Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A3 F28 I1 R1
|
120 |
93.5 |
3664254 |
88.3% |
3235536 |
136.4 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,474,817 |
(G)5→4 |
coding (149/288 nt) |
tusB ← |
sulfurtransferase complex subunit TusB |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,474,813 | 0 | G | . | 99.1%
| 503.7
/ ‑2.3
| 116 | coding (153/288 nt) | tusB | sulfurtransferase complex subunit TusB |
| Reads supporting (aligned to +/- strand): ref base G (1/0); new base . (59/56); total (60/56) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.04e-01 |
Only 100 of 119 total aligned reads displayed.
CATCACCAGGCCATCTGGCTGGGGTGCTTAACCGTAAGTCTGACGAAATCAGTATAGTCAATGAGAATGATGTCGTTCGAAATTTGACCAGTCAAACCGCGGGCAATAAGGTCTTCGTTCAGGGCATAGACCTTAATGGGGGCATTACGCAGACTTTCAAGGTAGCGGTTACCGTCAACTGCGGCAGTTACGCCATCTTGCAATAATAGCAGTTCGTCTCCTTCACTGAGCAGACGCAGCAGCGCAGCAAAATCCGTCAGCCAGGGTGAG > NC_000913/3474676‑3474945
|
aCCAGGCCATCTGGCTGGGGTGCTTAACCGTAAGTCTGACGAAATCAGTATAGTCAATGAGAATGATGTCGTTCGAAATTTGACCAGTCAAACCGCGGGCAATAAGGTCTTCGTTCAGGGCATAGACCTTAATggggc > 1:1067704/1‑137 (MQ=255)
cATCTGGCTGGGGTGCTTAACCGTAAGTCTGACGAAATCAGTATAGTCAATGAGAATGATGTCGTTCGAAATTTGACCAGTCAAACCGCGGGCAATAAGGTCTTCGTTCAGGGCATAGACCTTAAT‑GGGGCATTACGc < 1:535168/138‑1 (MQ=255)
cATCTGGCTGGGGTGCTTAACCGTAAGTCTGACGAAATCAGTATAGTCAATGAGAATGATGTCGTTCGAAATTTGACCAGTCAAACCGCGGGCAATAAGGTCTTCGTTCAGGGCATAGACCTTAAT‑GGGGCATTACGc > 2:1103917/1‑138 (MQ=255)
aTCTGGCTGGGGTGCTTAACCGTAAGTCTGACGAAATCAGTATAGTCAATGAGAATGATGTCGTTCGAAATTTGACCAGTCAAACCGCGGGCAATAAGGTCTTCGTTCAGGGCATAGACCTTAAT‑GGGGCATTACGCa > 1:754202/1‑138 (MQ=255)
tggctggGGTGCTTAACCGTAAGTCTGACGAAATCAGTATAGTCAATGAGAATGATGTCGTTCGAAATTTGACCAGTCAAACCGCGGGCAATAAGGTCTTCGTTCAGGGCATAGACCTTAAT‑GGGGCATTACGCAGAc > 2:389454/1‑138 (MQ=255)
tggctggGGTGCTTAACCGTAAGTCTGACGAAATCAGTATAGTCAATGAGAATGATGTCGTTCGAAATTTGACCAGTCAAACCGCGGGCAATAAGGTCTTCGTTCAGGGCATAGACCTTAAT‑GGGGCATTACGCAGAc > 1:1294909/1‑138 (MQ=255)
ggctggGGTGCTTAACCGTAAGTCTGACGAAATCAGTATAGTCAATGAGAATGATGTCGTTCGAAATTTGACCAGTCAAACCGCGGGCAATAAGGTCTTCGTTCAGGGCATAGACCTTAAT‑GGGGCATTACGCAGACt > 1:774491/1‑138 (MQ=255)
cTTAACCGTAAGTCTGACGAAATCAGTATAGTCAATGAGAATCATGTCGTTCGAAATTTGACCAGTCAAACCGCGGGCAATAAGGTCTTCGTTCAGGGCATAGACCTTAAT‑GGGGCATTACGCAGACTTTCAAGGTAg > 1:933065/1‑138 (MQ=255)
ttAACCGTAAGTCTGACGAAATCAGTATAGTCGATGAGAATGATGTCGTTCGAAATTTGACCAGTCAAACCGCGGGCAATAAGGTCTTCGTTCAGGGCATAGACCTTAAT‑GGGGCATTACGCAGACTTTCAAGGTAGc < 1:1047193/138‑1 (MQ=255)
ttAACCGTAAGTCTGACGAAATCAGTATAGTCAATGAGAATGATGTCGTTCGAAATTTGACCAGTCAAACCGCGGGCAATAAGGTCTTCGTTCAGGGCATAGACCTTAAT‑GGGGCATTACg > 1:766484/1‑121 (MQ=255)
aaCCGTAAGTCTGACGAAATCAGTATAGTCAATGAGAATGATGTCGTTCGAAATTTGACCAGTCAAACCGCGGGCAATAAGGTCTTCGTTCAGGGCATAGACCTTAAT‑GGGGCATTACGCAGACTTTCAAGGTAGCgg > 1:1042076/1‑138 (MQ=255)
aGTCTGACGAAATCAGTATAGTCAATGAGAATGATGTCGTTCGAAATTTGACCAGTCAAACCGCGGGCAATAAGGTCTTCGTTCAGGGCATAGACCTTAAT‑GGGGCATTACGCAGACTTTCAAGGTAGCGGTTACCGt < 1:564443/138‑1 (MQ=255)
tCTGACGAAATCAGTATAGTCAATGAGAATGATGTCGTTCGAAATTTGACCAGTCAAACCGCGGGCAATAAGGTCTTCGTTCAGGGCATAGACCTTAAT‑GGGGCATTACGCAGACTTTCAAGGTAGCGGTTACCGTCa > 1:382913/1‑138 (MQ=255)
cTGACGAAATCAGTATAGTCAATGAGAATGATGTCGTTCGAAATTTGACCAGTCAAACCGCGGGCAATAAGGTCTTCGTTCAGGGCATAGACCTTAAT‑GGGGCATTACGCAGACTTTCAAGGTAGCGGTTa < 2:535012/131‑1 (MQ=255)
gACGAAATCAGTATAGTCAATGAGAATGATGTCGTTCGAAATTTGACCAGTCAAACCGCGGGCAATAAGGTCTTCGTTCAGGGCATAGACCTTAAT‑GGGGCATTACGCAGACTTTCAAGGTAGCGGTTACCGTCAACt < 2:652485/138‑1 (MQ=255)
cGAAATCAGTATAGTCAATGAGAATGATGTCGTTCGAAATTTGACCAGTCAAACCGCGGGCAATAAGGTCTTCGTTCAGGGCATAGACCTTAATGGGGGCATTACGCAGACTTTCAAGGTAGCGGTTACCGTCAACTg > 1:1621991/1‑138 (MQ=255)
aGTATAGTCAATGAGAATGATGTCGTTCGAAATTTGACCAGTCAAACCGCGGGCAATAAGGTCTTCGTTCAGGGCATAGACCTTAAT‑GGGGCATTACGCAGACTTTCAAGGTAGTGGTTACCGTCAACTGCGGCAGtt > 1:585225/1‑138 (MQ=255)
aGTATAGTCAATGAGAATGATGTCGTTCGAAATTTGACCAGTCAAACCGCGGGCAATAAGGTCTTCGTTCAGGGCATAGACCTTAAT‑GGGGCATTACGCAGACTTTCAAGGTAGCGGTTACCGTCAACTGCGGCAGtt > 2:1022284/1‑138 (MQ=255)
aGTATAGTCAATGAGAATGATGTCGTTCGAAATTTGACCAGTCAAACCGCGGGCAATAAGGTCTTCGTTCAGGGCATAGACCTTAAT‑GGGGCATTACGCAGACTTTCAAGGTAGCGGTTACCGTCAACTGCGGCAGtt > 2:1531430/1‑138 (MQ=255)
gTATAGTCAATGAGAATGATGTCGTTCGAAATTTGACCAGTCAAACCGCGGGCAATAAGGTCTTCGTTCAGGGCATAGACCTTAAT‑GGGGCATTACGCAGACTTTCAAGGTAGCGGTTACCGTCAACTGCGGCAGTTa < 2:1280633/138‑1 (MQ=255)
gTATAGTCAATGAGAATGATGTCGTTCGAAATTTGACCAGTCAAACCGCGGGCAATAAGGTCTTCGTTCAGGGCATAGACCTTAAT‑GGGGCATTACGCAGACTTTCAAGGTAGCGGTTACCGTCAACTGCGGCAGTTa < 2:1391250/138‑1 (MQ=255)
gTATAGTCAATGAGAATGATGTCGTTCGAAATTTGACCAGTCAAACCGCGGGCAATAAGGTCTTCGTTCAGGGCATAGACCTTAAT‑GGGGCATTACGCAGACTTTCAAGGTAGCGGTTACCGTCAACTGCGGCAGTTa < 1:1531430/138‑1 (MQ=255)
ataGTCAATGAGAATGATGTCGTTCGAAATTTGACCAGTCAAACCGCGGGCAATAAGGTCTTCGTTCAGGGCATAGACCTTAAT‑GGGGCATTACGCAGACTTTCAAGGTAGCGGTTACCGTCAACTGCGGCAGTTACg < 1:578861/138‑1 (MQ=255)
taGTCAATGAGAATGATGTCGTTCGAAATTTGACCAGTCAAACCGCGGGCAATAAGGTCTTCGTTCAGGGCATAGACCTTAAT‑GGGGCATTACGCAGACTTTCAAGGTAGCGGTTACCGTCAACTGCGGCAGTTACGc > 2:1007749/1‑138 (MQ=255)
cAATGAGAATGATGTCGTTCGAAATTTGACCAGTCAAACCGCGGGCAATAAGGTCTTCGTTCAGGGCATAGACCTTAAT‑GGGGCATTACGCAGACTTTCAAGGTAGCGGTTACCGTCAACTGCGGCAGTTACGCCATc < 1:329970/138‑1 (MQ=255)
cAATGAGAATGATGTCGTTCGAAATTTGACCAGTCAAACCGCGGGCAATAAGGTCTTCGTTCAGGGCATAGACCTTAAT‑GGGGCATTACGCAGACTTTCAAGGTAGCGGTTACCGTCAACTGCGGCAGTTACGCCATc < 2:382913/138‑1 (MQ=255)
aaTGAGAATGATGTCGTTCGAAATTTGACCAGTCAAACCGCGGGCAATAAGGTCTTCGTTCAGGGCATAGACCTTAAT‑GGGGCATTACGCAGACTTTCAAGGTAGCGGTTACCGTCAACTGCGGCAGTTACGCCATCt > 1:812200/1‑138 (MQ=255)
aTGAGAATGATGTCGTTCGAAATTTGACCAGTCAAACCGCGGGCAATAAGGTCTTCGTTCAGGGCATAGACCTTAAT‑GGGGCATTACGCAGACTTTCAAGGTAGCGGTTACCGTCAACTGCGGCAGTTACGCCATCtt < 2:1074314/138‑1 (MQ=255)
aTGAGAATGATGTCGTTCGAAATTTGACCAGTCAAACCGCGGGCAATAAGGTCTTCGTTCAGGGCATAGACCTTAAT‑GGGGCATTACGCAGACTTTCAAGGTAGCGGTTACCGTCAACTGCGGCAGTTACGCCATCtt < 1:90249/138‑1 (MQ=255)
aTGAGAATGATGTCGTTCGAAATTTGACCAGTCAAACCGCGGGCAATAAGGTCTTCGTTCAGGGCATAGACCTTAAT‑GGGGCATTACGCAGACTTTCAAGGTAGCGGTTACCGTCAACTGCGGCAGTTACGCCATCtt > 1:1331649/1‑138 (MQ=255)
aTGAGAATGATGTCGTTCGAAATTTGACCAGTCAAACCGCGGGCAATAAGGTCTTCGTTCAGGGCATAGACCTTAAT‑GGGGCATTACGCAGACTTTCAAGGTAGCGGTTACCGTCAACTGCGGCAGTTACGCCATCtt < 1:389454/138‑1 (MQ=255)
aTGAGAATGATGTCGTTCGAAATTTGACCAGTCAAACCGCGGGCAATAAGGTCTTCGTTCAGGGCATAGACCTTAAT‑GGGGCATTACGCAGACTTTCAAGGTAGCGGTTACCGTCAACTGCGGCAGTTACGCCATCtt < 2:155203/138‑1 (MQ=255)
tGAGAATGATGTCGTTCGAAATTTGACCAGTCAAACCGCGGGCAATAAGGTCTTCGTTCAGGGCATAGACCTTAAT‑GGGGCATTACGCAGACTTTCAAGGTAGCGGTTACCGTCAACTGCGGCAGTTa > 1:670177/1‑128 (MQ=255)
tGAGAATGATGTCGTTCGAAATTTGACCAGTCAAACCGCGGGCAATAAGGTCTTCGTTCAGGGCATAGACCTTAAT‑GGGGCATTACGCAGACTTTCAAGGTAGCGGTTACCGTCAACTGCGGCAGTTa < 2:670177/128‑1 (MQ=255)
gagaATGATGTCGTTCGAAATTTGACCAGTCAAACCGCGGGCAATAAGGTCTTCGTTCAGGGCATAGACCTTAAT‑GGGGCATTACGCAGACTTTCAAGGTAGCGGTTACCGTCAACTGCGGCAGTTACGCCATCTTGc > 1:393830/1‑138 (MQ=255)
gagaATGATGTCGTTCGAAATTTGACCAGTCAAACCGCGGGCAATAAGGTCTTCGTTCAGGGCATAGACCTTAAT‑GGGGCATTACGCAGACTTTCAAGGTAGCGGTTACCGTCAACTGCGGCAGTTACGCCATCTTGc > 2:711900/1‑138 (MQ=255)
gagaATGATGTCGTTCGAAATTTGACCAGTCAAACCGCGGGCAATAAGGTCCTCGTTCAGGGCATAGACCTTAAT‑GGGGCATTACGCAGACTTTCAAGGTAGCGGTTACCGTCAACTGCGGCAGTTACGCCATCTTGc < 2:1803791/138‑1 (MQ=255)
agaATGATGTCGTTCGAAATTTGACCAGTCAANCTGCGGGCAATAAGGTCTTCGTTCAGGGCATAGACCTTAAT‑GGGGCATTACGCAGACTTTCAAGGTAGCGGTTACCGTCAACTGCGGCAGTTACGCCATCTTGCa > 1:362710/1‑138 (MQ=255)
gaATGATGTCGTTCGAAATTTGACCAGTCAAACCGCGGGCAATAAGGTCTTCGTTCAGGGCATAGACCTTAAT‑GGGGCATTACGCAGACTTTCAAGGTAGCGGTTACCGTCAACTGCGGCAGTTACGCCATCTTGc < 1:1792600/136‑1 (MQ=255)
gaATGATGTCGTTCGAAATTTGACCAGTCAAACCGCGGGCAATAAGGTCTTCGTTCAGGGCATAGACCTTAAT‑GGGGCATTACGCAGACTTTCAAGGTAGCGGTTACCGTCAACTGCGGCAGTTACGCCATCTTGc > 2:1792600/1‑136 (MQ=255)
gaATGATGTCGTTCGAAATTTGACCAGTCAAACCGCGGGCAATAAGGTCTTCGTTCAGGGCATAGACCTTAAT‑GGGGCATTACGCAGACTTTCAAGGTAGCGGTTACCGTCAACTGCGGCAGTTACGCCATCTTGCaa > 1:117914/1‑138 (MQ=255)
gaATGATGTCGTTCGAAATTTGACCAGTCAAACCGCGGGCAATAAGGTCTTCGTTCAGGGCATAGACCTTAAT‑GGGGCATTACGCAGACTTTCAAGGTAGCGGTTACCGTCAACTGCGGCAGTTACGCCATCTTGCaa > 2:765000/1‑138 (MQ=255)
gaATGATGTCGTTCGAAATTTGACCAGTCAAACCGCGGGCAATAAGGTCTTCGTTCAGGGCATAGACCTTAAT‑GGGGCATTACGCAGACTTTCAAGGTAGCGGTTACCGTCAACTGCGGCAGTTACGCCATCTTGCaa > 1:74054/1‑138 (MQ=255)
gaATGATGTCGTTCGAAATTTGACCAGTCAAACCGCGGGCAATAAGGTCTTCGTTCAGGGCATAGACCTTAAT‑GGGGCATTACGCAGACTTTCAAGGTAGCGGTTACCGTCAACTGCGGCAGTTACGCCATCTTGCaa > 1:887680/1‑138 (MQ=255)
atgatgTCGTTCGAAATTTGACCAGTCAAACCGCGGGCAATAAGGTCTTCGTTCAGGGCATAGACCTTAAT‑GGGGCATTACGCAGACTTTCAAGGTAGCGGTTACCGTCAACTGCGGCAGTTACGCCATCTTGCaata < 2:754202/138‑1 (MQ=255)
gatgTCGTTCGAAATTTGACCAGTCAAACCGCGGGCAATAAGGTCTTCGTTCAGGGCATAGACCTTAAT‑GGGGCATTACGCAGACTTTCAAGGTAGCGGTTACCGTCAACTGCGGCAGTTACGCCATCTTGCaataat < 1:275835/138‑1 (MQ=255)
atgTCGTTCGAAATTTGACCAGTCAAACCGCGGGCAATAAGGTCTTCGTTCAGGGCATAGACCTTAAT‑GGGGCATTACGCAGACTTTCAAGGTAGCGGTTACCGTCAACTGCGGCAGTTAc > 1:1037664/1‑121 (MQ=255)
atgTCGTTCGAAATTTGACCAGTCAAACCGCGGGCAATAAGGTCTTCGTTCAGGGCATAGACCTTAAT‑GGGGCATTACGCAGACTTTCAAGGTAGCGGTTACCGTCAACTGCGGCAGTTAc < 2:1037664/121‑1 (MQ=255)
atgTCGTTCGAAATTTGACCAGTCAAACCGCGGGCAATAAGGTCTTCGTTCAGGGCATAGACCTTAAT‑GGGGCATTACGCAGACTTTCAAGGTAGCGGTTACCGTCAACTGCGGCAGTTACGcc > 2:529852/1‑124 (MQ=255)
atgTCGTTCGAAATTTGACCAGTCAAACCGCGGGCAATAAGGTCTTCGTTCAGGGCATAGACCTTAAT‑GGGGCATTACGCAGACTTTCAAGGTAGCGGTTACCGTCAACTGCGGCAGTTACGcc < 1:529852/124‑1 (MQ=255)
atgTCGTTCGAAATTTGACCAGTCAAACCGCGGGCAATAAGGTCTTCGTTCAGGGCATAGACCTTAAT‑GGGGCATTACGCAGACTTTCAAGGTAGCGGTTACCGTCAACTGCGGCAGTTACGCCATCTTGCAataata > 2:1149489/1‑138 (MQ=255)
atgTCGTTCGAAATTTGACCAGTCAAACCGCGGGCAATAAGGTCTTCGTTCAGGGCATAGACCTTAAT‑GGGGCATTACGCAGACTTTCAAGGTAGCGGTTACCGTCAACTGCGGCAGTTACGCCATCTTGCAataata < 1:98242/138‑1 (MQ=255)
atgTCGTTCGAAATTTGACCAGTCAAACCGCGGGCAATAAGGTCTTCGTTCAGGGCATAGACCTTAAT‑GGGGCATTACGCAGACTTTCAAGGTAGCGGTTACCGTCAACTGCGGCAGTTACGCCATCTTGCAataata > 2:685691/1‑138 (MQ=255)
atgTCGTTCGAAATTTGACCAGTCAAACCGCGGGCAATAAGGTCTTCGTTCAGGGCATAGACCTTAAT‑GGGGCATTACGCAGACTTTCAAGGTAGCGGTTACCGTCAACTGCGGCAGTTACGCCATCTTGCAataata > 2:1320035/1‑138 (MQ=255)
gTCGTTCGAAATTTGACCAGTCAAACCGCGGGCAATAAGGTCTTCGTTCAGGGCATAGACCTTAAT‑GGGGCATTACGCAGACTTTCAAGGTAGCGGTTACCGTCAACTGCGGCAGTTACGCCATCTTGCAATAATAGc < 1:1007749/138‑1 (MQ=255)
gTCGTTCGAAATTTGACCAGTCAAACCGCGGGCAATAAGGTCTTCGTTCAGGGCATAGACCTTAAT‑GGGGCATTACGCAGACTTTCAAGGTAGCGGTTACCGTCAACTGCGGCAGTTACGCCATCTTGCAATAATAGc > 1:120145/1‑138 (MQ=255)
gTCGTTCGAAATTTGACCAGTCAAACCGCGGGCAATAAGGTCTTCGTTCAGGGCATAGACCTTAAT‑GGGGCATTACGCAGACTTTCAAGGTAGCGGTTACCGTCAACTGCGGCAGTTACGCCATCTTGCAATAATAGc > 1:1720636/1‑138 (MQ=255)
tCGTTCGAAATTTGACCAGTCAAACCGCGGGCAATAAGGTCTTCGTTCAGGGCATAGACCTTAAT‑GGGGCATTACGCAGACTTTCAAGGTAGCGGTTACCGTCAACTGCGGCAGTTACGCCATCTTGCAATAATAGCa > 1:1747243/1‑138 (MQ=255)
gTTCGAAATTTGACCAGTCAAACCGCGGGCAATAAGGTCTTCGTTCAGGGCATAGACCTTAAT‑GGGGCATTACGCAGACTTTCAAGGTAGCGGTTACCGTCAACTGCGGCAGTTACGCCATCTTGCAATAATAGCAGt < 1:876855/138‑1 (MQ=255)
cGAAATTTGACCAGTCAAACCGCGGGCAATAAGGTCTTCGTTCAGGGCATAGACCTTAAT‑GGGGCATTACGCAGACTTTCAAGGTAGCGGTTACCGTCAACTGCGGCAGTTACGCCATCTTGCAATAATAGCAGTTCg > 1:220142/1‑138 (MQ=255)
cGAAATTTGACCAGTCAAACCGCGGGCAATAAGGTCTTCGTTCAGGGCATAGACCTTAAT‑GGGGCATTACGCAGACTTTCAAGGTAGCGGTTACCGTCAACTGCGGCAGTTACGCCATCTTGCAATAATAGCAGTTCg > 2:611112/1‑138 (MQ=255)
aaaTTTGACCAGTCAAACCGCGGGCAATAAGGTCTTCGTTCAGGGCATAGACCTTAAT‑GGGGCATTACGCAGACTTTCAAGGTAGCGGTTACCGTCAACTGCGGCAGTTACGCCATCTTGCAATAATAGCAGTTCGtc > 1:30490/1‑138 (MQ=255)
aTTTGACCAGTCAAACCGCGGGCAATAAGGTCTTCGTTCAGGGCATAGACCTTAAT‑GGGGCATTACGCAGACTTTCAAGGTAGCGGTTACCGTCAACTGCGGCAGTTACGCCATCTTGCAATAATAGCAGTTCGtctc > 1:1454088/1‑138 (MQ=255)
aTTTGACCAGTCAAACCGCGGGCAATAAGGTCTTCGTTCAGGGCATAGACCTTAAT‑GGGGCATTACGCAGACTTTCAAGGTAGCGGTTACCGTCAACTGCGGCAGTTACGCCATCTTGCAATAATAGCAGTTCGtctc < 1:1704575/138‑1 (MQ=255)
ttGACCAGTCAAACCGCGGGCAATAAGGTCTTCGTTCAGGGCATAGACCTTAAT‑GGGGCATTACGCAGACTTTCAAGGTAGCGGTTACCGTCAACTGCGGCAGTTACGCCATCTTGCAATAATAGCAGTTCGTCTCCt < 2:1797066/138‑1 (MQ=255)
cAAACCGCGGGCAATAAGGTCTTCGTTCAGGGCATAGACCTTAAT‑GGGGCATTACGCAGACTTTCAAGGTAGCGGTTACCGTCAACTGCGGCAGTTACGCCATCTTGCAATAATAGCAGTTCGTCTCCTTCACTGAGc > 2:1341734/1‑138 (MQ=255)
aaaCCGCGGGCAATAAGGTCTTCGTTCAGGGCATAGACCTTAAT‑GGGGCATTACGCAGACTTTCAAGGTAGCGGTTACCGTCAACTGCGGCAGTTACGCCATCTTGCAATAATAGCAGTTCGTCTCCTTCACTGAGCa < 2:320705/138‑1 (MQ=255)
gCAATAAGGTCTTCGTTCAGGGCATAGACCTTAAT‑GGGGCATTACGCAGACTTTCAAGGTAGCGGTTACCGTCAACTGCGGCAGTTACGCCATCTTGCAATAATAGCAGTTCGTCTCCTTCACTGAGCAGACgcagca < 1:1022284/138‑1 (MQ=255)
cAATAAGGTCTTCGTTCAGGGCATAGACCTTAAT‑GGGGCATTACGCAGACTTTCAAGGTAGCGGTTACCGTCAACTGCGGCAGTTACGCCATCTTGCAATAATAGCAGTTCGTCTCCTTCACTGAg > 2:627931/1‑126 (MQ=255)
cAATAAGGTCTTCGTTCAGGGCATAGACCTTAAT‑GGGGCATTACGCAGACTTTCAAGGTAGCGGTTACCGTCAACTGCGGCAGTTACGCCATCTTGCAATAATAGCAGTTCGTCTCCTTCACTGAg < 1:627931/126‑1 (MQ=255)
cAATAAGGTCTTCGTTCAGGGCATAGACCTTAAT‑GGGGCATTACGCAGACTTTCAAGGTAGCGGTTACCGTCAACTGCGGCAGTTACGCCATCTTGCAATAATAGCAGTTCGTCTCCTTCACTGAGTAGACGcagcag > 2:1001161/1‑138 (MQ=255)
cAATAAGGTCTTCGTTCAGGGCATAGACCTTAAT‑GGGGCATTACGCAGACTTTCAAGGTAGCGGTTACCGTCAACTGCGGCAGTTACGCCATCTTGCAATAATAGCAGTTCGTCTCCTTCACTGAGCAGAc > 2:1442178/1‑131 (MQ=255)
cAATAAGGTCTTCGTTCAGGGCATAGACCTTAAT‑GGGGCATTACGCAGACTTTCAAGGTAGCGGTTACCGTCAACTGCGGCAGTTACGCCATCTTGCAATAATAGCAGTTCGTCTCCTTCACTGAGCAGAc < 1:1442178/131‑1 (MQ=255)
cAATAAGGTCTTCGTTCAGGGCATAGACCTTAAT‑GGGGCATTACGCAGACTTTCAAGGTAGCGGTTACCGTCAACTGCGGCAGTTACGCCATCTTGCAATAATAGCAGTTCGTCTCCTTCACTGAGCAGACgcagca > 1:685906/1‑137 (MQ=255)
cAATAAGGTCTTCGTTCAGGGCATAGACCTTAAT‑GGGGCATTACGCAGACTTTCAAGGTAGCGGTTACCGTCAACTGCGGCAGTTACGCCATCTTGCAATAATAGCAGTTCGTCTCCTTCACTGAGCAGACGcagcag > 1:917969/1‑138 (MQ=255)
cAATAAGGTCTTCGTTCAGGGCATAGACCTTAAT‑GGGGCATTACGCAGACTTTCAAGGTAGCGGTTACCGTCAACTGCGGCAGTTACGCCATCTTGCAATAATAGCAGTTCGTCTCCTTCACTGAGCAGACGcagcag < 1:711900/138‑1 (MQ=255)
cAATAAGGTCTTCGTTCAGGGCATAGACCTTAAT‑GGGGCATTACGCAGACTTTCAAGGTAGCGGTTACCGTCAACTGCGGCAGTTACGCCATCTTGCAATAATAGCAGTTCGTCTCCTTCACTGAGCAGACGcagcag > 2:852203/1‑138 (MQ=255)
tCGTTCAGGGCATAGACCTTAAT‑GGGGCATTACGCAGACTTTCAAGGTAGCGGTTACCGTCAACTGCGGCAGTTACGCCATCTTGCAATAATAGCAGTTCGTCTCCTTCACTGAGCAGACGCAGCAGCGCAGCAAAAt < 2:1720636/138‑1 (MQ=255)
tCGTTCAGGGCATAGACCTTAAT‑GGGGCATTACGCAGACTTTCAAGGTAGCGGTTACCGTCAACTGCGGCAGTTACGCCATCTTGCAATAATAGCAGTTCGTCTCCTTCACTGAGCAGACGCAGCAGCGCAGCAAAAt < 2:1067704/138‑1 (MQ=255)
tCGTTCAGGGCATAGACCTTAAT‑GGGGCATTACGCAGACTTTCAAGGTAGCGGTTACCGTCAACTGCGGCAGTTACGCCATCTTGCAATAATAGCAGTTCGTCTCCTTCACTGAGCAGACGCAGCAGCGCAGCAAAAt > 2:713041/1‑138 (MQ=255)
tCGTTCAGGGCATAGACCTTAAT‑GGGGCATTACGCAGACTTTCAAGGTAGCGGTTACCGTCAACTGCGGCAGTTACGCCATCTTGCAATAATAGCAGTTCGTCTCCTTCACTGAGCAGACGCAGCAGCGCAGCAAAAt > 1:1124750/1‑138 (MQ=255)
tCGTTCAGGGCATAGACCTTAAT‑GGGGCATTACGCAGACTTTCAAGGTAGCGGTTACCGTCAACTGCGGCAGTTACGCCATCTTGCAATAATAGCAGTTCGTCTCCTTCACTGAGCAGACGCAGCAGCGCAGCAAAAt < 1:1514975/138‑1 (MQ=255)
ggCATAGACCTTAAT‑GGGGCATTACGCAGACTTTCAAGGTAGCGGTTACCGTCAACTGCGGCAGTTACGCCATCTTGCAATAATAGCAGTTCGTCTCCTTCACTGAGCAGACGCAGCAGCGCAGCAAAATCCGTCAGc > 2:1354164/1‑138 (MQ=255)
ggCATAGACCTTAAT‑GGGGCATTACGCAGACTTTCAAGGTAGCGGTTACCGTCAACTGCGGCAGTTACGCCATCTTGCAATAATAGCAGTTCGTCTCCTTCACTGAGCAGACGCAGCAGCGCAGCAAAATCCGTCAGc > 1:4594/1‑138 (MQ=255)
ggCATAGACCTTAAT‑GGGGCATTACGCAGACTTTCAAGGTAGCGGTTACCGTCAACTGCGGCAGTTACGCCATCTTGCAATAATAGCAGTTCGTCTCCTTCACTGAGCAGACGCAGCAGCGCAGCAAAATCCGTCAGc > 2:1596379/1‑138 (MQ=255)
gCATAGACCTTAAT‑GGGGCATTACGCAGACTTTCAAGGTAGCGGTTACCGTCAACTGCGGCAGTTACGCCATCTTGCAATAATAGCAGTTCGTCTCCTTCACTGAGCAGACGCAGCAGCGCAGCAAAATCCGTCAGcc > 1:1728035/1‑138 (MQ=255)
cATAGACCTTAAT‑GGGGCATTACGCAGACTTTCAAGGTAGCGGTTACCGTCAACTGCGGCAGTTACGCCATCTTGCAATAATAGCAGTTCGTCTCCTTCACTGAGCAGACGCAGCAGCGCAGCAAAATCCGTCAGCCa < 2:774491/138‑1 (MQ=255)
cATAGACCTTAAT‑GGGGCATTACGCAGACTTTCAAGGTAGCGGTTACCGTCAACTGCGGCAGTTACGCCATCTTGCAATAATAGCAGTTCGTCTCCTTCACTGAGCAGACGCAGCAGCGCAGCAAAATCCGTCAGCCa < 2:925680/138‑1 (MQ=255)
cATAGACCTTAAT‑GGGGCATTACGCAGACTTTCAAGGTAGCGGTTACCGTCAACTGCGGCAGTTACGCCATCTTGCAATAATAGCAGTTCGTCTCCTTCACTGAGCAGACGCAGCAGCGCAGCAAAATCCGTCAGCCa < 2:74054/138‑1 (MQ=255)
aTAGACCTTAAT‑GGGGCATTACGCAGACTTTCAAGGTAGCGGTTACCGTCAACTGCGGCAGTTACGCCATCTTGCAATAATAGCAGTTCGTCTCCTTCACTGAGCAGACGCAGCAGCGCAGCAAAATCCGTCAGCCAg < 1:549910/138‑1 (MQ=255)
tAGACCTTAAT‑GGGGCATTACGCAGACTTTCAAGGTAGCGGTTACCGTCAACTGCGGCAGTTACGCCATCTTGCAATAATAGCAGTTCGTCTCCTTCACTGAGCAGACGCAGCAGCGCAGCAAAATCCGTCAGCCAgg < 2:150371/138‑1 (MQ=255)
tAGACCTTAAT‑GGGGCATTACGCAGACTTTCAAGGTAGCGGTTACCGTCAACTGCGGCAGTTACGCCATCTTGCAATAATAGCAGTTCGTCTCCTTCACTGAGCAGACGCAGCAGCGCAGCAAAATCCGTCAGCCAgg < 2:1166929/138‑1 (MQ=255)
aGACCTTAAT‑GGGGCATTACGCAGACTTTCAAGGTAGCGGTTACCGTCAACTGCGGCAGTTACGCCATCTTGCAATAATAGCAGTTCGTCTCCTTCACTGAGCAGACGCAGCAGCGCAGCAAAATCCGTCAGCCAggg > 2:200162/1‑138 (MQ=255)
gACCTTAAT‑GGGGCATTACGCAGACTTTCAAGGTAGCGGTTACCGTCAACTGCGGCAGTTACGCCATCTTGCAATAATAGCAGTTCGTCTCCTTCACTGAGCAGACGCAGCAGCGCAGCAAAATCCGTCAGCCAGGGt < 2:1454088/138‑1 (MQ=255)
gACCTTAAT‑GGGGCATTACGCAGACTTTCAAGGTAGCGGTTACCGTCAACTGCGGCAGTTACGCCATCTTGCAATAATAGCAGTTCGTCTCCTTCACTGAGCAGACGCAGCAGCGCAGCAAAATCCGTCAGCCAGGGt < 2:4594/138‑1 (MQ=255)
gACCTTAAT‑GGGGCATTACGCAGACTTTCAAGGTAGCGGTTACCGTCAACTGCGGCAGTTACGCCATCTTGCAATAATAGCAGTTCGTCTCCTTCACTGAGCAGACGCAGCAGCGCAGCAAAATCCGTCAGCCAGGGt < 1:65566/138‑1 (MQ=255)
aCCTTAAT‑GGGGCATTACGCAGACTTTCAAGGTAGCGGTTACCGTCAACTGCGGCAGTTACGCCATCTTGCAATAATAGCAGTTCGTCTCCTTCACTGAGCAGACGCAGCAGCGCAGCAAAATCCGTCAGCCAGGGTg < 2:812200/138‑1 (MQ=255)
aCCTTAAT‑GGGGCATTACGCAGACTTTCAAGGTAGCGGTTACCGTCAACTGCGGCAGTTACGCCATCTTGCAATAATAGCAGTTCGTCTCCTTCACTGAGCAGACGCAGCAGCGCAGCAAAATCCGTCAGCCAGGGTg < 2:917969/138‑1 (MQ=255)
cTTAAT‑GGGGCATTACGCAGACTTTCAAGGTAGCGGTTACCGTCAACTGCGGCAGTTACGCCATCTTGCAATAATAGCAGTTCGTCTCCTTCACTGAGCAGACGCAGCAGCGCAGCAAAATCCGTCAGCCAGGGTGAg < 1:1448932/138‑1 (MQ=255)
cTTAAT‑GGGGCATTACGCAGACTTTCAAGGTAGCGGTTACCGTCAACTGCGGCAGTTACGCCATCTTGCAATAATAGCAGTTCGTCTCCTTCACTGAGCAGACGCAGCAGCGCAGCAAAATCCGTCAGCCAGGGTGAg < 1:611112/138‑1 (MQ=255)
|
CATCACCAGGCCATCTGGCTGGGGTGCTTAACCGTAAGTCTGACGAAATCAGTATAGTCAATGAGAATGATGTCGTTCGAAATTTGACCAGTCAAACCGCGGGCAATAAGGTCTTCGTTCAGGGCATAGACCTTAATGGGGGCATTACGCAGACTTTCAAGGTAGCGGTTACCGTCAACTGCGGCAGTTACGCCATCTTGCAATAATAGCAGTTCGTCTCCTTCACTGAGCAGACGCAGCAGCGCAGCAAAATCCGTCAGCCAGGGTGAG > NC_000913/3474676‑3474945
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
