Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A6 F28 I1 R1 191 83.5 2830284 99.3% 2810472 139.1

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 2,290,997 A→G A166A (GCA→GCG)  narP → DNA‑binding transcriptional dual regulator NarP

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,290,9970AG100.0% 253.5 / NA 69A166A (GCA→GCG) narPDNA‑binding transcriptional dual regulator NarP
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base G (30/39);  total (30/39)

CCGGAGCGAAAGGCAGCAAAGTCTTTAGCGAACGCGTCAATCAGTACTTACGTGAACGTGAAATGTTTGGCGCGGAAGAAGATCCCTTCAGCGTGCTGACGGAGCGCGAGCTGGATGTTCTGCACGAGCTGGCACAGGGGCTGTCAAATAAACAGATTGCCTCGGTGTTGAATATTTCCGAGCAGACAGTAAAAGTACATATTCGCAATCTGCTGCGTAAACTCAATGTCCGCTCACGCGTGGCGGCCACCATTCTGTTCCTGCAACA  >  NC_000913/2290864‑2291131
                                                                                                                                     |                                                                                                                                      
ccGGAGCGAAAGGCAGCAAAGTCTTTAGCGAACGCGTCAATCAGTACTTACGTGAACGTGAAATGTTTGGCGCGGAAGAAGATCCCTTCAGCGTGCTGACGGAGCGCGAGCTGGATGTTCTGCACGAGCTGGCGCAgggg                                                                                                                                  <  1:424651/140‑1 (MQ=255)
  ggAGCGAAAGGCAGCAAAGTCTTTAGCGAACGCGTCAATCAGTACTTACGTGAACGTGAAATGTTTGGCGCGGAAGAAGATCCCTTCAGCGTGCTGACGGAGCGCGAGCTGGATGTTCTGCACGAGCTGGCGCAGGGGCt                                                                                                                                <  2:970173/140‑1 (MQ=255)
  ggAGCGAAAGGCAGCAAAGTCTTTAGCGAACGCGTCAATCAGTACTTACGTGAACGTGAAATGTTTGGCGCGGAAGAAGATCCCTTCAGCGTGCTGACGGAGCGCGAGCTGGATGTTCTGCACGAGCTGGCGCAGGGGCt                                                                                                                                <  1:689990/140‑1 (MQ=255)
  ggAGCGAAAGGCAGCAAAGTCTTTAGCGAACGCGTCAATCAGTACTTACGTGAACGTGAAATGTTTGGCGCGGAAGAAGATCCCTTCAGCGTGCTGACGGAGCGCGAGCTGGATGTTCTGCACGAGCTGGCGCAGGGGCt                                                                                                                                <  2:671469/140‑1 (MQ=255)
    aGCGAAATGCAGCAAAGTCTTTAGCGAACGCGTCAATCAGTACTTACGTGAACGTGACATGTTTGGCGCGGAAGAAGATCCCTTCAGCGTGCTGACGGACCGCGAGCTGGACGTTCTGCACGAGCTGGCGCAGCGGCTgg                                                                                                                              >  2:240392/1‑139 (MQ=255)
    aGCGAAAGGCAGCAAAGTCTTTAGCGAACGCGTCAATCAGTACTTACGTGAACGTGAAATGTTTGGCGCGGAAGAAGATCCCTTCAGCGTGCTGACGGAGCGCGAGCTGGATGTTCTGCACGAGCTGGCGCAGGGGCTGt                                                                                                                              >  1:304106/1‑140 (MQ=255)
           ggCAGCAAAGTCTTTAGCGAACGCGTCAATCAGTACTTACGTGAACGTGAAATGTTTGGCGCGGAAGAAGATCCCTTCAGCGTGCTGACGGAGCGCGAGCTGGATGTTCTGCACGAGCTGGCGCAGGGGCTGTCAAATaa                                                                                                                       <  1:870664/140‑1 (MQ=255)
                caAAGTCTTTAGCGAACGCGTCAATCAGTACTTACGTGAACGTGAAATGTTTGGCGCGGAAGAAGATCCCTTCAGCGTGCTGACGGAGCGCGAGCTGGATGTTCTGCACGAGCTGGCGCAGGGGCTGTCAAATAAACa                                                                                                                    <  2:742111/138‑1 (MQ=255)
                caAAGTCTTTAGCGAACGCGTCAATCAGTACTTACGTGAACGTGAAATGTTTGGCGCGGAAGAAGATCCCTTCAGCGTGCTGACGGAGCGCGAGCTGGATGTTCTGCACGAGCTGGCGCAGGGGCTGTCAAATAAACa                                                                                                                    >  1:742111/1‑138 (MQ=255)
                     tCTTTAGCGAACGCGTCAATCAGTACTTACGTGAACGTGAAATGTTTGGCGCGGAAGAAGATCCCTTCAGCGTGCTGACGGAGCGCGAGCTGGATGTTCTGCACGAGCTGGCGCAGGGGCTGTCAAATAAACAGATTGcc                                                                                                             >  2:680610/1‑140 (MQ=255)
                      cTTTAGCGAACGCGTCAATCAGTACTTACGTGAACGTGAAATGTTTGGCGCGGAAGAAGATCCCTTCAGCGTGCTGACGGAGCGCGAGCTGGATGTTCTGCACGAGCTGGCGCAGGGGCTGTCAAATAAACAGATTGCCt                                                                                                            <  1:680610/140‑1 (MQ=255)
                      cTTTAGCGAACGCGTCAATCAGTACTTACGTGAACGTGAAATGTTTGGCGCGGAAGAAGATCCCTTCAGCGTGCTGACGGAGCGCGAGCTGGATGTTCTGCACGAGCTGGCGCAGGGGCTGTCAAATAAACAGATTGCCt                                                                                                            <  1:971705/140‑1 (MQ=255)
                      cTTTAGCGAACGCGTCAATCAGTACTTACGTGAACGTGAAATGTTTGGCGCGGAAGAAGATCCCTTCAGCGTGCTGACGGAGCGCGAGCTGGATGTTCTGCACGAGCTGGCGCAGGGGCTGTCAAATAAACAGATTGCCt                                                                                                            <  1:696441/140‑1 (MQ=255)
                      cTTTAGCGAACGCGTCAATCAGTACTTACGTGAACGTGAAATGTTTGGCGCGGAAGAAGATCCCTTCAGCGTGCTGACGGAGCGCGAGCTGGATGTTCTGCACGAGCTGGCGCAGGGGCTGTCAAATAAACAGATTGCCt                                                                                                            <  2:729507/140‑1 (MQ=255)
                      cTTTAGCGAACGCGTCAATCAGTACTTACGTGAACGTGAAATGTTTGGCGCGGAAGAAGATCCCTTCAGCGTGCTGACGGAGCGCGAGCTGGATGTTCTGCACGAGCTGGCGCAGGGGCTGTCAAATAAACAGATTGCCt                                                                                                            <  1:477354/140‑1 (MQ=255)
                        ttAGCGAACGCGTCAATCAGTACTTACGTGAACGTGAAATGTTTGGCGCGGAAGAAGATCCCTTCAGCGTGCTGACGGAGCGCGAGCTGGATGTTCTGCACGAGCTGGCGCAGGGGCTGTCAAATAAACAGATTGCCTCg                                                                                                          <  2:370649/140‑1 (MQ=255)
                           gCGAACGCGTCAATCAGTACTTACGTGAACGTGAAATGTTTGGCGCGGAAGAAGATCCCTTCAGCGTGCTGACGGAGCGCGAGCTGGATGTTCTGCACGAGCTGGCGCAGGGGCTGTCAAATAAACAGATTGCCTCGgtg                                                                                                       <  2:338326/140‑1 (MQ=255)
                           gCGAACGCGTCAATCAGTACTTACGTGAACGTGAAATGTTTGGCGCGGAAGAAGATCCCTTCAGCGTGCTGACGGAGCGCGAGCTGGATGTTCTGCACGAGCTGGCGCAGGGGCTGTCAAATAAACAGATTGCCTCGgtg                                                                                                       <  1:663895/140‑1 (MQ=255)
                                cgcgTCAATCAGTACTTACGTGAACGTGAAATGTTTGGCGCGGAAGAAGATCCCTTCAGCGTGCTGACGGAGCGCGAGCTGGATGTTCTGCACGAGCTGGCGCAGGGGCTGTCAAATAAACAGATTGCCTCGGTGTTGaa                                                                                                  >  1:509046/1‑140 (MQ=255)
                                            tACTTACGTGAACGTGAAATGTTTGGCGCGGAAGAAGATCCCTTCAGCGTGCTGACGGAGCGCGAGCTGGATGTTCTGCACGAGCTGGCGCAGGGGCTGTCAAATAAACAGATTGCCTCGGTGTTGAATATTTCCGAGCa                                                                                      <  1:293671/140‑1 (MQ=255)
                                            tACTTACGTGAACGTGAAATGTTTGGCGCGGAAGAAGATCCCTTCAGCGTGCTGACGGAGCGCGAGCTGGATGTTCTGCACGAGCTGGCGCAGGGGCTGTCAAATAAACAGATTGCCTCGGTGTTGAATATTTCCGAGCa                                                                                      >  1:1097724/1‑140 (MQ=255)
                                               ttACGTGAACGTGAAATGTTTGGCGCGGAAGAAGATCCCTTCAGCGTGCTGACGGAGCGCGAGCTGGATGTTCTGCACGAGCTGGCGCAGGGGCTGTCAAATAAACAGATTGCCTCGGTGTTGAATATTTCCGAGCAGAc                                                                                   <  1:400385/140‑1 (MQ=255)
                                               ttACGTGAACGTGAAATGTTTGGCGCGGAAGAAGATCCCTTCAGCGTGCTGACGGAGCGCGAGCTGGATGTTCTGCACGAGCTGGCGCAGGGGCTGTCAAATAAACAGATTGCCTCGGTGTTGAATATTTCCGAGCAGAc                                                                                   <  1:261365/140‑1 (MQ=255)
                                               ttACGTGAACGTGAAATGTTTGGCGCGGAAGAAGATCCCTTCAGCGTGCTGACGGAGCGCGAGCTGGATGTTCTGCACGAGCTGGCGCAGGGGCTGTCAAATAAACAGATTGCCTCGGTGTTGAATATTTCCGAGCAGAc                                                                                   <  1:524480/140‑1 (MQ=255)
                                               ttACGTGAACGTGAAATGTTTGGCGCGGAAGAAGATCCCTTCAGCGTGCTGACGGAGCGCGAGCTGGATGTTCTGCACGAGCTGGCGCAGGGGCTGTCAAATAAACAGATTGCCTCGGTGTTGAATATTTCCGAGCAGAc                                                                                   <  1:854769/140‑1 (MQ=255)
                                               ttACGTGAACGTGAAATGTTTGGCGCGGAAGAAGATCCCTTCAGCGTGCTGACGGAGCGCGAGCTGGATGTTCTGCACGAGCTGGCGCAGGGGCTGTCAAATAAACAGATTGCCTCGGTGTTGAATATTTCCGAGCAGAc                                                                                   <  1:883941/140‑1 (MQ=255)
                                               ttACGTGAACGTGAAATGTTTGGCGCGGAAGAAGATCCCTTCAGCGTGCTGACGGAGCGCGAGCTGGATGTTCTGCACGAGCTGGCGCAGGGGCTGTCAAATAAACAGATTGCCTCGGTGTTGAATATTTCCGAGCAGAc                                                                                   <  2:575796/140‑1 (MQ=255)
                                                 acgtgaacgtgaAATGTTTGGCGCGGAAGAAGATCCCTTCAGCGTGCTGACGGAGCGCGAGCTGGATGTTCTGCACGAGCTGGCGCAGGGGCTGTCAAATAAACAGATTGCCTCGGTGTTGAATATTTCCGAGCAGACAg                                                                                 >  2:809128/1‑140 (MQ=255)
                                                  cgtgaacgtgaaATGTTTGGCGCGGAAGAAGATCCCTTCAGCGTGCTGACGGAGCGCGAGCTGGATGTTCTGCACGAGCTGGCGCAGGGGCTGTCAAATAAACAGATTGCCTCGGTGTTGAata                                                                                                <  1:71099/124‑1 (MQ=255)
                                                  cgtgaacgtgaaATGTTTGGCGCGGAAGAAGATCCCTTCAGCGTGCTGACGGAGCGCGAGCTGGATGTTCTGCACGAGCTGGCGCAGGGGCTGTCAAATAAACAGATTGCCTCGGTGTTGAata                                                                                                >  2:71099/1‑124 (MQ=255)
                                                  cgtgaacgtgaaATGTTTGGCGCGGAAGAAGATCCCTTCAGCGTGCTGACGGAGCGCGAGCTGGATGTTCTGCACGAGCTGGCGCAGGGGCTGTCAAATAAACAGATTGCCTCGGTGTTGAATATTTCCGAGCAGACAGt                                                                                <  2:1078627/140‑1 (MQ=255)
                                                  cgtgaacgtgaaATGTTTGGCGCGGAAGAAGATCCCTTCAGCGTGCTGACGGAGCGCGAGCTGGATGTTCTGCACGAGCTGGCGCAGGGGCTGTCAAATAAACAGATTGCCTCGGTGTTGAATATTTCCGAGCAGACAGt                                                                                <  2:945487/140‑1 (MQ=255)
                                                      aacgtgaaATGTTTGGCGCGGAAGAAGATCCCTTCAGCGTGCTGACGGAGCGCGAGCTGGATGTTCTGCACGAGCTGGCGCAGGGGCTGTCAAATAAACAGATTGCCTCGGTGTTGAATATTTCCGAGCAGa                                                                                    >  1:703053/1‑132 (MQ=255)
                                                      aacgtgaaATGTTTGGCGCGGAAGAAGATCCCTTCAGCGTGCTGACGGAGCGCGAGCTGGATGTTCTGCACGAGCTGGCGCAGGGGCTGTCAAATAAACAGATTGCCTCGGTGTTGAATATTTCCGAGCAGa                                                                                    <  2:703053/132‑1 (MQ=255)
                                                      aacgtgaaATGTTTGGCGCGGAAGAAGATCCCTTCAGCGTGCTGACGGAGCGCGAGCTGGATGTTCTGCACGAGCTGGCGCAGGGGCTGTCAAATAAACAGATTGCCTCGGTGTTGAATATTTCCGAGCAGACAGTaaaa                                                                            >  2:301878/1‑140 (MQ=255)
                                                      aacgtgaaATGTTTGGCGCGGAAGAAGATCCCTTCAGCGTGCTGACGGAGCGCGAGCTGGATGTTCTGCACGAGCTGGCGCAGGGGCTGTCAAATAAACAGATTGCCTCGGTGTTGAATATTTCCGAGCAGACAGTaaaa                                                                            >  1:703026/1‑140 (MQ=255)
                                                      aacgtgaaATGTTTGGCGCGGAAGAAGATCCCTTCAGCGTGCTGACGGAGCGCGAGCTGGATGTTCTGCACGAGCTGGCGCAGGGGCTGTCAAATAAACAGATTGCCTCGGTGTTGAATATTTCCGAGCAGACAGTaaaa                                                                            >  1:871324/1‑140 (MQ=255)
                                                      aacgtgaaATGTTTGGCGCGGAAGAAGATCCCTTCAGCGTGCTGACGGAGCGCGAGCTGGATGTTCTGCACGAGCTGGCGCAGGGGCTGTCAAATAAACAGATTGCCTCGGTGTTGAATATTTCCGAGCAGACAGTaaaa                                                                            >  1:1047077/1‑140 (MQ=255)
                                                        cgtgaaATGTTTGGCGCGGAAGAAGATCCCTTCAGCGTGCTGACGGAGCGCGAGCTGGATGTTCTGCACGAGCTGGCGCAGGGGCTATCAAATAAACAGATTGCCTCGGTGTTGAATATTTCCGAGCAGACAGTAAAAGt                                                                          >  2:1096883/1‑140 (MQ=255)
                                                                 tttGGCGCGGAAGAAGATCCCTTCAGCGTGCTGACGGAGCGCGAGCTGGATGTTCTGCACGAGCTGGCGCAGGGGCTGTCAAATAAACAGATTGCCTCGGTGTTGAATATTTCCGAGCAGACAGTAAAAGTACATATTCg                                                                 >  1:461162/1‑140 (MQ=255)
                                                                         ggAAGAAGATCCCTTCAGCGTGCTGACGGAGCGCGAGCTGGATGTTCTGCACGAGCTGGCGCAGGGGCTGTCAAATAAACAGATTGCCTCGGTGTTGAATATTTCCGAGCAGACAGTAAAAGTACata                                                                     >  1:339445/1‑128 (MQ=255)
                                                                         ggAAGAAGATCCCTTCAGCGTGCTGACGGAGCGCGAGCTGGATGTTCTGCACGAGCTGGCGCAGGGGCTGTCAAATAAACAGATTGCCTCGGTGTTGAATATTTCCGAGCAGACAGTAAAAGTACata                                                                     <  2:339445/128‑1 (MQ=255)
                                                                         ggAAGAAGATCCCTTCAGCGTGCTGACGGAGCGCGAGCTGGATGTTCTGCACGAGCTGGCGCAGGGGCTGTCAAATAAACAGATTGCCTCGGTGTTGAATATTTCCGAGCAGACAGTAAAAGTACATATTCGCAATctgc                                                         <  1:1158919/140‑1 (MQ=255)
                                                                          gaagaaGATCCCTTCAGCGTGCTGACGGAGCGCGAGCTGGATGTTCTGCACGAGCTGGCGCAGGGGCTGTCAAATAAACAGATTGCCTCGGTGTTGAATATTTCCGAGCAGACAGTAAAAGTACATATTCGCAATctgct                                                        >  2:1260000/1‑140 (MQ=255)
                                                                               agaTCCCTTCAGCGTGCTGACGGAGCGCGAGCTGGATGTTCTGCACGAGCTGGCGCAGGGGCTGTCAAATAAACAGATTGCCTCGGTGTTGAATATTTCCGAGCAGACAGTAAAAGTACATATTCGCAATCTGCTGCGTa                                                   <  2:833630/140‑1 (MQ=255)
                                                                                   cccTTCAGCGTGCTGACGGAGCGCGAGCTGGATGTTCTGCACGAGCTGGCGCAGGGGCTGTCAAATAAACAGATTGCCTCGGTGTTGAATATTTCCGAGCAGACAGTAAAAGTACATATTCGCAATCTGCTGCGTAAACt                                               <  2:509046/140‑1 (MQ=255)
                                                                                     cTTCAGCGTGCTGACGGAGCGCGAGCTGGATGTTCTGCACGAGCTGGCGCAGGGGCTGTCAAATAAACAGATTGCCTCGGTGTTGAATATTTCCGAGCAGACAGTAAAAGTACATATTCGCAATCTGCTGCGTAAACTCa                                             >  2:1051310/1‑140 (MQ=255)
                                                                                     cTTCAGCGTGCTGACGGAGCGCGAGCTGGATGTTCTGCACGAGCTGGCGCAGGGGCTGTCAAATAAACAGATTGCCTCGGTGTTGAATATTTCCGAGCAGACAGTAAAAGTACATATTCGCAATCTGCTGCGTAAACTCa                                             >  1:1317211/1‑140 (MQ=255)
                                                                                       tCAGCGTGCTGACGGAGCGCGAGCTGGATGTTCTGCACGAGCTGGCGCAGGGGCTGTCAAATAAACAGATTGCCTCGGTGTTGAATATTTCCGAGCAGACAGTAAAAGTACATATTCGCAATCTGCTGCGTAAACTCAAt                                           >  2:1256245/1‑140 (MQ=255)
                                                                                             tGCTGACGGAGCGCGAGCTGGATGTTCTGCACGAGCTGGCGCAGGGGCTGTCAAATAAACAGATTGCCTCGGTGTTGAATATTTCCGAGCAGACAGTAAAAGTACATATTCGCAATCTGCTGCGTAAACTCAATGTCCGc                                     >  2:1226890/1‑140 (MQ=255)
                                                                                                        cgcgAGCTGGATGTTCTGCACGAGCTGGCGCAGGGGCTGTCAAATAAACAGATTGCCTCGGTGTTGAATATTTCCGAGCAGACAGTAAAAGTACATATTCGCAATCTGCTGCGTAAACTCAATGTCCGCTCACGCGTggc                          >  2:981403/1‑140 (MQ=255)
                                                                                                           gAGCTGGATGTTCTGCACGAGCTGGCGCAGGGGCTGTCAAATAAACAGATTGCCTCGGTGTTGAATATTTCCGAGCAGACAGTAAAAGTACATATTCGCAATCTGCTGCGTAAACTCAATGTCCGCTCACGCGTggcggc                       <  2:419112/140‑1 (MQ=255)
                                                                                                             gCTGGATGTTCTGCACGAGCTGGCGCAGGGGCTGTCAAATAAACAGATTGCCTCGGTGTTGAATATTTCCGAGCAGACAGTAAAAGTACATATTCGCAATCTGCTGCGTAAACTCAATGTCCGCTCACGCGTGGCGGcca                     <  2:304106/140‑1 (MQ=255)
                                                                                                                  aTGTTCTGCACGAGCTGGCGCAGGGGCTGTCAAATAAACAGATTGCCTCGGTGTTGAATATTTCCGAGCAGACAGTAAAAGTACATATTCGCAATCTGCTGCGTAAACTCAATGTCCGCTCACGCGTGGCGGCCACCAtt                <  2:704698/140‑1 (MQ=255)
                                                                                                                  aTGTTCTGCACGAGCTGGCGCAGGGGCTGTCAAATAAACAGATTGCCTCGGTGTTGAATATTTCCGAGCAGACAGTAAAAGTACATATTCGCAATCTGCTGCGTAAACTCAATGTCCGCTCACGCGTGGCGGCCACCAtt                >  1:595826/1‑140 (MQ=255)
                                                                                                                   tGTTCTGCACGAGCTGGCGCAGGGGCTGTCAAATAAACAGATTGCCTCGGTGTTGAATATTTCCGAGCAGACAGTAAAAGTACATATTCGCAATCTGCTGCGTAAACTCAATGTCCGCTCACGCGTGGCGGCCACCATTc               <  1:1101480/140‑1 (MQ=255)
                                                                                                                      tCTGCACGAGCTGGCGCAGGGGCTGTCAAATAAACAGATTGCCTCGGTGTTGAATATTTCCGAGCAGACAGTAAAAGTACATATTCGCAATCTGCTGCGTAAACTCAATGTCCGCTCACGCGTGGCGGCCACCATTCTGt            <  1:809128/140‑1 (MQ=255)
                                                                                                                       cTGCACGAGCTGGCGCAGGGGCTGTCAAATAAACAGATTGCCTCGGTGTTGAATATTTCCGAGCAGACAGTAAAAGTACATATTCGCAATCTGCTGCGTAAACTCAATGTCCGCTCACGCGTGGCGGCCACCATTCTGtt           >  1:517186/1‑140 (MQ=255)
                                                                                                                        tGCACGAGCTGGCGCAGGGGCTGTCAAATAAACAGATTGCCTCGGTGTTGAATATTTCCGAGCAGACAGTAAAAGTACATATTCGCAATCTGCTGCGTAAACTCAATGTCCGCTCACGCGTGGCGGCCACCATTCTGTTc          >  2:36300/1‑140 (MQ=255)
                                                                                                                         gCACGAGCTGGCGCAGGGGCTGTCAAATAAACAGATTGCCTCGGTGTTGAATATTTCCGAGCAGACAGTAAAAGTACATATTCGCAATCTGCTGCGTAAACTCAATGTCCGCTCACGCGTGGCGGCCACCATTCTGTTcc         >  1:1007340/1‑140 (MQ=255)
                                                                                                                           aCGAGCTGGCGCAGGGGCTGTCAAATAAACAGATTGCCTCGGTGTTGAATATTTCCGAGCAGACAGTAAAAGTACATATTCGCAATCTGCTGCGTAAACTCAATGTCCGCTCACGCGTGGCGGCCACCATTCTGTTCCTg       >  2:549346/1‑140 (MQ=255)
                                                                                                                           aCGAGCTGGCGCAGGGGCTGTCAAATAAACAGATTGCCTCGGTGTTGAATATTTCCGAGCAGACAGTAAAAGTACATATTCGCAATCTGCTGCGTAAACTCAATGTCCGCTCACGCGTGGCGGCCACCATTCTGTTCCTg       >  2:945380/1‑140 (MQ=255)
                                                                                                                           aCGAGCTGGCGCAGGGGCTGTCAAATAAACAGATTGCCTCGGTGTTGAATATTTCCGAGCAGACAGTAAAAGTACATATTCGCAATCTGCTGCGTAAACTCAATGTCCGCTCACGCGTGGCGGCCACCATTCTGTTCCTg       <  1:1051310/140‑1 (MQ=255)
                                                                                                                              aGCTGGCGCAGGGGCTGTCAAATAAACAGATTGCCTCGGTGTTGAATATTTCCGAGCAGACAGTAAAAGTACATATTCGCAATCTGCTGCGTAAACTCAATGTCCGCTCACGCGTGGTGGCCACCATTCTGTTCCTGcaa    <  2:419134/140‑1 (MQ=255)
                                                                                                                               gCTGGCGCAGGGGCTGTCAAATAAACAGATTGCCTCGGTGTTGAATATTTCCGAGCAGACAGTAAAAGTACATATTCGCAATCTGCTGCGTAAACTCAATGTCCGCTCACGCGTGGCGGCCACCATTCt              >  2:1034199/1‑129 (MQ=255)
                                                                                                                               gCTGGCGCAGGGGCTGTCAAATAAACAGATTGCCTCGGTGTTGAATATTTCCGAGCAGACAGTAAAAGTACATATTCGCAATCTGCTGCGTAAACTCAATGTCCGCTCACGCGTGGCGGCCACCATTCt              <  1:1034199/129‑1 (MQ=255)
                                                                                                                               gCTGGCGCAGGGGCTGTCAAATAAACAGATTGCCTCGGTGTTGAATATTTCCGAGCAGACAGTAAAAGTACATATTCGCAATCTGCTGCGTAAACTCAATGTCCGCTCACGCGTGGCGGCCACCATTCTGTTCCTGcaac   >  1:867386/1‑140 (MQ=255)
                                                                                                                               gCTGGCGCAGGGGCTGTCAAATAAACAGATTGCCTCGGTGTTGAATATTTCCGAGCAGACAGTAAAAGTACATATTCGCAATCTGCTGCGTAAACTCAATGTCCGCTCACGCGTGGCGGCCACCATTCTGTTCCTGcaac   >  1:1231174/1‑140 (MQ=255)
                                                                                                                                cTGGCGCAGGGGCTGTCAAATAAACAGATTGCCTCGGTGTTGAATATTTCCGAGCAGACAGTAAAAGTACATATTCGCAATCTGCTGCGTAAACTCAATGTCCGCTCACGCGTGGCGGCCACCATTCTGTTCCTGcaaca  <  2:595826/140‑1 (MQ=255)
                                                                                                                                cTGGCGCAGGGGCTGTCAAATAAACAGATTGCCTCGGTGTTGAATATTTCCGAGCAGACAGTAAAAGTACATATTCGCAATCTGCTGCGTAAACTCAATGTCCGCTCACGCGTGGCGGCCACCATTCTGTTCCTGcaaca  <  2:603492/140‑1 (MQ=255)
                                                                                                                                     |                                                                                                                                      
CCGGAGCGAAAGGCAGCAAAGTCTTTAGCGAACGCGTCAATCAGTACTTACGTGAACGTGAAATGTTTGGCGCGGAAGAAGATCCCTTCAGCGTGCTGACGGAGCGCGAGCTGGATGTTCTGCACGAGCTGGCACAGGGGCTGTCAAATAAACAGATTGCCTCGGTGTTGAATATTTCCGAGCAGACAGTAAAAGTACATATTCGCAATCTGCTGCGTAAACTCAATGTCCGCTCACGCGTGGCGGCCACCATTCTGTTCCTGCAACA  >  NC_000913/2290864‑2291131

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A