Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A3 F28 I1 R1
|
120 |
93.5 |
3664254 |
88.3% |
3235536 |
136.4 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,622,059 |
A→G |
E97E (GAA→GAG) |
yjjJ → |
toxin YjjJ |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,622,059 | 0 | A | G | 99.1%
| 399.6
/ ‑4.7
| 109 | E97E (GAA→GAG) | yjjJ | toxin YjjJ |
| Reads supporting (aligned to +/- strand): ref base A (0/1); new base G (48/60); total (48/61) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.92e-01 |
Only 100 of 112 total aligned reads displayed.
CTGCGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAACAGTGGTTTGATGGTTTGCCCTGGTATTTGACCGATCTCCGACCGCAGGGCTTTTTAGGGCGCGCGTGGGGCAGGAAGTTAGCCGCGCAACTGAATCTGACTGATGATATACGTCTCTGGCAGGAAGAAGATG > NC_000913/4621925‑4622192
|
ctgcGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAGCAg > 2:563430/1‑138 (MQ=255)
ctgcGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAGCAg > 1:240027/1‑138 (MQ=255)
gcGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAGCAGTg > 1:105911/1‑138 (MQ=255)
gcGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAGCAGTg > 2:227592/1‑138 (MQ=255)
gcGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAGCAGTg > 2:1413803/1‑138 (MQ=255)
cGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAGCAGTgg > 1:1602565/1‑138 (MQ=255)
tCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAGCAGTGGtt > 2:1653936/1‑138 (MQ=255)
tCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAGCAGTGGtt < 2:1180728/138‑1 (MQ=255)
tCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAGCAGTGGtt > 1:830705/1‑138 (MQ=255)
tCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAGCAGTGGtt > 1:596006/1‑138 (MQ=255)
tCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAGCAGTGGtt < 1:314292/138‑1 (MQ=255)
cTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAGCAGTGGTTTg > 2:459783/1‑138 (MQ=255)
aTCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAGCAGTGGTTTGATg < 1:750255/138‑1 (MQ=255)
aTCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAGCAGTGGTTTGATg < 1:1413803/138‑1 (MQ=255)
cgcgGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAGCAGTGGt > 2:159358/1‑130 (MQ=255)
cgcgGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAGCAGTGGt < 1:159358/130‑1 (MQ=255)
cgcgGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAGCAGTGGTTTGATGGt > 2:1760551/1‑138 (MQ=255)
cgcgGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAGCAGTGGTTTGATGGt > 2:216237/1‑138 (MQ=255)
cgcgGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAGCAGTGGTTTGATGGt > 2:1143336/1‑138 (MQ=255)
gcgGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGAGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAGCAGTGGTTTGATGGtt > 2:884632/1‑138 (MQ=255)
aTTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAGCAGTGGTTTGATGGTTTGccc > 2:1095013/1‑138 (MQ=255)
gAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAGCAGTGGTTTGATGGTTTGCCCTgg > 2:576088/1‑138 (MQ=255)
gCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAGCAGTGGTTTGATGGTTTGCCCTGGTa < 1:459783/138‑1 (MQ=255)
gCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCCGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAGCAGTGGTTTGATGGTTTGCCCTGGTa < 1:1134630/138‑1 (MQ=255)
cGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAGCAGTGGTTTGATGGTTTGCCCTGGTAt > 2:1326461/1‑138 (MQ=255)
aTTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAGCAGTGGTTTGATGGTTTGCCCTGGTATTTg < 1:729168/138‑1 (MQ=255)
aTTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAGCAGTGGTTTGATGGTTTGCCCTGGTATTTg < 1:1760551/138‑1 (MQ=255)
aTTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAGCAGTGGTTTGATGGTTTGCCCTGGTATTTg < 2:596006/138‑1 (MQ=255)
aTTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAGCAGTGGTTTGATGGTTTGCCCTGGTATTTg < 2:57431/138‑1 (MQ=255)
aTTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAGCAGTGGTTTGATGGTTTGCCCTGGTATTTg < 1:944885/138‑1 (MQ=255)
tCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAGCAGTGGTTTGATGGTTTGCCCTGGTATTTGAc > 1:1680832/1‑138 (MQ=255)
cccGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAGCAGTGGTTTGATGGTTTGCCCTGGTATTTGAcc < 2:1602565/138‑1 (MQ=255)
ccGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAGCAGTGGTTTGATGGTTTGCCCTGGTATTTGACCg > 2:779748/1‑138 (MQ=255)
ccGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAGCAGTGGTTTGATGGTTTGCCCTGGTATTTGACCg > 2:257824/1‑138 (MQ=255)
tGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAGCAGTGGTTTGATGGTTTGCCCTGGTATTTGACCGAtctc > 1:1651112/1‑138 (MQ=255)
gcgggcggACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAGCAGTGGTTTGATGGTTTGCCCTGGTATTTGACCGATCTCCg > 1:1415375/1‑138 (MQ=255)
cGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAGCAGTGGTTTGATGGTTTGCCCTGGTATTTGACCGATCTCCGa < 1:601449/138‑1 (MQ=255)
gTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAGCAGTGGTTTGATGGTTTGCCCTGGTATTTGACCGATCTCCGACCg < 2:361425/138‑1 (MQ=255)
gTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAGCAGTGGTTTGATGGTTTGCCCTGGTATTTGACCGATCTCCGACCg < 1:106657/138‑1 (MQ=255)
ggACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAGCAGTGGTTTGATGGTTTGCCCTGGTATTTGACCGATCTCCGACCGCa < 2:1514035/138‑1 (MQ=255)
ggACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAGCAGTGGTTTGATGGTTTGCCCTGGTATTTGACCGATCTCCGACCGCa < 2:1145834/138‑1 (MQ=255)
gACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAGCAGTGGTTTGATGGTTTGCCCTGGTATTTGACCGATCTCCGACCGCAg > 1:1157024/1‑138 (MQ=255)
cGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAGCAGTGGTTTGATGGTTTGCCCTGGTATTTGACCGATCTCCGACCGCAggg > 1:661993/1‑138 (MQ=255)
cGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAGCAGTGGTTTGATGGTTTGCCCTGGTATTTGACCGATCTCCGACCGCAggg > 2:1412891/1‑138 (MQ=255)
gAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAGCAGTGGTTTGATGGTTTGCCCTGGTATTTGACCGATCTCCGACCGCAGGGCTTTTTAg < 2:661993/138‑1 (MQ=255)
gAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAGCAGTGGTTTGATGGTTTGCCCTGGTATTTGACCGATCTCCGACCGCAGGGCTTTTTAg > 1:1656953/1‑138 (MQ=255)
gAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAGCAGTGGTTTGATGGTTTGCCCTGGTATTTGACCGATCTCCGACCGCAGGGCTTTTTAg < 2:1157024/138‑1 (MQ=255)
aaaGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAGCAGTGGTTTGATGGTTTGCCCTGGTATTTGACCGATCTCCGACCGCAGGGCTTTTTAgg < 1:257824/138‑1 (MQ=255)
aGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAGCAGTGGTTTGATGGTTTGCCCTGGTATTTGACCGATCTCCGACCGCAGGGCTTTTTAGGgc > 1:1377512/1‑138 (MQ=255)
cgcATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAGCAGTGGTTTGATGGTTTGCCCTGGTATTTGACCGATCTCCGACCGCAGGGCTTTTTAGGgcgcg < 2:1651112/138‑1 (MQ=255)
cgcATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAGCAGTGGTTTGATGGTTTGCCCTGGTATTTGACCGATCTCCGACCGCAGGGCTTTTTAGGgcgcg < 1:1413732/138‑1 (MQ=255)
gcATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTATCAGGCGCAGATGGCGACGAGCAGTGGTTTGATGGTTTGCCCTGGTATTTGACCGATCTCCGACCGCAGGGCTTTTTAGGgcgcgc > 1:1178183/1‑138 (MQ=255)
gcATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAGCAGTGGTTTGATGGTTTGCCCTGGTATTTGACCGATCTCCGACCGCAGGGCTTTTTAgg < 2:1600868/132‑1 (MQ=255)
gcATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAGCAGTGGTTTGATGGTTTGCCCTGGTATTTGACCGATCTCCGACCGCAGGGCTTTTTAGGgcgcgc < 2:1677748/138‑1 (MQ=255)
gcATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAGCAGTGGTTTGATGGTTTGCCCTGGTATTTGACCGATCTCCGACCGCAGGGCTTTTTAGGgcgcgc < 1:164841/138‑1 (MQ=255)
gcATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGACGGCGACGAGCAGTGGTTTGATGGTTTGCCCTGGTATTTGACCGATCTCCGACCGCAGGGCTTTTTAgg > 1:1600868/1‑132 (MQ=255)
cATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAGCAGTGGTTTGATGGTTTGCCCTGGTATTTGACCGATCTCCGACCGCAGGGCTTTTTAGGGcgcgcg > 1:1397860/1‑138 (MQ=255)
aTAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAGCAGTGGTTTGATGGTTTGCCCTGGTATTTGACCGATCTCCGACCGCAGGGCTTTTTAGGGCGCGCGt < 1:1326461/138‑1 (MQ=255)
aaTTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAGCAGTGGTTTGATGGTTTGCCCTGGTATTTGACCGATCTCCGACCGCAGGGCTTTTTAGGGCGCGCGTggg < 1:1781922/138‑1 (MQ=255)
gCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAGCAGTGGTTTGATGGTTTGCCCTGGTATTTGACCGATCTCCGACCGCAGGGCTTTTTAGGGCGCGCGTGGGGCAgg > 2:816048/1‑138 (MQ=255)
cATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAGCAGTGGTTTGATGGTTTGCCCTGGTATTTGACCGATCTCCGACCGCAGGGCTTTTTAGGGCGCGCGTGGGGCAGGAAGtt < 1:884632/138‑1 (MQ=255)
ccGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAGCAGTGGTTTGATGGTTTGCCCTGGTATTTGACCGATCTCCGACCGCAGGGCTTTTTAGGGCGCGCGTGGGGCAGGAAGTTAGc < 2:1377512/138‑1 (MQ=255)
cGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTATCAGGCGCAGATGGCGACGAGCAGTGGTTTGATGGTTTGCCCTGGTATTTGACCGATCTCCGACCGCAGGGCTTTTTAGGGCGCGCGTGGGGCAGGAAGTTAGcc < 2:1178183/138‑1 (MQ=255)
ggCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAGCAGTGGTTTGATGGTTTGCCCTGGTATTTGACCGATCTCCGACCGCAGGGCTTTTTAGGGCGCGCGTGGGGCAGGAAGTTAGCCGCGCAACTGa < 2:81660/138‑1 (MQ=255)
ggCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAGCAGTGGTTTGATGGTTTGCCCTGGTATTTGACCGATCTCCGACCGCAGGGCTTTTTAGGGCGCGCGTGGGGCAGGAAGTTAGCCGCGCAACTGa > 2:1146469/1‑138 (MQ=255)
cGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAGCAGTGGTTTGATGGTTTGCCCTGGTATTTGACCGATCTCCGACCGCAGGGCTTTTTAGGGCGCGCGTGGGGCAGGAAGTTAGCCGCGCACCTGAATc < 2:240027/138‑1 (MQ=255)
gCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAGCAGTGGTTTGATGGTTTGCCCTGGTATTTGACCGATCTCCGACCGCAGGGCTTTTTAGGGCGCGCGTGGGGCAGGAAGTTAGCCGCGCAACTGAATct < 1:1143336/138‑1 (MQ=255)
gCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAGCAGTGGTTTGATGGTTTGCCCTGGTATTTGACCGATCTCCGACCGCAGGGCTTTTTAGGGCGCGCGTGGGGCAGGAAGTTAGCCGCGCAACTGAATct < 1:779748/138‑1 (MQ=255)
cAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAGCAGTGGTTTGATGGTTTGCCCTGGTATTTGACCGATCTCCGACCGCAGGGCTTTTTAGGGCGCGCGTGGGGCAGGAAGTTAGCCGCGCAACTGAATctg < 2:1720317/138‑1 (MQ=255)
cAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAGCAGTGGTTTGATGGTTTGCCCTGGTATTTGACCGATCTCCGACCGCAGGGCTTTTTAGGGCGCGCGTGGGGCAGGAAGTTAGCCGCGCAACTGAATctg < 2:633139/138‑1 (MQ=255)
cAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAGCAGTGGTTTGATGGTTTGCCCTGGTATTTGACCGATCTCCGACCGCAGGGCTTTTTAGGGCGCGCGTGGGGCAGGAAGTTAGCCGCGCAACTGAATctg < 2:163963/138‑1 (MQ=255)
cAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAGCAGTGGTTTGATGGTTTGCCCTGGTATTTGACCGATCTCCGACCGCAGGGCTTTTTAGGGCGCGCGTGGGGCAGGAAGTTAGCCGCGCAACTGAATctg < 2:1402006/138‑1 (MQ=255)
aGGGAAGTTGTCTGGTTACAGGCGCAGATGGCGACGAGCAGTGGTGTGATGGTTTGCCCTGGTATTTGACCGATCTCCGACCGCAGGGCTTTTTAGGGCGCGCGTGGGGCAGGAAGTTAGCCGCGCAACTGAATctga < 2:1070823/138‑1 (MQ=255)
aGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAGCAGTGGTTTGATGGTTTGCCCTGGTATTTGACCGATCTCCGACCGCAGGGCTTTTTAGGGCGCGCGTGGGGCAGGAAGTTAGCCGCGCAACTGAATctga < 1:816048/138‑1 (MQ=255)
aGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAGCAGTGGTTTGATGGTTTGCCCTGGTATTTGACCGATCTCCGACCGCAGGGCTTTTTAGGGCGCGCGTGGGGCAGGAAGTTAGCCGCGCAACTGAATctga < 2:289501/138‑1 (MQ=255)
aGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAGCAGTGGTTTGATGGTTTGCCCTGGTATTTGACCGATCTCCGACCGCAGGGCTTTTTAGGGCGCGCGTGGGGCAGGAAGTTAGCCGCGCAACTGAATctga < 1:542314/138‑1 (MQ=255)
aGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAACAGTGGTTTGATGGTTTGCCCTGGTATTTGACCGATCTCCGACCGCAGGGCTTTTTAGGGCGCGCGTGGGGCAGGAAGTTAGCCGCGCAACTGAATctga < 1:666216/138‑1 (MQ=255)
gggAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAGCAGTGGTTTGATGGTTTGCCCTGGTATTTGACCGATCTCCGACCGCAGGGCTTTTTAGGGCGCGCGTGGGGCAGGAAGTTAGCCGCGCAACTGAATctgac < 2:830705/138‑1 (MQ=255)
gggAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAGCAGTGGTTTGATGGTTTGCCCTGGTATTTGACCGATCTCCGACCGCAGGGCTTTTTAGGGCGCGCGTGGGGCAGGAAGTTAGCCGCGCAACTGAATctgac < 2:1680832/138‑1 (MQ=255)
ggcaGTTGTCTGGTAACAGGCGGAGATGGCGACGAACAGGGGTTTGATGGTTTGCCCTGGTATTTGACCGATCTCCGACCGCAGGGCTTTTTAGGGCGCGCGAGGGGCAGGAAGTTAGCCGCGCAACTGAATctgact > 2:802171/4‑138 (MQ=255)
ggAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAGCAGTGGTTTGATGGTTTGCCCTGGTATTTGACCGATCTCCGACCGCAGGGCTTTTTAGGGCGCGCGTGGGGCAGGAAGTTAGcc < 1:1291296/120‑1 (MQ=255)
ggAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAGCAGTGGTTTGATGGTTTGCCCTGGTATTTGACCGATCTCCGACCGCAGGGCTTTTTAGGGCGCGCGTGGGGCAGGAAGTTAGcc > 2:1291296/1‑120 (MQ=255)
ggAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAGCAGTGGTTTGATGGTTTGCCCTGGTATTTGACCGATCTCCGACCGCAGGGCTTTTTAGGGCGCGCGTGGGGCAGGAAGTTAGCCGCGCAACTGAATctgact > 1:1045414/1‑138 (MQ=255)
ggAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAGCAGTGGTTTGATGGTTTGCCCTGGTATTTGACCGATCTCCGACCGCAGGGCTTTTTAGGGCGCGCGTGGGGCAGGAAGTTAGCCGCGCAACTGAATctgact > 1:1721112/1‑138 (MQ=255)
ggAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAGCAGTGGTTTGATGGTTTGCCCTGGTATTTGACCGATCTCCGACCGCAGGGCTTTTTAGGGCGCGCGTGGGGCAGGAAGTTAGCCGCGCAACTGAATctgact < 1:1146469/138‑1 (MQ=255)
aaGTTGTCTGGTAACAGGCGCAGATGGCGACGAGCAGTGGTTTGATGGTTTGCCCTGGTATTTGACCGATCTCCGACCGCAGGGCTTTTTAGGGCGCGCGTGGGGCAGGAAGTTAGCCGCGCAACTGAATctgactga < 1:563430/138‑1 (MQ=255)
cAGGCGCAGATGGCGACGAGCAGTGGTTTGATGGTTTGCCCTGGTATTTGACCGATCTCCGACCGCAGGGCTTTTTAGGGCGCGCGTGGGGCAGGAAGTTAGCCGCGCAACTGAATCTGACTGATGATATACGTctct < 1:227592/138‑1 (MQ=255)
aGGCGCAGATGGCGACGAGCAGTGGTTTGATGGTTTGCCCTGGTATTTGACCGATCTCCGACCGCAGGGCTTTTTAGGGCGCGCGTGGGGCAGGAAGTTAGCCGCGCAACTGAATCTGACTGATGATATACGTCTCTg > 2:139696/1‑138 (MQ=255)
aGGCGCAGATGGCGACGAGCAGTGGTTTGATGGTTTGCCCTGGTATTTGACCGATCTCCGACCGCAGGGCTTTTTAGGGCGCGCGTGGGGCAGGAAGTTAGCCGCGCAACTGAATCTGACTGATGATATACGTCTCTg < 2:1769165/138‑1 (MQ=255)
aGGCGCAGATGGCGACGAGCAGTGGTTTGATGGTTTGCCCTGGTATTTGACCGATCTCCGACCGCAGGGCTTTTTAGGGCGCGCGTGGGGCAGGAAGTTAGCCGCGCAACTGAATCTGACTGATGATATACGTCTCTg > 1:1645787/1‑138 (MQ=255)
cgcAGATGGCGACGAGCAGTGGTTTGATGGTTTGCCCTGGTATTTGACCGATCTCCGACCGCAGGGCTTTTTAGGGCGCGCGTGGGGCAGGAAGTTAGCCGCGCAACTGAATCTGACTGATGATATACGTCTCTGGCa > 1:787672/1‑138 (MQ=255)
gcAGATGGCGACGAGCAGTGGTTTGATGGTTTGCCCTGGTATTTGACCGATCTCCGACCGCAGGGCTTTTTAGGGCGCGCGTGGGGCAGGAAGTTAGCCGCGCAACTGAATCTGACTGATGATATACGt > 1:1248814/1‑129 (MQ=255)
gATGGCGACGAGCAGTGGTTTGATGGTTTGCCCTGGTATTTGACCGATCTCCGACCGCAGGGCTTTTTAGGGCGCGCGTGGGGCAGGAAGTTAGCCGCGCAACTGAATCTGACTGATGATATACGTctct > 1:250660/1‑130 (MQ=255)
gATGGCGACGAGCAGTGGTTTGATGGTTTGCCCTGGTATTTGACCGATCTCCGACCGCAGGGCTTTTTAGGGCGCGCGTGGGGCAGGAAGTTAGCCGCGCAACTGAATCTGACTGATGATATACGTCTCTGGCAGgaa > 1:1080944/1‑138 (MQ=255)
tGGCGACGAGCAGTGGTTTGATGGTTTGCCCTGGTATTTGACCGATCTCCGACCGCAGGGCTTTTTAGGGCGCGCGTGGGGCAGGAAGTTAGCCGCGCAACTGAATCTGACTGATGATATACGTCTCTGGCAGgaaga < 1:6969/138‑1 (MQ=255)
tGGCGACGAGCAGTGGTTTGATGGTTTGCCCTGGTATTTGACCGATCTCCGACCGCAGGGCTTTTTAGGGCGCGCGTGGGGCAGGAAGTTAGCCGCGCAACTGAATCTGACTGATGATATACGTCTCTGGCAGgaaga < 1:707510/138‑1 (MQ=255)
gCGACGAGCAGTGGTTTGATGGTTTGCCCTGGTATTTGACCGATCTCCGACCGCAGGGCTTTTTAGGGCGCGCGTGGGGCAGGAAGTTAGCCGCGCAACTGAATCTGACTGATGATATACGTCTCTGGCAGGaagaag < 2:1645787/138‑1 (MQ=255)
cgacgaGCAGTGGTTTGATGGTTTGCCCTGGTATTTGACCGATCTCCGACCGCAGGGCTTTTTAGGGCGCGCGTGGGGCAGGAAGTTAGCCGCGCAACTGAATCTGACTGATGATATACGTCTCTGGCAGGAagaaga < 2:1397860/138‑1 (MQ=255)
acgaGCAGTGGTTTGATGGTTTGCCCTGGTATTTGACCGATCTCCGACCGCAGGGCTTTTTAGGGCGCGCGTGGGGCAGGAAGTTAGCCGCGCAACTGAATCTGACTGATGATATACGTCTCTGGCAGGAAGAAGAtg > 2:219104/1‑138 (MQ=255)
acgaGCAGTGGTTTGATGGTTTGCCCTGGTATTTGACCGATCTCCGACCGCAGGGCTTTTTAGGGCGCGCGTGGGGCAGGAAGTTAGCCGCGCAACTGAATCTGACTGATGATATACGTCTCTGGCAGGAAGAAGAtg > 1:293335/1‑138 (MQ=255)
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CTGCGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAACAGTGGTTTGATGGTTTGCCCTGGTATTTGACCGATCTCCGACCGCAGGGCTTTTTAGGGCGCGCGTGGGGCAGGAAGTTAGCCGCGCAACTGAATCTGACTGATGATATACGTCTCTGGCAGGAAGAAGATG > NC_000913/4621925‑4622192
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
