Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A3 F28 I1 R1
|
120 |
93.5 |
3664254 |
88.3% |
3235536 |
136.4 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,925,705 |
G→A |
intergenic (‑72/+307) |
mnmG ← / ← mioC |
5‑carboxymethylaminomethyluridine‑tRNA synthase subunit MnmG/flavoprotein MioC |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,925,705 | 0 | G | A | 100.0%
| 459.4
/ NA
| 128 | intergenic (‑72/+307) | mnmG/mioC | 5‑carboxymethylaminomethyluridine‑tRNA synthase subunit MnmG/flavoprotein MioC |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (46/82); total (46/82) |
Only 100 of 128 total aligned reads displayed.
CGGCCTCGGTGCCTGCATGACCCCCGCCAATGATGATGACGTCAAAAGGATCCGGATAAAACATGGTGATTGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCGGCTTGAGAAAGACCTGGGATCCTGGGTATTAAAAAGAAGATCTATTTATTTAGAGATCTGTTCTATTGTGATCTCTTATTAGGATCGCACTGCCCTGTGGATAACAAGGATCCGGCTTTTAAGATCAACA > NC_000913/3925570‑3925835
|
ggcccTCGGTGCCTGCCTGACTCCCGTCAATGATGATGACGTCAAAAGGATCCGGATAAAACATGGTGATTGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCAGc < 1:1320354/135‑1 (MQ=255)
cTCGGTGTCTGCATGACCCCCGCCAATGATGATGACGTCAAAAGGATCCGGATAAAACATGGTGATTGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCAGCTTga < 1:1634712/138‑1 (MQ=255)
cTCGGTGCCTGCATGCCCCCCGCCAATGATGATGACGTCAAAAGGATCCGGATAAAACATGGTGATTGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCAGCTTga < 2:1405891/138‑1 (MQ=255)
cTCGGTGCCTGCATGACCCCCGCCAATGATGATGACGTCAAAAGGATCCGGATAAAACATGGTGATTGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCAGCTTga < 1:1009895/138‑1 (MQ=255)
cTCGGTGCCTGCATGACCCCCGCCAATGATGATGACGTCAAAAGGATCCGGATAAAACATGGTGATTGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCAGCTTga < 1:1044688/138‑1 (MQ=255)
cTCGGTGCCTGCATGACCCCCGCCAATGATGATGACGTCAAAAGGATCCGGATAAAACATGGTGATTGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCAGCTTga < 1:1309140/138‑1 (MQ=255)
gCCTGCATGACCCCCGCCAATGATGATGACGTCAAAAGGATCCGGATAAAACATGGTGATTGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCAGCTTGAGAAAGa < 1:749736/138‑1 (MQ=255)
gCCTGCATGACCCCCGCCAATGATGATGACGTCAAAAGGATCCGGATAAAACATGGTGATTGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCAGCTTGAGAAAGa < 2:1000754/138‑1 (MQ=255)
gCCTGCATGACCCCCGCCAATGATGATGACGTCAAAAGGATCCGGATAAAACATGGTGATTGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCAGCTTGAGAAAGa > 1:348066/1‑138 (MQ=255)
gCCTGCATGACCCCCGCCAATGATGATGACGTCAAAAGGATCCGGATAAAACATGGTGATTGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCAGCTTGAGAAAGa < 2:348066/138‑1 (MQ=255)
cTGCATGACCCCCGCCAATGATGATGACGTCAAAAGGATCCGGATAAAACATGGTGATTGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCAGCTTGAGAAAGAcc < 2:283853/138‑1 (MQ=255)
cTGCATGACCCCCGCCAATGATGATGACGTCAAAAGGATCCGGATAAAACATGGTGATTGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCAGCTTGAGAAAGAcc < 1:279166/138‑1 (MQ=255)
tGCATGACCCCCGCCAATGATGATGACGTCAAAAGGATCCGGATAAAACATGGTGATTGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCAGCTTGAGAAAGACCt < 2:1046237/138‑1 (MQ=255)
tGCATGACCCCCGCCAATGATGATGACGTCAAAAGGATCCGGATAAAACATGGTGATTGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCAGCTTGAGAAAGACCt < 2:260477/138‑1 (MQ=255)
aTGACCCCCGCCAATGATGATGACGTCAAAAGGATCCGGATAAAACATGGTGATTGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCAGCTTGAGAAAGACCTggg < 2:916745/138‑1 (MQ=255)
aCCCCCGCCAATGATGATGACGTCAAAAGGATCCGGATAAAACATGGTGATTGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCAGCTTGAGAAAGACCTGGGATc < 1:166334/138‑1 (MQ=255)
ccccGCCAATGATGATGACGTCAAAAGGATCCGGATAAAACATGGTGATTGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCAGCTTGAGAAAGACCTGGGATCCt > 2:1555197/1‑138 (MQ=255)
ccGCCAATGATGATGACGTCAAAAGGATCCGGATAAAACATGGTGATTGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCAGCTTGAGAAAGACCTGGGATCCTgg > 1:709771/1‑138 (MQ=255)
atgatgaCGTCAAAAGGATCCGGATAAAACATGGTGATTGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCAGCTTGAGAAAGACCTGGGATCCTGGGTATTaaaa > 2:1022700/1‑138 (MQ=255)
atgatgaCGTCAAAAGGATCCGGATAAAACATGGTGATTGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCAGCTTGAGAAAGACCTGGGATCCTGGGTATTaaaa < 1:1542348/138‑1 (MQ=255)
atgatgaCGTCAAAAGGATCCGGATAAAACATGGTGATTGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCAGCTTGAGAAAGACCTGGGATCCTGGGTATTaaaa > 1:1552591/1‑138 (MQ=255)
aCGTCAAAAGGATCCGGATAAAACATGGTGATTGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCAGCTTGAGAAAGACCTGGGATCCTGGGTATTAAAAagaaga < 2:1809529/138‑1 (MQ=255)
tCAAAAGGATCCGGATAAAACATGGTGATTGCCTCGCATAATGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCAGCTTGAGAAAGACCTGGGATCCTGGGTATTAAAAAGAAGATCt > 1:224390/1‑138 (MQ=255)
tCAAAAGGATCCGGATAAAACATGGTGATTGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCAGCTTGAGAAAGACCTGGGATCCTGGGTATTAAAAAGAAGATCt > 1:268292/1‑138 (MQ=255)
cAAAAGGATCCGGATAAAACATGGTGATTGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCAGCTTGAGAAAGACCTGGGATCCTGGGTATTAAAAAGAAGATCt < 2:299547/137‑1 (MQ=255)
cAAAAGGATCCGGATAAAACATGGTGATTGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCAGCTTGAGAAAGACCTGGGATCCTGGGTATTAAAAAGAAGATCt > 1:299547/1‑137 (MQ=255)
aaaaGGATCCGGATAAAACATGGTGATTGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCAGCTTGAGAAAGACCTGGGATCCTGGGTATTAAAAAGAAGATCtat > 1:1200323/1‑138 (MQ=255)
aaGGATCCGGATAAAACATGGTGATTGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCAGCTTGAGAAAGACCTGGGATCCTGGGTATTAAAAAGAAGATCtattt > 2:339919/1‑138 (MQ=255)
aGGATCCGGATAAAACATGGTGATTGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCAGCTTGAGAAAGACCTGGGATCCTGGGTATTAAAAAGAAGATCtattta < 1:431059/138‑1 (MQ=255)
gATCCGGATAAAACATGGTGATTGCCTCGCATAACGCGGTATCAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCAGCTTGATAAAGACCTGGGATCCTGGGTATTAAAAAGAAGATCtatttatt < 2:1710484/138‑1 (MQ=255)
tCCGGATAAAACATGGTGATTGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCAGCTTGAGAAAGACCTGGGATCCTGGGTATTAAAAAGAAGATCTAtttattta > 1:746347/1‑138 (MQ=255)
ccGGATAAAACATGGTGATTGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCAGCTTGAGAAAGACCTGGGATCCTGGGTATTAAAAAGAAGATCTATTTATTTag < 2:1552591/138‑1 (MQ=255)
ccGGATAAAACATGGTGATTGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCAGCTTGAGAAAGACCTGGGATCCTGGGTATTAAAAAGAAGATCTATTTATTTag < 1:46820/138‑1 (MQ=255)
ggATAAAACATGGTGATTGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCAGCTTGAGAAAGACCTGGGATCCTGGGTATTAAAAAGAAGATCt > 2:31464/1‑126 (MQ=255)
ggATAAAACATGGTGATTGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCAGCTTGAGAAAGACCTGGGATCCTGGGTATTAAAAAGAAGATCt < 1:31464/126‑1 (MQ=255)
ggATAAAACATGGTGATTGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCAGCTTGAGAAAGACCTGGGATCCTGGGTATTAAAAAGAAGATCTATTTATTTagag < 1:1735779/138‑1 (MQ=255)
ggATAAAACATGGTGATTGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCAGCTTGAGAAAGACCTGGGATCCTGGGTATTAAAAAGAAGATCTATTTATTTagag < 1:751644/138‑1 (MQ=255)
aTAAAACATGGTGATTGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCAGCTTGAGAAAGACCTGGGATCCTGGGTATTAAAAAGAAGATCTATTTATTTAGAGAt > 1:1566777/1‑138 (MQ=255)
aTAAAACATGGTGATTGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCAGCTTGAGAAAGACCTGGGATCCTGGGTATTAAAAAGAAGATCTATTTATTTAGAGAt > 2:577335/1‑138 (MQ=255)
tAAAACATGGTGATTGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCAGCTTGAGAAAGACCTGGGATCCTGGGTATTAAAAAGAAGATCTATTTATTTAGAGATc < 2:194467/138‑1 (MQ=255)
aaaaCATGGTGATTGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCAGCTTGAGAAAGACCTGGGATCCTGGGTATTAAAAAGAAGATCTATTTATTTAGAGATCt < 1:1555197/138‑1 (MQ=255)
aaaCATGGTGATTGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCAGCTTGAGAAAGACCTGGGATCCTGGGTATTAAAAAGAAGATCTATTTATTTAGAGATCTg < 2:595477/138‑1 (MQ=255)
aCATGGTGATTGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCAGCTTGAGAAAGACCTGGGATCCTGGGTATTAAAAAGAAGATCTATTTATTTAGAGATCTGtt < 2:709771/138‑1 (MQ=255)
gTGATTGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCAGCTTGAGAAAGACCTGGGATCCTGGGTATTAAAAAGAAGATCTATTTATTTAGAGATCTGTTCTAtt < 2:1756473/138‑1 (MQ=255)
tGATTGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCAGCTTGAGAAAGACCTGGGATCCTGGGTATTAAAAAGAAGATCTATTTATTTAGAGATCTGTTCTATtg < 2:764900/138‑1 (MQ=255)
tGATTGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCAGCTTGAGAAAGACCTGGGATCCTGGGTATTAAAAAGAAGATCTATTTATTTAGAGATCTGTTCTATtg > 1:1026340/1‑138 (MQ=255)
tGATTGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCAGCTTGAGAAAGACCTGGGATCCTGGGTATTAAAAAGAAGATCTATTTATTTAGAGATCTGTTCTATtg < 1:574000/138‑1 (MQ=255)
tGATTGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCCACTCAACTTTGTCAGCTTGAGAAAGACCTGGGATCCTGGGTATTAAAAAGAAGATCTATTTATTTAGAGATCTGTTCTATtg < 2:459346/138‑1 (MQ=255)
aTTGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCAGCTTGAGAAAGACCTGGGATCCTGGGTATTAAAAAGAAGATCTATTTATTTAGAGATCTGTTCTATtgtg < 2:1003878/138‑1 (MQ=255)
aTTGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCAGCTTGAGAAAGACCTGGGATCCTGGGTATTAAAAAGAAGATCTATTTATTTAGAGATCTGTTCTATtgtg < 1:577335/138‑1 (MQ=255)
aTTGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCAGCTTGAGAAAGACCTGGGATCCTGGGTATTAAAAAGAAGATCTATTTATTTAGAGATCTGTTCTATtgtg < 1:1324892/138‑1 (MQ=255)
tGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCAGCTTGAGAAAGACCTGGGATCCTGGGTATTAAAAAGAAGATCTATTTATTTAGAGATCTGTTCTATTGTGAt > 2:741949/1‑138 (MQ=255)
tGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCAGCTTGAGAAAGACCTGGGATCCTGGGTATTAAAAAGAAGATCTATTTATTTAGAGATCTGTTCTATTGTGAt > 1:1733432/1‑138 (MQ=255)
tGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCAGCTTGAGAAAGACCTGGGATCCTGGGTATTAAAAAGAAGATCTATTTATTTAGAGATCTGTTCTATTGTGAt < 1:815205/138‑1 (MQ=255)
tGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCAGCTTGAGAAAGACCTGGGATCCTGGGTATTAAAAAGAAGATCTATTTATTTAGAGATCTGTTCTATTGTGAt < 2:1540788/138‑1 (MQ=255)
gCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCAGCTTGAGAAAGACCTGGGATCCTGGGTATTAAAAAGAAGATCTATTTATTTAGAGATCTGTTCTATtgtg > 1:742170/1‑135 (MQ=255)
cATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCAGCTTGAGAAAGACCTGGGATCCTGGGTATTAAAAAGAAGATCTATTTATTTAGAGATCTGTTCTATtgtg > 1:1353510/1‑129 (MQ=255)
cATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCAGCTTGAGAAAGACCTGGGATCCTGGGTATTAAAAAGAAGATCTATTTATTTAGAGATCTGTTCTATtgtg < 2:1353510/129‑1 (MQ=255)
cgcgGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCAGCTTGAGAAAGACCTGGGATCCTGGGTATTAAAAAGAAGATCTATTTATTTAGAGATCTGTTCTATtgtg > 1:156238/1‑124 (MQ=255)
cgcgGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCAGCTTGAGAAAGACCTGGGATCCTGGGTATTAAAAAGAAGATCTATTTATTTAGAGATCTGTTCTATtgtg < 2:156238/124‑1 (MQ=255)
gcgGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCAGCTTGAGAAAGACCTGGGATCCTGGGTATTAAAAAGAAGATCTATTTATTTAGAGATCTGTTCTATTGTGATCTCTTATTAGGAt < 2:1471303/138‑1 (MQ=255)
cgGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCAGCTTGAGAAAGACCTGGGATCCTGGGTATTAAAAAGAAGATCTATTTATTTAGAGATCTGTTCTATTGTGATCTCTTATTAGGATc > 2:581102/1‑138 (MQ=255)
cgGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCAGCTTGAGAAAGACCTGGGATCCTGGGTATTAAAAAGAAGATCTATTTATTTAGAGATCTGTTCTATTGTGATCTCTTATTAGGATc > 1:1188348/1‑138 (MQ=255)
cgGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCAGCTTGAGAAAGACCTGGGATCCTGGGTATTAAAAAGAAGATCTATTTATTTAGAGATCTGTTCTATTGTGATCTCTTATTAGGATc > 2:809557/1‑138 (MQ=255)
cgGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCAGCTTGAGAAAGACCTGGGATCCTGGGTATTAAAAAGAAGATCTATTTATTTAGAGATCTGTTCTATTGTGATCTCTTATTAGGATc > 1:140068/1‑138 (MQ=255)
ggTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCAGCTTGAGAAAGACCTGGGATCCTGGGTATTAAAAAGAAGATCTATTTATTTAGAGATCTGTTCTATTGTGATCTCTTATTAGGATCg < 2:485326/138‑1 (MQ=255)
tATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCAGCTTGAGAAAGACCTGGGATCCTGGGTATTAAAAAGAAGATCTATTTATTTAGAGATCTGTTCTATTGTGATCTCTTATTAGGATCGCa < 2:767065/138‑1 (MQ=255)
tATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCAGCTTGAGAAAGACCTGGGATCCTGGGTATTAAAAAGAAGATCTATTTATTTAGAGATCTGTTCTATTGTGATCTCTTATTAGGATCGCa < 1:216490/138‑1 (MQ=255)
tATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCAGCTTGAGAAAGACCTGGGATCCTGGGTATTAAAAAGAAGATCTATTTATTTAGAGATCTGTTCTATTGTGATCTCTTATTAGGATCGCa < 1:591946/138‑1 (MQ=255)
tATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCAGCTTGAGAAAGACCTGGGATCCTGGGTATTAAAAAGAAGATCTATTTATTTAGAGATCTGTTCTATTGTGATCTCTTATTAGGATCGCa < 2:1733432/138‑1 (MQ=255)
tATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCAGCTTGAGAAAGACCTGGGATCCTGGGTATTAAAAAGAAGATCTATTTATTTAGAGATCTGTTCTATTGTGATCTCTTATTAGGATCGCa < 1:888737/138‑1 (MQ=255)
tATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCAGCTTGAGAAAGACCTGGGATCCTGGGTATTAAAAAGAAGATCTATTTATTTAGAGATCTGTTCTATTGTGATCTCTTATTAGGATCGCa < 2:156058/138‑1 (MQ=255)
tATGAAAATGGATTGAAGCCCGGGCCGTAGATTCTACTCAACTTTGTCAGCTTGAGAAAGACCTGGGATCCTGGGTATTAAAAAGAAGATCTATTTATTTAGAGATCTGTTCTATTGTGATCTCTTATTAGGATCGCa < 1:1374204/138‑1 (MQ=255)
tGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCAGCTTGAGAAAGACCTGGGATCCTGGGTATTAAAAAGAAGATCTATTTATTTAGAGATCTGTTCTATTGTGATCTCTTATTAGGATCGCACt > 2:1314357/1‑138 (MQ=255)
tGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCAGCTTGAGAAAGACCTGGGATCCTGGGTATTAAAAAGAAGATCTATTTATTTAGAGATCTGTTCTATTGTGATCTCTTATTAGGATCGCACt > 1:1699647/1‑138 (MQ=255)
gAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCAGCTTGAGAAAGACCTGGGATCCTGGGTATTAAAAAGAAGATCTATTTATTTAGAGATCTGTTCTATTGTGATCTCTTATTAGGATCGCACTg < 2:1699647/138‑1 (MQ=255)
gAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCAGCTTGAGAAAGACCTGGGATCCTGGGTATTAAAAAGAAGATCTATTTATTTAGAGATCTGTTCTATTGTGATCTCTTATTAGGATCGCACTg < 2:1188348/138‑1 (MQ=255)
gAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCAGCTTGAGAAAGACCTGGGATCCTGGGTATTAAAAAGAAGATCTATTTATTTAGAGATCTGTTCTATTGTGATCTCTTATTAGGATCGCACTg < 2:268292/138‑1 (MQ=255)
aaaTGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCAGCTTGAGAAAGACCTGGGATCCTGGGTATTAAAAAGAAGATCTATTTATTTAGAGATCTGTTCTATTGTGATCTCTTATTAGGATCGCACTGcc < 1:801249/138‑1 (MQ=255)
aaTGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCAGCTTGAGAAAGACCTGGGATCCTGGGTATTAAAAAGAAGATCTATTTATTTAGAGATCTGTTCTATTGTGATCTCTTATTAGGATCGCACTGccc < 1:1368213/138‑1 (MQ=255)
aTGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCAGCTTGAGAAAGACCTGGGATCCTGGGTATTAAAAAGAAGATCTATTTATTTAGAGATCTGTTCTATTGTGATCTCTTATTAGGATCGCACTGCCCt > 2:780689/1‑138 (MQ=255)
tGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCAGCTTGAGAAAGACCTGTGATCCTGGGTATTAAAAAGAAGATCTATTTATTTAGAGATCTGTTCTATTGTGATCTCTTATTAGGATCGCACTGCCCtg > 2:1268004/1‑138 (MQ=255)
gATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCAGCTTGAGAAAGACCTGGGATCCTGGGTATTAAAAAGAAGATCTATTTATTTAGAGATCTGTTCTATTGTGATCTCTTATTAGGATCGCACTGCCCtgtg < 1:581102/138‑1 (MQ=255)
aTTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCAGCTTGAGAAAGACCTGGGATCCTGGGTATTAAAAAGAAGATCTATTTATTTAGAGATCTGTTCTATTGTGATCTCTTATTAGGATCGCACTGCCCTGTgg < 1:310141/138‑1 (MQ=255)
ttGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCAGCTTGAGAAAGACCTGGGATCCTGGGTATTAAAAAGAAGATCTATTTATTTAGAGATCTGTTCTATTGTGATCTCTTATTAGGATCGCa < 2:778427/126‑1 (MQ=255)
ttGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCAGCTTGAGAAAGACCTGGGATCCTGGGTATTAAAAAGAAGATCTATTTATTTAGAGATCTGTTCTATTGTGATCTCTTATTAGGATCGCa > 1:778427/1‑126 (MQ=255)
ttGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCAGCTTGAGAAAGACCTGGGATCCTGGGTATTAAAAAGAAGATCTATTTATTTAGAGATCTGTTCTATTGTGATCTCTTATTAGGATCGCACTGCCCTGTGGa > 2:902184/1‑138 (MQ=255)
tGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCAGCTTGAGAAAGACCTGGGATCCTGGGTATTAAAAAGAAGATCTATTTATTTAGAGATCTGTTCTATTGTGATCTCTTATTAGGATCGCACTGCCCTGTGGAt > 2:1449927/1‑138 (MQ=255)
gAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCAGCTTGAGAAAGACCTGGGATCCTGGGTATTAAAAAGAAGATCTATTTATTTAGAGATCTGTTCTATTGTGATCTCTTATTAGGATCGCACTGCCCTGTGGATa < 2:140068/138‑1 (MQ=255)
gCCCGGGCCGTGGATTCTACTCAACTTTGTCAGCTTGAGAAAGACCTGGGATCCTGGGTATTAAAAAGAAGATCTATTTATTTAGAGATCTGTTCTATTGTGATCTCTTATTAGGATCg < 2:1352936/119‑1 (MQ=255)
ccGTGGATTCTACTCAACTTTGTCAGCTTGAGAAAGACCTGGGATCCTGGGTATTAAAAAGAAGATCTATTTATTTAGAGATCTGTTCTATTGTGATCTCTTATTAGGATCGCACTGCCCTGTGGATAACAAGGATcc < 2:1103007/138‑1 (MQ=255)
tGGATTCTACTCAACTTTGTCAGCTTGAGAAAGACCTGGGATCCTGGGTATTAAAAAGAAGATCTATTTATTTAGAGATCTGTTCTATTGTGATCTCTTATTAGGATCGCACTGCCCTGTGGATAACAAGGATCCGGc < 1:1071971/138‑1 (MQ=255)
tGGATTCTACTCAACTTTGTCAGCTTGAGAAAGACCTGGGATCCTGGGTATTAAAAAGAAGATCTATTTATTTAGAGATCTGTTCTATTGTGATCTCTTATTAGGATCGCACTGCCCTGTGGATAACAAGGATCCGGc < 1:1268004/138‑1 (MQ=255)
tGGATTCTACTCAACTTTGTCAGCTTGAGAAAGACCTGGGATCCTGGGTATTAAAAAGAAGATCTATTTATTTAGAGATCTGTTCTATTGTGATCTCTTATTAGGATCGCACTGCCCTGTGGATAACAAGGATCCGGc < 1:336147/138‑1 (MQ=255)
aTTCTACTCAACTTTGTCAGCTTGAGAAAGACCTGGGATCCTGGGTATTAAAAAGAAGATCTATTTATTTAGAGATCTGTTCTATTGTGATCTCTTATTAGGATCGCACTGCCCTGTGGATAACAAGGATCCGGCttt < 2:1819453/138‑1 (MQ=255)
tCAACTTTGTCAGCTTGAGAAAGACCTGGGATCCTGGGTATTAAAAAGAAGATCTATTTATTTAGAGATCTGTTCTATTGTGATCTCTTATTAGGATCGCACTGCCCTGTGGATAACAAGGATCCGGCTTTTAAGATc < 1:318431/138‑1 (MQ=255)
tCAACTTTGTCAGCTTGAGAAAGACCTGGGATCCTGGGTATTAAAAAGAAGATCTATTTATTTAGAGATCTGTTCTATTGTGATCTCTTATTAGGATCGCACTGCCCTGTGGATAACAAGGATCCGGCTTTTAAGATc < 2:1200323/138‑1 (MQ=255)
tCAACTTTGTCAGCTTGAGAAAGACCTGGGATCCTGGGTATTAAAAAGAAGATCTATTTATTTAGAGATCTGTTCTATTGTGATCTCTTATTAGGATCGCACTGCCCTGTGGATAACAAGGATCCGGCTTTTAAGATc < 1:704967/138‑1 (MQ=255)
tCAACTTTGTCAGCTTGAGAAAGACCTGGGATCCTGGGTATTAAAAAGAAGATCTATTTATTTAGAGATCTGTTCTATTGTGATCTCTTATTAGGATCGCACTGCCCTGTGGATAACAAGGATCCGGCTTTTAAGATc < 1:902184/138‑1 (MQ=255)
tttGTCAGCTTGAGAAAGACCTGGGATCCTGGGTATTAAAAAGAAGATCTATTTATTTAGAGATCTGTTCTATTGTGATCTCTTATTAGGATCGCACTGCCCTGTGGATAACAAGGATCCGGCtt < 1:1192564/125‑1 (MQ=255)
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CGGCCTCGGTGCCTGCATGACCCCCGCCAATGATGATGACGTCAAAAGGATCCGGATAAAACATGGTGATTGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCGGCTTGAGAAAGACCTGGGATCCTGGGTATTAAAAAGAAGATCTATTTATTTAGAGATCTGTTCTATTGTGATCTCTTATTAGGATCGCACTGCCCTGTGGATAACAAGGATCCGGCTTTTAAGATCAACA > NC_000913/3925570‑3925835
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
