Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A6 F28 I1 R1
|
191 |
83.5 |
2830284 |
99.3% |
2810472 |
139.1 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,900,244 |
T→C |
T112A (ACC→GCC) |
yieL ← |
putative hydrolase YieL |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,900,244 | 0 | T | C | 100.0%
| 401.7
/ NA
| 109 | T112A (ACC→GCC) | yieL | putative hydrolase YieL |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (54/55); total (54/55) |
Only 100 of 109 total aligned reads displayed.
CGTTCAGATTGCAATGCGTTGGAGTGGTAAGTTATGGCGATCAAATCACCATGCGCAACAGAACGCGTATCCAGATAACTGCCTGGCACCAGAATCATACTGGAGTTAACCTGGCGCTGAGGATTAGTCATTGCGGTGCCTGTATCAATGCTGCGTACACCATCAACATTGAAAAAATACTCGTACAGGTTGCCTTTCAGGATAGGTGTGCGCCACGACCAGACTCCTGCTTCGTCTTTGGTCATCGGGTGAATATTGTCCGGAACCGGAACA > NC_000913/3900108‑3900380
|
cGTTCAGATTGCAATGCGTTGGAGTGGTAAGTTATGGCGATCAAATCACCATGCGCAACAGAACGCGTATCCAGATAACTGCCTGGCACCAGAATCATACTGGAGTTAACCTGGCGCTGAGGATTAGTCATTGCGGCGcc < 1:272386/140‑1 (MQ=255)
cGTTCAGATTGCAATGCGTTGGAGTGGTAAGTTATGGCGATCAAATCACCATGCGCAACAGAACGCGTATCCAGATAACTGCCTGGCACCAGAATCATACTGGAGTTAACCTGGCGCTGAGGATTAGTCATTGCGGCGcc < 1:1229144/140‑1 (MQ=255)
gTTCAGATTGCAATGCGTTGGAGTGGTAAGTTATGGCGATCAAATCACCATGCGCAACAGAACGCGTATCCAGATAACTGCCTGGCACCAGAATCATACTGGAGTTAACCTGGCGCTGAGGATTAGTCATTGCGGCGCCt > 2:367268/1‑140 (MQ=255)
ttCAGATTGCAATGCGTTGGAGTGGTAAGTTATGGCGATCAAATCACCATGCGCAACAGAACGCGTATCCAGATAACTGCCTGGCACCAGAATCATACTGGAGTTAACCTGGCGCTGAGGATTAGTCATTGCGGCGCCTg < 2:366704/140‑1 (MQ=255)
cAGATTGCAATGCGTTGGAGTGGTAAGTTATGGCGATCAAATCACCATGCGCAACAGAACGCGTATCCAGATAACTGCCTGGCACCAGAATCATACTGGAGTTAACCTGGCGCTGAGGATTAGTCATTGCGGCGcc > 1:168979/1‑136 (MQ=255)
cAGATTGCAATGCGTTGGAGTGGTAAGTTATGGCGATCAAATCACCATGCGCAACAGAACGCGTATCCAGATAACTGCCTGGCACCAGAATCATACTGGAGTTAACCTGGCGCTGAGGATTAGTCATTGCGGCGcc < 2:168979/136‑1 (MQ=255)
aGATTGCAATGCGTTGGAGTGGTAAGTTATGGCGATCAAATCACCATGCGCAACAGAACGCGTATCCAGATAACTGCCTGGCACCAGAATCATACTGGAGTTAACCTGGCGCTGAGGATTAGTCATTGCGGCGCCTGTAt < 2:537070/140‑1 (MQ=255)
aGATTGCAATGCGTTGGAGTGGTAAGTTATGGCGATCAAATCACCATGCGCAACAGAACGCGTATCCAGATAACTGCCTGGCACCAGAATCATACTGGAGTTAACCTGGCGCTGAGGATTAGTCATTGCGGCGCCTGTAt < 1:762191/140‑1 (MQ=255)
tGCAATGCGTTGGAGTGGTAAGTTATGGCGATCAAATCACCATGCGCAACAGAACGCGTATCCAGATAACTGCCTGGCACCAGAATCATACTGGAGTTAACCTGGCGCTGAGGATTAGTCATTGCGGCGCCTGTATCAAt < 2:215412/140‑1 (MQ=255)
gCAATGCGTTGGAGTGGTAAGTTATGGCGATCAAATCACCATGCGCAACAGAACGCGTATCCAGATAACTGCCTGGCACCAGAATCATACTGGAGTTAACCTGGCGCTGAGGATTAGTCATTGCGGCGCCTGTATCAAtg < 1:1355050/140‑1 (MQ=255)
gCAATGCGTTGGAGTGGTAAGTTATGGCGATCAAATCACCATGCGCAACAGAACGCGTATCCAGATAACTGCCTGGCACCAGAATCATACTGGAGTTAACCTGGCGCTGAGGATTAGTCATTGCGGCGCCTGTATCAAtg < 2:1059903/140‑1 (MQ=255)
gCAATGCGTTGGAGTGGTAAGTTATGGCGATCAAATCACCATGCGCAACAGAACGCGTATCCAGATAACTGCCTGGCACCAGAATCATACTGGAGTTAACCTGGCGCTGAGGATTAGTCATTGCGGCGCCTGTATCAAtg < 2:21088/140‑1 (MQ=255)
cGTTGGAGTGGTAAGTTATGGCGATCAAATCACCATGCGCAACAGAACGCGTATCCAGATAACTGCCTGGCACCAGAATCATACTGGAGTTAACCTGGCGCTGAGGATTAGTCATTGCGGCGCCTGTATCAATGCTGCGt < 2:517943/140‑1 (MQ=255)
ttGGAGTGGTAAGTTATGGCGATCAAATCACCATGCGCAACAGAACGCGTATCCAGATAACTGCCTGGCACCAGAATCATACTGGAGTTAACCTGGCGCTGAGGATTAGTCATTGCGGCGCCTGTATCAAtg > 2:1166075/1‑132 (MQ=255)
ttGGAGTGGTAAGTTATGGCGATCAAATCACCATGCGCAACAGAACGCGTATCCAGATAACTGCCTGGCACCAGAATCATACTGGAGTTAACCTGGCGCTGAGGATTAGTCATTGCGGCGCCTGTATCAAtg < 1:1166075/132‑1 (MQ=255)
tGGTAAGTTATGGCGATCAAATCACCATGCGCAACAGAACGCGTATCCAGATAACTGCCTGGCACCAGAATCATACTGGAGTTAACCTGGCGCTGAGGATTAGTCATTGCGGCGCCTGTATCAATGCTGCGTACACCATc > 2:1101228/1‑140 (MQ=255)
ggTAAGTTATGGCGATCAAATCACCATGCGCAACAGAACGCGTATCCAGATAACTGCCTGGCACCAGAATCATACTGGAGTTAACCTGGCGCTGAGGATTAGTCATTGCGGCGCCTGTATCAATGCTGCGTACACCATCa < 1:1328569/140‑1 (MQ=255)
gTAAGTTATGGCGATCAAATCACCATGCGCAACAGAACGCGTATCCAGATAACTGCCTGGCACCAGAATCATACTGGAGTTAACCTGGCGCTGAGGATTAGTCATTGCGGCGCCTGTATCAATGCTGCGTACACCATCaa > 1:930314/1‑140 (MQ=255)
gTAAGTTATGGCGATCAAATCACCATGCGCAACAGAACGCGTATCCAGATAACTGCCTGGCACCAGAATCATACTGGAGTTAACCTGGCGCTGAGGATTAGTCATTGCGGCGCCTGTATCAATGCTGCGTACACCATCaa > 2:492359/1‑140 (MQ=255)
tAAGTTATGGCGATCAAATCACCATGCGCAACAGAACGCGTATCCAGATAACTGCCTGGCACCAGAATCATACTGGAGTTAACCTGGCGCTGAGGATTAGTCATTGCGGCGCCTGTATCAATGCTGCGTACACCATCAAc > 2:374048/1‑140 (MQ=255)
aGTTATGGCGATCAAATCACCATGCGCAACAGAACGCGTATCCAGATAACTGCCTGGCACCAGAATCATACTGGAGTTAACCTGGCGCTGAGGATTAGTCATTGCGGCGCCTGTATCAATGCTGCGTACACCATCAACAt > 1:1075701/1‑140 (MQ=255)
ttATGGCGATCAAATCACCATGCGCAACAGAACGCGTATCCAGATAACTGCCTGGCACCAGAATCATACTGGAGTTAACCTGGCGCTGAGGATTAGTCATTGCGGCGCCTGTATCAATGCTGCGTACACCATCAACATTg > 2:441245/1‑140 (MQ=255)
ttATGGCGATCAAATCACCATGCGCAACAGAACGCGTATCCAGATAACTGCCTGGCACCAGAATCATACTGGAGTTAACCTGGCGCTGAGGATTAGTCATTGCGGCGCCTGTATCAATGCTGCGTACACCATCAACATTg > 1:904647/1‑140 (MQ=255)
aTGGCGATCAAATCACCATGCGCAACAGAACGCGTATCCAGATAACTGCCTGGCACCAGAATCATACTGGAGTTAACCTGGCGCTGAGGATTAGTCATTGCGGCGCCTGTATCAATGCTGCGTACACCATCAACATTGaa > 1:1327489/1‑140 (MQ=255)
tGGCGATCAAATCACCATGCGCAACAGAACGCGTATCCAGATAACTGCCTGGCACCAGAATCATACTGGAGTTAACCTGGCGCTGAGGATTAGTCATTGCGGCGCCTGTATCAATGCTGCGTACACCATCAACATTGaaa > 1:1204294/1‑140 (MQ=255)
tGGCGATCAAATCACCATGCGCAACAGAACGCGTATCCAGATAACTGCCTGGCACCAGAATCATACTGGAGTTAACCTGGCGCTGAGGATTAGTCATTGCGGCGCCTGTATCAATGCTGCGTACACCATCAACATTGaaa > 1:515794/1‑140 (MQ=255)
ggCGATCAAATCACCATGCGCAACAGAACGCGTATCCAGATAACTGCCTGGCACCAGAATCATACTGGAGTTAACCTGGCGCTGAGGATTAGTCATTGCGGCGCCTGTATCAATGCTGCGTACACCATCAACATTGaaaa > 2:272139/1‑140 (MQ=255)
ggCGATCAAATCACCATGCGCAACAGAACGCGTATCCAGATAACTGCCTGGCACCAGAATCATACTGGAGTTAACCTGGCGCTGAGGATTAGTCATTGCGGCGCCTGTATCAATGCTGCGTACACCATCAACATTGaaaa < 2:515794/140‑1 (MQ=255)
gCGATCAAATCACCATGCGCAACAGAACGCGTATCCAGATAACTGCCTGGCACCAGAATCATACTGGAGTTAACCTGGCGCTGAGGATTAGTCATTGCGGCGCCTGTATCAATGCTGCGTACACCATCAACATTGaaaaa > 1:872256/1‑140 (MQ=255)
cGATCAAATCACCATGCGCAACAGAACGCGTATCCAGATAACTGCCTGGCACCAGAATCATACTGGAGTTAACCTGGCGCTGAGGATTAGTCATTGCGGCGCCTGTATCAATGCTGCGTACACCATCAACATTGaaaaaa < 2:732681/140‑1 (MQ=255)
aTCAAATCACCATGCGCAACAGAACGCGTATCCAGATAACTGCCTGGCACCAGAATCATACTGGAGTTAACCTGGCGCTGAGGATTAGTCATTGCGGCGCCTGTATCAATGCTGCGTACACCATCAACATTGAAAAAATa > 1:546222/1‑140 (MQ=255)
aTCAAATCACCATGCGCAACAGAACGCGTATCCAGATAACTGCCTGGCACCAGAATCATACTGGAGTTAACCTGGCGCTGAGGATTAGTCATTGCGGCGCCTGTATCAATGCTGCGTACACCATCAACATTGAAAAAATa < 2:872256/140‑1 (MQ=255)
aTCAAATCACCATGCGCAACAGAACGCGTATCCAGATAACTGCCTGGCACCAGAATCATACTGGAGTTAACCTGGCGCTGAGGATTAGTCATTGCGGCGCCTGTATCAATGCTGCGTACACCATCAACATTGAAAAAATa > 1:193659/1‑140 (MQ=255)
tCAAATCACCATGCGCAACAGAACGCGTATCCAGATAACTGCCTGGCACCAGAATCATACTGGAGTTAACCTGGCGCTGAGGATTAGTCATTGCGGCGCCTGTATCAATGCTGCGTACACCATCAACATTGAAAAAATAc > 1:320230/1‑140 (MQ=255)
cAAATCACCATGCGCAACAGAACGCGTATCCAGATAACTGCCTGGCACCAGAATCATACTGGAGTTAACCTGGCGCTGAGGATTAGTCATTGCGGCGCCTGTATCAATGCTGCGTACACCATCAACATTGAAAAAATACt > 2:1243967/1‑140 (MQ=255)
cAAATCACCATGCGCAACAGAACGCGAATCCAGATAACTGCCTGGCACCAGAATCATACTGGAGTTAACCTGGCGCTGAGGATTAGTCATTGCGGCGCCTGTATCAATGCTGCGTACACCATCAACATTGAAAAAATACt > 2:258811/1‑140 (MQ=255)
aaTCACCATGCGCAACAGAACGCGTATCCAGATAACTGCCTGGCACCAGAATCATACTGGAGTTAACCTGGCGCTGAGGATTAGTCATTGCGGCGCCTGTATCAATGCTGCGTACACCATCAACATTGAAAAAATACTCg < 2:508317/140‑1 (MQ=255)
aTGCGCAACAGAACGCGTATCCAGATAACTGCCTGGCACCAGAATCATACTGGAGTTAACCTGGCGCTGAGGATTAGTCATTGCGGCGCCTGTATCAATGCTGCGTACACCATCAACATTGAAAAAATACTCGTACAGGt > 1:624880/1‑140 (MQ=255)
tGCGCAACAGAACGCGTATCCAGATAACTGCCTGGCACCAGAATCATACTGGAGTTAACCTGGCGCTGAGGATTAGTCATTGCGGCGCCTGTATCAATGCTGCGTACACCATCAACATTGAAAAAATACTCGTACAGGtt > 1:549868/1‑140 (MQ=255)
tGCGCAACAGAACGCGTATCCAGATAACTGCCTGGCACCAGAATCATACTGGAGTTAACCTGGCGCTGAGGATTAGTCATTGCGGCGCCTGTATCAATGCTGCGTACACCATCAACATTGAAAAAATACTCGTACAGGtt > 1:404592/1‑140 (MQ=255)
gcgcAACAGAACGCGTATCCAGATAACTGCCTGGCACCAGAATCATACTGGAGTTAACCTGGCGCTGAGGATTAGTCATTGCGGCGCCTGTATCAATGCTGCGTACACCATCAACATTGAAAAAATACTCGTACAGGTTg < 1:356247/140‑1 (MQ=255)
gcgcAACAGAACGCGTATCCAGATAACTGCCTGGCACCAGAATCATACTGGAGTTAACCTGGCGCTGAGGATTAGTCATTGCGGCGCCTGTATCAATGCTGCGTACACCATCAACATTGAAAAAATACTCGTACAGGTTg < 2:320230/140‑1 (MQ=255)
gcgcAACAGAACGCGTATCCAGATAACTGCCTGGCACCAGAATCATACTGGAGTTAACCTGGCGCTGAGGATTAGTCATTGCGGCGCCTGTATCAATGCTGCGTACACCATCAACATTGAAAAAATACTCGTACAGGTTg > 1:191602/1‑140 (MQ=255)
gcgcAACAGAACGCGTATCCAGATAACTGCCTGGCACCAGAATCATACTGGAGTTAACCTGGCGCTGAGGATTAGTCATTGCGGCGCCTGTATCAATGCTGCGTACACCATCAACATTGAAAAAATACTCGTACAGGTTg < 2:1189649/140‑1 (MQ=255)
gcgcAACAGAACGCGTATCCAGATAACTGCCTGGCACCAGAATCATACTGGAGTTAACCTGGCGCTGAGGATTAGTCATTGCGGCGCCTGTATCAATGCTGCGTACACCATCAACATTGAAAAAATACTCGTACAGGTTg < 2:549868/140‑1 (MQ=255)
cgcAACAGAACGCGTATCCAGATAACTGCCTGGCACCAGAATCATACTGGAGTTAACCTGGCGCTGAGGATTAGTCATTGCGGCGCCTGTATCAATGCTGCGTACACCATCAACATTGAAAAAATACTCGTACAGGTTGc < 1:367268/140‑1 (MQ=255)
cAACAGAACGCGTATCCAGATAACTGCCTGGCACCAGAATCATACTGGAGTTAACCTGGCGCTGAGGATTAGTCATTGCGGCGCCTGTATCAATGCTGCGTACACCATCAACATTGAAAAAATACTCGTACAGGTTGCCt > 2:173818/1‑140 (MQ=255)
cAACAGAACGCGTATCCAGATAACTGCCTGGCACCAGAATCATACTGGAGTTAACCTGGCGCTGAGGATTAGTCATTGCGGCGCCTGTATCAATGCTGCGTACACCATCAACATTGAAAAAATACTCGTACAGGTTGCCt < 2:193659/140‑1 (MQ=255)
aaCAGAACGCGTATCCAGATAACTGCCTGGCACCAGAATCATACTGGAGTTAACCTGGCGCTGAGGATTAGTCATTGCGGCGCCTGTATCAATGCTGCGTACACCATCAACATTGAAAAAATACTCGTACAGGTTGCCtt > 2:300045/1‑140 (MQ=255)
aCAGAACGCGTATCCAGATAACTGCCTGGCACCAGAATCATACTGGAGTTAACCTGGCGCTGAGGATTAGTCATTGCGGCGCCTGTATCAATGCTGCGTACACCATCAACATTGAAAAAATACTCGTACAGGTTGCCttt < 1:709676/140‑1 (MQ=255)
aCAGAACGCGTATCCAGATAACTGCCTGGCACCAGAATCATACTGGAGTTAACCTGGCGCTGAGGATTAGTCATTGCGGCGCCTGTATCAATGCTGCGTACACCATCAACATTGAAAAAATACTCGTACAGGTTGCCttt < 1:492359/140‑1 (MQ=255)
cAGAACGCGTATCCAGATAACTGCCTGGCACCAGAATCATACTGGAGTTAACCTGGCGCTGAGGATTAGTCATTGCGGCGCCTGTATCAATGCTGCGTACACCATCAACATTGAAAAAATACTCGTACAGGTTGCCTTTc > 2:1354806/1‑140 (MQ=255)
cgcgTATCCAGATAACTGCCTGGCACCAGAATCATACTGGAGTTAACCTGGCGCTGAGGATTAGTCATTGCGGCGCCTGTATCAATGCTGCGTACACCATCAACATTGAAAAAATACTCGTACAGGTTGCCTTTCAGGAt > 2:143389/1‑140 (MQ=255)
cgcgTATCCAGATAACTGCCTGGCACCAGAATCATACTGGAGTTAACCTGGCGCTGAGGATTAGTCATTGCGGCGCCTGTATCAATGCTGCGTACACCATCAACATTGAAAAAATACTCGTACAGGTTGCCTTTCAGGAt < 1:173818/140‑1 (MQ=255)
aTCCAGATAACTGCCTGGCACCAGAATCATACTGGAGTTAACCTGGCGCTGAGGATTAGTCATTGCGGCGCCTGTATCAATGCTGCGTACACCATCAACATTGAAAAAATACTCGTACAGGTTGCCTTTCAGGATAGgtg < 1:461154/140‑1 (MQ=255)
aTAACTGCCTGGCACCAGAATCATACTGGAGTTAACCTGGCGCTGAGGATTAGTCATTGCGGCGCCTGTATCAATGCTGCGTACACCATCAACATTGAAAAAATACTCGTACAGGTTGCCTTTCAGGATAGGTGTGCGcc < 1:143389/140‑1 (MQ=255)
cTGCCTGGCACCAGAATCATACTGGAGTTAACCTGGCGCTGAGGATTAGTCATTGCGGCGCCTGTATCAATGCTGCGTACACCATCAACATTGAAAAAATACTCGTACAGGTTGCCTTTCAGGATAGGTGTGCGCCACGa > 1:659164/1‑140 (MQ=255)
cTGCCTGGCACCAGAATCATACTGGAGTTAACCTGGCGCTGAGGATTAGTCATTGCGGCGCCTGTATCAATGCTGCGTACACCATCAACATTGAAAAAATACTCGTACAGGTTGCCTTTCAGGATAGGTGTGCGCCACGa > 2:1347763/1‑140 (MQ=255)
cTGCCTGGCACCAGAATCATACTGGAGTTAACCTGGCGCTGAGGATTAGTCATTGCGGCGCCTGTATCAATGCTGCGTACACCATCAACATTGAAAAAATACTCGTACAGGTTGCCTTTCAGGATAGGTGTGCGCCACGa > 1:727271/1‑140 (MQ=255)
tGCCTGGCACCAGAATCATACTGGAGTTAACCTGGCGCTGAGGATTAGTCATTGCGGCGCCTGTATCAATGCTGCGTACACCATCAACATTGAAAAAATACTCGTACAGGTTGCCTTTCAGGATAGGTGTGCGCCACGAc > 2:773209/1‑140 (MQ=255)
ccTGGCACCAGAATCATACTGGAGTTAACCTGGCGCTGAGGATTAGTCATTGCGGCGCCTGTATCAATGCTGCGTACACCATCAACATTGAAAAAATACTCGTACAGGTTGCCTTTCAGGATAGGTGTGCGCCACGACCa < 2:904647/140‑1 (MQ=255)
ccTGGCACCAGAATCATACTGGAGTTAACCTGGCGCTGAGGATTAGTCATTGCGGCGCCTGTATCAATGCTGCGTACACCATCAACATTGAAAAAATACTAGTACAGGTTGCCTTTCAGGATAGGTGTGCGCCACGACCa > 1:851872/1‑140 (MQ=255)
cTGGCACCAGAATCATACTGGAGTTAACCTGGCGCTGAGGATTAGTCATTGCGGCGCCTGTATCAATGCTGCGTACACCATCAACATTGAAAAAATACTCGTACAGGTTGCCTTTCAGGATAGGTGTGCGCCACGACCAg > 2:1049600/1‑140 (MQ=255)
tGGCACCAGAATCATACTGGAGTTAACCTGGCGCTGAGGATTAGTCATTGCGGCGCCTGTATCAATGCTGCGTACACCATCAACATTGAAAAAATACTCGTACAGGTTGCCTTTCAGGATAGGTGTGCGCCACGACCAGa > 2:704014/1‑140 (MQ=255)
gAATCATACTGGAGTTAACCTGGCGCTGAGGATTAGTCATTGCGGCGCCTGTATCAATGCTGCGTACACCATCAACATTGAAAAAATACTCGTACAGGTTGCCTTTCAGGATAGGTGTGCGCCACGACCAGACTCCTGCt < 1:955338/140‑1 (MQ=255)
gAATCATACTGGAGTTAACCTGGCGCTGAGGATTAGTCATTGCGGCGCCTGTATCAATGCTGCGTACACCATCAACATTGAAAAAATACTCGTACAGGTTGCCTTTCAGGATAGGTGTGCGCCACGACCAGACTCCTGCt < 1:1049600/140‑1 (MQ=255)
aaTCATACTGGAGTTAACCTGGCGCTGAGGATTAGTCATTGCGGCGCCTGTATCAATGCTGCGTACACCATCAACATTGAAAAAATACTAGTACAGGTTGCCTTTCAGGATAGGTGTGCGCCACGACCAGACTCCTGCtt < 2:851872/140‑1 (MQ=255)
aTCATACTGGAGTTAACCTGGCGCTGAGGATTAGTCATTGCGGCGCCTGTATCAATGCTGCGTACACCATCAACATTGAAAAAATACTCGTACAGGTTGCCTTTCAGGATAGGTGTGCGCCACGACCAGACTCCTGCTTc < 1:92885/140‑1 (MQ=255)
ggAGTTAACCTGGCGCTGAGGATTAGTCATTGCGGCGCCTGTATCAATGCTGCGTACACCATCAACATTGAAAAAATACTCGTACAGGTTGCCTTTCAGGATAGGTGTGCGCCACGACCAGACTCCTGCTTCGTCTTTgg < 2:1121496/140‑1 (MQ=255)
gAGTTAACCTGGCGCTGAGGATTAGTCATTGCGGCGCCTGTATCAATGCTGCGTACACCATCAACATTGAAAAAATACTCGTACAGGTTGCCTTTCAGGATAGGTGTGCGCCACGACCAGACTCCTGCTTCGTCTTTg > 2:937985/1‑138 (MQ=255)
gAGTTAACCTGGCGCTGAGGATTAGTCATTGCGGCGCCTGTATCAATGCTGCGTACACCATCAACATTGAAAAAATACTCGTACAGGTTGCCTTTCAGGATAGGTGTGCGCCACGACCAGACTCCTGCTTCGTCTTTGGt > 2:639091/1‑140 (MQ=255)
gAGTTAACCTGGCGCTGAGGATTAGTCATTGCGGCGCCTGTATCAATGCTGCGTACACCATCAACATTGAAAAAATACTCGTACAGGTTGCCTTTCAGGATAGGTGTGCGCCACGACCAGACTCCTGCTTCGTCTTTGGt > 2:600441/1‑140 (MQ=255)
gAGTTAACCTGGCGCTGAGGATTAGTCATTGCGGCGCCTGTATCAATGCTGCGTACACCATCAACATTGAAAAAATACTCGTACAGGTTGCCTTTCAGGATAGGTGTGCGCCACGACCAGACTCCTGCTTCGTCTTTGGt > 1:43941/1‑140 (MQ=255)
ttAACCTGGCGCTGAGGATTAGTCATTGCGGCGCCTGTATCAATGCTGCGTACACCATCAACATTGAAAAAATACTCGTACAGGTTGCCTTTCAGGATAGGTGTGCGCCACGACCAGACTCCTGCTTCGTCTTTGGTCAt < 1:441245/140‑1 (MQ=255)
ttAACCTGGCGCTGAGGATTAGTCATTGCGGCGCCTGTATCAATGCTGCGTACACCATCAACATTGAAAAAATACTCGTACAGGTTGCCTTTCAGGATAGGTGTGCGCCACGACCAGACTCCTGCTTCGTCTTTGGTCAt < 1:300045/140‑1 (MQ=255)
ttAACCTGGCGCTGAGGATTAGTCATTGCGGCGCCTGTATCAATGCTGCGTACACCATCAACATTGAAAAAATACTCGTACAGGTTGCCTTTCAGGATAGGTGTGCGCCACGACCAGACTCCTGCTTCGTCTTTGGTCAt < 1:661521/140‑1 (MQ=255)
ttAACCTGGCGCTGAGGATTAGTCATTGCGGCGCCTGTATCAATGCTGCGTACACCATCAACATTGAAAAAATACTCGTACAGGTTGCCTTTCAGGATAGGTGTGCGCCACGACCAGACTCCTGCTTCGTCTTTGGTCAt < 2:43941/140‑1 (MQ=255)
aaCCTGGCGCTGAGGATTAGTCATTGCGGCGCCTGTATCAATGCTGCGTACACCATCAACATTGAAAAAATACTCGTACAGGTTGCCTTTCAGGATAGGTGTGCGCCACGACCAGACTCCTGCTTCGTCTTTGGTCATCg > 2:387398/1‑140 (MQ=255)
aaCCTGGCGCTGAGGATTAGTCATTGCGGCGCCTGTATCAATGCTGCGTACACCATCAACATTGAAAAAATACTCGTACAGGTTGCCTTTCAGGATAGGTGTGCGCCACGACCAGACTCCTGCTTCGTCTTTGGTCATCg > 1:1008582/1‑140 (MQ=255)
gcTGAGGATTAGTCATTGCGGCGCCTGTATCAATGCTGCGTACACCATCAACATTGAAAAAATACTCGTACAGGTTGCCTTTCAGGATAGGTGTGCGCCACGACCAGACTCCTGCTTCGTCTTTGGTCATCGGGTGAata < 2:191602/140‑1 (MQ=255)
gcTGAGGATTAGTCATTGCGGCGCCTGTATCAATGCTGCGTACACCATCAACATTGAAAAAATACTCGTACAGGTTGCCTTTCAGGATAGGTGTGCGCCACGACCAGACTCCTGCTTCGTCTTTGGTCATCGGGTGAata > 2:363076/1‑140 (MQ=255)
aGGATTAGTCATTGCGGCGCCTGTATCAATGCTGCGTACACCATCAACATTGAAAAAATACTCGTACAGGTTGCCTTTCAGGATAGGTGTGCGCCACGACCAGACTCCTGCTTCGTCTTTGGTc < 2:1095724/124‑1 (MQ=255)
aGGATTAGTCATTGCGGCGCCTGTATCAATGCTGCGTACACCATCAACATTGAAAAAATACTCGTACAGGTTGCCTTTCAGGATAGGTGTGCGCCACGACCAGACTCCTGCTTCGTCTTTGGTc > 1:1095724/1‑124 (MQ=255)
aGGATTAGTCATTGCGGCGCCTGTATCAATGCTGCGTACACCATCAACATTGAAAAAATACTCGTACAGGTTGCCTTTCAGGATAGGTGTGCGCCACGACCAGACTCCTGCTTCGTCTTTGGTCATCGGGTGAATATTGt > 2:146588/1‑140 (MQ=255)
ttAGTCATTGCGGCGCCTGTATCAATGCTGCGTACACCATCAACATTGAAAAAATACTCGTACAGGTTGCCTTTCAGGATAGGTGTGCGCCACGACCAGACTCCTGCTTCGTCTTTGGTCATCGGGTGAATATTGTccgg < 2:1204294/140‑1 (MQ=255)
tAGTCATTGCGGCGCCTGTATCAATGCTGCGTACACCATCAACATTGAAAAAATACTCGTACAGGTTGCCTTTCAGGATAGGTGTGCGCCACGACCAGACTCCTGCTTCGTCTTTGGTCATCGGGTGAATATTGTccgga > 2:428389/1‑140 (MQ=255)
cATTGCGGCGCCTGTATCAATGCTGCGTACACCATCAACATTGAAAAAATACTCGTACAGGTTGCCTTTCAGGATAGGTGTGCGCCACGACCAGACTCCTGCTTCGTCTTTGGTCATCGGGTGAATATTGTccggaaccg < 2:603135/140‑1 (MQ=255)
aTTGCGGCGCCTGTATCAATGCTGCGTACACCATCAACATTGAAAAAATACTCGTACAGGTTGCCTTTCAGGATAGGTGTGCGCCACGACCAGACTCCTGCTTCGTCTTTGGTCATCGGGTGAATATTGTccggaaccgg > 2:1140620/1‑140 (MQ=255)
ttGCGGCGCCTGTATCAATGCTGCGTACACCATCAACATTGAAAAAATACTCGTACAGGTTGCCTTTCAGGATAGGTGTGCGCCACGACCAGACTCCTGCTTCGTCTTTGGTCATCGGGTGAATATTGTccggaaccgga < 2:659164/140‑1 (MQ=255)
ttGCGGCGCCTGTATCAATGCTGCGTACACCATCAACATTGAAAAAATACTCGTACAGGTTGCCTTTCAGGATAGGTGTGCGCCACGACCAGACTCCTGCTTCGTCTTTGGTCATCGGGTGAATATTGTccggaaccgga < 1:1347763/140‑1 (MQ=255)
ttGCGGCGCCTGTATCAATGCTGCGTACACCATCAACATTGAAAAAATACTCGTACAGGTTGCCTTTCAGGATAGGTGTGCGCCACGACCAGACTCCTGCTTCGTCTTTGGTCATCGGGTGAATATTGTccggaaccgga < 1:704014/140‑1 (MQ=255)
tGCGGCGCCTGTATCAATGCTGCGTACACCATCAACATTGAAAAAATACTCGTACAGGTTGCCTTTCAGGATAGGTGTGCGCCACGACCAGACTCCTGCTTCGTCTTTGGTCATCGGGTGAATATTGTccggaaccggaa > 2:1407897/1‑140 (MQ=255)
tGCGGCGCCTGTATCAATGCTGCGTACACCATCAACATTGAAAAAATACTCGTACAGGTTGCCTTTCAGGATAGGTGTGCGCCACGACCAGACTCCTGCTTCGTCTTTGGTCATCGGGTGAATATTGTccggaaccggaa < 1:428389/140‑1 (MQ=255)
tGCGGCGCCTGTATCAATGCTGCGTACACCATCAACATTGAAAAAATACTCGTACAGGTTGCCTTTCAGGATAGGTGTGCGCCACGACCAGACTCCTGCTTCGTCTTTGGTCATCGGGTGAATATTGTccggaaccggaa > 2:26065/1‑140 (MQ=255)
tGCGGCGCCTGTATCAATGCTGCGTACACCATCAACATTGAAAAAATACTCGTACAGGTTGCCTTTCAGGATAGGTGTGCGCCACGACCAGACTCCTGCTTCGTCTTTGGTCATCGGGTGAATATTGTccggaaccggaa > 2:729163/1‑140 (MQ=255)
tGCGGCGCCTGTATCAATGCTGCGTACACCATCAACATTGAAAAAATACTCGTACAGGTTGCCTTTCAGGATAGGTGTGCGCCACGACCAGACTCCTGCTTCGTCTTTGGTCATCGGGTGAATATTGTccggaaccggaa > 1:1175510/1‑140 (MQ=255)
tGCGGCGCCTGTATCAATGCTGCGTACACCATCAACATTGAAAAAATACTCGTACAGGTTGCCTTTCAGGATAGGTGTGCGCCACGACCAGACTCCTGCTTCGTCTTTGGTCATCGGGTGAATATTGTccggaaccggaa < 2:930314/140‑1 (MQ=255)
tGCGGCGCCTGTATCAATGCTGCGTACACCATCAACATTGAAAAAATACTCGTACAGGTTGCCTTTCAGGATAGGTGTGCGCCACGACCAGACTCCTGCTTCGTCTTTGGTCATCGGGTGAATATTGTccggaaccggaa > 2:439325/1‑140 (MQ=255)
cGGCGCCTGTATCAATGCTGCGTACACCATCAACATTGAAAAAATACTCGTACAGGTTGCCTTTCAGGATAGGTGTGCGCCACGACCAGACTCCTGCTTCGTCTTTGGTCATCGGGTGAATATTGTCCGGAACCGGAaca < 1:204535/140‑1 (MQ=255)
cGGCGCCTGTATCAATGCTGCGTACACCATCAACAATGAAAAAATACTCGTACAGGTTGCCTTTCAGGATAGGTGTGCGCCACGACCAGACTCCTGCTTCGTCTTTGGTCATCGGGTGAATATTGTCCGGAACCGGAaca < 1:402822/140‑1 (MQ=255)
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CGTTCAGATTGCAATGCGTTGGAGTGGTAAGTTATGGCGATCAAATCACCATGCGCAACAGAACGCGTATCCAGATAACTGCCTGGCACCAGAATCATACTGGAGTTAACCTGGCGCTGAGGATTAGTCATTGCGGTGCCTGTATCAATGCTGCGTACACCATCAACATTGAAAAAATACTCGTACAGGTTGCCTTTCAGGATAGGTGTGCGCCACGACCAGACTCCTGCTTCGTCTTTGGTCATCGGGTGAATATTGTCCGGAACCGGAACA > NC_000913/3900108‑3900380
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
