Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A11 F28 I1 R1	161	75.5	2581324	99.3%	2563254	138.8

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,585,711	T→C	N259S (AAC→AGC)	ydeP ←	putative oxidoreductase YdeP

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,585,711	0	T	C	100.0%	227.7 / NA	62	N259S (AAC→AGC)	ydeP	putative oxidoreductase YdeP
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (34/28); total (34/28)

GCGGCGCTTGCAGCATCATCGCGCTCAATTAACAGGCGCATCATCCCCTTGAGCAACGCCATATCGCCACCAATGCGCACGTTATAGTAGGCACTGGCCAACTGAGTCTCAGAGTTCGTCAGCATTTCAAACGGGTTTTGCGGTGCGGTAAATCGCTCCAGGCCACGTTCCTGTAGAGGATTGATGGCGATCATTTTCGCTCCCCGTTTCACTAAAGCGCGCAACGAAGTCAGCATGCGAGGGTGGTTTGTACCAGGGTTATGCCCAATGCA  >  NC_000913/1585576‑1585847

gcggcgCTTGCAGCATCATCGCGCTCAATTAACAGGCGCATCATCCCCTTGAGCAACGCCATATCGCCACCAATGCGCACGTTATAGTAGGCACTGGCCAACTGAGTCTCAGAGTTCGTCAGCATTTCAAACGGGCTTtg                                                                                                                                      <  2:1225413/140‑1 (MQ=255)

                   cgcgCTCAATTAACAGGCGCATCATCCCCTTGAGCAACGCCATATCGCCACCAATGCGCACGTTATAGTAGGCACTGGCCAACTGAGTCTCAGAGTTCGTCAGCATTTCAAACGGGCTTTGCGGTGCGGTAAATCGCTcc                                                                                                                   >  2:658833/1‑140 (MQ=255)

                     cgcTCAATTAACAGGCGCATCATCCCCTTGAGCAACGCCATATCGCCACCAATGCGCACGTTATAGTAGGCACTGGCCAACTGAGTCTCAGAGTTCGTCAGCATTTCAAACGGGCTTTGCGGTGCGGTAAATCGCTCCAg                                                                                                                 >  1:1035738/1‑140 (MQ=255)

                       cTCAATTAACAGGCGCATCATCCCCTTGAGCAACGCCATATCGCCACCAATGCGCACGTTATAGTAGGCACTGGCCAACTGAGTCTCAGAGTTCGTCAGCATTTCAAACGGGCTTTGCGGTGCGGTAAATCGCTCCAGGc                                                                                                               >  2:302009/1‑140 (MQ=255)

                       cTCAATTAACAGGCGCATCATCCCCTTGAGCAACGCCATATCGCCACCAATGCGCACGTTATAGTAGGCACTGGCCAACTGAGTCTCAGAGTTCGTCAGCATTTCAAACGGGCTTTGCGGTGCGGTAAATCGCTCCAGGc                                                                                                               <  1:302009/140‑1 (MQ=255)

                          aaTTAACAGGCGCATCATCCCCTTGAGCAACGCCATATCGCCACCAATGCGCACGTTATAGTAGGCACTGGCCAACTGAGTCTCAGAGTTCGTCAGCATTTCAAACGGGCTTTGCGGTGCGGTAAATCGCTCCAGGCCAc                                                                                                            <  2:812264/140‑1 (MQ=255)

                              aaCAGGCGCATCATCCCCTTGAGCAACGCCATATCGCCACCAATGCGCACGTTATAGTAGGCACTGGCCAACTGAGTCTCAGAGTTCGTCAGCATTTCAAACGGGCTTTGCGGTGCGGTAAATCGCTCCAGGCCACGTTc                                                                                                        <  1:506894/140‑1 (MQ=255)

                                    cgcATCATCCCCTTGAGCAACGCCATATCGCCACCAATGCGCACGTTATAGTAGGCACTGGCCAACTGAGTCTCAGAGTTCGTCAGCATTTCAAACGGGCTTTGCGGTGCGGTAAATCGCTCCAGGCCACGTTCCTGTag                                                                                                  <  2:1214716/140‑1 (MQ=255)

                                    cgcATCATCCCCTTGAGCAACGCCATATCGCCACCAATGCGCACGTTATAGTAGGCACTGGCCAACTGAGTCTCAGAGTTCGTCAGCATTTCAAACGGGCTTTGCGGTGCGGTAAATCGCTCCAGGCCACGTTCCTGTag                                                                                                  >  1:1174936/1‑140 (MQ=255)

                                    cgcATCATCCCCTTGAGCAACGCCATATCGCCACCAATGCGCACGTTATAGTAGGCACTGGCCAACTGAGTCTCAGAGTTCGTCAGCATTTCAAACGGGCTTTGCGGTGCGGTAAATCGCTCCAGGCCACGTTCCTGTag                                                                                                  >  2:600432/1‑140 (MQ=255)

                                      catcatCCCCTTGAGCAACGCCATATCGCCACCAATGCGCACGTTATAGTAGGCACTGGCCAACTGAGTCTCAGAGTTCGTCAGCATTTCAAACGGGCTTTGCGGTGCGGTAAATCGCTCCAGGCCACGTTCCTGTagag                                                                                                >  1:372971/1‑140 (MQ=255)

                                                 tGAGCAACGCCATATCGCCACCAATGCGCACGTTATAGTAGGCACTGGCCAACTGAGTCTCAGAGTTCGTCAGCATTTCAAACGGGCTTTGCGGTGCGGTAAATCGCTCCAGGCCACGTTCCTGTAGAGGATTGATGGCg                                                                                     >  2:919479/1‑140 (MQ=255)

                                                 tGAGCAACGCCATATCGCCACCAATGCGCACGTTATAGTAGGCACTGGCCAACTGAGTCTCAGAGTTCGTCAGCATTTCAAACGGGCTTTGCGGTGCGGTAAATCGCTCCAGGCCACGTTCCTGTAGAGGATTGATGGCg                                                                                     >  1:285077/1‑140 (MQ=255)

                                                   aGCAACGCCATATCGCCACCAATGCGCACGTTATAGTAGGCACTGGCCAACTGAGTCTCAGAGTTCGTCAGCATTTCAAACGGGCTTTGCGGTGCGGTAAATCGCTCCAGGCCACGTTCCTGTAGAGGATTGATGGCGAt                                                                                   >  2:791871/1‑140 (MQ=255)

                                                    gCAACGCCATATCGCCACCAATGCGCACGTTATAGTAGGCACTGGCCAACTGAGTCTCAGAGTTCGTCAGCATTTCAAACGGGCTTTGCGGTGCGGTAAATCGCTCCAGGCCACGTTCCTGTAGAGGATTGATGGCGATc                                                                                  >  2:122048/1‑140 (MQ=255)

                                                        cGCCATATCGCCACCAATGCGCACGTTATAGTAGGCACTGGCCAACTGAGTCTCAGAGTTCGTCAGCATTTCAAACGGGCTTTGCGGTGCGGTAAATCGCTCCAGGCCACGTTCCTGTAGAGGATTGATGGCGATCAttt                                                                              >  1:145393/1‑140 (MQ=255)

                                                           cATATCGCCACCAATGCGCACGTTATAGTAGGCACTGGCCAACTGAGTCTCAGAGTTCGTCAGCATTTCAAACGGGCTTTGCGGTGCGGTAAATCGCTCCAGGCCACGTTCCTGTAGAGGATTGATGGCGATCATTTTCg                                                                           <  1:658833/140‑1 (MQ=255)

                                                                cGCCACCAATGCGCACGTTATAGTAGGCACTGGCCAACTGAGTCTCAGAGTTCGTCAGCATTTCAAACGGGCTTTGCGGTGCGGTAAATCGCTCCAGGCCACGTTCCTGTAGAGGATTGATGGCGATCATTTTCGCTccc                                                                      <  1:600432/140‑1 (MQ=255)

                                                                  ccaccaATGCGCACGTTATAGTAGGCACTGGCCAACTGAGTCTCAGAGTTCGTCAGCATTTCAAACGGGCTTTGCGGTGCGGTAAATCGCTCCAGGCCACGTTCCTGTAGAGGATTGATGGCGATCATTTTCGCTCCCCg                                                                    <  2:847742/140‑1 (MQ=255)

                                                                   caccaATGCGCACGTTATAGTAGGCACTGGCCAACTGAGTCTCAGAGTTCGTCAGCATTTCAAACGGGCTTTGCGGTGCGGTAAATCGCTCCAGGCCACGTTCCTGTAGAGGATTGATGGCGATCATTTTCGCTCCCCGt                                                                   >  2:644861/1‑140 (MQ=255)

                                                                         tGCGCACGTTATAGTAGGCACTGGCCAACTGAGTCTCAGAGTTCGTCAGCATTTCAAACGGGCTTTGCGGTGCGGTAAATCGCTCCAGGCCACGTTCCTGTAGAGGATTGATGGCGATCATTTTCGCTCCCCg                                                                    <  1:826279/133‑1 (MQ=255)

                                                                         tGCGCACGTTATAGTAGGCACTGGCCAACTGAGTCTCAGAGTTCGTCAGCATTTCAAACGGGCTTTGCGGTGCGGTAAATCGCTCCAGGCCACGTTCCTGTAGAGGATTGATGGCGATCATTTTCGCTCCCCg                                                                    >  2:826279/1‑133 (MQ=255)

                                                                              aCGTTATAGTAGGCACTGGCCAACTGAGTCTCAGAGTTCGTCAGCATTTCAAACGGGCTTTGCGGTGCGGTAAATCGCTCCAGGCCACGTTCCTGTAGAGGATTGATGGCGATCATTTTCGCTCCCCGTTTCACTAAAgc                                                        <  2:1113473/140‑1 (MQ=255)

                                                                                   ataGTAGGCACTGGCCAACTGAGTCTCAGAGTTCGTCAGCATTTCAAACGGGCTTTGCGGTGCGGTAAATCGCTCCAGGCCACGTTCCTGTAGAGGATTGATGGCGATCATTTTCGCTCCCCGTTTCACTAAAGCGCGCa                                                   >  1:630249/1‑140 (MQ=255)

                                                                                          gCACTGGCCAACTGAGTCTCAGAGTTCGTCAGCATTTCAAACGGGCTTTGCGGTGCGGTAAATCGCTCCAGGCCACGTTCCTGTAGAGGATTGATGGCGATCATTTTCGCTCCCCGTTTCACTAAAGCGCGCAACg                                                >  2:649673/1‑136 (MQ=255)

                                                                                          gCACTGGCCAACTGAGTCTCAGAGTTCGTCAGCATTTCAAACGGGCTTTGCGGTGCGGTAAATCGCTCCAGGCCACGTTCCTGTAGAGGATTGATGGCGATCATTTTCGCTCCCCGTTTCACTAAAGCGCGCAACg                                                <  1:649673/136‑1 (MQ=255)

                                                                                          gCACTGGCCAACTGAGTCTCAGAGTTCGTCAGCATTTCAAACGGGCTTTGCGGTGCGGTAAATCGCTCCAGGCCACGTTCCTGTAGAGGATTGATGGCGATCATTTTCGCTCCCCGTTTCACTAAAGCGCGCAACGAAGt                                            >  1:199361/1‑140 (MQ=255)

                                                                                          gCACTGGCCAACTGAGTCTCAGAGTTCGTCAGCATTTCAAACGGGCTTTGCGGTGCGGTAAATCGCTCCAGGCCACGTTCCTGTAGAGGATTGATGGCGATCATTTTCGCTCCCCGTTTCACTAAAGCGCGCAACGAAGt                                            >  2:1082172/1‑140 (MQ=255)

                                                                                          gCACTGGCCAACTGAGTCTCAGAGTTCGTCAGCATTTCAAACGGGCTTTGCGGTGCGGTAAATCGCTCCAGGCCACGTTCCTGTAGAGGATTGATGGCGATCATTTTCGCTCCCCGTTTCACTAAAGCGCGCAACGAAGt                                            >  2:1144998/1‑140 (MQ=255)

                                                                                            aCTGGCCAACTGAGTGTCAGAGTTCGTCAGCATTTCAAACGGGCTTTGCGGTGCGGTAAATCGCTCCAGGCCACGTTCCTGTAGAGGATTGATGGCGATCATTTTCGCTCCCCGTTTCACTAAAGCGCGCAACGAAGTCa                                          >  2:494290/1‑140 (MQ=255)

                                                                                            aCTGGCCAACTGAGTGTCAGAGTTCGTCAGCATTTCAAACGGGCTTTGCGGTGCGGTAAATCGCTCCAGGCCACGTTCCTGTAGAGGATTGATGGCGATCATTTTCGCTCCCCGTTTCACTAAAGCGCGCAACGAAGTCa                                          <  1:494290/140‑1 (MQ=255)

                                                                                            aCTGGCCAACTGAGTCTCAGAGTTCGTCAGCATTTCAAACGGGCTTTGCGGTGCGGTAAATCGCTCCAGGCCACGTTCCTGTAGAGGATTGATGGCGATCATTTTCGCTCCCCGTTTCACTAAAGCGCGCAACGAAGTCa                                          >  1:96148/1‑140 (MQ=255)

                                                                                            aCTGGCCAACTGAGTCTCAGAGTTCGTCAGCATTTCAAACGGGCTTTGCGGTGCGGTAAATCGCTCCAGGCCACGTTCCTGTAGAGGATTGATGGCGATCATTTTCGCTCCCCGTTTCACTAAAGCGCGCAACGAAGTCa                                          <  2:1174936/140‑1 (MQ=255)

                                                                                            aCTGGCCAACTGAGTCTCAGAGTTCGTCAGCATTTCAAACGGGCTTTGCGGTGCGGTAAATCGCTCCAGGCCACGTTCCTGTAGAGGATTGATGGCGATCATTTTCGCTCCCCGTTTCACTAAAGCGCGCAACGAAGTCa                                          >  1:1088804/1‑140 (MQ=255)

                                                                                            aCTGGCCAACTGAGTCTCAGAGTTCGTCAGCATTTCAAACGGGCTTTGCGGTGCGGTAAATCGCTCCAGGCCACGTTCCTGTAGAGGATTGATGGCGATCATTTTCGCTCCCCGTTTCACTAAAGCGCGCAACGAAGTCa                                          >  1:270915/1‑140 (MQ=255)

                                                                                            aCTGGCCAACTGAGTCTCAGAGTTCGTCAGCATTTCAAACGGGCTTTGCGGTGCGGTAAATCGCTCCAGGCCACGTTCCTGTAGAGGATTGATGGCGATCATTTTCGCTCCCCGTTTCACTAAAGCGCGCAACGAAGTCa                                          >  1:647429/1‑140 (MQ=255)

                                                                                              tGGCCAACTGAGTCTCAGAGTTCGTCAGCATTTCAAACGGGCTTTGCGGTGCGGTAAATCGCTCCAGGCCACGTTCCTGTAGAGGATTGATGGCGATCATTTTCGCTCCCCGTTTCACTAAAGCGCGCAACGAAGTCAGc                                        >  1:1076948/1‑140 (MQ=255)

                                                                                               ggCCAACTGAGTCTCAGAGTTCGTCAGCATTTCAAACGGGCTTTGCGGTGCGGTAAATCGCTCCAGGCCACGTTCCTGTAGAGGATTGATGGCGATCATTTTCGCTCCCCGTTTCACTAAAGCGCGCAACGAAGTCAGCa                                       >  2:578749/1‑140 (MQ=255)

                                                                                                gCCAACTGAGTCTCAGAGTTCGTCAGCATTTCAAACGGGCTTTGCGGTGCGGTAAATCGCTCCAGGCCACGTTCCTGTAGAGGATTGATGGCGATCATTTTCGCTCCCCGTTTCACTAAAGCGCGCAACGAAGTCAGCAt                                      >  2:1267203/1‑140 (MQ=255)

                                                                                                gCCAACTGAGTCTCAGAGTTCGTCAGCATTTCAAACGGGCTTTGCGGTGCGGTAAATCGCTCCAGGCCACGTTCCTGTAGAGGATTGATGGCGATCATTTTCGCTCCCCGTTTCACTAAAGCGCGCAACGAAGTCAGCAt                                      >  2:403667/1‑140 (MQ=255)

                                                                                                gCCAACTGAGTCTCAGAGTTCGTCAGCATTTCAAACAGGCTTTGCGGTGCGGTAAATCGCTCCAGGCCACGTTCCTGTAGAGGATTGATGGCGATCATTTTCGCTCCCCGTTTCACTAAAgcgc                                                      <  1:526494/124‑1 (MQ=255)

                                                                                                gCCAACTGAGTCTCAGAGTTCGTCAGCATTTCAAACAGGCTTTGCGGTGCGGTAAATCGCTCCAGGCCACGTTCCTGTAGAGGATTGATGGCGATCATTTTCGCTCCCCGTTTCACTAAAgcgc                                                      >  2:526494/1‑124 (MQ=255)

                                                                                                 ccAACTGAGTCTCAGAGTTCGTCAGCATTTCAAACGGGCTTTGCGGTGCGGTAAATCGCTCCAGGCCACGTTCCTGTAGAGGATTGATGGCGATCATTTTCGCTCCCCGTTTCACTAAAGCGCGCAACGAAGTCAGCATg                                     <  2:1035738/140‑1 (MQ=255)

                                                                                                 ccAACTGAGTCTCAGAGTTCGTCAGCATTTCAAACGGGCTTTGCGGTGCGGTAAATCGCTCCAGGCCACGTTCCTGTAGAGGATTGATGGCGATCATTTTCGCTCCCCGTTTCACTAAAGCGCGCAACGAAGTCAGCATg                                     >  2:42917/1‑140 (MQ=255)

                                                                                                       gAGTCTCAGAGTTCGTCAGCATTTCAAACGGGCTTTGCGGTGCGGTAAATCGCTCCAGGCCACGTTCCTGTAGAGGATTGATGGCGATCATTTTCGCTCCCCGTTTCACTAAAGCGCGCAACGAAGTCAGCATGCGAggg                               <  1:803597/140‑1 (MQ=255)

                                                                                                       gAGTCTCAGAGTTCGTCAGCATTTCAAACGGGCTTTGCGGTGCGGTAAATCGCTCCAGGCCACGTTCCTGTAGAGGATTGATGGCGATCATTTTCGCTCCCCGTTTCACTAAAGCGCGCAACGAAGTCAGCATGCGAggg                               <  2:372971/140‑1 (MQ=255)

                                                                                                       gAGTCTCAGAGTTCGTCAGCATTTCAAACGGGCTTTGCGGTGCGGTAAATCGCTCCAGGCCACGTTCCTGTAGAGGATTGATGGCGATCATTTTCGCTCCCCGTTTCACTAAAGCGCGCAACGAAGTCAGCATGCGAggg                               <  1:919479/140‑1 (MQ=255)

                                                                                                       gAGTCTCAGAGTTCGTCAGCATTTCAAACGGGCTTTGCGGTGCGGTAAATCGCTCCAGGCCACGTTCCTGTAGAGGATTGATGGCGATCATTTTCGCTCCCCGTTTCACTAAAGCGCGCAACGAAGTCAGCATGCGAggg                               <  1:973582/140‑1 (MQ=255)

                                                                                                        aGTCTCAGAGTTCGTCAGCATTTCAAACGGGCTTTGCGGTGCGGTAAATCGCTCCAGGCCACGTTCCTGTAGAGGATTGATGGCGATCATTTTCGCTCCCCGTTTCACTAAAGCGCGCAACGAAGTCAGCATGCGAGggt                              <  2:96148/140‑1 (MQ=255)

                                                                                                          tctcAGAGTTCGTCAGCATTTCAAACGGGCTTTGCGGTGCGGTAAATCGCTCCAGGCCACGTTCCTGTAGAGGATTGATGGCGATCATTTTCGCTCCCCGTTTCACTAAAGCGCGCAACGAAGTCAGCATGCGAGggtgg                            >  1:757311/1‑140 (MQ=255)

                                                                                                                  ttCGTCAGCATTTCAAACGGGCTTTGCGGTGCGGTAAATCGCTCCAGGCCACGTTCCTGTAGAGGATTGATGGCGATCATTTTCGCTCCCCGTTTCACTAAAGCGCGCAACGAAGTCAGCATGCGAGGGTGGTTTGTAcc                    <  2:285077/140‑1 (MQ=255)

                                                                                                                  ttCGTCAGCATTTCAAACGGGCTTTGCGGTGCGGTAAATCGCTCCAGGCCACGTTCCTGTAGAGGATTGATGGCGATCATTTTCGCTCCCCGTTTCACTAAAGCGCGCAACGAAGTCAGCATGCGAGGGTGGTTTGTAcc                    >  1:305382/1‑140 (MQ=255)

                                                                                                                   tCGTCAGCATTTCAAACGGGCTTTGCGGTGCGGTAAATCGCTCCAGGCCACGTTCCTGTAGAGGATTGATGGCGATCATTTTCGCTCCCCGTTTCACTAAAGCGCGCAACGAAGTCAGCATGCGAGGGTGGTTTGTACCa                   <  1:42917/140‑1 (MQ=255)

                                                                                                                    cGTCAGCATTTCAAACGGGCTTTGCGGTGCGGTAAATCGCTCCAGGCCACGTTCCTGTAGAGGATTGATGGCGATCATTTTCGCTCCCCGTTTCACTAAAGCGCGCAACGAAGTCAGCATGCGAGggtggt                           <  2:999083/131‑1 (MQ=255)

                                                                                                                    cGTCAGCATTTCAAACGGGCTTTGCGGTGCGGTAAATCGCTCCAGGCCACGTTCCTGTAGAGGATTGATGGCGATCATTTTCGCTCCCCGTTTCACTAAAGCGCGCAACGAAGTCAGCATGCGAGggtggt                           >  1:999083/1‑131 (MQ=255)

                                                                                                                      tCAGCATTTCAAACGGGCTTTGCGGTGCGGTAAATCGCTCCAGGCCACGTTCCTGTAGAGGATTGATGGCGATCATTTTCGCTCCCCGTTTCACTAAAGCGCGCAACGAAGTCAGCATGCGAGGGTGGTTTGTACCAggg                >  1:565120/1‑140 (MQ=255)

                                                                                                                        aGCATTTCAAACGGGCTTTGCGGTGCGGTAAATCGCTCCAGGCCACGTTCCTGTAGAGGATTGATGGCGATCATTTTCGCTCCCCGTTTCACTAAAGCGCGCAACGAAGTCAGCATGCGAGGGTGGTTTGTACCAGGGtt              <  2:1088804/140‑1 (MQ=255)

                                                                                                                          cATTTCAAACGGGCTTTGCGGTGCGGTAAATCGCTCCAGGCCACGTTCCTGTAGAGGATTGATGGCGATCATTTTCGCTCCCCGTTTCACTAAAGCGCGCAACGAAGTCAGCATGCGAGGGTGGTTTGTACCAGGGTTAt            >  2:988973/1‑140 (MQ=255)

                                                                                                                                  aCGGGCTTTGCGGTGCGGTAAATCGCTCCAGGCCACGTTCCTGTAGAGGATTGATGGCGATCATTTTCGCTCCCCGTTTCACTAAAGCGCGCAACGAAGTCAGCATGCGAGGGTGGTTTGTACCAGGGTTATGCCCAATg    <  1:1267203/140‑1 (MQ=255)

                                                                                                                                    gggCTTTGCGGTGCGGTAAATCGCTCCAGGCCACGTTCCTGTAGAGGATTGATGGCGATCATTTTCGCTCCCCGTTTCACTAAAGCGCGCAACGAAGTCAGCATGCGAGGGTGGTTTGTACCAGGGTTATGCCCAATGCa  <  2:757311/140‑1 (MQ=255)

                                                                                                                                    gggCTTTGCGGTGCGGTAAATCGCTCCAGGCCACGTTCCTGTAGAGGATTGATGGCGATCATTTTCGCTCCCCGTTTCACTAAAGCGCGCAACGAAGTCAGCATGCGAGGGTGGTTTGTACCAGGGTTATGCCCAATGCa  <  2:647429/140‑1 (MQ=255)

                                                                                                                                    gggCTTTGCGGTGCGGTAAATCGCTCCAGGCCACGTTCCTGTAGAGGATTGATGGCGATCATTTTCGCTCCCCGTTTCACTAAAGCGCGCAACGAAGTCAGCATGCGAGGGTGGTTTGTACCAGGGTTATGCCCAATGCa  <  2:315516/140‑1 (MQ=255)

GCGGCGCTTGCAGCATCATCGCGCTCAATTAACAGGCGCATCATCCCCTTGAGCAACGCCATATCGCCACCAATGCGCACGTTATAGTAGGCACTGGCCAACTGAGTCTCAGAGTTCGTCAGCATTTCAAACGGGTTTTGCGGTGCGGTAAATCGCTCCAGGCCACGTTCCTGTAGAGGATTGATGGCGATCATTTTCGCTCCCCGTTTCACTAAAGCGCGCAACGAAGTCAGCATGCGAGGGTGGTTTGTACCAGGGTTATGCCCAATGCA  >  NC_000913/1585576‑1585847

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

N/A