Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A11 F28 I1 R1 161 75.5 2581324 99.3% 2563254 138.8

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 1,675,478 T→C T295A (ACC→GCC)  pntB ← pyridine nucleotide transhydrogenase subunit beta

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,675,4780TC100.0% 315.7 / NA 85T295A (ACC→GCC) pntBpyridine nucleotide transhydrogenase subunit beta
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (39/46);  total (39/46)

TAATACCACGAGCGCGCAATTTCTCAGTAATTTCAGCGACAGGATATTGCGCCTGCGCGACTGCCATGCCGTACCCCGGAGTAATGATCACTGAATGGGAGTTTTTCAGCAGTTCCGCTGTCTCTTCTGCGGTGATTTCGCGGTGCTCACCCACTTCCTGATCATCGCCAGTAGAAGAGCCGTCGGTGCCGAAACCACCCGCAATAACGCTGATAAAGGAACGGTTCATCGCCTTACACATAATGTAAGAAAGGATAGCCCCCGAAGA  >  NC_000913/1675346‑1675613
                                                                                                                                    |                                                                                                                                       
tagtACCACGAGCGCGCAATTTCTCAGTAATTTCAGCGACAGGATATTGCGCCTGCGCGACTGCCATGCCGTACCCCGGAGTAATGATCACTGAATGGGAGTTTTTCAGCAGTTCCGCTGTCTCTTCTGCGGCGATTTcg                                                                                                                                  <  1:369786/137‑1 (MQ=255)
tagtACCACGAGCGCGCAATTTCTCAGTAATTTCAGCGACAGGATATTGCGCCTGCGCGACTGCCATGCCGTACCCCGGAGTAATGATCACTGAATGGGAGTTTTTCAGCAGTTCCGCTGTCTCTTCTGCGGCGATTTcg                                                                                                                                  <  1:26941/137‑1 (MQ=255)
   tACCACGAGCGCGCAATTTCTCAGTAATTTCAGCGACAGGATATTGCGCCTGCGCGACTGCCATGCCGTACCCCGGAGTAATGATCACTGAATGGGAGTTTTTCAGCAGTTCCGCTGTCTCTTCTGCGGCGATTTCGCgg                                                                                                                               <  2:839379/140‑1 (MQ=255)
   tACCACGAGCGCGCAATTTCTCAGTAATTTCAGCGACAGGATATTGCGCCTGCGCGACTGCCATGCCGTACCCCGGAGTAATGATCACTGAATGGGAGTTTTTCAGCAGTTCCGCTGTCTCTTCTGCGGCGATTTCGCgg                                                                                                                               <  1:702909/140‑1 (MQ=255)
    aCCACGAGCGCGCAATTTCTCAGTAATTTCAGCGACAGGATATTGCGCCTGCGCGACTGCCATGCCGTACCCCGGAGTAATGATCACTGAATGGGAGTTTTTCAGCAGTTCCGCTGTCTCTTCTGCGGCGATTTCGCGGt                                                                                                                              >  1:223011/1‑140 (MQ=255)
      cACGAGCGCGCAATTTCTCAGTAATTTCAGCGACAGGATATTGCGCCTGCGCGACTGCCATGCCGTACCCCGGAGTAATGATCACTGAATGGGAGTTTTTCAGCAGTTCCGCTGTCTCTTCTGCGGCGATTTCGCGGTGc                                                                                                                            >  2:835778/1‑140 (MQ=255)
      cACGAGCGCGCAATTTCTCAGTAATTTCAGCGACAGGATATTGCGCCTGCGCGACTGCCATGCCGTACCCCGGAGTAATGATCACTGAATGGGAGTTTTTCAGCAGTTCCGCTGTCTCTTCTGCGGCGATTTCGCGGTGc                                                                                                                            >  2:219013/1‑140 (MQ=255)
       gcGAGCGCGCAATTTCTCAGTAATTTCAGCGACAGGATATTGCGCTTGCGCGACTGCCATGCCGTACCCCGGAGTAATGATCACTGAATGGGAGTTTTTCAGCAGTTCCGCTGTCTCTTCTGCGGCGATTTCGCGGTGCt                                                                                                                           <  2:944314/139‑1 (MQ=255)
        cGAGCGCGCAATTTCTCAGTAATTTCAGCGACAGGATATTGCGCCTGCGCGACTGCCATGCCGTACCCCGGAGTAATGATCACTGAATGGGAGTTTTTCAGCAGTTCCGCTGTCTCTTCTGCGGCGATTTcg                                                                                                                                  <  2:553280/132‑1 (MQ=255)
        cGAGCGCGCAATTTCTCAGTAATTTCAGCGACAGGATATTGCGCCTGCGCGACTGCCATGCCGTACCCCGGAGTAATGATCACTGAATGGGAGTTTTTCAGCAGTTCCGCTGTCTCTTCTGCGGCGATTTcg                                                                                                                                  >  1:553280/1‑132 (MQ=255)
        cGAGCGCGCAATTTCTCAGTAATTTCAGCGACAGGATATTGCGCCTGCGCGACTGCCATGCCGTACCCCGGAGTAATGATCACTGAATGGGAGTTTTTCAGCAGTTCCGCTGTCTCTTCTGCGGCGATTTCGCGGTGCTc                                                                                                                          >  1:90765/1‑140 (MQ=255)
        cGAGCGCGCAATTTCTCAGTAATTTCAGCGACAGGATATTGCGCCTGCGCGACTGCCATGCCGTACCCCGGAGTAATGATCACTGAATGGGAGTTTTTCAGCAGTTCCGCTGTCTCTTCTGCGGCGATTTCGCGGTGCTc                                                                                                                          >  2:997680/1‑140 (MQ=255)
        cGAGCGCGCAATTTCTCAGTAATTTCAGCGACAGGATATTGCGCCTGCGCGACTGCCATGCCGTACCCCGGAGTAATGATCACTGAATGGGAGTTTTTCAGCAGTTCCGCTGTCTCTTCTGCGGCGATTTCGCGGTGCTc                                                                                                                          >  2:731172/1‑140 (MQ=255)
        cGAGCGCGCAATTTCTCAGTAATTTCAGCGACAGGATATTGCGCCTGCGCGACTGCCATGCCGTACCCCGGAGTAATGATCACTGAATGGGAGTTTTTCAGCAGTTCCGCTGTCTCTTCTGCGGCGATTTCGCGGTGCTc                                                                                                                          >  2:507396/1‑140 (MQ=255)
        cGAGCGCGCAATTTCTCAGTAATTTCAGCGACAGGATATTGCGCCTGCGCGACTGCCATGCCGTACCCCGGAGTAATGATCACTGAATGGGAGTTTTTCAGCAGTTCCGCTGTCTCTTCTGCGGCGATTTCGCGGTGCTc                                                                                                                          >  2:320278/1‑140 (MQ=255)
         gAGCGCGCAATTTCTCAGTAATTTCAGCGACAGGATATTGCGCCTGCGCGACTGCCATGCTGTACCCCGGAGTAATGATCACTGAATGGGAGTTTTTCAGCAGTTCCGCTGTCTCTTCTGCGGCGATTTCGCGGTGCTCa                                                                                                                         <  1:297091/140‑1 (MQ=255)
          aGCGCGCAATTTCTCAGTAATTTCAGCGACAGGATATTGCGCCTGCGCGACTGCCATGCCGTACCCCGGAGTAATGATCACTGAATGGGAGTTTTTCAGCAGTTCCGCTGTCTCTTCTGCGGCGATTTc                                                                                                                                   <  2:1193991/129‑1 (MQ=255)
          aGCGCGCAATTTCTCAGTAATTTCAGCGACAGGATATTGCGCCTGCGCGACTGCCATGCCGTACCCCGGAGTAATGATCACTGAATGGGAGTTTTTCAGCAGTTCCGCTGTCTCTTCTGCGGCGATTTc                                                                                                                                   >  1:1193991/1‑129 (MQ=255)
          aGCGCGCAATTTCTCAGTAATTTCAGCGACAGGATATTGCGCCTGCGCGACTGCCATGCCGTACCCCGGAGTAATGATCACTGAATGGGAGTTTTTCAGCAGTTCCGCTGTCTCTTCTGCGGCGATTTCGCGGTGCTCAc                                                                                                                        <  1:1036884/140‑1 (MQ=255)
          aGCGCGCAATTTCTCAGTAATTTCAGCGACAGGATATTGCGCCTGCGCGACTGCCATGCCGTACCCCGGAGTAATGATCACTGAATGGGAGTTTTTCAGCAGTTCCGCTGTCTCTTCTGCGGCGATTTCGCGGTGCTCAc                                                                                                                        >  1:79614/1‑140 (MQ=255)
          aGCGCGCAATTTCTCAGTAATTTCAGCGACAGGATATTGCGCCTGCGCGACTGCCATGCCGTACCCCGGAGTAATGATCACTGAATGGGAGTTTTTCAGCAGTTCCGCTGTCTCTTCTGCGGCGATTTCGCGGTGCTCAc                                                                                                                        >  2:875440/1‑140 (MQ=255)
          aGCGCGCAATTTCTCAGTAATTTCAGCGACAGGATATTGCGCCTGCGCGACTGCCATGCCGTACCCCGGAGTAATGATCACTGAATGGGAGTTTTTCAGCAGTTCCGCTGTCTCTTCTGCGGCGATTTCGCGGTGCTCAc                                                                                                                        >  1:1174909/1‑140 (MQ=255)
          aGCGCGCAATTTCTCAGTAATTTCAGCGACAGGATATTGCGCCCGCGCGACTGCCATGCCGTACCCCGGAGTAATGATCACTGAATGGGAGTTTTTCAGCAGTTCCGCTGTCTCTTCTGCGGCGATTTCGCGGTGCTCAc                                                                                                                        >  2:562755/1‑140 (MQ=255)
          aGCGCGCAATTTCTCAGTAATTTCAGCGACAGGATATCGCGCCTGCGCGACTGCCATGCCGTACCCCGGAGTAATGATCACTGAATGGGAGTTTTTCAGCAGTTCCGCTGTCTCTTCTGCGGCGATTTCGCGGTGCTCAc                                                                                                                        >  2:1245606/1‑140 (MQ=255)
           gcgcgcAATTTCTCAGTAATTTCAGCGACAGGATATTGCGCCTGCGCGACTGCCATGCCGTACCCCGGAGTAATGATCACTGAATGGGAGTTTTTCAGCAGTTCCGCTGTCTCTTCTGCGGCGATTTCGCGGTGCTCAcc                                                                                                                       <  2:1027495/140‑1 (MQ=255)
           gcgcgcAATTTCTCAGTAATTTCAGCGACAGGATATCGCGCCTGCGCGACTGCCATGCCGTACCCCGGAGTAATGATCACTGAATGGGAGTTTTTCAGCAGTTCCGCTGTCTCTTCTGCGGCGATTTCGCGGTGCTCAcc                                                                                                                       <  1:1245606/140‑1 (MQ=255)
            cgcgcAATTTCTCAGTAATTTCAGCGACAGGATATTGCGCCTGCGCGACTGCCATGCCGTACCCCGGAGTAATGATCACTGAATGGGAGTTTTTCAGCAGTTCCGCTGTCTCTTCTGCGGCGATTTCGCGGTGCTCAccc                                                                                                                      <  1:1036186/140‑1 (MQ=255)
            cgcgcAATTTCTCAGTAATTTCAGCGACAGGATATTGCGCCTGCGCGACTGCCATGCCGTACCCCGGAGTAATGATCACTGAATGGGAGTTTTTCAGCAGTTCCGCTGTCTCTTCTGCGGCGATTTCGCGGTGCTCAccc                                                                                                                      >  1:1236222/1‑140 (MQ=255)
            cgcgcAATTTCTCAGTAATTTCAGCGACAGGATATTGCGCCCGCGCGACTGCCATGCCGTACCCCGGAGTAATGATCACTGAATGGGAGTTTTTCAGCAGTTCCGCTGTCTCTTCTGCGGCGATTTCGCGGTGCTCAccc                                                                                                                      <  1:562755/140‑1 (MQ=255)
             gcgcAATTTCTCAGTAATTTCAGCGACAGGATATTGCGCCTGCGCGACTGCCATGCCGTACCCCGGAGTAATGATCACTGAATGGGAGTTTTTCAGCAGTTCCGCTGTCTCTTCTGCGGCGATTTCGCGGTGCTCACCCa                                                                                                                     >  2:758116/1‑140 (MQ=255)
              cgcAATTTCTCAGTAATTTCAGCGACAGGATATTGCGCCTGCGCGACTGCCATGCCGTACCCCGGAGTAATGATCACTGAATGGGAGTTTTTCAGCAGTTCCGCTGTCTCTTCTGCGGCGATTTCGCGGTGCTCAcc                                                                                                                       <  1:988911/137‑1 (MQ=255)
              cgcAATTTCTCAGTAATTTCAGCGACAGGATATTGCGCCTGCGCGACTGCCATGCCGTACCCCGGAGTAATGATCACTGAATGGGAGTTTTTCAGCAGTTCCGCTGTCTCTTCTGCGGCGATTTCGCGGTGCTCAcc                                                                                                                       >  2:988911/1‑137 (MQ=255)
                 aaTTTCTCAGTAATTTCAGCGACAGGATATTGCGCCTGCGCGACTGCCATGCCGTACCCCGGAGTAATGATCACTGAATGGGAGTTTTTCAGCAGTTCCGCTGTCTCTTCTGCGGCGATTTCGCGGTGCTCACCCACTTc                                                                                                                 <  2:90765/140‑1 (MQ=255)
                       tcAGTAATTTCAGCGACAGGATATTGCGCCTGCGCGACTGCCATGCCGTACCCCGGAGTAATGATCACTGAATGGGAGTTTTTCAGCAGTTCCGCTGTCTCTTCTGCGGCGATTTCGCGGTGCTCACCCACTTCCTGatc                                                                                                           <  1:1263088/140‑1 (MQ=255)
                        cAGTAATTTCAGCGACAGGATATTGCGCCTGCGCGACTGCCATGCCGTACCCCGGAGTAATGATCACTGAATGGGAGTTTTTCAGCAGTTCCGCTGTCTCTTCTGCGGCGATTTCGCGGTGCTCACCCACTTCCTGatca                                                                                                          <  1:875440/140‑1 (MQ=255)
                         aGTAATTTCAGCGACAGGATATTGCGCCTGCGCGACTGCCATGCCGTACCCCGGAGTAATGATCACTGAATGGGAGTTTTTCAGCAGTTCCGCTGTCTCTTCTGCGGCGATTTCGCGGTGCTCACCCACTTCCTGatcat                                                                                                         <  1:480910/140‑1 (MQ=255)
                         aGTAATTTCAGCGACAGGATATTGCGCCTGCGCGACTGCCATGCCGTACCCCGGAGTAATGATCACTGAATGGGAGTTTTTCAGCAGTTCCGCTGTCTCTTCTGCGGCGATTTCGCGGTGCTCACCCACTTCCTGatcat                                                                                                         <  1:32916/140‑1 (MQ=255)
                         aGTAATTTCAGCGACAGGATATTGCGCCTGCGCGACTGCCATGCCGTACCCCGGAGCAATGATCACTGAATGGGAGTTTTTCAGCAGTTCCGCTGTCTCTTCTGCGGCGATTTCGCGGAGCTCACCCACTTCCTGatcat                                                                                                         >  2:705019/1‑140 (MQ=255)
                            aaTTTCAGCGACAGGATATTGCGCCTGCGCGACTGCCATGCCGTACCCCGGAGTAATGATCACTGAATGGGAGTTTTTCAGCAGTTCCGCTGTCTCTTCTGCGGCGATTTCGCGGTGCTCACCCACTTCCTGATCATCGc                                                                                                      <  1:320278/140‑1 (MQ=255)
                             aTTTCAGCGACAGGATATTGCGCCTGCGCGACTGCCATGCCGTACCCCGGAGTAATGATCACTGAATGGGAGTTTTTCAGCAGTTCCGCTGTCTCTTCTGCGGCGATTTCGCGGTGCTCACCCACTTCCTGATCATCGcc                                                                                                     >  1:894337/1‑140 (MQ=255)
                               ttCAGCGACAGGATATTGCGCCTGCGCGACTGCCATGCCGTACCCCGGAGTAATGATCACTGAATGGGAGTTTTTCAGCAGTTCCGCTGTCTCTTCTGCGGCGATTTCGCGGTGCTCACCCACTTCCTGATCATCGCCAg                                                                                                   >  1:524444/1‑140 (MQ=255)
                                 cAGCGACAGGATATTGCGCCTGCGCGACTGCCATGCCGTACCCCGGAGTAATGATCACTGAATGGGAGTTTTTCAGCAGTTCCGCTGTCTCTTCTGCGGCGATTTCGCGGTGCTCACCCACTTCCTGATCATCGCCAGTa                                                                                                 <  1:758116/140‑1 (MQ=255)
                                             atTGCGCGTGCGCGACTGCCATGCCGTACCCCGGAGTAATGATCACTGAATGGGAGTTTTTCAGCAGTTCCGCTGTCTCTTCTGCGGCGATTTCGCGGTGCTCACCCACTTCCTGATCATCGCCAGTAGAAGAGCCGTCg                                                                                     <  1:507396/140‑1 (MQ=255)
                                             atTGCGCCTGCGCGACTGCCATGCCGTACCCCGGAGTAATGATCACTGAATGGGAGTTTTTCAGCAGTTCCGCTGTCTCTTCTGCGGCGATTTCGCGGTGCTCACCCACTTCCTGATCATCGCCAGTAGAAGAGCCGTCg                                                                                     <  1:731172/140‑1 (MQ=255)
                                               tGCGCCTGCGCGACTGCCATGCCGTACCCCGGAGTAATGATCACTGAATGGGAGTTTTTCAGCAGTTCCGCTGTCTCTTCTGCGGCGATTTCGCGGTGCTCACCCACTTCCTGATCATCGCCAGTAGAAGAGCCGTCGGt                                                                                   >  2:670968/1‑140 (MQ=255)
                                                 cgcCTGCGCGACTGCCATGCCGTACCCCGGAGTAATGATCACTGAATGGGAGTTTTTCAGCAGTTCCGCTGTCTCTTCTGCGGCGATTTCGCGGTGCTCACCCACTTCCTGATCATCGCCAGTAGAAGAGCCGTCGGTGc                                                                                 >  2:1174520/1‑140 (MQ=255)
                                                       cgcgACTGCCATGCCGTACCCCGGAGTAATGATCACTGAATGGGAGTTTTTCAGCAGTTCCGCTGTCTCTTCTGCGGCGATTTCGCGGTGCTCACCCACTTCCTGATCATCGCCAGTAGAAGAGCCGTCGGTGCCGAAac                                                                           <  1:186170/140‑1 (MQ=255)
                                                           aCTGCCATGCCGTACCCCGGAGTAATGATCACTGAATGGGAGTTTTTCAGCAGTTCCGCTGTCTCTTCTGCGGCGATTTCGCGGTGCTCACCCACTTCCTGATCATCGCCAGTAGAAGAGCCGTCGGTGCCGAAaccacc                                                                       >  2:380579/1‑140 (MQ=255)
                                                                  tGCCGTACCCCGGAGTAATGATCACTGAATGGGAGTTTTTCAGCAGTTCCGCTGTCTCTTCTGCGGCGATTTCGCGGTGCTCACCCACTTCCTGATCATCGCCAGTAGAAGAGCCGTCGGTGCCGAAACCACCCGCAATa                                                                >  1:1288481/1‑140 (MQ=255)
                                                                   gCCGTACCCCGGAGTAATGATCACTGAATGGGAGTTTTTCAGCAGTTCCGCTGTCTCTTCTGCGGCGATTTCGCGGTGCTCACCCACTTCCTGATCATCGCCAGTAGAAGAGCCGTCGGTGCCGAAACCACCCGCAATaa                                                               <  2:894337/140‑1 (MQ=255)
                                                                         ccccGGAGTAATGATCACTGAATGGGAGTTTTTCAGCAGTTCCGCTGTCTCTTCTGCGGCGATTTCGCGGTGCTCACCCACTTCCTGATCATCGCCAGTAGAAGAGCCGTCGGTGCCGAAACCACCCGCAATAACGCTGa                                                         >  2:727450/1‑140 (MQ=255)
                                                                          cccGGAGTAATGATCACTGAATGGGAGTTTTTCAGCAGTTCCGCTGTCTCTTCTGCGGCGATTTCGCGGTGCTCACCCACTTCCTGATCATCGCCAGTAGAAGAGCCGTCGGTGCCGAAACCACCCGCAATAACGCTGAt                                                        <  2:79614/140‑1 (MQ=255)
                                                                          cccGGAGTAATGATCACTGAATGGGAGTTTTTCAGCAGTTCCGCTGTCTCTTCTGCGGCGATTTCGCGGTGCTCACCCACTTCCTGATCATCGCCAGTAGAAGAGCCGTCGGTGCCGAAACCACCCGCAATAACGCTGAt                                                        <  2:1174909/140‑1 (MQ=255)
                                                                           ccGGAGTAATGATCACTGAATGGGAGTTTTTCAGCAGTTCCGCTGTCTCTTCTGCGGCGATTTCGCGGTGCTCACCCACTTCCTGATCATCGCCAGTAGAAGAGCCGTCGGTGCCGAAACCACCCGCAATAACGCTGATa                                                       <  1:374577/140‑1 (MQ=255)
                                                                            cGGAGTAATGATCACTGAATGGGAGTTTTTCAGCAGTTCCGCTGTCTCTTCTGCGGCGATTTCGCGGTGCTCACCCACTTCCTGATCATCGCCAGTAGAAGAGCCGTCGGTGCCGAAACCACCCGCAATAACGCTGATaa                                                      >  2:111138/1‑140 (MQ=255)
                                                                                 tAATGATCACTGAATGGGAGTTTTTCAGCAGTTCCGCTGTCTCTTCTGCGGCGATTTCGCGGTGCTCACCCACTTCCTGATCATCGCCAGTAGAAGAGCCGTCGGTGCCGAAACCACCCGCAATAACGCTGATAAAGGaa                                                 <  1:727450/140‑1 (MQ=255)
                                                                                 tAATGATCACTGAATGGGAGTTTTTCAGCAGTTCCGCTGTCTCTTCTGCGGCGATTTCGCGGTGCTCACCCACTTCCTGATCATCGCCAGTAGAAGAGCCGTCGGTGCCGAAACCACCCGCAATAACGCTGATAAAGGaa                                                 >  2:710822/1‑140 (MQ=255)
                                                                                        cACTGAATGGGAGTTTTTCAGCAGTTCCGCTGTCTCTTCTGCGGCGATTTCGCGGTGCTCTCCCACTTCCTGATCATCGCCAGTAGAAGAGCCGTCGGTGCCGAAACCACCCGCAATAACGCTGATAAAGGAACGGTTCa                                          <  1:710822/140‑1 (MQ=255)
                                                                                        cACTGAATGGGAGTTTTTCAGCAGTTCCGCTGTCTCTTCTGCGGCGATTTCGCGGTGCTCACCCACTTCCTGATCATCGCCAGTAGAAGAGCCGTCGGTGCCGAAACCACCCGCAATAACGCTGATAAAGGAACGGTTCa                                          >  1:1094474/1‑140 (MQ=255)
                                                                                        cACTGAATGGGAGTTTTTCAGCAGTTCCGCTGTCTCTTCTGCGGCGATTTCGCGGTGCTCACCCACTTCCTGATCATCGCCAGTAGAAGAGCCGTCGGTGCCGAAACCACCCGCAATAACGCTGATAAAGGAACGGTTCa                                          >  2:364799/1‑140 (MQ=255)
                                                                                        cACTGAATGGGAGTTTTTCAGCAGTTCCGCTGTCTCTTCTGCGGCGATTTCGCGGTGCTCACCCACTTCCTGATCATCGCCAGTAGAAGAGCCGTCGGTGCCGAAACCACCCGCAATAACGCTGATAAAGGAACGGTTCa                                          <  1:670968/140‑1 (MQ=255)
                                                                                         aCTGAATGGGAGTTTTTCAGCAGTTCCGCTGTCTCTTCTGCGGCGATTTCGCGGTGCTCACCCACTTCCTGATCATCGCCAGTAGAAGAGCCGTCGGTGCCGAAACCACCCGCAATAACGCTGATAAAGGAACGGTTCAt                                         >  2:902928/1‑140 (MQ=255)
                                                                                         aCTGAATGGGAGTTTTTCAGCAGTTCCGCTGTCTCTTCTGCGGCGATTTCGCGGTGCTCACCCACTTCCTGATCATCGCCAGTAGAAGAGCCGTCGGTGCCGAAACCACCCGCAATAACGCTGATAAAGGAACGGTTCAt                                         >  2:1096317/1‑140 (MQ=255)
                                                                                         aCTGAATGGGAGTTTTTCAGCAGTTCCGCTGTCTCTTCTGCGGCGATTTCGCGGTGCTCACCCACTTCCTGATCATCGCCAGTAGAAGAGCCGTCGGTGCCGAAACCACCCGCAATAACGCTGATAAAGGAACGGTTCAt                                         >  1:1269759/1‑140 (MQ=255)
                                                                                         aCTGAATGGGAGTTTTTCAGCAGTTCCGCTGTCTCTTCTGCGGCGATTTCGCGGTGCTCACCCACTTCCTGATCATCGCCAGTAGAAGAGCCGTCGGTGCCGAAACCACCCGCAATAACGCTGATAAAGGAACGGTTCAt                                         <  2:223011/140‑1 (MQ=255)
                                                                                           tGAATGGGAGTTTTTCAGCAGTTCCGCTGTCTCTTCTGCGGCGATTTCGCGGTGCTCACCCACTTCCTGATCATCGCCAGTAGAAGAGCCGTCGGTGCCGAAACCACCCGCAATAACGCTGATAAAGGAACGGTTCATCg                                       >  1:389422/1‑140 (MQ=255)
                                                                                              aTGGGAGTTTTTCAGCAGTTCCGCTGTCTCTTCTGCGGCGATTTCGCGGTGCTCACCCACTTCCTGATCATCGCCAGTAGAAGAGCCGTCGGTGCCGAAACCACCCGCAATAACGCTGATAAAGGAACGGTTCATCGCCt                                    <  1:1023441/140‑1 (MQ=255)
                                                                                               tGGGAGTTTTTCAGCAGTTCCGCTGTCTCTTCTGCGGCGATTTCGCGGTGCTCACCCACTTCCTGATCATCGCCAGTAGAAGAGCCGTCGGTGCCGAAACCACCCGCAATAACGCTGATAAAGGAACGGTTCATCGCCtt                                   <  1:997680/140‑1 (MQ=255)
                                                                                               tGGGAGTTTTTCAGCAGTTCCGCTGTCTCTTCTGCGGCGATTTCGCGGTGCTCACCCACTTCCTGATCATCGCCAGTAGAAGAGCCGTCGGTGCCGAAACCACCCGCAATAACGCTGATAAAGGAACGGTTCATCGCCtt                                   >  2:481701/1‑140 (MQ=255)
                                                                                                gggAGTTTTTCAGCAGTTCCGCTGTCTCTTCTGCGGCGATTTCGCGGTGCTCACCCACTTCCTGATCATCGCCAGTAGAAGAGCCGTCGGTGCCGAAACCACCCGCAATAACGCTGATAAAGGAACGGTTCATCGCCTTa                                  <  1:111138/140‑1 (MQ=255)
                                                                                                gggAGTTTTTCAGCAGTTCCGCTGTCTCTTCTGCGGCGATTTCGCGGTGCTCACCCACTTCCTGATCATCGCCAGTAGAAGAGCCGTCGGTGCCGAAACCACCCGCAATAACGCTGATAAAGGAACGGTTCATCGCCTTa                                  >  2:631444/1‑140 (MQ=255)
                                                                                                  gAGTTTTTCAGCAGTTCCGCTGTCTCTTCTGCGGCGATTTCGCGGTGCTCACCCACTTCCTGATCATCGCCAGTAGAAGAGCCGTCGGTGCCGAAACCACCCGCAATAACGCTGATAAAGGAACGGTTCATCGCCTTaca                                <  1:766509/140‑1 (MQ=255)
                                                                                                  gAGTTTTTCAGCAGTTCCGCTGTCTCTTCTGCGGCGATTTCGCGGTGCTCACCCACTTCCTGATCATCGCCAGTAGAAGAGCCGTCGGTGCCGAAACCACCCGCAATAACGCTGATAAAGGAACGGTTCATCGCCTTaca                                <  2:389422/140‑1 (MQ=255)
                                                                                                  gAGTTTTTCAGCAGTTCCGCTGTCTCTTCTGCGGCGATTTCGCGGTGCTCACCCACTTCCTGATCATCGCCAGTAGAAGAGCCGTCGGTGCCGAAACCACCCGCAATAACGCTGATAAAGGAACGGTTCATCGCCTTaca                                >  2:281222/1‑140 (MQ=255)
                                                                                                    gTTTTTCAGCAGTTCCGCTGTCTCTTCTGCGGCGATTTCGCGGTGCTCACCCACTTCCTGATCATCGCCAGTAGAAGAGCCGTCGGTGCCGAAACCACCCGCAATAACGCTGATAAAGGAACGGTTCATCGCCTTAcaca                              <  1:835778/140‑1 (MQ=255)
                                                                                                    gTTTTTCAGCAGTTCCGCTGTCTCTTCTGCGGCGATTTCGCGGTGCTCACCCACTTCCTGATCATCGCCAGTAGAAGAGCCGTCGGTGCCGAAACCACCCGCAATAACGCTGATAAAGGAACGGTTCATCGCCTTAcaca                              <  1:510947/140‑1 (MQ=255)
                                                                                                    gTTTTTCAGCAGTTCCGCTGTCTCTTCTGCGGCGATTTCGCGGTGCTCACCCACTTCCTGATCATCGCCAGTAGAAGAGCCGTCGGTGCCGAAACCACCCGCAATAACGCTGATAAAGGAACGGTTCATCGCCTTAcaca                              <  2:311336/140‑1 (MQ=255)
                                                                                                    gTTTTTCAGCAGTTCCGCTGTCTCTTCTGCGGCGATTTCGCGGTGCTCACCCACTTCCTGATCATCGCCAGTAGAAGAGCCGTCGGTGCCGAAACCACCCGCAATAACGCTGATAAAGGAACGGTTCATCGCCTTAcaca                              <  1:281222/140‑1 (MQ=255)
                                                                                                     tttttCAGCAGTTCCGCTGTCTCTTCTGCGGCGATTTCGCGGTGCTCACCCACTTCCTGATCATCGCCAGTAGAAGAGCCGTCGGTGCCGAAACCACCCGCAATAACGCTGATAAAGGAACGGTTCATCGCCTTAcaca                              >  2:287989/1‑139 (MQ=255)
                                                                                                     tttttCAGCAGTTCCGCTGTCTCTTCTGCGGCGATTTCGCGGTGCTCACCCACTTCCTGATCATCGCCAGTAGAAGAGCCGTCGGTGCCGAAACCACCCGCAATAACGCTGATAAAGGAACGGTTCATCGCCTTAcaca                              <  1:287989/139‑1 (MQ=255)
                                                                                                       tttCAGCAGTTCCGCTGTCTCTTCTGCGGCGATTTCGCGGTGCTCACCCACTTCCTGATCATCGCCAGTAGAAGAGCCGTCGGTGCCGAAACCACCCGCAATAACGCTGATAAAGGAACGGTTCATCGCCTTACACATaa                           >  2:342300/1‑140 (MQ=255)
                                                                                                                  ccGCTGTCTCTTCTGCGGCGATTTCGCGGTGCTCACCCACTTCCTGATCATCGCCAGTAGAAGAGCCGTCGGTGCCGAAACCACCCGCAATAACGCTGATAAAGGAACGGTTCATCGCCTTACACATAATGTAAGAAAgg                <  1:481701/140‑1 (MQ=255)
                                                                                                                    gCTGTCTCTTCTGCGGCGATTTCGCGGTGCTCACCCACTTCCTGATCATCGCCAGTAGAAGAGCCGTCGGTGCCGAAACCACCCGCAATAACGCTGATAAAGGAACGGTTCATCGCCTTACACATAATGTAAGAAAGGAt              <  1:219013/140‑1 (MQ=255)
                                                                                                                     cTGTCTCTTCTGCGGCGATTTCGCGGTGCTCACCCACTTCCTGATCATCGCCAGTAGAAGAGCCGTCGGTGCCGAAACCACCCGCAATAACGCTGATAAAGGAACGGTTCATCGCCTTACACATAATg                         >  2:284752/1‑128 (MQ=255)
                                                                                                                     cTGTCTCTTCTGCGGCGATTTCGCGGTGCTCACCCACTTCCTGATCATCGCCAGTAGAAGAGCCGTCGGTGCCGAAACCACCCGCAATAACGCTGATAAAGGAACGGTTCATCGCCTTACACATAATg                         <  1:284752/128‑1 (MQ=255)
                                                                                                                        tctcTTCTGCGGCGATTTCGCGGTGCTCACCCACTTCCCGATCATCGCCAGTAGAAGAGCCGTCGGTGCCGAATCCACCCGCAATAACGCTGATAAAGGAACGGTTCATCGCCTTACACATAATGTAAGAAAGGATAGcc          >  2:797132/1‑140 (MQ=255)
                                                                                                                            ttctGCGGCGATTTCGCGGTGCTCACCCACTTCCTGATCATCGCCAGTAGAAGAGCCGTCGGTGCCGAAACCACCCGCAATAACGCTGATAAAGGAACGGTTCATCGCCTTACACATAATGTAAGAAAGGATAGCCCCCg      <  1:902928/140‑1 (MQ=255)
                                                                                                                                gcggcgATTTCGCGGTGCTCACCCACTTCCTGATCATCGCCAGTAGAAGAGCCGTCGGTGCCGAAACCACCCGCAATAACGCTGATAAAGGAACGGTTCATCGCCTTACACATAATGTAAGAAAGGATAGCCCCCgaaga  >  2:993718/1‑140 (MQ=255)
                                                                                                                                    |                                                                                                                                       
TAATACCACGAGCGCGCAATTTCTCAGTAATTTCAGCGACAGGATATTGCGCCTGCGCGACTGCCATGCCGTACCCCGGAGTAATGATCACTGAATGGGAGTTTTTCAGCAGTTCCGCTGTCTCTTCTGCGGTGATTTCGCGGTGCTCACCCACTTCCTGATCATCGCCAGTAGAAGAGCCGTCGGTGCCGAAACCACCCGCAATAACGCTGATAAAGGAACGGTTCATCGCCTTACACATAATGTAAGAAAGGATAGCCCCCGAAGA  >  NC_000913/1675346‑1675613

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A