Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A6 F28 I1 R1	191	83.5	2830284	99.3%	2810472	139.1

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,162,320	G→A	A117V (GCA→GTA)	ftsP ←	cell division protein required during stress conditions

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,162,320	0	G	A	100.0%	290.4 / NA	83	A117V (GCA→GTA)	ftsP	cell division protein required during stress conditions
Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (44/39); total (44/39)

AGCCACATTCCGGCAAGGCCGTTATAGACCTGCTGAGCCGTGCGGTTGGGAGTATTGGCGTGATACCACAGAGTAGCTGCGTTCTGGCGAATGGGCAGTACGGGTGCCCAGTCAGCGTTTGGCGACATCATCCGTGCCGGACCGCCCATCAGCGGGCCTGGTACCTGTAGCCCGGCCACCGTCATTGAGACATTTTCTGTCAGGCGGTTGCTGTAAATAAGCTTAACATCGTCGCCCTTCCAGACGCGGATAGTCGGCCCCAGGTAACGACC  >  NC_000913/3162185‑3162456

aGCCACATTCCGGCAAGGCCGTTATAGACCTGCTGAGCCGTGCGGTTGGGAGTATTGGCGTGATACCACAGAGTAGCTGCGTTCTGGCGAATGGGCAGTACGGGTGCCCAGTCAGCGTTTGGCGACATCATCCGTACCgg                                                                                                                                      >  1:991696/1‑140 (MQ=255)

 gCCACATTCCGGCAAGGCCGTTATAGACCTGCTGAGCCGTGCGGTTGGGAGTATTGGCGTGATACCACAGAGTAGCTGCGTTCTGGCGAATGGGCAGTACGGGTGCCCAGTCAGCGTTTGGCGACATCATCCGTACCGGa                                                                                                                                     <  1:1398504/140‑1 (MQ=255)

    acaTTCCGGCAAGGCCGTTATAGACCTGCTGAGCCGTGCGGTTGGGAGTATTGGCGTGATACCACAGAGTAGCTGCGTTCTGGCGAATGGGCAGTACGGGTGCCCAGTCAGCGTTTGGCGACATCATCCGTACCGGACCg                                                                                                                                  >  2:950954/1‑140 (MQ=255)

       ttCCGGCAAGGCCGTTATAGACCTGCTGAGCCGTGCGGTTGGGAGTATTGGCGTGATACCACAGAGTAGCTGCGTTCTGGCGAATGGGCAGTACGGGTGCCCAGTCAGCGTTTGGCGACATCATCCGTACCGGACCGccc                                                                                                                               <  2:687625/140‑1 (MQ=255)

         ccGGCAAGGCCGTTATAGACCTGCTGAGCCGTGCGGTTGGGAGTATTGGCGTGATACCACAGAGTAGCTGCGTTCTGGCGAATGGGCAGTACGGGTGCCCAGTCAGCGTTTGGCGACATCATCCGTACCGGACCGccc                                                                                                                               >  1:1151487/1‑138 (MQ=255)

         ccGGCAAGGCCGTTATAGACCTGCTGAGCCGTGCGGTTGGGAGTATTGGCGTGATACCACAGAGTAGCTGCGTTCTGGCGAATGGGCAGTACGGGTGCCCAGTCAGCGTTTGGCGACATCATCCGTACCGGACCGccc                                                                                                                               <  2:1151487/138‑1 (MQ=255)

          cGGCAAGGCCGTTATAGACCTGCTGAGCCGTGCGGTTGGGAGTATTGGCGTGATACCACAGAGTAGCTGCGTTCTGGCGAATGGGCAGTACGGGTGCCCAGTCAGCGTTTGGCGACATCATCCGTACCGGACCGCCCATc                                                                                                                            >  1:1048403/1‑140 (MQ=255)

             cAAGGCCGTTATAGACCTGCTGAGCCGTGCGGTTGGGAGTATTGGCGTGATACCACAGAGTAGCTGCGTTCTGGCGAATGGGCAGTACGGGTGCCCAGTCAGCGTTTGGCGACATCATCCGTACCGGACCGCCCATCAGc                                                                                                                         <  2:886717/140‑1 (MQ=255)

              aaGGCCGTTATAGACCTGCTGAGCCGTGCGGTTGGGAGTATTGGCGTGATACCACAGAGTAGCTGCGTTCTGGCGAATGGGCAGTACGGGTGCCCAGTCAGCGTTTGGCGACATCATCCGTACCGGACCGCCCATCAGCg                                                                                                                        <  2:991696/140‑1 (MQ=255)

              aaGGCCGTTATAGACCTGCTGAGCCGTGCGGTTGGGAGTATTGGCGTGATACCACAGAGTAGCTGCGTTCTGGCGAATGGGCAGTACGGGTGCCCAGTCAGCGTTTGGCGACATCATCCGTACCGGACCGCCCATCAGCg                                                                                                                        <  2:1094337/140‑1 (MQ=255)

                ggCCGTTATAGACCTGCTGAGCCGTGCGGTTGGGAGTATTGGCGTGATACCACAGAGTAGCTGCGTTCTGGCGAATGGGCAGTACGGGTGCCCAGTCAGCGTTTGGCGACATCATCCGTACCGGACCGCCCATCAGCggg                                                                                                                      >  1:1291975/1‑140 (MQ=255)

                ggCCGTTATAGACCTGCTGAGCCGTGCGGTTGGGAGTATTGGCGTGATACCACAGAGTAGCTGCGTTCTGGCGAATGGGCAGTACGGGTGCCCAGTCAGCGTTTGGCGACATCATCCGTACCGGACCGCCCATCAGCggg                                                                                                                      >  1:685373/1‑140 (MQ=255)

                 gCCGTTATAGACCTGCTGGGCCGTGCGGTTGGGAGTATTGGCGTGATACCACAGAGTAGCTGCGTTCTGGCGAATGGGCAGTACGGGTGCCCAGTCAGCGTTTGGCGACATCATCCGTACCGGACCGCCCATCAGCGGGc                                                                                                                     <  1:184109/140‑1 (MQ=255)

                 gCCGTTATAGACCTGCTGAGCCGTGCGGTTGGGAGTATTGGCGTGATACCACAGAGTAGCTGCGTTCTGGCGAATGGGCAGTACGGGTGCCCAGTCAGCGTTTGGCGACATCATCCGTACCGGACCGCCCATCAGCGGGc                                                                                                                     <  2:571520/140‑1 (MQ=255)

                   cGTTATAGACCTGCTGAGCCGTGCGGTTGGGAGTATTGGCGTGATACCACAGAGTAGCTGCGTTCTGGCGAATGGGCAGTACGGGTGCCCAGTCAGCGTTTGGCGACATCATCCGTACCGGACCGCCCATCAGCGGGCCt                                                                                                                   <  1:1003282/140‑1 (MQ=255)

                     ttATAGACCTGCTGAGCCGTGCGGTTGGGAGTATTGGCGTGATACCACAGAGTAGCTGCGTTCTGGCGAATGGGCAGTACGGGTGCCCAGTCAGCGTTTGGCGACATCATCCGTACCGGACCGCCCATCAGCGGGCCTgg                                                                                                                 <  2:74024/140‑1 (MQ=255)

                     ttATAGACCTGCTGAGCCGTGCGGTTGGGAGTATTGGCGTGATACCACAGAGTAGCTGCGTTCTGGCGAATGGGCAGTACGGGTGCCCAGTCAGCGTTTGGCGACATCATCCGTACCGGACCGCCCATCAGCGGGCCTgg                                                                                                                 <  2:595798/140‑1 (MQ=255)

                     ttATAGACCTGCTGAGCCGTGCGGTTGGGAGTATTGGCGTGATACCACAGAGTAGCTGCGTTCTGGCGAATGGGCAGTACGGGTGCCCAGTCAGCGTTTGGCGACATCATCCGTACCGGACCGCCCATCAGCGGGCCTgg                                                                                                                 <  2:555241/140‑1 (MQ=255)

                     ttATAGACCTGCTGAGCCGTGCGGTTGGGAGTATTGGCGTGATACCACAGAGTAGCTGCGTTCTGGCGAATGGGCAGTACGGGTGCCCAGTCAGCGTTTGGCGACATCATCCGTACCGGACCGCCCATCAGCGGGCCTgg                                                                                                                 <  2:1039786/140‑1 (MQ=255)

                      tataGACCTGCTGAGCCGTGCGGTTGGGAGTATTGGCGTGATACCACAGAGTAGCTGCGTTCTGGCGAATGGGCAGTACGGGTGCCCAGTCAGCGTTTGGCGACATCATCCGTACCGGACCGCCCATCAGCGGGCCTGGt                                                                                                                <  1:1341585/140‑1 (MQ=255)

                                ctgAGCCGTGCGGTTGGGAGTATTGGCGTGATACCACAGAGTAGCTGCGTTCTGGCGAATGGGCAGTACGGGTGCCCAGTCAGCGTTTGGCGACATCATCCGTACCGGACCGCCCATCAGCGGGCCTGGTACCTGTAGcc                                                                                                      >  1:1317364/1‑140 (MQ=255)

                                ctgAGCCGTGCGGTTGGGAGTATTGGCGTGATACCACAGAGTAGCTGCGTTCTGGCGAATGGGCAGTACGGGTGCCCAGTCAGCGTTTGGCGACATCATCCGTACCGGACCGCCCATCAGCGGGCCTGGTACCTGTAGcc                                                                                                      >  2:774563/1‑140 (MQ=255)

                                ctgAGCCGTGCGGTTGGGAGTATTGGCGTGATACCACAGAGTAGCTGCGTTCTGGCGAATGGGCAGTACGGGTGCCCAGTCAGCGTTTGGCGACATCATCCGTACCGGACCGCCCATCAGCGGGCCTGGTACCTGTAGcc                                                                                                      >  1:238584/1‑140 (MQ=255)

                                       gTGCGGTTGGGAGTATTGGCGTGATACCACAGAGTAGCTGCGTTCTGGCGAATGGGCAGTACGGGTGCCCAGTCAGCGTTTGGCGACATCATCCGTACCGGACCGCCCATCAGCGGGCCTGGTACCTGTAGCCCGGCCAc                                                                                               >  1:241923/1‑140 (MQ=255)

                                       gTGCGGTTGGGAGTATTGGCGTGATACCACAGAGTAGCTGCGTTCTGGCGAATGGGCAGTACGGGTGCCCAGTCAGCGTTTGGCGACATCATCCGTACCGGACCGCCCATCAGCGGGCCTGGTACCTGTAGCCCGGCCAc                                                                                               >  1:147493/1‑140 (MQ=255)

                                        tGCGGTTGGGAGTATTGGCGTGATACCACAGAGTAGCTGCGTTCTGGCGAATGGGCAGTACGGGTGCCCAGTCAGCGTTTGGCGACATCATCCGTACCGGACCGCCCATCAGCGGGCCTGGTACCTGTAGCCCGGCCAcc                                                                                              >  1:436198/1‑140 (MQ=255)

                                        tGCGGTTGGGAGTATTGGCGTGATACCACAGAGTAGCTGCGTTCTGGCGAATGGGCAGTACGGGTGCCCAGTCAGCGTTTGGCGACATCATCCGTACCGGACCGCCCATCAGCGGGCCTGGTACCTGTAGCCCGGCCAcc                                                                                              >  2:855736/1‑140 (MQ=255)

                                                     aTTGGCGTGATACCACAGAGTAGCTGCGTTCTGGCGAATGGGCAGTACGGGTGCCCAGTCAGCGTTTGGCGACATCATCCGTACCGGACCGCCCATCAGCGGGCCTGGTACCTGTAGCCCGGCCACCGTCATTGAGACAt                                                                                 >  1:92236/1‑140 (MQ=255)

                                                     aTTGGCGTGATACCACAGAGTAGCTGCGTTCTGGCGAATGGGCAGTACGGGTGCCCAGTCAGCGTTTGGCGACATCATCCGTACCGGACCGCCCATCAGCGGGCCTGGTACCTGTAGCCCGGCCACCGTCATTGAGACAt                                                                                 >  1:470747/1‑140 (MQ=255)

                                                       tGGCGTGATACCACAGAGTAGCTGCGTTCTGGCGAATGGGCAGTACGGGTGCCCAGTCAGCGTTTGGCGACATCATCCGTACCGGACCGCCCATCAGCGGGCCTGGTACCTGTAGCCCGGCCACCGTCATTGAGACAttt                                                                               >  2:1231243/1‑140 (MQ=255)

                                                       tGGCGTGATACCACAGAGTAGCTGCGTTCTGGCGAATGGGCAGTACGGGTGCCCAGTCAGCGTTTGGCGACATCATCCGTACCGGACCGCCCATCAGCGGGCCTGGTACCTGTAGCCCGGCCACCGTCATTGAGACAttt                                                                               >  1:812692/1‑140 (MQ=255)

                                                       tGGCGTGATACCACAGAGTAGCTGCGTTCTGGCGAATGGGCAGTACGGGTGCCCAGTCAGCGTTTGGCGACATCATCCGTACCGGACCGCCCATCAGCGGGCCTGGTACCTGTAGCCCGGCCACCGTCATTGAGACAttt                                                                               >  2:991309/1‑140 (MQ=255)

                                                            tGATACCACAGAGTAGCTGCGTTCTGGCGAATGGGCAGTACGGGTGCCCAGTCAGCGTTTGGCGACATCATCCGTACCGGACCGCCCATCAGCGGGCCTGGTACCTGTAGCCCGGCCACCGTCATTGAGACATTTTCTGt                                                                          <  1:950954/140‑1 (MQ=255)

                                                            tGATACCACAGAGTAGCTGCGTTCTGGCGAATGGGCAGTACGGGTGCCCAGTCAGCGTTTGGCGACATCATCCGTACCGGACCGCCCATCAGCGGGCCTGGTACCTGTAGCCCGGCCACCGTCATTGAGACATTTTCTGt                                                                          <  2:241923/140‑1 (MQ=255)

                                                              aTACCACAGAGTAGCTGCGTTCTGGCGAATGGGCAGTACGGGTGCCCAGTCAGCGTTTGGCGACATCATCCGTACCGGACCGCCCATCAGCGGGCCTGGTACCTGTAGCCCGGCCACCGTCATTGAGACATTTTCTGTCa                                                                        >  1:575208/1‑140 (MQ=255)

                                                              aTACCACAGAGTAGCTGCGTTCTGGCGAATGGGCAGTACGGGTGCCCAGTCAGCGTTTGGCGACATCATCCGTACCGGACCGCCCATCAGCGGGCCTGGTACCTGTAGCCCGGCCACCGTCATTGAGACATTTTCTGTCa                                                                        >  2:18462/1‑140 (MQ=255)

                                                                aCCACAGAGTAGCTGCGTTCTGGCGAATGGGCAGTACGGGTGCCCAGTCAGCGTTTGGCGACATCATCCGTACCGGACCGCCCATCAGCGGGCCTGGTACCTGTAGCCCGGCCACCGTCATTGAGACATTTTCTGTCAgg                                                                      >  1:654829/1‑140 (MQ=255)

                                                                   acaGAGTAGCTGCGTTCTGGCGAATGGGCAGTACGGGTGCCCAGTCAGCGTTTGGCGACATCATCCGTACCGGACCGCCCATCAGCGGGCCTGGTACCTGTAGCCCGGCCACCGTCATTGAGACATTTTCTGTCAGGCgg                                                                   <  2:787312/140‑1 (MQ=255)

                                                                   acaGAGTAGCCGCGTTCAGGCGAATGGGCAGGACAGGTGCCAAGTCAGCGTTTGGCGACATCATCCGTACCGGACCGCCCATCAGCGGTCCTGGTTCCCGTAGTCCGGCCGCTGTCATTGAGACAGTTTCTGTCAGGCgg                                                                   <  2:475355/140‑1 (MQ=255)

                                                                    caGAGTAGCTGCGTTCTGGCGAATGGGCAGTACGGGTGCCCAGTCAGCGTTTGGCGACATCATCCGTACCGGACCGCCCATCAGCGGGCCTGGTACCTGTAGCCCGGCCACCGTCATTGAGACATTTTCTGTCAGGCGGt                                                                  <  1:1221183/140‑1 (MQ=255)

                                                                    caGAGTAGCTGCGTTCTGGCGAATGGGCAGTACGGGTGCCCAGTCAGCGTTTGGCGACATCATCCGTACCGGACCGCCCATCAGCGGGCCTGGTACCTGTAGCCCGGCCACCGTCATTGAGACATTTTCTGTCAGGCGGt                                                                  <  2:1291975/140‑1 (MQ=255)

                                                                    caGAGTAGCTGCGTTCTGGCGAATGGGCAGTACGGGTGCCCAGTCAGCGTTTGGCGACATCATCCGTACCGGACCGCCCATCAGCGGGCCTGGTACCTGTAGCCCGGCCACCGTCATTGAGACATTTTCTGTCAGGCGGt                                                                  <  2:92236/140‑1 (MQ=255)

                                                                      gagTAGCTGCGTTCTGGCGAATGGGCAGTACGGGTGCCCAGTCAGCGTTTGGCGACATCATCCGTACCGGACCGCCCATCAGCGGGCCTGGTACCTGTAGCCCGGCCACCGTCATTGAGACATTTTCt                                                                            <  2:861040/128‑1 (MQ=255)

                                                                      gagTAGCTGCGTTCTGGCGAATGGGCAGTACGGGTGCCCAGTCAGCGTTTGGCGACATCATCCGTACCGGACCGCCCATCAGCGGGCCTGGTACCTGTAGCCCGGCCACCGTCATTGAGACATTTTCt                                                                            >  1:861040/1‑128 (MQ=255)

                                                                       agTAGCTGCGTTCTGGCGAATGGGCAGTACGGGTGCCCAGTCAGCGTTTGGCGACATCATCCGTACCGGACCGCCCATCAGCGGGCCTGGTACCTGTAGCCCGGCCACCGTCATTGAGACATTTTCTGTCAGGCGGTTGc                                                               <  2:937153/140‑1 (MQ=255)

                                                                       agTAGCTGCGTTCTGGCGAATGGGCAGTACGGGTGCCCAGTCAGCGTTTGGCGACATCATCCGTACCGGACCGCCCATCAGCGGGCCTGGTACCTGTAGCCCGGCCACCGTCATTGAGACATTTTCTGTCAGGCGGTTGc                                                               >  1:769815/1‑140 (MQ=255)

                                                                        gTAGCTGCGTTCTGGCGAATGGGCAGTACGGGTGCCCAGTCAGCGTTTGGCGACATCATCCGTACCGGACCGCCCATCAGCGGGCCTGGTACCTGTAGCCCGGCCACCGTCATTGAGACATTTTCTGTCAGGCGGTTGCt                                                              >  1:296025/1‑140 (MQ=255)

                                                                         tAGCTGCGTTCTGGCGAATGGGCAGTACGGGTGCCCAGTCAGCGTTTGGCGACATCATCCGTACCGGACCGCCCATCAGCGGGCCTGGTACCTGTAGCCCGGCCACCGTCATTGAGACATTTTCTGTCAGGCGGTTGCTg                                                             >  2:149691/1‑140 (MQ=255)

                                                                          aGCTGCGTTCTGGCGAATGGGCAGTACGGGTGCCCAGTCAGCGTTTGGCGACATCATCCGTACCGGACCGCCCATCAGCGGGCCTGGTACCTGTAGCCCGGCCACCGTCATTGAGACATTTTCTGTCAGGCGGTTGCTGt                                                            >  2:1198698/1‑140 (MQ=255)

                                                                           gCTGCGTTCTGGCGAATGGGCAGTACGGGTGCCCAGTCAGCGTTTGGCGACATCATCCGTACCGGACCGCCCATCAGCGGGCCTGGTACCTGTAGCCCGGCCACCGTCATTGAGACATTTTCTGTCAGGCGGTTGCTGTa                                                           >  1:1362033/1‑140 (MQ=255)

                                                                            cTGCGTTCTGGCGAATGGGCAGTACGGGTGCCCAGTCAGCGTTTGGCGACATCATCCGTACCGGACCGCCCATCAGCGGGCCTGGTACCTGTAGCCCGGCCACCGTCATTGAGACATTTTCTGTCAGGCGGTTGCTGTaa                                                          >  2:1015230/1‑140 (MQ=255)

                                                                            cTGCGTTCTGGCGAATGGGCAGTACGGGTGCCCAGTCAGCGTTTGGCGACATCATCCGTACCGGACCGCCCATCAGCGGGCCTGGTACCTGTAGCCCGGCCACCGTCATTGAGACATTTTCTGTCAGGCGGTTGCTGTaa                                                          >  2:946254/1‑140 (MQ=255)

                                                                            cTGCGTTCTGGCGAATGGGCAGTACGGGTGCCCAGTCAGCGTTTGGCGACATCATCCGTACCGGACCGCCCATCAGCGGGCCTGGTACCTGTAGCCCGGCCACCGGCATTGAGACATTTTCTGTCAGGCGGTTGCTGTaa                                                          >  2:90790/1‑140 (MQ=255)

                                                                             tGCGTTCTGGCGAATGGGCAGTACGGGTGCCCAGTCAGCGTTTGGCGACATCATCCGTACCGGACCGCCCATCAGCGGGCCTGGTACCTGTAGCCCGGCCACCGTCATTGAGACATTTTCTGTCAGGCGGTTGCTGTaaa                                                         <  2:685373/140‑1 (MQ=255)

                                                                              gCGTTCTGGCGAATGGGCAGTACGGGTGCCCAGTCAGCGTTTGGCGACATCATCCGTACCGGACCGCCCATCAGCGGGCCTGGTACCTGTAGCCCGGCCACCGTCATTGAGACATTTTCTGTCAGGCGGTTGCTGTAAAt                                                        <  1:1288185/140‑1 (MQ=255)

                                                                                 ttCTGGCGAATGGGCAGTACGGGTGCCCAGTCAGCGTTTGGCGACATCATCCGTACCGGACCGCCCATCAGCGGGCCTGGTACCTGTAGCCCGGCCACCGTCATTGAGACATTTTCTGTCAGGCGGTTGCTGTAAATAAg                                                     >  1:1069308/1‑140 (MQ=255)

                                                                                 ttCTGGCGAATGGGCAGTACGGGTGCCCAGTCAGCGTTTGGCGACATCATCCGTACCGGACCGCCCATCAGCGGGCCTGGTACCTGTAGCCCGGCCACCGTCATTGAGACATTTTCTGTCAGGCGGTTGCTGTAAATAAg                                                     >  1:587331/1‑140 (MQ=255)

                                                                                     ggCGAATGGGCAGTACGGGTGCCCAGTCAGCGTTTGGCGACATCATCCGTACCGGACCGCCCATCAGCGGGCCTGGTACCTGTAGCCCGGCCACCGTCATTGAGACATTTTCTGTCAGGCGGTTGCTGTAAATAAGCTTa                                                 >  1:714521/1‑140 (MQ=255)

                                                                                      gCGAATGGGCAGTACGGGTGCCCAGTCAGCGTTTGGCGACATCATCCGTACCGGACCGCCCATCAGCGGGCCTGGTACCTGTAGCCCGGCCACCGTCATTGAGACATTTTCTGTCAGGCGGTTGCTGTAAATAAGCTTaa                                                <  1:1198698/140‑1 (MQ=255)

                                                                                      gCGAATGGGCAGTACGGGTGCCAAGTCAGCGTTTGGCGACATCATCCGTACCGGACCGCCCATCAGCGGGCCTGGTACCTGTAGCCCGGCCACCGTCATTGAGACATTTTCTGTCAGGCGGTTGCTGTAAATAAGCTTaa                                                >  2:127366/1‑140 (MQ=255)

                                                                                         aaTGGGCAGTACGGGTGCCCAGTCAGCGTTTGGCGACATCATCCGTACCGGACCGCCCATCAGCGGGCCTGGTACCTGTAGCCCGGCCACCGTCATTGAGACATTTTCTGTCAGGCGGTTGCTGTAAATAAGCTTAACAt                                             <  1:398615/140‑1 (MQ=255)

                                                                                            gggCAGTACGGGTGCCCAGTCAGCGTTTGGCGACATCATCCGTACCGGACCGCCCATCAGCGGGCCTGGTACCTGTAGCCCGGCCACCGTCATTGAGACATTTTCTGTCAGGCGGTTGCTGTAAATAAGCTTAACAtcgt                                          <  2:654829/140‑1 (MQ=255)

                                                                                                aGTACGGGTGCCAAGTCAGCGTTTGGCGACATCATCCGTACCGGACCGCCCATCAGCGGGCCTGGTACCTGTAGCCCGGCCACCGTCATTGAGACATTTTCTGTCAGGCGGTTGCTGTAAATAAGCTTAACATCGTCGcc                                      <  1:127366/140‑1 (MQ=255)

                                                                                                       gTGCCCAGTCAGCGTTTGGCGACATCATCCGTACCGGACCGCCCATCAGCGGGCCTGGTACCTGTAGCCCGGCCACCGTCATTGAGACATTTTCTGTCAGGCGGTTGCTGTAAATAAGCTTAACATCGTCGCCCTTCCAg                               >  2:625250/1‑140 (MQ=255)

                                                                                                        tGCCCAGTCAGCGTTTGGCGACATCATCCGTACCGGACCGCCCATCAGCGGGCCTGGTACCTGTAGCCCGGCCACCGTCATTGAGACATTTTCTGTCAGGCGGTTGCTGTAAATAAGCTTAACATCGTCGCCCTTCCAGa                              <  2:575208/140‑1 (MQ=255)

                                                                                                            cAGTCAGCGTTTGGCGACATCATCCGTACCGGACCGCCCATCAGCGGGCCTGGTACCTGTAGCCCGGCCACCGTCATTGAGACATTTTCTGTCAGGCGGTTGCTGTAAATAAGCTTAACATCGTCGCCCTTCCAGAcgcg                          >  1:731789/1‑140 (MQ=255)

                                                                                                            cAGTCAGCGTTTGGCGACATCATCCGTACCGGACCGCCCATCAGCGGGCCTGGTACCTGTAGCCCGGCCACCGTCATTGAGACATTTTCTGTCAGGCGGTTGCTGTAAATAAGCTTAACATCGTCGCCCTTCCAGAcgcg                          >  2:1363901/1‑140 (MQ=255)

                                                                                                            cAGTCAGCGTTTGGCGACATCATCCGTACCGGACCGCCCATCAGCGGGCCTGGTACCTGTAGCCCGGCCACCGTCATTGAGACATTTTCTGTCAGGCGGTTGCTGTAAATAAGCTTAACATCGTCGCCCTTCCAGAcgcg                          >  1:1201525/1‑140 (MQ=255)

                                                                                                             aGTCAGCGTTTGGCGACATCATCCGTACCGGACCGCCCATCAGCGGGCCTGGTACCTGTAGCCCGGCCACCGTCATTGAGACATTTTCTGTCAGGCGGTTGCTGTAAATAAGCTTAACATCGTCGCCCTTCCAGACGCgg                         <  2:436198/140‑1 (MQ=255)

                                                                                                              gTCAGCGTTTGGCGACATCATCCGTACCGGACCGCCCATCAGCGGGCCTGGTACCTGTAGCCCGGCCACCGTCATTGAGACATTTTCTGTCAGGCGGTTGCTGTAAATAAGCTTAACATCGTCGCCCTTCCAGACGCGGa                        <  1:991309/140‑1 (MQ=255)

                                                                                                                cAGCGTTTGGCGACATCATCCGTACCGGACCGCCCATCAGCGGGCCTGGTACCTGTAGCCCGGCCACCGTCATTGAGACATTTTCTGTCAGGCGGTTGCTGTAAATAAGCTTAACATCGTCGCCCTTCCAGACGCGGATa                      >  2:603414/1‑140 (MQ=255)

                                                                                                                  gCGTTTGGCGACATCATCCGTACCGGACCGCCCATCAGCGGGCCTGGTACCTGTAGCCCGGCCACCGTCATTGAGACATTTTCTGTCAGGCGGTTGCTGTAAATAAGCTTAACATCGTCGCCCTTCCAGACGCGGATAGt                    <  1:1015230/140‑1 (MQ=255)

                                                                                                                  gCGTTTGGCGACATCATCCGTACCGGACCGCCCATCAGCGGGCCTGGTACCTGTAGCCCGGCCACCGTCATTGAGACATTTTCTGTCAGGCGGTTGCTGTAAATAAGCTTAACATCGTCGCCCTTCCAGACGCGGATAGt                    <  1:149691/140‑1 (MQ=255)

                                                                                                                  gCGTTTGGCGACATCATCCGTACCGGACCGCCCATCAGCGGGCCTGGTACCTGTAGCCCGGCCACCGTCATTGAGACATTTTCTGTCAGGCGGTTGCTGTAAATAAGCTTAACATCGTCGCCCTTCCAGACGCGGATAGt                    <  1:572906/140‑1 (MQ=255)

                                                                                                                         gCGACATCATCCGTACCGGACCGCCCATCAGCGGGCCTGGTACCTGTAGCCCGGCCACCGTCATTGAGACATTTTCTGTCAGGCGGTTGCTGTAAATAAGCTTAACATCGTCGCCCTTCCAGACGCGGATAGTCGGcccc             <  2:1048403/140‑1 (MQ=255)

                                                                                                                             catcatCCGTACCGGACCGCCCATCAGCGGGCCTGGTACCTGTAGCCCGGCCACCGTCATTGAGACATTTTCTGTCAGGCGGTTGCTGTAAATAAGCTTAACATCGTCGCCCTTCCAGACGCGGATAGTCGGCCCCAGGt         >  2:1333280/1‑140 (MQ=255)

                                                                                                                             catcatCCGTACCGGACCGCCCATCAGCGGGCCTGGTACCTGTAGCCCGGCCACCGTCATTGAGACATTTTCTGTCAGGCGGTTGCTGTAAATAAGCTTAACATCGTCGCCCTTCCAGACGCGGATAGTCGGCCCCAGGt         >  1:426889/1‑140 (MQ=255)

                                                                                                                               tcatcCGTACCGGACCGCCCATCAGCGGGCCTGGTACCTGTAGCCCGGCCACCGTCATTGAGACATTTTCTGTCAGGCGGTTGCTGTAAATAAGCTTAACATCGTCGCCCTTCCAGACGCGGATAGTCGGCCCCAGGTaa       <  1:774563/140‑1 (MQ=255)

                                                                                                                                catcTGTACCGGACCGCCCATCAGCGGGCCTGGTACCTGTAGCCCGGCCACCGTCATTGAGACATTTTCTGTCAGGCGGTTGCTGTAAATAAGCTTAACATCGTCGCCCTTCCAGACGCGGATAGTCGGCCCCAGGTAAc      >  1:157042/1‑140 (MQ=255)

                                                                                                                                catcCGTACCGGACCGCCCATAAGCGGGCCTGGTACCTGTAGCCCGGCCACCGTCATTGAGACATTTTCTGTCAGGCGGTTGCTGTAAATAAGCTTAACATCGTCGCCCTTCCAGACGCGGATAGTCGGCCCCAGGTAAc      >  2:1003440/1‑140 (MQ=255)

                                                                                                                                   ccGTACCGGACCGCCCATCAGCGGGCCTGGTACCTGTAGCCCGGCCACCGTCATTGAGACATTTTCTGTCAGGCGGTTGTTGTAAATAAGCTTAACATCGTCGCCCTTCCAGACGCGGATAGt                    <  1:948479/123‑1 (MQ=255)

                                                                                                                                   ccGTACCGGACCGCCCATCAGCGGGCCTGGTACCTGTAGCCCGGCCACCGTCATTGAGACATTTTCTGTCAGGCGGTTGTTGTAAATAAGCTTAACATCGTCGCCCTTCCAGACGCGGATAGt                    >  2:948479/1‑123 (MQ=255)

                                                                                                                                   ccGTACCGGACCGCCCATCAGCGGGCCTGGTACCTGTAGCCCGGCCACCGTCATTGAGACATTTTCTGTCAGGCGGTTGCTGTAAATAAGCTTAACATCGTCGCCCTTCCAGACGCGGATAGTCGGCCCCAGGTAACGAc   <  1:90790/140‑1 (MQ=255)

                                                                                                                                    cGTACCGGACCGCCCATCAGCGGGCCTGGTACCTGTAGCCCGGCCACCGTCATTGAGACATTTTCTGTCAGGCGGTTGCTGTAAATAAGCTTAACATCGTCGCCCTTCCAGACGCGGATAGTCGGCCCCAGGTAACGAcc  <  2:470747/140‑1 (MQ=255)

AGCCACATTCCGGCAAGGCCGTTATAGACCTGCTGAGCCGTGCGGTTGGGAGTATTGGCGTGATACCACAGAGTAGCTGCGTTCTGGCGAATGGGCAGTACGGGTGCCCAGTCAGCGTTTGGCGACATCATCCGTGCCGGACCGCCCATCAGCGGGCCTGGTACCTGTAGCCCGGCCACCGTCATTGAGACATTTTCTGTCAGGCGGTTGCTGTAAATAAGCTTAACATCGTCGCCCTTCCAGACGCGGATAGTCGGCCCCAGGTAACGACC  >  NC_000913/3162185‑3162456

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

N/A