Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A11 F28 I1 R1 161 75.5 2581324 99.3% 2563254 138.8

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 1,554,497 T→C G391G (GGA→GGG)  maeA ← malate dehydrogenase, NAD‑requiring

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,554,4970TC100.0% 234.2 / NA 64G391G (GGA→GGG) maeAmalate dehydrogenase, NAD‑requiring
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (36/28);  total (36/28)

TCGGTCCAGGCGATAATGTCCTGCGGTGTGGCTTCCACGCGTGACGTCGGGTTAGACAGCGGCATCACGATCGGACGCGGACAGTGTTTATGCATCTCACGGATGATCTCTTCCGTAAACAGCCCGGTCTGTCCTGAGACGCCAATCAGAATATCTGGTTTTACATTGCGCACCACATCCAGCAGTGACAGCACATCGCTGTCGGTATCCCAGTCACTGAGGTTTTCGCGCTTCTGCACCAGTTTGGTCTGGAAAGGCAGCAGGTTC  >  NC_000913/1554366‑1554632
                                                                                                                                   |                                                                                                                                       
tCGGTCCAGGCGATAATGTCCTGCGGTGTGGCTTCCACGCGTGACGTCGGGTTAGACAGCGGCATCACGATCGGACGCGGACAGTGTTTATGCATCTCACGGATGATCTCTTCCGTAAACAGCCCGGTCTGCCCTGAGAc                                                                                                                                 >  2:160673/1‑140 (MQ=255)
    tCCAGGCGATAATGTCCTGCGGTGTGGCTTCCACGCGTGACGTCGGGTTAGACAGCGGCATCACGATCGGACGCGGACAGTGTTTATGCATCTCACGGATGATCTCTTCCGTAAACAGCCCGGTCTGCCCTGAGACGCCa                                                                                                                             >  2:1262866/1‑140 (MQ=255)
        ggCGATAATGTCCTGCGGTGTGGCTTCCACGCGTGACGTCGGGTTAGACAGCGGCATCACGATCGGACGCGGACAGTGTTTATGCATCTCACGGATGATCTCTTCCGTAAACAGCCCGGTCTGCCCTGAGACGCCAATCa                                                                                                                         <  1:710207/140‑1 (MQ=255)
             tAATGTCCTGCGGTGTGGCTTCCACGCGTGACGTCGGGTTAGACAGCGGCATCACGATCGGACGCGGACAGTGTTTATGCATCTCACGGATGATCTCTTCCGTAAACAGCCCGGTCTGCCCTGAGGCGCCAATCAGAata                                                                                                                    <  1:1150523/140‑1 (MQ=255)
             tAATGTCCTGCGGTGTGGCTTCCACGCGTGACGTCGGGTTAGACAGCGGCATCACGATCGGACGCGGACAGTGTTTATGCATCTCACGGATGATCTCTTCCGTAAACAGCCCGGTCTGCCCTGAGACGCCAATCAGAata                                                                                                                    <  1:318992/140‑1 (MQ=255)
              aaTGTCCTGCGGTGTGGCTTCCACGCGTGACGTCGGGTTAGACAGCGGCATCACGATCGGACGCGGACAGTGTTTATGCATCTCACGGATGATCTCTTCCGTAAACAGCCCGGTCTGCCCTGAGACGCCAATCAGAatat                                                                                                                   >  1:1219012/1‑140 (MQ=255)
              aaTGTCCTGCGGTGTGGCTTCCACGCGTGACGTCGGGTTAGACAGCGGCATCACGATCGGACGCGGACAGTGTTTATGCATCTCACGGATGATCTCTTCCGTAAACAGCCCGGTCTGCCCTGAGACGCCAATCAGAatat                                                                                                                   >  1:921845/1‑140 (MQ=255)
              aaTGTCCTGCGGTGTGGCTTCCACGCGTGACGTCGGGTTAGACAGCGGCATCACGATCGGACGCGGACAGTGTTTATGCATCTCACGGATGATCTCTTCCGTAAACAGCCCGGTCTGCCCTGAGACGCCAATCAGAata                                                                                                                    >  1:745655/1‑139 (MQ=255)
              aaTGTCCTGCGGTGTGGCTTCCACGCGTGACGTCGGGTTAGACAGCGGCATCACGATCGGACGCGGACAGTGTTTATGCATCTCACGGATGATCTCTTCCGTAAACAGCCCGGTCTGCCCTGAGACGCCAATCAGAata                                                                                                                    <  2:745655/139‑1 (MQ=255)
               aTGTCCTGCGGTGTGGCTTCCACGCGTGACGTCGGGTTAGACAGCGGCATCACGATCGGACGCGGACAGTGTTTATGCATCTCACGGATGATCTCTTCCGTAAACAGCCCGGTCTGCCCTGAGACGCCAATCAGAATATc                                                                                                                  <  2:921845/140‑1 (MQ=255)
                   ccTGCGGTGTGGCTTCCACGCGTGACGTCGGGTTAGACAGCGGCATCACGATCGGACGCGGACAGTGTTTATGCATCTCACGGATGATCTCTTCCGTAAACAGCCCGGTCTGCCCTGAGACGCCAATCAGAATATCTGGt                                                                                                              >  1:1063101/1‑140 (MQ=255)
                      gCGGTGTGGCTTCCACGCGTGACGTCGGGTTAGACAGCGGCATCACGATCGGACGCGGACAGTGTTTATGCATCTCACGGATGATCTCTTCCGTAAACAGCCCGGTCTGCCCTGAGACGCCAATCAGAATATCTGGtttt                                                                                                           >  2:1165010/1‑140 (MQ=255)
                       cGGTGTGGCTTCCACGCGTGACGTCGGGTTAGACAGCGGCATCACGATCGGACGCGGACAGTGTTTATGCATCTCACGGATGATCTCTTCCGTAAACAGCCCGGTCTGCCCTGAGACGCCAATCAGAATATCTGGTTTTa                                                                                                          >  2:217759/1‑140 (MQ=255)
                       cGGTGTGGCTTCCACGCGTGACGTCGGGTTAGACAGCGGCATCACGATCGGACGCGGACAGTGTTTATGCATCTCACGGATGATCTCTTCCGTAAACAGCCCGGTCTGCCCTGAGACGCCAATCAGAATATCTGGTTTTa                                                                                                          <  2:791956/140‑1 (MQ=255)
                       cGGTGTGGCTTCCACGCGTGACGTCGGGTTAGACAGCGGCATCACGATCGGACGCGGACAGTGTTTATGCATCTCACGGATGATCTCTTCCGTAAACAGCCCGGTCTGCCCTGAGACGCCAATCAGAATATCTGGTTTTa                                                                                                          <  2:1240587/140‑1 (MQ=255)
                           gtgGCTTCCACGCGTGACGTCGGGTTAGACAGCGGCATCACGATCGGACGCGGACAGTGTTTATGCATCTCACGGATGATCTCTTCCGTAAACAGCCCGGTCTGCCCTGAGACGCCAATCAGAATATCTGGTTTTACAtt                                                                                                      <  2:254671/140‑1 (MQ=255)
                            tgGCTTCCACGCGTGACGTCGGGTTAGACAGCGGCATCACGATCGGACGCGGACAGTGTTTATGCATCTCACGGATGATCTCTTCCGTAAACAGCCCGGTCTGCCCTGAGACGCCAATCAGAATATc                                                                                                                  <  2:581031/127‑1 (MQ=255)
                            tgGCTTCCACGCGTGACGTCGGGTTAGACAGCGGCATCACGATCGGACGCGGACAGTGTTTATGCATCTCACGGATGATCTCTTCCGTAAACAGCCCGGTCTGCCCTGAGACGCCAATCAGAATATc                                                                                                                  >  1:581031/1‑127 (MQ=255)
                            tgGCTTCCACGCGTGACGTCGGGTTAGACAGCGGCATCACGATCGGACGCGGACAGTGTTTATGCATCTCACGGATGATCTCTTCCGTAAACAGCCCGGTCTGCCCTGAGACGCCAATCAGAATATCTGGTTTTACATTg                                                                                                     >  1:831252/1‑140 (MQ=255)
                            tgGCTTCCACGCGTGACGTCGGGTTAGACAGCGGCATCACGATCGGACGCGGACAGTGTTTATGCATCTCACGGATGATCTCTTCCGTAAACAGCCCGGTCTGCCCTGAGACGCCAATCAGAATATCTGGTTTTACATTg                                                                                                     >  2:16042/1‑140 (MQ=255)
                            tgGCTTCCACGCGTGACGTCGGGTTAGACAGCGGCATCACGATCGGAAGCGGACAGTGTTTATGCATCTCACGGATGATCTCTTCCGTAAACAGCCCGGTCTGCCCTGAGACGCCAATCAGAATATCTGGTTTTACAttc                                                                                                     >  2:1075648/1‑139 (MQ=255)
                              gCTTCCACGCGTGACGTCGGGTTAGACAGCGGCATCACGATCGGACGCGGACAGTGTTTATGCATCTCACGGATGATCTCTTCCGTAAACAGCCCGGTCTGCCCTGAGACGCCAATCAGAATATCTGGTTTTACATTgcg                                                                                                   <  1:160673/140‑1 (MQ=255)
                                ttCCACGCGTGACGTCGGGTTAGACAGCGGCATCACGATCGGACGCGGACAGTGTTTATGCATCTCACGGATGATCTCTTCCGTAAACAGCCCGGTCTGCCCTGAGACGCCAATCAGAATATCTGGTTTTACATTGCGca                                                                                                 <  1:737810/140‑1 (MQ=255)
                                ttCCACGCGTGACGTCGGGTTAGACAGCGGCATCACGATCGGACGCGGACAGTGTTTATGCATCTCACGGATGATCTCTTCCGTAAACAGCCCGGTCTGCCCTGAGACGCCAATCAGAATATCTGGTTTTACATTGCGca                                                                                                 <  1:669973/140‑1 (MQ=255)
                                ttCCACGCGTGACGTCGGGTTAGACAGCGGCATCACGATCGGACGCGGACAGTGTTTATGCATCTCACGGATGATCTCTTCCGTAAACAGCCCGGTCTGCCCTGAGACGCCAATCAGAATATCTGGTTTTACATTGCGca                                                                                                 <  1:543245/140‑1 (MQ=255)
                                ttCCACGCGTGACGTCGGGTTAGACAGCGGCATCACGATCGGACGCGGACAGTGTTTATGCATCTCACGGATGATCTCTTCCGTAAACAGCCCGGTCTGCCCTGAGACGCCAATCAGAATATCTGGTTTTACATTGCGca                                                                                                 <  1:845753/140‑1 (MQ=255)
                                    aCGCGTGACGTCGGGTTAGACAGCGGCATCACGATCGGACGCGGACAGTGTTTATGCATCTCACGGATGATCTCTTCCGTAAACAGCCCGGTCTGCCCTGAGACGCCAATCAGAATATCTGGTTTTACATTGCGcaccac                                                                                             >  2:1268680/1‑140 (MQ=255)
                                     cgcgTGACGTCGGGTTAGACAGCGGCATCACGATCGGACGCGGACAGTGTTTATGCATCTCACGGATGATCTCTTCCGTAAACAGCCCGGTCTGCCCTGAGACGCCAATCAGAATATCTGGTTTTACATTGCGCACcaca                                                                                            <  2:1219012/140‑1 (MQ=255)
                                        gTGACGTCGGGTTAGACAGCGGCATCACGATCGGACGCGGACAGTGTTTATGCATCTCACGGATGATCTCTTCCGTAAACAGCCCGGTCTGCCCTGAGACGCCAATCAGAATATCTGGTTTTACATTGCGCACCACATcc                                                                                         >  2:801242/1‑140 (MQ=255)
                                         tGACGTCGGGTTAGACAGCGGCATCACGATCGGACGCGGACAGTGTTTATGCATCTCACGGATGATCTCTTCCGTAAACAGCCCGGTCTGCCCTGAGACGCCAATCAGAATATCTGGTTTTACATTGCGCACCACATCca                                                                                        <  1:1268680/140‑1 (MQ=255)
                                           aCGTCGGGTTAGACAGCGGCATCACGATCGGACGCGGACAGTGTTTATGCATCTCACGGATGATCTCTTCCGTAAACAGCCCGGTCTGCCCTGAGACGCCAATCAGAATATCTGGTTTTACATTGCGCACCACATCcagc                                                                                      <  1:1165010/140‑1 (MQ=255)
                                              tCGGGTTAGACAGCGGCATCACGATCGGACGCGGACAGTGTTTATGCATCTCACGGATGATCTCTTCCGTAAACAGCCCGGTCTGCCCTGAGACGCCAATCAGAATATCTGGTTTTACATTGCGCACCACATCCAGCAGt                                                                                   <  2:779779/140‑1 (MQ=255)
                                                           cGGCATCACGATCGGACGCGGACAGTGTTTATGCATCTCACGGATGATCTCTTCCGTAAACAGCCCGGTCTGCCCTGAGACGCCAATCAGAATATCTGGTTTTACATTGCGCACCACATCcagc                                                                                      <  1:826771/124‑1 (MQ=255)
                                                           cGGCATCACGATCGGACGCGGACAGTGTTTATGCATCTCACGGATGATCTCTTCCGTAAACAGCCCGGTCTGCCCTGAGACGCCAATCAGAATATCTGGTTTTACATTGCGCACCACATCcagc                                                                                      >  2:826771/1‑124 (MQ=255)
                                                           cGGCATCACGATCGGACGCGGACAGTGTTTATGCATCTCACGGATGATCTCTTCCGTAAACAGCCCGGTCTGCCCTGAGACGCCAATCAGAATATCTGGTTTTACATTGCGCACCACATCCAGCAGTGACAg                                                                              >  2:711966/1‑132 (MQ=255)
                                                           cGGCATCACGATCGGACGCGGACAGTGTTTATGCATCTCACGGATGATCTCTTCCGTAAACAGCCCGGTCTGCCCTGAGACGCCAATCAGAATATCTGGTTTTACATTGCGCACCACATCCAGCAGTGACAg                                                                              <  1:711966/132‑1 (MQ=255)
                                                           cGGCATCACGATCGGACGCGGACAGTGTTTATGCATCTCACGGATGATCTCTTCCGTAAACAGCCCGGTCTGCCCTGAGACGCCAATCAGAATATCTGGTTTTACATTGCGCACCACATCCAGCAGTGACAGCACATCGc                                                                      >  2:1156189/1‑140 (MQ=255)
                                                           cGGCATCACGATCGGACGCGGACAGTGTTTATGCATCTCACGGATGATCTCTTCCGTAAACAGCCCGGTCTGCCCTGAGACGCCAATCAGAATATCTGGTTTTACATTGCGCACCACATCCAGCAGTGACAGCACATCGc                                                                      >  1:706535/1‑140 (MQ=255)
                                                                  aCGATCGGACGCGGACAGTGTTTATGCATCTCACGGATGATCTCTTCCGTAAACAGCCCGGTCTGCCCTGAGACGCCAATCAGAATATCTGGTTTTACATTGCGCACCACATCCAGCAGTGACAGCACATCGCTGTCGGt                                                               <  2:255354/140‑1 (MQ=255)
                                                                  aCGATCGGACGCGGACAGTGTTTATGCATCTCACGGATGATCTCTTCCGTAAACAGCCCGGTCTGCCCTGAGACGCCAATCAGAATATCTGGTTTTACATTGCGCACCACATCCAGCAGTGACAGCACATCGCTGTCGGt                                                               <  1:217759/140‑1 (MQ=255)
                                                                         gACGCGGACAGTGTTTATGCATCTCACGGATGATCTCTTCCGTAAACAGCCCGGTCTGCCCTGAGACGCCAATCAGAATATCTGGTTTTACATTGCGCACCACATCCAGCAGTGACAGCACATCGCTGTCGGTATCCCAg                                                        >  1:805180/1‑140 (MQ=255)
                                                                           cgcgGACAGTGTTTATGCATCTCACGGATGATCTCTTCCGTAAACAGCCCGGTCTGCCCTGAGACGCCAATCAGAATATCTGGTTTTACATTGCGCACCACATCCAGCAGTGACAGCACATCGCTGTCGGTATCCCAGTc                                                      >  1:70734/1‑140 (MQ=255)
                                                                                    tgtTTATGCATCTCACGGATGATCTCTTCCGTAAACAGCCCGGTCTGCCCTGAGACGCCAATCAGAATATCTGGTTTTACATTGCGCACCACATCCAGCAGTGACAGCACATCGCTGTCGGTATCCCAGTCACTGAGGtt                                             >  1:1232185/1‑140 (MQ=255)
                                                                                    tgtTTATGCATCTCACGGATGATCTCTTCCGTAAACAGCCCGGTCTGCCCTGAGACGCCAATCAGAATATCTGGTTTTACATTGCGCACCACATCCAGCAGTGACAGCACATCGCTGTCGGTATCCCAGTCACTGAGGtt                                             >  1:481817/1‑140 (MQ=255)
                                                                                         aTGCATCTCACGGATGATCTCTTCCGTAAACAGCCCGGTCTGCCCTGAGACGCCAATCAGAATATCTGGTTTTACATTGCGCACCACATCCAGCAGTGACAGCACATCGCTGTCGGTATCCCAGTCACTGAGGTTTTcgc                                        >  2:450313/1‑140 (MQ=255)
                                                                                         aTGCATCTCACGGATGATCTCTTCCGTAAACAGCCCGGTCTGCCCTGAGACGCCAATCAGAATATCTGGTTTTACATTGCGCACCACATCCAGCAGTGACAGCACATCGCTGTCGGTATCCCAGTCACTGAGGTTTTcgc                                        <  2:595830/140‑1 (MQ=255)
                                                                                             aTCTCACGGATGATCTCTTCCGTAAACAGCCCGGTCTGCCCTGAGACGCCAATCAGAATATCTGGTTTTACATTGCGCACCACATCCAGCAGTGACAGCACATCGCTGTCGGTATCCCAGTCACTGAGGTTTTCGCGCtt                                    <  2:481817/140‑1 (MQ=255)
                                                                                             aTCTCACGGATGATCTCTTCCGTAAACAGCCCGGTCTGCCCTGAGACGCCAATCAGAATATCTGGTTTTACATTGCGCACCACATCCAGCAGTGACAGCACATCGCTGTCGGTATCCCAGTCACTGAGGTTTTCGCGCtt                                    <  2:706535/140‑1 (MQ=255)
                                                                                             aTCTCACGGATGATCTCTTCCGTAAACAGCCCGGTCTGCCCTGAGACGCCAATCAGAATATCTGGTTTTACATTGCGCACCACATCCAGCAGTGACAGCACATCGCTGTCGGTATCCCAGTCACTGAGGTTTTCGCGCtt                                    <  2:1232185/140‑1 (MQ=255)
                                                                                              tctcACGGATGATCTCTTCCGTAAACAGCCCGGTCTGCCCTGAGACGCCAATCAGAATATCTGGTTTTACATTGCGCACCACATCCAGCAGTGACAGCACATCGCTGTCGGTATCCCAGTCACTGAGGTTTTcg                                         <  2:79539/134‑1 (MQ=255)
                                                                                              tctcACGGATGATCTCTTCCGTAAACAGCCCGGTCTGCCCTGAGACGCCAATCAGAATATCTGGTTTTACATTGCGCACCACATCCAGCAGTGACAGCACATCGCTGTCGGTATCCCAGTCACTGAGGTTTTcg                                         >  1:79539/1‑134 (MQ=255)
                                                                                              tctcACGGATGATCTCTTCCGTAAACAGCCCGGTCTGCCCTGAGACGCCAATCAGAATATCTGGTTTTACATTGCGCACCACATCCAGCAGTGACAGCACATCGCTGTCGGTATCCCAGTCACTGAGGTTTTCGCGCTTc                                   >  2:214352/1‑140 (MQ=255)
                                                                                              tctcACGGATGATCTCTTCCGTAAACAGCCCGGTCTGCCCTGAGACGCCAATCAGAATATCTGGTTTTACATTGCGCACCACATCCAGCAGTGACAGCACATCGCTGTCGGTATCCCAGTCACTGAGGTTTTCGCGCTTc                                   >  2:135777/1‑140 (MQ=255)
                                                                                              tctcACGGATGATCTCTTCCGTAAACAGCCCGGTCTGCCCTGAGACGCCAATCAGAATATCTGGTTTTACATTGCGCACCACATCCAGCAGTGACAGCACATCGCTGTCGGTATCCCAGTCACTGAGGTTTTCGCGCTTc                                   >  2:498327/1‑140 (MQ=255)
                                                                                              tctcACGGATGATCTCTTCCGTAAACAGCCCGGTCTGCCCTGAGACGCCAATCAGAATATCTGGTTTTACATTGCGCACCACATCCAGCAGTGACAGCACATCGCTGTCGGTATCCCAGTCACTGAGGTTTTCGCGCTTc                                   >  2:945296/1‑140 (MQ=255)
                                                                                                                ccGTAAACAGCCCGGTCTGCCCTGAGACGCCAATCAGAATATCTGGTTTTACATTGCGCACCACATCCAGCAGTGACAGCACATCGCTGTCGGTATCCCAGTCACTGAGGTTTTCGCGCTTCTGCACCAGTTTGGTCTgg                 >  2:999135/1‑140 (MQ=255)
                                                                                                                ccGTAAACAGCCCGGTCTGCCCTGAGACGCCAATCAGAATATCTGGTTTTACATTGCGCACCACATCCAGCAGTGACAGCACATCGCTGTCGGTATCCCAGTCACTGAGGTTTTCGCGCTTCTGCACCAGTTTGGTCTgg                 >  2:1186852/1‑140 (MQ=255)
                                                                                                                        aGCCCGGTCTGCCCTGAGACGCCAATCAGAATATCTGGTTTTACATTGCGCACCACATCCAGCAGTGACAGCACATCGCTGTCGGTATCCCAGTCACTGAGGTTTTCGCGCTTCTGCACCAGTTTGGTCTGGAAAGgcag         >  2:215987/1‑140 (MQ=255)
                                                                                                                         gCCCGGTCTGCCCTGAGACGCCAATCAGAATATCTGGTTTTACATTGCGCACCACATCCAGCAGTGACAGCACATCGCTGTCGGTATCCCAGTCACTGAGGTTTTCGCGCTTCTGCACCAGTTTGGTCTGGAAAGgcagc        <  2:70734/140‑1 (MQ=255)
                                                                                                                          cccGGTCTGCCCTGAGACGCCAATCAGAATATCTGGTTTTACATTGCGCACCACATCCAGCAGTGACAGCACATCGCTGTCGGTATCCCAGTCACTGAGGTTTTCGCGCTTCTGCACCAGTTTGGTCTGGAAAGgcagca       >  2:359131/1‑140 (MQ=255)
                                                                                                                          cccGGTCTGCCCTGAGACGCCAATCAGAATATCTGGTTTTACATTGCGCACCACATCCAGCAGTGACAGCACATCGCTGTCGGTATCCCAGTCACTGAGGTTTTCGCGCTTCTGCACCAGTTTGGTCTGGAAAGgcagca       >  1:1040112/1‑140 (MQ=255)
                                                                                                                          cccGGTCTGCCCTGAGACGCCAATCAGAATATCTGGTTTTACATTGCGCACCACATCCAGCAGTGACAGCACATCGCTGTCGGTATCCCAGTCACTGAGGTTTTCGCGCTTCTGCACCAGTTTGGTCTGGAAAGgcagca       >  1:1161925/1‑140 (MQ=255)
                                                                                                                          cccGGTCTGCCCTGAGACGCCAATCAGAATATCTGGTTTTACATTGCGCACCACATCCAGCAGTGACAGCACATCGCTGTCGGTATCCCAGTCACTGAGGTTTTCGCGCTTCTGCACCAGTTTGGTCTGGAAAGgcagca       >  2:1034760/1‑140 (MQ=255)
                                                                                                                               tCTGCCCTGAGACGCCAATCAGAATATCTGGTTTTACATTGCGCACCACATCCAGCAGTGACAGCACATCGCTGTCGGTATCCCAGTCACTGAGGTTTTCGCGCTTCTGCACCAGTTTGGTCTGGAAAGGCAGCAGGTTc  >  2:330526/1‑140 (MQ=255)
                                                                                                                                   |                                                                                                                                       
TCGGTCCAGGCGATAATGTCCTGCGGTGTGGCTTCCACGCGTGACGTCGGGTTAGACAGCGGCATCACGATCGGACGCGGACAGTGTTTATGCATCTCACGGATGATCTCTTCCGTAAACAGCCCGGTCTGTCCTGAGACGCCAATCAGAATATCTGGTTTTACATTGCGCACCACATCCAGCAGTGACAGCACATCGCTGTCGGTATCCCAGTCACTGAGGTTTTCGCGCTTCTGCACCAGTTTGGTCTGGAAAGGCAGCAGGTTC  >  NC_000913/1554366‑1554632

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A