGAGCGCATATg < 1:55141/138‑1 (MQ=255)
ttAACGTTTCGTGTAAGTTTTAGTTTCCCTTCAAAGCCGCCTTCTCAGGCGGCTTTTTCATCACTGCGAGTAGAGCTAAACTCGCAAAAGTGGTATAACAAATATAGTCTGCCGTATTATGCCTGGAGCGCATATg < 1:347874/136‑1 (MQ=255)
ttAACGTTTCGTGTAAGTTTTAGTTTCCCTTCAAAGCCGCCTTCTCAGGCGGCTTTTTCATCACTGCGAGTAGAGCTAAACTCGCAAAAGTGGTATAACAAATATAGTCTGCCGTATTATGCCTGGAGCGCATATg > 2:347874/1‑136 (MQ=255)
ttCGTGTAAGTTTTAGTTTCCCTTCAAAGCCGCCTTCTCAGGCGGCTTTTTCATCACTGCGAGTAGAGCTAAACTCGCAAAAGTGGTATAACAAATATAGTCTGCCGTATTATGCCTGGAGCGCATATg > 1:123374/1‑129 (MQ=255)
ttCGTGTAAGTTTTAGTTTCCCTTCAAAGCCGCCTTCTCAGGCGGCTTTTTCATCACTGCGAGTAGAGCTAAACTCGCAAAAGTGGTATAACAAATATAGTCTGCCGTATTATGCCTGGAGCGCATATg < 2:123374/129‑1 (MQ=255)
gtgtAAGTTTTAGTTTCCCTTCAAAGCCGCCTTCTCAGGCGGCTTTTTCATCACTGCGAGTAGAGCTAAACTCGCAAAAGTGGTATAACAAATATAGTCTGCCGTATTATGCCTGGAGCGCATATGGAAATCACTGaa > 2:1625334/1‑138 (MQ=255)
tgtAAGTTTTAGTTTCCCTTCAAAGCCGCCTTCTCAGGCGGCTTTTTCATCACTGCGAGTAGAGCTAAACTCGCAAAAGTGGTATAACAAATATAGTCTGCCGTATTATGCCTGGAGCGCATATGGAAATCACTGAAc > 2:710386/1‑138 (MQ=255)
tgcaaGTTTTAGTTTCCCTTCAAAGCCGCCTTCTCAGGCGGCTTTTTCATCACTGCGAGTAGAGCTAAACTCGCAAAAGTGGTATAACAAATATAGTCTGCCGTATTATGCCTGGAGCGCATATGGAAATCACTGAAc > 2:1282947/4‑138 (MQ=255)
tAAGTTTTAGTTTCCCTTCAAAGCCGCCTTCTCAGGCGGCTTTTTCATCACTGCGAGTAGAGCTAAACTCGCAAAAGTGGTATAACAAATATAGTCTGCCGTATTATGCCTGGAGCGCATATGGAAATCACTGAACCa < 1:42190/138‑1 (MQ=255)
tAAGTTTTAGTTTCCCTTCAAAGCCGCCTTCTCAGGCGGCTTTTTCATCACTGCGAGTAGAGCTAAACTCGCAAAAGTGGTATAACAAATATAGTCTGCCGTATTATGCCTGGAGCGCATATGGAAATCACTGAACCa < 1:346072/138‑1 (MQ=255)
tAAGTTTTAGTTTCCCTTCAAAGCCGCCTTCTCAGGCGGCTTTTTCATCACTGCGAGTAGAGCTAAACTCGCAAAAGTGGTATAACAAATATAGTCTGCCGTATTATGCCTGGAGCGCATATGGAAATCACTGAACCa < 2:917178/138‑1 (MQ=255)
tAAGTTTTAGTTTCCCTTCAAAGCCGCCTTCTCAGGCGGCTTTTTCATCACTGCGAGTAGAGCTAAACTCGCAAAAGTGGTATAACAAATATAGTCTGCCGTATTATGCCTGGAGCGCATATGGAAATCACTGAACCa > 1:1657581/1‑138 (MQ=255)
ttttAGTTTCCCTTCAAAGCCGCCTTCTCAGGCTGCTTTTTCATCACTGCGAGTAGAGCTAAACTCGCAAAAGTGGTATAACAAATATAGTCTGCCGTATTATGCCTGGAGCGCATATGGAAATCACTGAACCACGcc < 2:1172366/138‑1 (MQ=255)
tttAGTTTCCCTTCAAAGCCGCCTTCTCAGGCGGCTTTTTCATCACTGCGAGTAGAGCTAAACTCGCAAAAGTGGTATAACAAATATAGTCTGCCGTATTATGCCTGGAGCGCATATGGAAATCACTGAACCACGCCg > 2:1346851/1‑138 (MQ=255)
tttAGTTTCCCTTCAAAGCCGCCTTCTCAGGCGGCTTTTTCATCACTGCGAGTAGAGCTAAACTCGCAAAAGTGGTATAACAAATATAGTCTGCCGTATTATGCCTGGAGCGCATATGGAAATCACTGAACCACGCCg < 1:1525222/138‑1 (MQ=255)
cTTCAAAGCCGCCTTCTCAGGCGGCTTTTTGATCACTGCGAGTAGAGCTAAACTCGCAAAAGTGGTATAACAAATATAGTCTGCCGTATTATGCCTGGAGCGCATATGGAAATCACTg < 1:1471156/118‑1 (MQ=255)
cTTCAAAGCCGCCTTCTCAGGCGGCTTTTTGATCACTGCGAGTAGAGCTAAACTCGCAAAAGTGGTATAACAAATATAGTCTGCCGTATTATGCCTGGAGCGCATATGGAAATCACTg > 2:1471156/1‑118 (MQ=255)
ttCAAAGCCGCCTTCTCAGGCGGCTTTTTCATCACTGCGAGTAGAGCTAAACTCGCAAAAGTGGTATAACAAATATAGTCTGCCGTATTATGCCTGGAGCGCATATGGAAATCACTGAACCACGcc > 2:130498/1‑126 (MQ=255)
ttCAAAGCCGCCTTCTCAGGCGGCTTTTTCATCACTGCGAGTAGAGCTAAACTCGCAAAAGTGGTATAACAAATATAGTCTGCCGTATTATGCCTGGAGCGCATATGGAAATCACTGAACCACGcc < 1:130498/126‑1 (MQ=255)
cgccTTCTCAGGCGGCTTTTTCATCACTGCGAGTAGAGCTAAACTCGCAAAAGTGGTATAACAAATATAGTCTGCCGTATTATGCCTGGAGCGCATATGGAAATCACTGAACCACGCCGTTTGTATCAACAACTTGcc < 1:434603/138‑1 (MQ=255)
cgccTTCTCAGGCGGCTTTTTCATCACTGCGAGTAGAGCTAAACTCGCAAAAGTGGTATAACAAATATAGTCTGCCGTATTATGCCTGGAGCGCATATGGAAATCACTGAACCACGCCGTTTGTATCAACAACTTGcc < 1:1639247/138‑1 (MQ=255)
cTTCTCAGGCGGCTTTTTCATCACTGCGAGTAGAGCTAAACTCGCAAAAGTGGTATAACAAATATAGTCTGCCGTATTATGCCTGGAGCGCATATGGAAATCACTGAACCACGCCGTTTGTATCAACAACTTGCCGCt > 1:949507/1‑138 (MQ=255)
ttCTCAGGCGGCTTTTTCATCACTGCGAGTAGAGCTAAACTCGCAAAAGTGGTATAACAAATATAGTCTGCCGTATTATGCCTGGAGCGCATATGGAAATCACTGAACCACGCCGTTTGTATCAACAACTTGCCGCTg < 1:1346851/138‑1 (MQ=255)
gcTTTTTCATCACTGCGAGTAGAGCTAAACTCGCAAAAGTGGTATAACAAATATAGTCTGCCGTATTATGCCTGGAGCGCATATGGAAATCACTGAACCACGCCGTTTGTATCAACAACTTGCCGCTGACCTGAAaga > 2:1407412/1‑138 (MQ=255)
cTTTTTCATCACTGCGAGTAGAGCTAAACTCGCAAAAGTGGTATAACAAATATAGTCTGCCGTATTATGCCTGGAGCGCATATGGAAATCACTGAACCACGCCGTTTGTATCAACAACTTGCCGCTGACCTGAAagag > 1:495794/1‑138 (MQ=255)
cTTTTTCATCACTGCGAGTAGAGCTAAACTCGCAAAAGTGGTATAACAAATATAGTCTGCCGTATTATGCCTGGAGCGCATATGGAAATCACTGAACCACGCCGTTTGTATCAACAACTTGCCGCTGACCTGAAagag > 1:615255/1‑138 (MQ=255)
ttttCATCACTGCGAGTAGAGCTAAACTCGCAAAAGTGGTATAACAAATATAGTCTGCCGTATTATGCCTGGAGCGCATATGGAAATCACTGAACCACGCCGTTTGTATCAACAACTTGCCGCTGACCTGAAaga > 1:1802600/1‑135 (MQ=255)
tttCATCACTGCGAGTAGAGCTAAACTCGCAAAAGTGGTATAACAAATATAGTCTGCCGTATTATGCCTGGAGCGCATATGGAAATCACTGAACCACGCCGTTTGTATCAACAACTTGCCGCTGACCTGAAAGAgcgc > 1:561219/1‑138 (MQ=255)
atcaCTGCGAGTAGAGCTAAACTCGCAAAAGTGGTATAACAAATATAGTCTGCCGTATTATGCCTGGAGCGCATATGGAAATCACTGAACCACGCCGTTTGTATCAACAACTTGCCGCTGACCTGAAAGAGCGCATCg > 1:1191292/1‑138 (MQ=255)
tcaCTGCGAGTAGAGCTAAACTCGCAAAAGTGGCATAACAAATATAGTCTGCCGTATTATGCCTGGAGCGCATATGGAAATCACTGAACCACGCCGTTTGTATCAACAACTTGCCGCTGACCTGAAAGAGCGCATCGa > 2:725500/1‑138 (MQ=255)
caCTGCGAGTAGAGCTAAACTCGCAAAAGTGGTATAACAAATATAGTCTGCCGTATTATGCCTGGAGCGCATATGGAAATCACTGAACCACGCCGTTTGTATCAACAACTTGCCGCTGACCTGAAAGAGCGCATCGaa < 2:1628987/138‑1 (MQ=255)
caCTGCGAGTAGAGCTAAACTCGCAAAAGTGGTATAACAAATATAGTCTGCCGTATTATGCCTGGAGCGCATATGGAAATCACTGAACCACGCCGTTTGTATCAACAACTTGCCGCTGACCTGAAAGAGCGCATCGaa < 2:1657581/138‑1 (MQ=255)
caCTGCGAGTAGAGCTAAACTCGCAAAAGTGGTATAACAAATATAGTCTGCCGTATTATGCCTGGAGCGCATATGGAAATCACTGAACCACGCCGTTTGTATCAACAACTTGCCGCTGACCTGAAAGAGCGCATCGaa < 2:949507/138‑1 (MQ=255)
aCTGCGAGTAGAGCTAAACTCGCAAAAGTGGTATAACAAATATAGTCTGCCGTATTATGCCTGGAGCGCATATGGAAATCACTGAACCACGCCGTTTGTATCAACAACTTGCCGCTGACCTGAAAGAGCGCATCGAAc < 2:949637/138‑1 (MQ=255)
tGCGAGTAGAGCTAAACTCGCAAAAGTGGTATAACAAATATAGTCTGCCGTATTATGCCTGGAGCGCATATGGAAATCACTGAACCACGCCGTTTGTATCAACAACTTGCCGCTGACCTGAAAGAGCGCATCGAACAg < 2:1191292/138‑1 (MQ=255)
tGCGAGTAGAGCTAAACTCGCAAAAGTGGTATAACAAATATAGTCTGCCGTATTATGCCTGGAGCGCATATGGAAATCACTGAACCACGCCGTTTGTATCAACAACTTGCCGCTGACCTGAAAGAGCGCATCGAACAg > 1:659622/1‑138 (MQ=255)
tGCGAGTAGAGCTAAACTCGCAAAAGTGGTATAACAAATATAGTCTGCCGTATTATGCCTGGAGCGCATATGGAAATCACTGAACCACGCCGTTTGTATCAACAACTTGCCGCTGACCTGAAAGAGCGCATCGAACAg > 2:1734239/1‑138 (MQ=255)
tGCGAGTAGAGCTAAACTCGCAAAAGTGGTATAACAAATATAGTCTGCCGTATTATGCCTGGAGCGCATATGGAAATCACTGAACCACGCCGTTTGTATCAACAACTTGCCGCTGACCTGAAAGAGCGCATCGAACAg < 2:1705030/138‑1 (MQ=255)
tGCGAGTAGAGCTAAACTCGCAAAAGTGGTATAACAAATATAGTCTGCCGTATTATGCCTGGAGCGCATATGGAAATCACTGAACCACGCCGTTTGTATCAACAACTTGCCGCTGACCTGAAAGAGCGCATCGAACAg < 1:1734239/138‑1 (MQ=255)
tGCGAGTAGAGCTAAACTCGCAAAAGTGGTATAACAAATATAGTCTGCCGTATTATGCCTGGAGCGCATATGGAAATCACTGAACCACGCCGTTTGTATCAACAACTTGCCGCTGACCTGAAAGAGCGCATCGAACAg < 1:1407412/138‑1 (MQ=255)
cGAGTAGAGCTAAACTCGCAAAAGTGGTATAACAAATATAGTCTGCCGTATTATGCCTGGAGCGCATATGGAAATCACTGAACCACGCCGTTTGTATCAACAACTTGCCGCTGACCTGAAAGAGCGCATCGAACAggg > 2:1422277/1‑138 (MQ=255)
cGAGTAGAGCTAAACTCGCAAAAGTGGTATAACAAATATAGTCTGCCGTATTATGCCTGGAGCGCATATGGAAATCACTGAACCACGCCGTTTGTATCAACAACTTGCCGCTGACCTGAAAGAGCGCATCGAACAggg < 2:615255/138‑1 (MQ=255)
cGAGTAGAGCTAAACTCGCAAAAGTGGTATAACAAATATAGTCTGCCGTATTATGCCTGGAGCGCATATGGAAATCACTGAACCACGCCGTTTGTATCAACAACTTGCCGCTGACCTGAAAGAGCGCATCGAACAggg < 2:495794/138‑1 (MQ=255)
aGTAGAGCTAAACTCGCAAAAGTGGTATAACAAATATAGTCTGCCGTATTATGCCTGGAGCGCATATGGAAATCACTGAACCACGCCGTTTGTATCAACAACTTGCCGCTGACCTGAAAGAGCGCATCg < 1:893052/129‑1 (MQ=255)
aGTAGAGCTAAACTCGCAAAAGTGGTATAACAAATATAGTCTGCCGTATTATGCCTGGAGCGCATATGGAAATCACTGAACCACGCCGTTTGTATCAACAACTTGCCGCTGACCTGAAAGAGCGCATCg > 2:893052/1‑129 (MQ=255)
aGTAGAGCTAAACTCGCAAAAGTGGTATAACAAATATAGTCTGCCGTATTATGCCTGGAGCGCATATGGAAATCACTGAACCACGCCGTTTGTATCAACAACTTGCCGCTGACCTGAAAGAGCGCATCGaa < 1:1797807/131‑1 (MQ=255)
aGTAGAGCTAAACTCGCAAAAGTGGTATAACAAATATAGTCTGCCGTATTATGCCTGGAGCGCATATGGAAATCACTGAACCACGCCGTTTGTATCAACAACTTGCCGCTGACCTGAAAGAGCGCATCGaa > 2:1797807/1‑131 (MQ=255)
aGTAGAGCTAAACTCGCAAAAGTGGTATAACAAATATAGTCTGCCGTATTATGCCTGGAGCGCATATGGAAATCACTGAACCACGCCGTTTGTATCAACAACTTGCCGCTGACCTGAAAGAGCGCATCGAACAGGGCg > 1:770314/1‑138 (MQ=255)
aGTAGAGCTAAACTCGCAAAAGTGGTATAACAAATATAGTCTGCCGTATTATGCCTGGAGCGCATATGGAAATCACTGAACCACGCCGTTTGTATCAACAACTTGCCGCTGACCTGAAAGAGCGCATCGAACAGGGCg > 2:604240/1‑138 (MQ=255)
aGTAGAGCTAAACTCGCAAAAGTGGTATAACAAATATAGGCTGCCGTATTATGCCTGGAGCGCATATGGAAATCACTGAACCACGCCGTTTGTATCAACAACTTGCCGCTGACCTGAAAGAGCGCATCGAACAGGGCg < 2:532963/138‑1 (MQ=255)
tAGAGCTAAACTCGCAAAAGTGGTATAACAAATATAGTCTGCCGTATTATGCCTGGAGCGCATATGGAAATCACTGAACCACGCCGTTTGTATCAACAACTTGCCGCTGACCTGAAAGAGCGCATCGAACAGGGCGTc > 1:903612/1‑138 (MQ=255)
gCTAAACTCGCAAAAGTGGTATAACAAATATAGTCTGCCGTATTATGCCTGGAGCGCATATGGAAATCACTGAACCACGCCGTTTGTATCAACAACTTGCCGCTGACCTGAAAGAGCGCATCGAACAGGGCGTCTATc < 2:659622/138‑1 (MQ=255)
gCTAAACTCGCAAAAGTGGTATAACAAATATAGTCTGCCGTATTATGCCTGGAGCGCATATGGAAATCACTGAACCACGCCGTTTGTATCAACAACTTGCCGCTGACCTGAAAGAGCGCATCGAACAGGGCGTCTATc < 1:977809/138‑1 (MQ=255)
tAAACTCGCAAAAGTGGTATAACAAATATAGTCTGCCGTATTATGCCTGGAGCGCATATGGAAATCACTGAACCACGCCGTTTGTATCAACAACTTGCCGCTGACCTGAAAGAGCGCATCGaa < 1:1241567/123‑1 (MQ=255)
tAAACTCGCAAAAGTGGTATAACAAATATAGTCTGCCGTATTATGCCTGGAGCGCATATGGAAATCACTGAACCACGCCGTTTGTATCAACAACTTGCCGCTGACCTGAAAGAGCGCATCGaa > 2:1241567/1‑123 (MQ=255)
tAAACTCGCAAAAGTGGTATAACAAATATAGTCTGCCGTATTATGCCTGGAGCGCATATGGAAATCACTGAACCACGCCGTTTGTATCAACAACTTGCCGCTGACCTGAAAGAGCGCATCGAACAGGGCGTCTATCtg < 2:1179157/138‑1 (MQ=255)
tAAACTCGCAAAAGTGGTATAACAAATATAGTCTGCCGTATTATGCCTAGAGCGCATATGGAAATCACTGAACCACGCCGTTTGTATCAACAACTTGCCGCTGACCTGAAAGAGCGCATCGAACAGGGCGTCTATCtg < 2:10825/138‑1 (MQ=255)
cTCGCAAAAGTGGTATAACAAATATAGTCTGCCGTATTATGCCTGGAGCGCATATGGAAATCACTGAACCACGCCGTTTGTATCAACAACTTGCCGCTGACCTGAAAGAGCGCATCGAACAgg < 2:18314/123‑1 (MQ=255)
cGCAAAAGTGGTATAACAAATATAGTCTGCCGTATTATGCCTGGAGCGCATATGGAAATCACTGAACCACGCCGTTTGTATCAACAACTTGCCGCTGACCTGAAAGAGCGCATCGAACAGGGCGTCTATCtggt > 2:648107/1‑134 (MQ=255)
cGCAAAAGTGGTATAACAAATATAGTCTGCCGTATTATGCCTGGAGCGCATATGGAAATCACTGAACCACGCCGTTTGTATCAACAACTTGCCGCTGACCTGAAAGAGCGCATCGAACAGGGCGTCTATCtggt < 1:648107/134‑1 (MQ=255)
aaaaGTGGTATAACAAATATAGTCTGCCGTATTATGCCTGGAGCGCATATGGAAATCACTGAACCACGCCGTTTGTATCAACAACTTGCCGCTGACCTGAAAGAGCGCATCGAACAGGGCGTCTATCtggt < 1:704990/131‑1 (MQ=255)
aaaaGTGGTATAACAAATATAGTCTGCCGTATTATGCCTGGAGCGCATATGGAAATCACTGAACCACGCCGTTTGTATCAACAACTTGCCGCTGACCTGAAAGAGCGCATCGAACAGGGCGTCTATCtggt > 2:704990/1‑131 (MQ=255)
aaaaGTGGTATAACAAATATAGTCTGCCGTATTATGCCTGGAGCGCATATGGAAATCACTGAACCACGCCGTTTGTATCAACAACTTGCCGCTGACCTGAAAGAGCGCATCGAACAGGGCGTCTATCTGGTGGGTGAt > 2:1310379/1‑138 (MQ=255)
aaaGTGGTATAACAAATATAGTCTGCCGTATTATGCCTGGAGCGCATATGGAAATCACTGAACCACGCCGTTTGTATCAACAACTTGCCGCTGACCTGAAAGAGCGCATCGAACAGGGCGTCTATCTGGTGGGTGATa > 2:1600185/1‑138 (MQ=255)
aaaGTGGTATAACAAATATAGTCTGCCGTATTATGCCTGGAGCGCATATGGAAATCACTGAACCACGCCGTTTGCATCAACAACTTGCCGCTGACCTGAAAGAGCGCATCGAACAGGGCGTCTATCTGGTGGGTGATa < 1:1600185/138‑1 (MQ=255)
aaTATAGTCTGCCGTATTATGCCTGGAGCGCATATGGAAATCACTGAACCACGCCGTTTGTATCAACAACTTGCCGCTGACCTGAAAGAGCGCATCGAACAGGGCGTCTATCTGGTGGGTGATAAACTGCCTGCAGaa > 2:1392438/1‑138 (MQ=255)
taGTCTGCCGTATTATGCCTGGAGCGCATATGGAAATCACTGAACCACGCCGTTTGTATCAACAACTTGCCGCTGACCTGAAAGAGCGCATCGAACAGGGCGTCTATCTGGTGGGTGATAAACTGCCTGCAGAACGCt > 1:10409/1‑138 (MQ=255)
aGTCTGCCGTATTATGCCTGGAGCGCATATGGAAATCACTGAACCACGCCGTTTGTATCAACAACTTGCCGCTGACCTGAAAGAGCGCATCGAACAGGGCGTCTATCTGGTGGGTGATAAACTGCCTGCAg > 2:1788195/1‑131 (MQ=255)
aGTCTGCCGTATTATGCCTGGAGCGCATATGGAAATCACTGAACCACGCCGTTTGTATCAACAACTTGCCGCTGACCTGAAAGAGCGCATCGAACAGGGCGTCTATCTGGTGGGTGATAAACTGCCTGCAg < 1:1788195/131‑1 (MQ=255)
aGTCTGCCGTATTATGCCTGGAGCGCATATGGAAATCACTGAACCACGCCGTTTGTATCAACAACTTGCCGCTGACCTGAAAGAGCGCATCGAACAGGGCGTCTATCTGGTGGGTGATAAACTGCCTGCAGAACGCtt > 2:1725915/1‑138 (MQ=255)
aGTCTGCCGTATTATGCCTGGAGCGCATATGGAAATCACTGAACCACGCCGTTTGTATCAACAACTTGCCGCTGACCTGAAAGAGCGCATCGAACAGGGCGTCTATCTGGTGGGTGATAAACTGCCTGCAGAACGCtt > 1:1673617/1‑138 (MQ=255)
tGCCGTATTATGCCTGGAGCGCATATGGAAATCACTGAACCACGCCGTTTGTATCAACAACTTGCCGCTGACCTGAAAGAGCGCATCGAACAGGGCGTCTATCTGGTGGGTGATAAACTGCCTGCAGAACGCTTTAtt > 2:715418/1‑138 (MQ=255)
tGCCGTATTATGCCTGGAGCGCATATGGAAATCACTGAACCACGCCGTTTGTATCAACAACTTGCCGCTGACCTGAAAGAGCGCATCGAACAGGGCGTCTATCTGGTGGGTGATAAACTGCCTGCAGAACGCTTTAtt > 2:1021949/1‑138 (MQ=255)
ccGTATTATGCCTGGAGCGCATATGGAAATCACTGAACCACGCCGTTTGTATCAACAACTTGCCGCTGACCTGAAAGAGCGCATCGAACAGGGCGTCTATCTGGCGGGTGATAAACTGCCTGCAGAACGCTTTATTGc > 2:1034193/1‑138 (MQ=255)
gTATTATGCCTGGAGCGCATATGGAAATCACTGAACCACGCCGTTTGTATCAACAACTTGCCGCTGACCTGAAAGAGCGCATCGAACAGGGCGTCTATCTGGTGGGTGATAAACTGCCTGCAGAACGCTTTATTGCCg > 1:918561/1‑138 (MQ=255)
tattatGCCTGGAGCGCATATGGAAATCACTGAACCACGCCGTTTGTATCAACAACTTGCCGCTGACCTGAAAGAGCGCATCGAACAGGGCGTCTATCTGGTGGGTGATAAACTGCCTGCAGAACGCTTTATTGCCGa < 1:1310379/138‑1 (MQ=255)
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CCGCACCGCAACATTAACGTTTCGTGTAAGTTTTAGTTTCCCTTCAAAGCCGCCTTCTCAGGCGGCTTTTTCATCACTGCGAGTAGAGCTAAACTCGCAAAAGTGGTATAACAAATATAGTCTGCCGTATCATGCCTGGAGCGCATATGGAAATCACTGAACCACGCCGTTTGTATCAACAACTTGCCGCTGACCTGAAAGAGCGCATCGAACAGGGCGTCTATCTGGTGGGTGATAAACTGCCTGCAGAACGCTTTATTGCCGA > NC_000913/3246506‑3246770
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
