Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A6 F28 I1 R1
|
191 |
83.5 |
2830284 |
99.3% |
2810472 |
139.1 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,629,190 |
A→G |
F117L (TTC→CTC) |
rbbA ← |
ribosome‑associated ATPase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,629,190 | 0 | A | G | 98.7%
| 284.4
/ ‑4.8
| 79 | F117L (TTC→CTC) | rbbA | ribosome‑associated ATPase |
| Reads supporting (aligned to +/- strand): ref base A (0/1); new base G (34/44); total (34/45) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01 |
ACGCGCAGCACAGCCCAAGTTTTTGCTTCATCCCGCCGGAGAGTTTCCCTGCCGGACGATCGCGAAACGGTGCTAACCCGGTGCTGGTCAGCAGCTCATTGATTCGCACTTCCCGCTCCGCTTTGTCGTGACCGAACAGGCGAGCGAAAAAATCGACGTTTTCATACACCGACAAGGTGTGGTAGAGGTTTTTGCCCAGCCCCTGCGGCATCCAGGCGATGCGCGGGCAGACGTCGCGGCGATGCTTCGGGTCGCGCATATCGCCGCCCA > NC_000913/3629055‑3629324
|
aCGCGCAGCACAGCCCAAGTTTTTGCTTCATCCCGCCGGAGAGTTTCCCTGCCGGACGATCGCGAAACGGTGCTAACCCGGTGCTGGTCAGCAGCTCATTGATTCGCACTTCCCGCTCCGCTTTGTCGTGACCGAGCAgg > 2:912659/1‑140 (MQ=255)
aCGCGCAGCACAGCCCAAGTTTTTGCTTCATCCCGCCGGAGAGTTTCCCTGCCGGACGATCGCGAAACGGTGCTAACCCGGTGCTGGTCAGCAGCTCATTGATTCGCACTTCCCGCTCCGCTTTGTCGTGACCGAGCAgg < 2:710099/140‑1 (MQ=255)
agcaCAGCCCAAGTTTTTGCTTCATCCCGCCGGAGAGTTTCCCTGCCGGACGATCGCGAAACGGTGCTAACCCGGTGCTGGTCAGCAGCTCATTGATTCGCACTTCCCGCTCCGCTTTGTCGTGACCGAGCAGgcgagcg > 1:666250/1‑140 (MQ=255)
aaGTTTTTGCTTCATCCCGCCGGAGAGTTTCCCTGCCGGACGATCGCGAAACGGTGCTAACCCGGTGCTGGTCAGCAGCTCATTGATTCGCACTTCCCGCTCCGCTTTGTCGTGACCGAGCAGGCGAGCGAAAAAATCGa < 2:1189994/140‑1 (MQ=255)
gTTTTTGCTTCATCCCGCCGGAGAGTTTCCCTGCCGGACGATCGCGAAACGGTGCTAACCCGGTGCTGGTCAGCAGCTCATTGATTCGCACTTCCCGCTCCGCTTTGTCGTGACCGAGCAGGCGAGCGAAAAAATCGACg < 2:1181065/140‑1 (MQ=255)
gTTTTTGCTTCATCCCGCCGGAGAGTTTCCCTGCCGGACGATCGCGAAACGGTGCTAACCCGGTGCTGGTCAGCAGCTCATTGATTCGCACTTCCCGCTCCGCTTTGTCGTGACCGAGCAGGCGAGCGAAAAAATCGACg < 1:1285714/140‑1 (MQ=255)
gTTTTTGCTTCATCCCGCCGGAGAGTTTCCCTGCCGGACGATCGCGAAACGGTGCTAACCCGGTGCTGGTCAGCAGCTCATTGATTCGCACTTCCCGCTCCGCTTTGTCGTGACCGAGCAGGCGAGCGAAAAAATCGACg < 2:642428/140‑1 (MQ=255)
gTTTTTGCTTCATCCCGCCGGAGAGTTTCCCTGCCGGACGATCGCGAAACGGTGCTAACCCGGTGCTGGTCAGCAGCTCATTGATTCGCACTTCCCGCTCCGCTTTGTCGTGACCGAGCAGGCGAGCGAAAAAATCGACg < 1:727262/140‑1 (MQ=255)
tGCTTCATCCCGCCGGAGAGTTTCCCTGCCGGACGATCGCGAAACGGTGCTAACCCGGTGCTGGTCAGCAGCTCATTGATTCGCACTTCCCGCTCCGCTTTGTCGTGACCGAGCAGGCGAGCGAAAAAATCGACg < 1:225927/135‑1 (MQ=255)
tGCTTCATCCCGCCGGAGAGTTTCCCTGCCGGACGATCGCGAAACGGTGCTAACCCGGTGCTGGTCAGCAGCTCATTGATTCGCACTTCCCGCTCCGCTTTGTCGTGACCGAGCAGGCGAGCGAAAAAATCGACg > 2:225927/1‑135 (MQ=255)
tGCTTCATCCCGCCGGAGAGTTTCCCTGCCGGACGATCGCGAAACGGTGCTAACCCGGTGCTGGTCAGCAGCTCATTGATTCGCACTTCCCGCTCCGCTTTGTCGTGACCGAGCAGGCGAGCGAAAAAATCGACGTTTTc > 1:1130257/1‑140 (MQ=255)
tGCTTCATCCCGCCGGAGAGTTTCCCTGCCGGACGATCGCGAAACGGTGCTAACCCGGTGCTGGTCAGCAGCTCATTGATTCGCACTTCCCGCTCCGCTTTGTCGTGACCGAGCAGGCGAGCGAAAAAATCGACGTTTTc > 1:671872/1‑140 (MQ=255)
ttCATCCCGCCGGAGAGTTTCCCTGCCGGACGATCGCGAAACGGTGCTAACCCGGTGCTGGTCAGCAGCTCATTGATTCGCACTTCCCGCTCCGCTTTGTCGTGACCGAGCAGGCGAGCGAAAAAATCGACGTTTTCATa < 2:1130257/140‑1 (MQ=255)
ttCATCCCGCCGGAGAGTTTCCCTGCCGGACGATCGCGAAACGGTGCTAACCCGGTGCTGGTCAGCAGCTCATTGATTCGCACTTCCCGCTCCGCTTTGTCGTGACCGAACAGGCGAGCGAAAAAATCGACGTTTTCATa < 2:500885/140‑1 (MQ=255)
cATCCCGCCGGAGAGTTTCCCTGCCGGACGATCGCGAAACGGTGCTAACCCGGTGCTGGTCAGCAGCTCATTGATTCGCACTTCCCGCTCCGCTTTGTCGTGACCGAGCAGGCGAGCGAAAAAATCGACGTTTTCATaca < 1:1050766/140‑1 (MQ=255)
cATCCCGCCGGAGAGTTTCCCTGCCGGACGATCGCGAAACGGTGCTAACCCGGTGCTGGTCAGCAGCTCATTGATTCGCACTTCCCGCTCCGCTTTGTCGTGACCGAGCAGGCGAGCGAAAAAATCGACGTTTTCATaca < 1:794756/140‑1 (MQ=255)
aTCCCGCCGGAGAGTTTCCCTGCCGGACGATCGCGAAACGGTGCTAACCCGGTGCTGGTCAGCAGCTCATTGATTCGCACTTCCCGCTCCGCTTTGTCGTGACCGAGCAGGCGAGCGAAAAAATCGACGTTTTCATacac > 2:243190/1‑140 (MQ=255)
aTCCCGCCGGAGAGTTTCCCTGCCGGACGATCGCGAAACGGTGCTAACCCGGTGCTGGTCAGCAGCTCATTGATTCGCACTTCCCGCTCCGCTTTGTCGTGACCGAGCAGGCGAGCGAAAAAATCGACGTTTTCATacac > 2:949913/1‑140 (MQ=255)
tCCCGCCGGAGAGTTTCCCTGCCGGACGATCGCGAAACGGTGCTAACCCGGTGCTGGTCAGCAGCTCATTGATTCGCACTTCCCGCTCCGCTTTGTCGTGACCGAGCAGGCGAGCGAAAAAATCGACGTTTTCATACAcc > 2:516378/1‑140 (MQ=255)
ccgccgGAGAGTTTCCCTGCCGGACGATCGCGAAACGGTGCTAACCCGGTGCTGGTCAGCAGCTCATTGATTCGCACTTCCCGCTCCGCTTTGTCGTGACCGAGCAGGCGAGCGAAAAAATCGACGTTTTCATACACCGa < 2:254793/140‑1 (MQ=255)
ccgccgGAGAGTTTCCCTGCCGGACGATCGCGAAACGGTGCTAACCCGGTGCTGGTCAGCAGCTCATTGATTCGCACTTCCCGCTCCGCTTTGTCGTGACCGAGCAGGCGAGCGAAAAAATCGACGTTTTCATACACCGa < 2:35637/140‑1 (MQ=255)
ccgccgGAGAGTTTCCCTGCCGGACGATCGCGAAACGGTGCTAACCCGGTGCTGGTCAGCAGCTCATTGATTCGCACTTCCCGCTCCGCTTTGTCGTGACCGAGCAGGCGAGCGAAAAAATCGACGTTTTCATACACCGa < 1:382555/140‑1 (MQ=255)
cgccgGAGAGTTTCCCTGCCGGACGATCGCGAAACGGTGCTAACCCGGTGCTGGTCAGCAGCTCATTGATTCGCACTTCCCGCTCCGCTTTGTCGTGACCGAGCAGGCGAGCGAAAAAATCGACGTTTTCATACACCGAc < 2:510372/140‑1 (MQ=255)
gccgGAGAGTTTCCCTGCCGGACGATCGCGAAACGGTGCTAACCCGGTGCTGGTCAGCAGCTCATTGATTCGCACTTCCCGCTCCGCTTTGTCGTGACCGAGCAGGCGAGCGAAAAAATCGACGTTTTCATACACCGACa < 2:810714/140‑1 (MQ=255)
cgGAGAGTTTCCCTGCCGGACGATCGCGAAACGGTGCTAACCCGGTGCTGGTCAGCAGCTCATTGATTCGCACTTCCCGCTCCGCTTTGTCGTGACCGAGCAGGCGAGCGAAAAAATCGACGTTTTCATACACCGACAAg < 1:1248436/140‑1 (MQ=255)
gagTTTCCCTGCCGGACGATCGCGAAACGGTGCTAACCCGGTGCTGGTCAGCAGCTCATTGATTCGCACTTCTCGCTCCGCTTTGTCGTGACCGAGCAGGCGAGCGAAAAAATCGACGTTTTCATACACCGACAAGgtgt < 2:1283726/140‑1 (MQ=255)
gagTTTCCCTGCCGGACGATCGCGAAACGGTGCTAACCCGGTGCTGGTCAGCAGCTCATTGATTCGCACTTCCCGCTCCGCTTTGTCGTGACCGAGCAGGCGAGCGAAAAAATCGACGTTTTCATACACCGACAAGgtgt < 2:611180/140‑1 (MQ=255)
agTTTCCCTGCCGGACGATCGCGAAACGGTGCTAACCCGGTGCTGGTCAGCAGCTCATTGATTCGCACTTCCCGCTCCGCTTTGTCGTGACCGAGCAGGCGAGCGAAAAAATCGACGTTTTCATACACCGACAAGGtgtg < 1:516378/140‑1 (MQ=255)
tCCCTGCCGGACGATCGCGAAACGGTGCTAACCCGGTGCTGGTCAGCAGCTCATTGATTCGCACTTCCCGCTCCGCTTTGTCGTGACCGAGCAGGCGAGCGAAAAAATCGACGTTTTCATACACCGACAAGGTGTGGTag < 2:601514/140‑1 (MQ=255)
gCCGGACGATCGCGAAACGGTGCTAACCCGGTGCTGGTCAGCAGCTCATTGATTCGCACTTCCCGCTCCGCTTTGTCGTGACCGAGCAGGCGAGCGAAAAAATCGACGTTTTCATACACCGACAAGGTGTGGTAGAGGtt < 2:622300/140‑1 (MQ=255)
cGATCGCGAAACGGTGCTAACCCGGTGCTGGTCAGCAGCTCATTGATTCGCACTTCCCGCTCCGCTTTGTCGTGACCGAGCAGGCGAGCGAAAAAATCGACGTTTTCATACACCGACAAGGTGTGGTAGAGGTTTTTGcc < 2:741080/140‑1 (MQ=255)
cGATCGCGAAACGGTGCTAACCCGGTGCTGGTCAGCAGCTCATTGATTCGCACTTCCCGCTCCGCTTTGTCGTGACCGAGCAGGCGAGCGAAAAAATCGACGTTTTCATACACCGACAAGGTGTGGTAGAGGTTTTTGcc > 2:109032/1‑140 (MQ=255)
aaCGGTGCTAACCCGGTGCTGGTCAGCAGCTCATTGATTCGCACTTCCCGCTCCGCTTTGTCGTGACCGAGCAGGCGAGCGAAAAAATCGACGTTTTCATACACCGACAAGGTGTGGTAGAGGTTTTTGCCCAGCCCCTg < 2:562774/140‑1 (MQ=255)
cGGTGCTAACCCGGTGCTGGTCAGCAGCTCATTGATTCGCACTTCCCGCTCCGCTTTGTCGTGACCGAGCAGGCGAGCGAAAAAATCGACGTTTTCATACACCGACAAGGTGTGGTAGAGGTTTTTGCCCAGCCCCTGCg < 1:1383131/140‑1 (MQ=255)
gTGCTAACCCGGTGCTGGTCAGCAGCTCATTGATTCGCACTTCCCGCTCCGCTTTGTCGTGACCGAGCAGGCGAGCGAAAAAATCGACGTTTTCATACACCGACAAGGTGTGGTAGAGGTTTTTGCCCAGCCCCTGCGGc > 2:952946/1‑140 (MQ=255)
tGCTAACCCGGTGCTGGTCAGCAGCTCATTGATTCGCACTTCCCGCTCCGCTTTGTCGTGACCGAGCAGGCGAGCGAAAAAATCGACGTTTTCATACACCGACAAGGTGTGGTAGAGGTTTTTGTCCAGCCCCTGCGGCa < 1:949913/140‑1 (MQ=255)
cTAACCCGGTGCTGGTCAGCAGCTCATTGATTCGCACTTCCCGCTCCGCTTTGTCGTGACCGAGCAGGCGAGCGAAAAAATCGACGTTTTCATACACCGACAAGGTGTGGTAGAGGTTTTTGCCCAGCCCCTGCGGCATc < 2:1167478/140‑1 (MQ=255)
cTAACCCGGTGCTGGTCAGCAGCTCATTGATTCGCACTTCCCGCTCCGCTTTGTCGTGACCGAGCAGGCGAGCGAAAAAATCGACGTTTTCATACACCGACAAGGTGTGGTAGAGGTTTTTGCCCAGCCCCTGCGGCATc < 2:671872/140‑1 (MQ=255)
aCCCGGTGCTGGTCAGCAGCTCATTGATTCGCACTTCCCGCTCCGCTTTGTCGTGACCGAGCAGGCGAGCGAAAAAATCGACGTTTTCATACACCGACAAGGTGTGGTAGAGGTTTTTGCCCAGCCCCTGCGGCATCCAg > 2:1161407/1‑140 (MQ=255)
aCCCGGTGCTGGTCAGCAGCTCATTGATTCGCACTTCCCGCTCCGCTTTGTCGTGACCGAGCAGGCGAGCGAAAAAATCGACGTTTTCATACACCGACAAGGTGTGGTAGAGGTTTTTGCCCAGCCCCTGCGGCATCCAg > 2:806242/1‑140 (MQ=255)
cccGGTGCTGGTCAGCAGCTCATTGATTCGCACTTCCCGCTCCGCTTTGTCGTGACCGAGCAGGCGAGCGAAAAAATCGACGTTTTCATACACCGACAAGGTGTGGTAGAGGTTTTTGCCCAGCCCCTGCGGCATCCAgg < 1:109032/140‑1 (MQ=255)
gTGCTGGTCAGCAGCTCATTGATTCGCACTTCCCGCTCCGCTTTGTCGTGACCGAGCAGGCGAGCGAAAAAATCGACGTTTTCATACACCGACAAGGTGTGGTAGAGGTTTTTGCCCAGCCCCTGCGGCATCCAGGCGAt > 2:1059714/1‑140 (MQ=255)
gTGCTGGTCAGCAGCTCATTGATTCGCACTTCCCGCTCCGCTTTGTCGTGACCGAGCAGGCGAGCGAAAAAATCGACGTTTTCATACACCGACAAGGTGTGGTAGAGGTTTTTGCCCAGCCCCTGCGGCATCCAGGCGAt > 1:1397770/1‑140 (MQ=255)
gTGCTGGTCAGCAGCTCATTGATTCGCACTTCCCGCTCCGCTTTGTCGTGACCGAGCAGGCGAGCGAAAAAATCGACGTTTTCATACACCGACAAGGTGTGGTAGAGGTTTTTGCCCAGCCCCTGCGGCATCCAGGCGAt < 1:1391851/140‑1 (MQ=255)
gTGCTGGTCAGCAGCTCATTGATTCGCACTTCCCGCTCCGCTTTGTCGTGACCGAGCAGGCGAGCGAAAAAATCGACGTTTTCATACACCGACAAGGTGTGGTAGAGGTTTTTGCCCAGCCCCTGCGGCATCCAGGCGAt > 1:1209298/1‑140 (MQ=255)
gTGCTGGTCAGCAGCTCATTGATTCGCACTTCCCGCTCCGCTTTGTCGTGACCGAGCAGGCGAGCGAAAAAATCGACGTTTTCATACACCGACAAGGTGTGGTAGAGGTTTTTGCCCAGCCCCTGCGGCATCCAGGCGAt > 2:185847/1‑140 (MQ=255)
gTGCTGGTCAGCAGCTCATTGATTCGCACTTCCCGCTCCGCTTTGTCGTGACCGAGCAGGCGAGCGAAAAAATCGACGTTTTCATACACCGACAAGGTGTGGTAGAGGTTTTTGCCCAGCCCCTGCGGCATCCAGGCGAt > 2:507753/1‑140 (MQ=255)
gTGCTGGTCAGCAGCTCATTGATTCGCACTTCCCGCTCCGCTTTGTCGTGACCGAGCAGGCGAGCGAAAAAATCGACGTTTTCATACACCGACAAGGTGTGGTAGAGGTTTTTGCCCAGCCCCTGCGGCATCCAGGCGAt > 2:732568/1‑140 (MQ=255)
cTGGTCAGCAGCTCATTGATTCGCACTTCCCGCTCCGCTTTGTCGTGACCGAGCAGGCGAGCGAAAAAATCGACGTTTTCATACACCGACAAGGTGTGGTAGAGGTTTTTGCCCAGCCCCTGCGGCATCCAGGCGATgcg < 2:666250/140‑1 (MQ=255)
ggTCAGCAGCTCATTGATTCGCACTTCCCGCTCCGCTTTGTCGTGACCGAGCAGGCGAGCGAAAAAATCGACGTTTTCATACACCGACAAGGTGTGGTAGAGGTTTTTGCCCAGCCCCTGCGGCATCCAGGCGATGcgcg > 2:933594/1‑140 (MQ=255)
gTCAGCAGCTCATTGATTCGCACTTCCCGCTCCGCTTTGTCGTGACCGAGCAGGCGAGCGAAAAAATCGACGTTTTCATACACCGACAAGGTGTGGTAGAGGTTTTTGCCCAGCCCCTGCGGCATCCAGGCGATGCGCgg > 2:1059428/1‑140 (MQ=255)
agcagcTCATTGATTCGCACTTCCCGCTCCGCTTTGTCGTGACCGAGCAGGCGAGCGAAAAAATCGACGTTTTCATACACCGACAAGGTGTGGTAGAGGTTTTTGCCCAGCCCCTGCGGCATCCAGGCGATGCGCGGGCa < 1:507753/140‑1 (MQ=255)
gcTCATTGATTCGCACTTCCCGCTCCGCTTTGTCGTGACCGAGCAGGCGAGCGAAAAAATCGACGTTTTCATACACCGACAAGGTGTGGTAGAGGTTTTTGCCCAGCCCCTGCGGCATCCAGGCGATGCGCGGGCAGACg < 1:185847/140‑1 (MQ=255)
cTCATTGATTCGCACTTCCCGCTCCGCTTTGTCGTGACCGAGCAGGCGAGCGAAAAAATCGACGTTTTCATACACCGACAAGGTGTGGTAGAGGTTTTTGCCCAGCCCCTGCGGCATCCAGGCGATGCGCGGGCAGACGt > 2:510211/1‑140 (MQ=255)
cTCATTGATTCGCACTTCCCGCTCCGCTTTGTCGTGACCGAGCAGGCGAGCGAAAAAATCGACGTTTTCATACACCGACAAGGTGTGGTAGAGGTTTTTGCCCAGCCCCTGCGGCATCCAGGCGATGCGCGGGCAGACGt > 2:515628/1‑140 (MQ=255)
tCATTGATTCGCACTTCCCGCTCCGCTTTGTCGTGACCGAGCAGGCGAGCGAAAAAATCGACGTTTTCATACACCGACAAGGCGTGGTAGAGGTTTTTGCCCAGCCCCTGCGGCATCCAGGCGATGCGCGGGCAGACGTc > 1:1335117/1‑140 (MQ=255)
cATTGATTCGCACTTCCCGCTCCGCTTTGTCGTGACCGAGCAGGCGAGCGAAAAAATCGACGTTTTCATACACCGACAAGGTGTGGTAGAGGTTTTTGCCCAGCCCCTGCGGCATCCAGGCGATGCGCGGGCAGACGTcg > 1:402152/1‑140 (MQ=255)
cATTGATTCGCACTTCCCGCTCCGCTTTGTCGTGACCGAGCAGGCGAGCGAAAAAATCGACGTTTTCATACACCGACAAGGTGTGGTAGAGGTTTTTGCCCAGCCCCTGCGGCATCCAGGCGATGCGCGGGCAGACGTcg > 2:1263305/1‑140 (MQ=255)
tGATTCGCACTTCCCGCTCCGCTTTGTCGTGACCGAGCAGGCGAGCGAAAAAATCGACGTTTTCATACACCGACAAGGTGTGGTAGAGGTTTTTGCCCAGCCCCTGCGGCATCCAGGCGATGCGCGGGCAGACGTCgcgg > 2:132401/1‑140 (MQ=255)
aTTCGCACTTCCCGCTCCGCTTTGTCGTGACCGAGCAGGCGAGCGAAAAAATCGACGTTTTCATACACCGACAAGGTGTGGTAGAGGTTTTTGCCCAGCCCCTGCGGCATCCAGGCGATGCGCGGGCAGACGTCgcggcg < 1:130585/140‑1 (MQ=255)
aTTCGCACTTCCCGCTCCGCTTTGTCGTGACCGAGCAGGCGAGCGAAAAAATCGACGTTTTCATACACCGACAAGGTGTGGTAGAGGTTTTTGCCCAGCCCCTGCGGCATCCAGGCGATGCGCGGGCAGACGTCgcggcg < 1:105078/140‑1 (MQ=255)
gCACTTCCCGCTCCGCTTTGTCGTGACCGAGCAGGCGAGCGAAAAAATCGACGTTTTCATACACCGACAAGGTGTGGTAGAGGTTTTTGCCCAGCCCCTGCGGCATCCAGGCGATGCGCGGGCAGACGTCGCGGCGATGc < 1:138702/140‑1 (MQ=255)
cACTTCCCGCTCCGCTTTGTCGTGACCGAGCAGGCGAGCGAAAAAATCGACGTTTTCATACACCGACAAGGTGTGGTAGAGGTTTTTGCCCAGCCCCTGCGGCATCCAGGCGATGCGCGGGCAGACGTCGCGGCGATGCt > 1:891533/1‑140 (MQ=255)
aCTTCCCGCTCCGCTTTGTCGTGACCGAGCAGGCGAGCGAAAAAATCGACGTTTTCATACACCGACAAGGTGTGGTAGAGGTTTTTGCCCAGCCCCTGCGGCATCCAGGCGATGCGCGGGCAGACGTCGCGGCGATGCtt > 1:303782/1‑140 (MQ=255)
aCTTCCCGCTCCGCTTTGTCGTGACCGAGCAGGCGAGCGAAAAAATCGACGTTTTCATACACCGACAAGGTGTGGTAGAGGTTTTTGCCCAGCCCCTGCGGCATCCAGGCGATGCGCGGGCAGACGTCGCGGCGATGCtt > 2:659331/1‑140 (MQ=255)
cTTCCCGCTCCGCTTTGTCGTGACCGAGCAGGCGAGCGAAAAAATCGACGTTTTCATACACCGACAAGGTGTGGTAGAGGTTTTTGCCCAGCCCCTGCGGCATCCAGGCGATGCGCGGGCAGACGTCGCGGCGATGCTTc < 1:674646/140‑1 (MQ=255)
ctccgctTTGTCGTGACCGAGCAGGCGAGCGAAAAAATCGACGTTTTCATACACCGACAAGGTGTGGTAGAGGTTTTTGCCCAGCCCCTGCGGCATCCAGGCGATGCGCGGGCAGACGTCGCGGCGATGCTTCGGGTcgc > 1:14113/1‑140 (MQ=255)
cgctTTGTCGTGACCGAGCAGGCGAGCGAAAAAATCGACGTTTTCATACACCGACAAGGTGTGGTAGAGGTTTTTGCCCAGCCCCTGCGGCATCCAGGCGATGCGCGGGCAGACGTCGCGGCGATGCTTCGGGTc < 2:190154/135‑1 (MQ=255)
cgctTTGTCGTGACCGAGCAGGCGAGCGAAAAAATCGACGTTTTCATACACCGACAAGGTGTGGTAGAGGTTTTTGCCCAGCCCCTGCGGCATCCAGGCGATGCGCGGGCAGACGTCGCGGCGATGCTTCGGGTc > 1:190154/1‑135 (MQ=255)
gctTTGTCGTGACCGAGCAGGCGAGCGAAAAAATCGACGTTTTCATACACCGACAAGGTGTGGTAGAGGTTTTTGCCCAGCCCCTGCGGCATCCAGGCGATGCGCGGGCAGACGTCGCGGCGATGCTTCGGGTCGCGCat > 2:723819/1‑140 (MQ=255)
tGTCGTGACCGAGCAGGCGAGCGAAAAAATCGACGTTTTCATACACCGACAAGGTGTGGTAGAGGTTTTTGCCCAGCCCCTGCGGCATCCAGGCGATGCGCGGGCAGACGTCGCGGCGATGCTTCGGGTCGCGCATATcg < 1:806242/140‑1 (MQ=255)
tGTCGTGACCGAGCAGGCGAGCGAAAAAATCGACGTTTTCATACACCGACAAGGTGTGGTAGAGGTTTTTGCCCAGCCCCTGCGGCATCCAGGCGATGCGCGGGCAGACGTCGCGGCGATGCTTCGGGTCGCGCATATcg < 2:14113/140‑1 (MQ=255)
tGTCGTGACCGAGCAGGCGAGCGAAAAAATCGACGTTTTCATACACCGACAAGGTGTGGTAGAGGTTTTTGCCCAGCCCCTGCGGCATCCAGGCGATGCGCGGGCAGACGTCGCGGCGATGCTTCGGGTCGCGCATATcg < 1:1161407/140‑1 (MQ=255)
tGTCGTGACCGAGCAGGCGAGCGAAAAAATCGACGTTTTCATACACCGACAAGGTGTGGTAGAGGTTTTTGCCCAGCCCCTGCGGCATCCAGGCGATGCGCGGGCAGACGTCGCGGCGATGCTTCGGGTCGCGCATATcg < 2:1397770/140‑1 (MQ=255)
tGTCGTGACCGAGCAGGCGAGCGAAAAAATCGACGTTTTCATACACCGACAAGGTGTGGTAGAGGTTTTTGCCCAGCCCCTGCGGCATCCAGGCGATGCGCGGGCAGACGTCGCGGCGATGCTTCGGGTCGCGCATATcg < 1:912659/140‑1 (MQ=255)
tGACCGAGCAGGCGAGCGAAAAAATCGACGTTTTCATACACCGACAAGGTGTGGTAGAGGTTTTTGCCCAGCCCCTGCGGCATCCAGGCGATGCGCGGGCAGACGTCGCGGCGATGCTTCGGGTCGCGCATATCgccgcc > 2:667281/1‑140 (MQ=255)
tGACCGAGCAGGCGAGCGAAAAAATCGACGTTTTCATACACCGACAAGGTGTGGTAGAGGTTTTTGCCCAGCCCCTGCGGCATCCAGGCGATGCGCGGGCAGACGTCGCGGCGATGCTTCGGGTCGCGCATATCgccgcc < 1:243190/140‑1 (MQ=255)
gACCGAGCAGGCGAGCGAAAAAATCGACGTTTTCATACACCGACAAGGTGTGGTAGAGGTTTTTGCCCAGCCCCTGCGGCATCCAGGCGATGCGCGGGCAGACGTCGCGGCGATGCTTCGGGTCGCGCATATCGCCGccc < 1:933594/140‑1 (MQ=255)
aCCGAGCAGGCGAGCGAAAAAATCGACGTTTTCATACACCGACAAGGTGTGGTAGAGGTTTTTGCCCAGCCCCTGCGGCATCCAGGCGATGCGCGGGCAGACGTCGCGGCGATGCTTCGGGTCGCGCATATCGCCGCCCa > 1:1358230/1‑140 (MQ=255)
|
ACGCGCAGCACAGCCCAAGTTTTTGCTTCATCCCGCCGGAGAGTTTCCCTGCCGGACGATCGCGAAACGGTGCTAACCCGGTGCTGGTCAGCAGCTCATTGATTCGCACTTCCCGCTCCGCTTTGTCGTGACCGAACAGGCGAGCGAAAAAATCGACGTTTTCATACACCGACAAGGTGTGGTAGAGGTTTTTGCCCAGCCCCTGCGGCATCCAGGCGATGCGCGGGCAGACGTCGCGGCGATGCTTCGGGTCGCGCATATCGCCGCCCA > NC_000913/3629055‑3629324
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
