Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F28 I1 R1 163 52.9 1786516 99.3% 1774010 139.1

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 2,887,921 T→C Y131C (TAC→TGC)  cysH ← phosphoadenosine phosphosulfate reductase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,887,9210TC100.0% 217.4 / NA 62Y131C (TAC→TGC) cysHphosphoadenosine phosphosulfate reductase
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (25/37);  total (25/37)

GCCACGCTGAATTGCCAGCACCGGTAAATTGGCACGACTGCCGGATTGTTCACGGCGCAGGCCAGCAAACCAGGTTTGCGCATTCAGTTCTTTCAGAGCCCGGTTCATCGGTTCGACTTTGTTGATGTCATTGTACTTTTCAATGCCTTCAACGCCCTGCTCCCACAGTTTTCCGTAGCGTGCTTCCTGCCAGGCTGCGCTTTCGGTAGCACGGTACACTTTCAGGTTGAGCTTGAGTTTGTCCGTTAACTCGTCAATAAAGCGGT  >  NC_000913/2887788‑2888053
                                                                                                                                     |                                                                                                                                    
gCCACGCTGAATTGCCAGCACCGGTAAATTGGCACGACTGCCGGATTGTTCACGGCGCAGGCCAGCAAACCAGGTTTGCGCATTCAGTTCTTTCAGAGCCCGGTTCATCGGTTCGACTTTGTTGATGTCATTGCACtttt                                                                                                                                >  1:40120/1‑140 (MQ=255)
 ccACGCTGAATTGCCAGCACCGGTAAATTGGCACGACTGCCGGATTGTTCACGGCGCAGGCCAGCAAACCAGGTTTGCGCATTCAGTTCTTTCAGAGCCCGGTTCATCGGTTCGACTTTGTTGATGTCATTGCACTTTTc                                                                                                                               >  2:724057/1‑140 (MQ=255)
     gCTGAATTGCCAGCACCGGTAAATTGGCACGACTGCTGGATTGTTCACGGCGCAGGCCAGCAAACCAGGTTTGCGCATTCAGTTCTTTCAGAGCCCGGTTCATCGGTTCGACTTTGTTGATGTCATTGCACTTTTCAATg                                                                                                                           >  2:470833/1‑140 (MQ=255)
     gCTGAATTGCCAGCACCGGTAAATTGGCACGACTGCCGGATTGTTCACGGCGCAGGCCAGCAAACCAGGTTTGCGCATTCAGTTCTTTCAGAGCCCGGTTCATCGGTTCGACTTTGTTGATGTCATTGCACTTTTCAATg                                                                                                                           >  1:529769/1‑140 (MQ=255)
     gCTGAATTGCCAGCACCGGTAAATTGGCACGACTGCCGGATTGTTCACGGCGCAGGCCAGCAAACCAGGTTTGCGCATTCAGTTCTTTCAGAGCCCGGTTCATCGGTTCGACTTTGTTGATGTCATTGCACTTTTCAATg                                                                                                                           >  2:848687/1‑140 (MQ=255)
     gCTGAATTGCCAGCACCGGTAAATTGGCACGACTGCCGGATTGTTCACGGCGCAGGCCAGCAAACCAGGTTTGCGCATTCAGTTCTTTCAGAGCCCGGTTCATCGGTTCGACTTTGTTGATGTCATTGCACTTTTCAATg                                                                                                                           >  1:860454/1‑140 (MQ=255)
      cTGAATTGCCAGCACCGGTAAATTGGCACGACTGCCGGATTGTTCACGGCGCAGGCCAGCAAACCAGGTTTGCGCATTCAGTTCTTTCAGAGCCCGGTTCATCGGTTCGACTTTGTTGATGTCATTGCACTTTTCAATGc                                                                                                                          <  2:611347/140‑1 (MQ=255)
         aaTTGCCAGCACCGGTAAATTGGCACGACTGCCGGATTGTTCACGGCGCAGGCCAGCAAACCAGGTTTGCGCATTCAGTTCTTTCAGAGCCCGGTTCATCGGTTCGACTTTGTTGATGTCATTGCACTTTTCAATGCCtt                                                                                                                       >  1:880187/1‑140 (MQ=255)
            tGCCAGCACCGGTAAATTGGCACGACTGCCGGATTGTTCACGGCGCAGGCCAGCAAACCAGGTTTGCGCATTCAGTTCTTTCAGAGCCCGGTTCATCGGTTCGACTTTGTTGATGTCATTGCACTTTTCAATGCCTTCaa                                                                                                                    >  2:229302/1‑140 (MQ=255)
             gCCAGCACCGGTAAATTGGCACGACTGCCGGATTGTTCACGGTGCAGGCCAGCAAACCAGGTTTGCGCATTCAGTTCTTTCAGAGCCCGGTTCATCGGTTCGACTTTGTTGATGTCATTGCACTTTTCAATGCCTTCAAc                                                                                                                   <  1:462644/140‑1 (MQ=255)
              ccAGCACCGGTAAATTGGCACGACTGCCGGATTGTTCACGGCGCAGGCCAGCAAACCAGGTTTGCGCATTCAGTTCTTTCAGAGCCCGGTTCATCGGTTCGACTTTGTTGATGTCATTGCACTTTTCAATGCCTTCAACg                                                                                                                  >  2:39994/1‑140 (MQ=255)
              ccAGCACCGGTAAATTGGCACGACTGCCGGATTGTTCACGGCGCAGGCCAGCAAACCAGGTTTGCGCATTCAGTTCTTTCAGAGCCCGGTTCATCGGTTCGACTTTGTTGATGTCATTGCACTTTTCAATGCCTTCAACg                                                                                                                  >  1:880952/1‑140 (MQ=255)
                  cACCGGTAAATTGGCACGACTGCCGGATTGTTCACGGCGCAGGCCAGCAAACCAGGTTTGCGCATTCAGTTCTTTCAGAGCCCGGTTCATCGGTTCGACTTTGTTGATGTCATTGCACTTTTCAATGCCTTCAACGCCCt                                                                                                              <  1:623416/140‑1 (MQ=255)
                     cGGTAAATTGGCACGACTGCCGGATTGTTCACGGCGCAGGCCAGCAAACCAGGTTTGCGCATTCAGTTCTTTCAGAGCCCGGTTCATCGGTTCGACTTTGTTGATGTCATTACACTTTTCAATGCCTTCAACGCCCTGCt                                                                                                           >  2:722703/1‑140 (MQ=255)
                     cGGTAAATTGGCACGACTGCCGGATTGTTCACGGCGCAGGCCAACAAACCAGGTTTGCGCATTCAGTTCTTTCAGAGCCCGGTTCATCGGTTCGACTTTGTTGATGTCATTGCACTTTTCAATGCCTTCAACGCCCTGCt                                                                                                           >  2:199950/1‑140 (MQ=255)
                      ggTAAATTGGCACGACTGCCGGATTGTTCACGGCGCAGGCCAGCAAACCAGGTTTGCGCATTCAGTTCTTTCAGAGCCCGGTTCATCGGTTCGACTTTGTTGATGTCATTGCACTTTTCAATGCCTTCAACGCCCTGCTc                                                                                                          <  1:736756/140‑1 (MQ=255)
                        tAAATTGGCACGACTGCCGGATTGTTCACGGCGCAGGCCAGCAAACCAGGTTTGCGCATTCAGTTCTTTCAGAGCCCGGTTCATCGGTTCGACTTTGTTGATGTCATTGCACTTTTCAATGCCTTCAACGCCCTGCTccc                                                                                                        >  1:360796/1‑140 (MQ=255)
                         aaaTTGGCACGACTGCCGGATTGTTCACGGCGCAGGCCAGCAAACCAGGTTTGCGCATTCAGTTCTTTCAGAGCCCGGTTCATCGGTTCGACTTTGTTGATGTCATTGCACTTTTCAATGCCTTCAACGCCCTGCTCCca                                                                                                       <  1:857505/140‑1 (MQ=255)
                         aaaTTGGCACGACTGCCGGATTGTTCACGGCGCAGGCCAGCAAACCAGGTTTGCGCATTCAGTTCTTTCAGAGCCCGGTTCATCGGTTCGACTTTGTTGATGTCATTGCACTTTTCAATGCCTTCAACGCCCTGCTCCca                                                                                                       <  2:360796/140‑1 (MQ=255)
                         aaaTTGGCACGACTGCCGGATTGTTCACGGCGCAGGCCAGCAAACCAGGTTTGCGCATTCAGTTCTTTCAGAGCCCGGTTCATCGGTTCGACTTTGTTGATGTCATTGCACTTTTCAATGCCTTCAACGCCCTGCTCCca                                                                                                       <  2:209215/140‑1 (MQ=255)
                               gCACGACTGCCGGATTGTTCACGGCGCAGGCCAGCAAACCAGGTTTGCGCATTCAGTTCTTTCAGAGCCCGGTTCATCGGTTCGACTTTGTTGATGTCATTGCACTTTTCAATGCCTTCAACGCCCTGCTCCCACAGttt                                                                                                 >  2:532277/1‑140 (MQ=255)
                                   gACTGCCGGATTGTTCACGGCGCAGGCCAGCAAACCAGGTTTGCGCATTCAGTTCTTTCAGAGCCCGGTTCATCGGTTCGACTTTGTTGATGTCATTGCACTTTTCAATGCCTTCAACGCCCTGCTCCCACAGTTTTCCg                                                                                             <  2:860454/140‑1 (MQ=255)
                                       gCCGGATTGTTCACGGCGCAGGCCAGCAAACCAGGTTTGCGCATTCAGTTCTTTCAGAGCCCGGTTCATCGGTTCGACTTTGTTGATGTCATTGCACTTTTCAATGCCTTCAACGCCCTGCTCCCACAGTTTTCCGTAGc                                                                                         <  2:593829/140‑1 (MQ=255)
                                        ccGGATTGTTCACGGCGCAGGCCAGCAAACCAGGTTTGCGCATTCAGTTCTTTCAGAGCCCGGTTCATCGGTTCGACTTTGTTGATGTCATTGCACTTTTCAATGCCTTCAACGCCCTGCTCCCACAGTTTTCCGTAGCg                                                                                        <  2:225535/140‑1 (MQ=255)
                                        ccGGATTGTTCACGGCGCAGGCCAGCAAACCAGGTTTGCGCATTCAGTTCTTTCAGAGCCCGGTTCATCGGTTCGACTTTGTTGATGTCATTGCACTTTTCAATGCCTTCAACGCCCTGCTCCCACAGTTTTCCGTAGCg                                                                                        >  1:191404/1‑140 (MQ=255)
                                          ggATTGTTCACGGCGCAGGCCAGCAAACCAGGTTTGCGCATTCAGTTCTTTCAGAGCCCGGTTCATCGGTTCGACTTTGTTGATGTCATTGCACTTTTCAATGCCTTCAACGCCCTGCTCCCACAGTTTTCCGTAGCGTg                                                                                      <  1:811578/140‑1 (MQ=255)
                                            aTTGTTCACGGCGCAGGCCAGCAAACCAGGTTTGCGCATTCAGTTCTTTCAGAGCCCGGTTCATCGGTTCGACTTTGTTGATGTCATTGCACTTTTCAATGCCTTCAACGCCCTGCTCCCACAGTTTTCCGTAGCGTGCt                                                                                    <  2:529769/140‑1 (MQ=255)
                                            aTTGTTCACGGCGCAGGCCAGCAAACCAGGTTTGCGCATTCAGTTCTTTCAGAGCCCGGTTCATCGGTTCGACTTTGTTGATGTCATTGCACTTTTCAATGCCTTCAACGCCCTGCTCCCACAGTTTTCCGTAGCGTGCt                                                                                    <  1:256913/140‑1 (MQ=255)
                                            aTTGTTCACGGCGCAGGCCAGCAAACCAGGTTTGCGCATTCAGTTCTTTCAGAGCCCGGTTCATCGGTTCGACTTTGTTGATGTCATTGCACTTTTCAATGCCTTCAACGCCCTGCTCCCACAGTTTTCCGTAGCGTGCt                                                                                    <  2:140135/140‑1 (MQ=255)
                                                ttCACGGCGCAGGCCAGCAAACCAGGTTTGCGCATTCAGTTCTTTCAGAGCCCGGTTCATCGGTTCGACTTTGTTGATGTCATTGCACTTTTCAATGCCTTCAACGCCCTGCTCCCACAGTTTTCCGTAGCGTGCTTCCt                                                                                >  2:298364/1‑140 (MQ=255)
                                                 tCACGGCGCAGGCCAGCAAACCAGGTTTGCGCATTCAGTTCTTTCAGAGCCCGGTTCATCGGTTCGACTTTGTTGATGTCATTGCACTTTTCAATGCCTTCAACGCCCTGCTCCCACAGTTTTCCGTAGCGTGCTTCCTg                                                                               <  1:470833/140‑1 (MQ=255)
                                                 tCACGGCGCAGGCCAGCAAACCAGGTTTGCGCATTCAGTTCTTTCAGAGCCCGGTTCATCGGTTCGACTTTGTTGATGTCATTGCACTTTTCAATGCCTTCAACGCCCTGCTCCCACAGTTTTCCGTAGCGTGCTTCCTg                                                                               <  2:880952/140‑1 (MQ=255)
                                                        gcAGGCCAGCAAACCAGGTTTGCGCATTCAGTTCTTTCAGAGCCCGGTTCATCGGTTCGACTTTGTTGATGTCATTGCACTTTTCAATGCCTTCAACGCCCTGCTCCCACAGTTTTCCGTAGCGTGCTTCCTGCCAGGCt                                                                        <  2:40120/140‑1 (MQ=255)
                                                         cAGGCCAGCAAACCAGGTTTGCGCATTCAGTTCTTTCAGAGCCCGGTTCATCGGTTCGACTTTGTTGATGTCATTGCACTTTTCAATGCCTTCAACGCCCTGCTCCCACAGTTTTCCGTAGCGTGCTTCCTGCCAGGCTg                                                                       >  2:196575/1‑140 (MQ=255)
                                                             ccAGCAAACCAGGTTTGCGCATTCAGTTCTTTCAGAGCCCGGTTCATCGGTTCGACTTTGTTGATGTCATTGCACTTTTCAATGCCTTCAACGCCCTGCTCCCACAGTTTTCCGTAGCGTGCTTCCTGCCAGGCTGCGCt                                                                   <  2:767651/140‑1 (MQ=255)
                                                                    aCCAGGTTTGCGCATTCAGTTCTTTCAGAGCCCGGTTCATCGGTTCGACTTTGTTGATGTCATTGCACTTTTCAATGCCTTCAACGCCCTGCTCCCACAGTTTTCCGTAGCGTGCTTCCTGCCAGGCTGCGCTTTCGGTa                                                            <  2:538023/140‑1 (MQ=255)
                                                                       aGGTTTGCGCATTCAGTTCTTTCAGAGCCCGGTTCATCGGTTCGACTTTGTTGATGTCATTGCACTTTTCAATGCCTTCAACGCCCTGCTCCCACAGTTTTCCGTAGCGTGCTTCCTGCCAGGCTGCGCTTTCGGTAGCa                                                         <  1:848687/140‑1 (MQ=255)
                                                                       aGGTTTGCGCATTCAGTTCTTTCAGAGCCCGGTTCATCGGTTCGACTTTGTTGATGTCATTGCACTTTTCAATGCCTTCAACGCCCTGCTCCCACAGTTTTCCGTAGCGTGCTTCCTGCCAGGCTGCGCTTTCGGTAGCa                                                         <  2:568441/140‑1 (MQ=255)
                                                                        ggTTTGCGCATTCAGTTCTTTCAGAGCCCGGTTCATCGGTTCGACTTTGTTGATGTCATTGCACTTTTCAATGCCTTCAACGCCCTGCTCCCACAGTTTTCCGTAGCGTGCTTCCTGCCAGGCTGCGCTTTCGGTAGCAc                                                        <  2:357537/140‑1 (MQ=255)
                                                                            tGCGCATTCAGTTCTTTCAGAGCCCGGTTCATCGGTTCGACTTTGTTGATGTCATTGCACTTTTCAATGCCTTCAACGCCCTGCTCCCACAGTTTTCCGTAGCGTGCTTCCTGCCAGGCTGCGCTTTCGGTAGCACGGTa                                                    <  1:430435/140‑1 (MQ=255)
                                                                            tGCGCATTCAGTTCTTTCAGAGCCCGGTTCATCGGTTCGACTTTGTTGATGTCATTGCACTTTTCAATGCCTTCAACGCCCTGCTCCCACAGTTTTCCGTAGCGTGCTTCCTGCCAGGCTGCGCTTTCGGTAGCACGGTa                                                    <  2:569950/140‑1 (MQ=255)
                                                                              cgcATTCAGTTCTTTCAGAGCCCGGTTCATCGGTTCGACTTTGTTGATGTCATTGCACTTTTCAATGCCTTCAACGCCCTGCTCCCACAGTTTTCCGTAGCGTGCTTCCTGCCAGGCTGCGCTTTCGGTAGCACGGTaca                                                  <  2:889504/140‑1 (MQ=255)
                                                                                  ttCAGTTCTTTCAGAGCCCGGTTCATCGGTTCGACTTTGTTGATGTCATTGCACTTTTCAATGCCTTCAACGCCCTGCTCCCACAGTTTTCCGTAGCGTGCTTCCTGCCAGGCTGCGCTTTCGGTAGCACGGTACACttt                                              <  1:188358/140‑1 (MQ=255)
                                                                                      gTTCTTTCAGAGCCCGGTTCATCGGTTCGACTTTGTTGATGTCATTGCACTTTTCAATGCCTTCAACGCCCTGCTCCCACAGTTTTCCGTAGCGTGCTTCCTGCCAGGCTGCGCTTTCGGTAGCACGGTACACTTTCAgg                                          <  1:532277/140‑1 (MQ=255)
                                                                                        tCTTTCAGAGCCCGGTTCATCGGTTCGACTTTGTTGATGTCATTGCACTTTTCAATGCCTTCAACGCCCTGCTCCCACAGTTTTCCGTAGCGTGCTTCCTGCCAGGCTGCGCTTTCGGTAGCACGGTACACTTTCAGGtt                                        >  1:492965/1‑140 (MQ=255)
                                                                                             cAGAGCCCGGTTCATCGGTTCGACTTTGTTGATGTCATTGCACTTTTCAATGCCTTCAACGCCCTGCTCCCACAGTTTTCCGTAGCGTGCTTCCTGCCAGGCTGCGCTTTCGGTAGCACGGTACACTTTCAGGTTGAGCt                                   >  2:274578/1‑140 (MQ=255)
                                                                                             cAGAGCCCGGTTCATCGGTTCGACTTTGTTGATGTCATTGCACTTTTCAATGCCTTCAACGCCCTGCTCCCACAGTTTTCCGTAGCGTGCTTCCTGCCAGGCTGCGCTTTCGGTAGCACGGTACACTTTCAGGTTGAGCt                                   <  1:274578/140‑1 (MQ=255)
                                                                                              agagCCCGGTTCATCGGTTCGACTTTGTTGATGTCATTGCACTTTTCAATGCCTTCAACGCCCTGCTCCCACAGTTTTCCGTAGCGTGCTTCCTGCCAGGCTGCGCTTTCGGTAGCACGGTACACTTTCAGGTTGAGCtt                                  <  2:492965/140‑1 (MQ=255)
                                                                                                 gCCCGGTTCATCGGTTCGACTTTGTTGATGTCATTGCACTTTTCAATGCCTTCAACGCCCTGCTCCCACAGTTTTCCGTAGCGTGCTTCCTGCCAGGCTGCGCTTTCGGTAGCACGGTACACTTTCAGGTTGAGCTTGAg                               >  1:764332/1‑140 (MQ=255)
                                                                                                   ccGGTTCATCGGTTCGACTTTGTTGATGTCATTGCACTTTTCAATGCCTTCAACGCCCTGCTCCCACAGTTTTCCGTAGCGTGCTTCCTGCCAGGCTGCGCTTTCGGTAGCACGGTACACTTTCAGGTTGAGCTTGAGtt                             <  2:764332/140‑1 (MQ=255)
                                                                                                   ccGGTTCATCGGTTCGACTTTGTTGATGTCATTGCACTTTTCAATGCCTTCAACGCCCTGCTCCCACAGTTTTCCGTAGCGTGCTTCCTGCCAGGCTGCGCTTTCGGTAGCACGGTACACTTTCAGGTTGAGCTTGAGtt                             <  1:229302/140‑1 (MQ=255)
                                                                                                   ccGGTTCATCGGTTCGACTTTGTTGATGTCATTGCACTTTTCAATGCCTTCAACGCCCTGCTCCCACAGTTTTCCGTAGCGTGCTTCCTGCCAGGCTGCGCTTTCGGTAGCACGGTACACTTTCAGGTTGAGCTTGAGtt                             <  1:196575/140‑1 (MQ=255)
                                                                                                      gTTCATCGGTTCGACTTTGTTGATGTCATTGCACTTTTCAATGCCTTCAACGCCCTGCTCCCACAGTTTTCCGTAGCGTGCTTCCTGCCAGGCTGCGCTTTCGGTAGCACGGTACACTTTCAGGTTGAGCTTGAGTTTGt                          <  1:199950/140‑1 (MQ=255)
                                                                                                             ggTTCGACTTTGTTGATGTCATTGCACTTTTCAATGCCTTCAACGCCCTGCTCCCACAGTTTTCCGTAGCGTGCTTCCTGCCAGGCTGCGCTTTCGGTAGCACGGTACACTTTCAGGTTGAGCTTGAGTTTGTCCGTTaa                   <  1:39994/140‑1 (MQ=255)
                                                                                                               ttCGACTTTGTTGATGTCATTGCACTTTTCAATGCCTTCAACGCCCTGCTCCCACAGTTTTCCGTAGCGTGCTTCCTGCCAGGCTGCGCTTTCGGTAGCACGGTACACTTTCAGGTTGAGCTTGAGTTTGTCCGTTAACt                 >  1:475329/1‑140 (MQ=255)
                                                                                                               ttCGACTTTGTTGATGTCATTGCACTTTTCAATGCCTTCAACGCCCTGCTCCCACAGTTTTCCGTAGCGTGCTTCCTGCCAGGCTGCGCTTTCGGTAGCACGGTACACTTTCAGGTTGAGCTTGAGTTTGTCCGTTAACt                 <  2:880187/140‑1 (MQ=255)
                                                                                                                 cGACTTTGTTGATGTCATTGCACTTTTCAATGCCTTCAACGCCCTGCTCCCACAGTTTTCCGTAGCGTGCTTCCTGCCAGGCTGCGCTTTCGGTAGCACGGTACACTTTCAGGTTGAGCTTGAGTTTGTCCGTTAACTCg               >  1:708320/1‑140 (MQ=255)
                                                                                                                    cTTTGTTGATGTCATTGCACTTTTCAATGCCTTCAACGCCCTGCTCCCACAGTTTTCCGTAGCGTGCTTCCTGCCAGGCTGCGCTTTCGGTAGCACGGTACACTTTCAGGTTGAGCTTGAGTTTGTCCGTTAACTCGTCa            >  2:404276/1‑140 (MQ=255)
                                                                                                                       tgttgATGTCATTGCACTTTTCAATGCCTTCAACGCCCTGCTCCCACAGTTTTCCGTAGCGTGCTTCCTGCCAGGCTGCGCTTTCGGTAGCACGGTACACTTTCAGGTTGAGCTTGAGTTTGTCCGTTAACTCGTCAATa         >  1:467491/1‑140 (MQ=255)
                                                                                                                             tGTCATTGCACTTTTCAATGCCTTCAACGCCCTGCTCCCACAGTTTTCCGTAGCGTGCTTCCTGCCAGGCTGCGCTTTCGGTAGCACGGTACACTTTCAGGTTGAGCTTGAGTTTGTCCGTTAACTCGTCAATAAAGCgg   <  1:637549/140‑1 (MQ=255)
                                                                                                                              gTCATTGCACTTTTCAATGCCTTCAACGCCCTGCTCCCACAGTTTTCCGTAGCGTGCTTCCTGCCAGGCTGCGCTTTCGGTAGCACGGTACACTTTCAGGTTGAGCTTGAGTTTGTCCGTTAACTCGTCAATAAAGCGGt  <  2:351828/140‑1 (MQ=255)
                                                                                                                              gTCATTGCACTTTTCAATGCCTTCAACGCCCTGCTCCCACAGTTTTCCGTAGCGTGCTTCCTGCCAGGCTGCGCTTTCGGTAGCACGGTACACTTTCAGGTTGAGCTTGAGTTTGTCCGTTAACTCGTCAATAAAGCGGt  >  2:183426/1‑140 (MQ=255)
                                                                                                                                     |                                                                                                                                    
GCCACGCTGAATTGCCAGCACCGGTAAATTGGCACGACTGCCGGATTGTTCACGGCGCAGGCCAGCAAACCAGGTTTGCGCATTCAGTTCTTTCAGAGCCCGGTTCATCGGTTCGACTTTGTTGATGTCATTGTACTTTTCAATGCCTTCAACGCCCTGCTCCCACAGTTTTCCGTAGCGTGCTTCCTGCCAGGCTGCGCTTTCGGTAGCACGGTACACTTTCAGGTTGAGCTTGAGTTTGTCCGTTAACTCGTCAATAAAGCGGT  >  NC_000913/2887788‑2888053

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A