Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A11 F28 I1 R1	161	75.5	2581324	99.3%	2563254	138.8

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,684,763	A→G	Y249H (TAC→CAC)	glyA ←	serine hydroxymethyltransferase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,684,763	0	A	G	100.0%	214.3 / NA	61	Y249H (TAC→CAC)	glyA	serine hydroxymethyltransferase
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (30/31); total (30/31)

TTTTTAGCGACCTGCTGCTGGTAAGTTTTGAACTCAGGCTCCATCGCTTCTTTCAGAGCAACCGCTTTACCGGCGATTACGTGCATCAACGGACCGCCCTGACCACCAGGGAAAACGGCAGAGTTCAGTTTTTTGTACAGCTCTTCGCTACCACCTTTCGCCAGGATCAGGCCGCCGCGCGGACCCGCCAGGGTTTTGTGAGTGGTGGTAGTAACAACGTGAGCATGAGGAACCGGGTTCGGGTAGACGCCAGCAGCAACCAGGCCCGC  >  NC_000913/2684627‑2684895

tttttAGCGACCTGCTGCTGGTAAGTTTTGAACTCAGGCTCCATCGCTTCTTTCAGAGCAACCGCTTTACCGGCGATTACGTGCATCAACGGACCGCCCTGACCACCAGGGAAAACGGCAGAGTTCAGTTTTTTGTGCAg                                                                                                                                   <  2:1123771/140‑1 (MQ=255)

  tttAGCGACCTGCTGCTGGTAAGTTTTGAACTCAGGCTCCATCGCTTCTTTCAGAGCAACCGCTTTACCGGCGATTACGTGCATCAACGGACCGCCCTGACCACCAGGGAAAACGGCAGAGTTCAGTTTTTTGTGCAGct                                                                                                                                 >  1:505310/1‑140 (MQ=255)

   ttAGCGACCTGCTGCTGGTAAGTTTTGAACTCAGGCTCCATCGCTTCTTTCAGAGCAACCGCTTTACCGGCGATTACGTGCATCAACGGACCGCCCTGACCACCAGGGAAAACGGCAGAGTTCAGTTTTTTGTGCAGctc                                                                                                                                <  2:154865/140‑1 (MQ=255)

       cGACCTGCTGCTGGTAAGTTTTGAACTCAGGCTCCATCGCTTCTTTCAGAGCAACCGCTTTACCGGCGATTACGTGCATCAACGGACCGCCCTGACCACCAGGGAAAACGGCAGAGTTCAGTTTTTTGTGCAGCTCTTCg                                                                                                                            <  1:1202802/140‑1 (MQ=255)

           ctgctgctgGTAAGTTTTGAACTCAGGCTCCATCGCTTCTTTCAGAGCAACCGCTTTACCGGCGATTACGTGCATCAACGGACCGCCCTGACCACCAGGGAAAACGGCAGAGTTCAGTTTTTTGTGCAGCTCTTCGCTac                                                                                                                        <  1:889458/140‑1 (MQ=255)

              ctgctgGTAAGTTTTGAACTCAGGCTCCATCGCTTCTTTCAGAGCAACCGCTTTACCGGCGATTACGTGCATCAACGGACCGCCCTGACCACCAGGGAAAACGGCAGAGTTCAGTTTTTTGTGCAGCTCTTCGCTaccac                                                                                                                     >  1:1034027/1‑140 (MQ=255)

                gctgGTAAGTTTTGAACTCAGGCTCCATCGCTTCTTTCAGAGCAACCGCTTTACCGGCGATTACGTGCATCAACGGACCGCCCTGACCACCAGGGAAAACGGCAGAGTTCAGTTTTTTGTGCAGCTCTTCGCTACCACCt                                                                                                                   <  1:965787/140‑1 (MQ=255)

                    gTAAGTTTTGAACTCAGGCTCCATCGCTTCTTTCAGAGCAACCGCTTTACCGGCGATTACGTGCATCAACGGACCGCCCTGACCACCAGGGAAAACGGCAGAGTTCAGTTTTTTGTGCAGCTCTTCGCTac                                                                                                                        >  2:504529/1‑131 (MQ=255)

                    gTAAGTTTTGAACTCAGGCTCCATCGCTTCTTTCAGAGCAACCGCTTTACCGGCGATTACGTGCATCAACGGACCGCCCTGACCACCAGGGAAAACGGCAGAGTTCAGTTTTTTGTGCAGCTCTTCGCTac                                                                                                                        <  1:504529/131‑1 (MQ=255)

                     tAAGTTTTGAACTCAGGCTCCATCGCTTCTTTCAGAGCAACCGCTTTACCGGCGATTACGTGCATCAACGGACCGCCCTGACCACCAGGGAAAACGGCAGAGTTCAGTTTTTTGTGCAGCTCTTCGCTACCACCTTTCGc                                                                                                              <  1:327335/140‑1 (MQ=255)

                     tAAGTTTTGAACTCAGGCTCCATCGCTTCTTTCAGAGCAACCGCTTTACCGGCGATTACGTGCATCAACGGACCGCCCTGACCACCAGGGAAAACGGCAGAGTTCAGTTTTTTGTGCAGCTCTTCGCTACCACCTTTCGc                                                                                                              >  1:284692/1‑140 (MQ=255)

                                   aGGCTCCATCGCTTCTTTCAGAGCAACCGCTTTACCGGCGATTACGTGCATCAACGGACCGCCCTGACCACCAGGGAAAACGGCAGAGTTCAGTTTTTTGTGCAGCTCTTCGCTACCACCTTTCGCCAGGATCAGgccgc                                                                                                >  1:1262000/1‑140 (MQ=255)

                                       cccATCCTTTTTTTCAGAGCAACCGCTTTCCCGGCGTTTCCGTGCATCACCGGCCCCCCCTGCCCCCCGGGAAAAACGGAAGATTTCTTTTTTTTGTGCAGCTCTTCCCTCCCCCCTTCCGCCAGAACCGGCCCGCcgcg                                                                                            <  2:9232/139‑1 (MQ=255)

                                           tCGCTTCTTTCAGAGCAACCGCTTTACCGGCGATTACGTGCATCAACGGACCGCCCTGACCACCAGGGAAAACGGCAGAGTTCAGTTTTTTGTGCAGCTCTTCGCTACCACCTTTCGCCAGGATCAGGCCGCCGCGCGGa                                                                                        >  1:764821/1‑140 (MQ=255)

                                           tCGCTTCTTTCAGAGCAACCGCTTTACCGGCGATTACGTGCATCAACGGACCGCCCTGACCACCAGGGAAAACGGCAGAGTTCAGTTTTTTGTGCAGCTCTTCGCTACCACCTTTCGCCAGGATCAGGCCGCCGCGCGGa                                                                                        <  1:1246373/140‑1 (MQ=255)

                                               ttcttTCAGAGCAACCGCTTTACCGGCGATTACGTGCATCAACGGACCGCCCTGACCACCAGGGAAAACGGCAGAGTTCAGTTTTTTGTGCAGCTCTTCGCTACCACCTTTCGCCAGGATCAGGCCGCCGCGCGGACCCg                                                                                    >  2:854620/1‑140 (MQ=255)

                                               ttcttTCAGAGCAACCGCTTTACCGGCGATTACGTGCATCAACGGACCGCCCTGACCACCAGGGAAAACGGCAGAGTTCAGTTTTTTGTGCAGCTCTTCGCTACCACCTTTCGCCAGGATCAGGCCGCCGCGCGGACCCg                                                                                    >  1:155247/1‑140 (MQ=255)

                                               ttcttTCAGAGCAACCGCTTTACCGGCGATTACGTGCATCAACGGACCGCCCTGACCACCAGGGAAAACGGCAGAATTCAGTTTTTTGTGCAGCTCTTCGCTACCACCTTTCGCCAGGATCAGGCCGCCGCGCGGACCCg                                                                                    >  2:210309/1‑140 (MQ=255)

                                                 cttTCAGAGCAACCGCTTTACCGGCGATTACGTGCATCAACGGACCGCCCTGACCACCAGGGAAAACGGCAGAGTTCAGTTTTTTGTGCAGCTCTTCGCTACCCCCTTTCGCCAGGATCAGGCCGCCGCGCGGACCCGcc                                                                                  <  1:673233/140‑1 (MQ=255)

                                                 cttTCAGAGCAACCGCTTTACCGGCGATTACGTGCATCAACGGACCGCCCTGACCACCAGGGAAAACGGCAGAGTTCAGTTTTTTGTGCAGCTCTTCGCTACCACCTTTCGCCAGGATCAGGCCGCCGCGCGGACCCGcc                                                                                  >  2:660487/1‑140 (MQ=255)

                                                 cttTCAGAGCAACCGCTTTACCGGCGATTACGTGCATCAACGGACCGCCCTGACCACCAGGGAAAACGGCAGAGTTCAGTTTTTTGTGCAGCTCTTCGCTACCACCTTTCGCCAGGATCAGGCCGCCGCGCGGACCCGcc                                                                                  <  2:440062/140‑1 (MQ=255)

                                                   ttCAGAGCAACCGCTTTACCGGCGATTACGTGCATCAACGGACCGCCCTGACCACCAGGGAAAACGGCAGAGTTCAGTTTTTTGTGCAGCTCTTCGCTACCACCTTTCGCCAGGATCAGGCCGCCGCGCGGACCCGcc                                                                                  <  2:809583/138‑1 (MQ=255)

                                                   ttCAGAGCAACCGCTTTACCGGCGATTACGTGCATCAACGGACCGCCCTGACCACCAGGGAAAACGGCAGAGTTCAGTTTTTTGTGCAGCTCTTCGCTACCACCTTTCGCCAGGATCAGGCCGCCGCGCGGACCCGcc                                                                                  >  1:809583/1‑138 (MQ=255)

                                                   ttCAGAGCAACCGCTTTACCGGCGATTACGTGCATCAACGGACCGCCCTGACCACCAGGGAAAACGGCAGAGTTCAGTTTTTTGTGCAGCTCTTCGCTACCACCTTTCGCCAGGATCAGGCCGCCGCGCGGACCCGcc                                                                                  <  2:1217959/138‑1 (MQ=255)

                                                   ttCAGAGCAACCGCTTTACCGGCGATTACGTGCATCAACGGACCGCCCTGACCACCAGGGAAAACGGCAGAGTTCAGTTTTTTGTGCAGCTCTTCGCTACCACCTTTCGCCAGGATCAGGCCGCCGCGCGGACCCGcc                                                                                  >  1:1217959/1‑138 (MQ=255)

                                                   ttCAGAGCAACCGCTTTACCGGCGATTACGTGCATCAACGGACCGCCCTGACCACCAGGGAAAACGGCAGAGTTCAGTTTTTTGTGCAGCTCTTCGCTACCACCTTTCGCCAGGATCAGGCCGCCGCGCGGACCCGCCAg                                                                                >  1:592517/1‑140 (MQ=255)

                                                        agCAACCGCTTTACCGGCGATTACGTGCATCAACGGACCGCCCTGACCACCAGGGAAAACGGCAGAGTTCAGTTTTTTGTGCAGCTCTTCGCTACCACCTTTCGCCAGGATCAGGCCGCCGCGCGGACCCGCCAGGGttt                                                                           >  1:245222/1‑140 (MQ=255)

                                                            aCCGCTTTACCGGCGATTACGTGCATCAACGGACCGCCCTGACCACCAGGGAAAACGGCAGAGTTCAGTTTTTTGTGCAGCTCTTCGCTACCACCTTTCGCCAGGATCAGGCCGCCGCGCGGACCCGCCAGGGTTTtgtg                                                                       <  2:592517/140‑1 (MQ=255)

                                                             ccGCTTTACCGGCGATTACGTGCATCAACGGACCGCCCTGACCACCAGGGAAAACGGCAGAGTTCAGTTTTTTGTGCAGCTCTTCGCTACCACCTTTCGCCAGGATCAGGCCGCCGCGCGGACCCGCCAGGGTTTTGTGa                                                                      >  2:1287752/1‑140 (MQ=255)

                                                             ccGCTTTACCGGCGATTACGTGCATCAACGGACCGCCCTGACCACCAGGGAAAACGGCAGAGTTCAGTTTTTTGTGCAGCTCTTCGCTACCACCTTTCGCCAGGATCAGGCCGCCGCGCGGACCCGCCAGGGTTTTGTGa                                                                      <  2:406605/140‑1 (MQ=255)

                                                              cGCTTTACCGGCGATTACGTGCATCAACGGACCGCCCTGACCACCAGGGAAAACGGCAGAGTTCAGTTTTTTGTGCAGCTCTTCGCTACCACCTTTCGCCAGGATCAGGCCGCCGCGCGGACCCGCCAGGGTTTTGagag                                                                     <  1:301445/140‑1 (MQ=255)

                                                              cGCTTTACCGGCGATTACGTGCATCAACGGACCGCCCTGACCACCAGGGAAAACGGCAGAGTTCAGTTTTTTGTGCAGCTCTTCGCTACCACCTTTCGCCAGGATCAGGCCGCCGCGCGGACCCGCCAGGGTTTTGTGAg                                                                     <  1:813868/140‑1 (MQ=255)

                                                              cGCTTTACCGGCGATTACGTGCATCAACGGACCGCCCTGACCACAAGGGAAAACGGCAGAGTTCAGTTTTTTGTGCAGCTCTTCGCTCCCCCCTTCCGCCAGGATCAGGCCGCCGCGCGGACCCGCCAGGGTTTTGTGAg                                                                     <  1:180920/140‑1 (MQ=255)

                                                                cTTTACCGGCGATTACGTGCATCAACGGACCGCCCTGACCACCAGGGAAAACGGCAGAGTTCAGTTTTTTGTGCAGCTCTTCGCTACCCCCTTTCGCCAGGATCAGGCCGCCGCGCGGACCCGCCAGGGTTTTGTGAgtg                                                                   <  1:854620/140‑1 (MQ=255)

                                                                cTTTACCGGCGATTACGTGCATCAACGGACCGCCCTGACCACCAGGGAAAACGGCAGAGTTCAGTTTTTTGTGCAGCTCTTCGCTACCACCTTTCGCCAGGATCAGGCCGCCGCGCGGACCCGCCAGGGTTTTGTGAgtg                                                                   <  2:155247/140‑1 (MQ=255)

                                                                cTTTACCGGCGATTACGTGCATCAACGGACCGCCCTGACCACCAGGGAAAACGGCAGAGTTCAGTTTTTTGTGCAGCTCTTCGCTACCACCTTTCGCCAGGATCAGGCCGCCGCGCGGACCCGCCAGGGTTTTGTGAgtg                                                                   <  1:1006109/140‑1 (MQ=255)

                                                                cTTTACCGGCGATTACGTGCATCAACGGACCGCCCTGACCACCAGGGAAAACGGCAGAGTTCAGTTTTTTGTGCAGCTCTTCGCTACCACCTTTCGCCAGGATCAGGCCGCCGCGCGGACCCGCCAGGGTTTTGTGAgtg                                                                   <  1:738056/140‑1 (MQ=255)

                                                                  ttACCGGCGATTACGTGCATCAACGGACCGCCCTGACCACCAGGGAAAACGGCAGAGTTCAGTTTTTTGTGCAGCTCTTCGCTACTACCTTTCGCCAGGATCAGGCCGCCGCGCGGACCCGCCAGGGTTTtgtg                                                                       <  2:39051/134‑1 (MQ=255)

                                                                  ttACCGGCGATTACGTGCATCAACGGACCGCCCTGACCACCAGGGAAAACGGCAGAGTTCAGTTTTTTGTGCAGCTCTTCGCTACCACCTTTCGCCAGGATCAGGCCGCCGCGCGGACCCGCCAGGGt                                                                             >  1:1248842/1‑128 (MQ=255)

                                                                  ttACCGGCGATTACGTGCATCAACGGACCGCCCTGACCACCAGGGAAAACGGCAGAGTTCAGTTTTTTGTGCAGCTCTTCGCTACCACCTTTCGCCAGGATCAGGCCGCCGCGCGGACCCGCCAGGGt                                                                             <  2:1248842/128‑1 (MQ=255)

                                                                  ttACCGGCGATTACGTGCATCAACGGACCGCCCTGACCACCAGGGAAAACGGCAGAGTTCAGTTTTTTGTGCAGCTCTTCGCTACCACCTTTCGCCAGGATCAGGCCGCCGCGCGGACCCGCCAGGGTTTtgtg                                                                       >  1:39051/1‑134 (MQ=255)

                                                                    aCCGGCGATTACGTGCATCAACGGACCGCCCTGACCCCCAGGGAAAACGGCAGAGTTCAGTTTTTTGTGCAGCTCTTCGCTACCACCTTTCGCCAGGATCAGGCCGCCGCGCGGACCCGCCAGGGTTTTGTGAGtggtgg                                                               <  2:539833/140‑1 (MQ=255)

                                                                          gATTACGTGCATCAACGGACCGCCCTGACCACAAGGAAAAACGGCGGAGTTCAGTTTTTTGTGCAGCTCTTCGCTACCGCTTTCCGCCAGAATCAGGCCGCCGCGGGGACCCGCCAGGGTTTTGTGAGTGGTGGTAGTaa                                                         <  2:1034027/140‑1 (MQ=255)

                                                                           aTTACGTGCATCAACGGACCGCCCTGACCACCAGGGAAAACGGCAGAGTTCAGTTTTTTGTGCAGCTCTTCGCTACCACCTTTCGCCAGGATCAGGCCGCCGCGCGGACCCGCCAGGGTTTTGTGAGTGGTGGTAGTaac                                                        >  2:1181687/1‑140 (MQ=255)

                                                                             tACGTGCATCAACGGACCGCCCTGACCACCAGGGAAAACGGCAGAGTTCAGTTTTTTGTGCAGCTCTTCGCTACCACCTTTCGCCAGGATCAGGCCGCCGCGCGGACCCGCCAGGGTTTTGTGAGTGGTGGTAGTaacaa                                                      >  2:1249679/1‑140 (MQ=255)

                                                                              aCGTGCATCAACGGACCGCCCTGACCACCAGGGAAAACGGCAGAGTTCAGTTTTTTGTGCAGCTCTTCGCTACCCCCTTTCGCCAGGATCAGGCCGCCGCGCGGACCCGCCAGGGTTTTGTGAGTGGTGGTAGTaacaac                                                     <  2:505310/140‑1 (MQ=255)

                                                                               cGTCCATCAAGGGCCCGCCCTGACCACCAGGGAAAACGGCAGAGTTCAGTTTTTTGTGCAGCTCTCCGCTACCCCCTTTCGCCAGGACCAGGCCGCCGCGCGGACCCGCCAGGGTTTTGTGAGTGGTGGTAGTAACAACg                                                    <  2:626459/140‑1 (MQ=255)

                                                                                gTGCATCAACGGACCGCCCTGACCACCAGGGAAAACGGCAGAGTTCAGTTTTTTGTGCAGCTCTTCGCTACCACCTTTCGCCAGGATCAGGCCGCCGCGCGGACCCGCCAGGGTTTTGTGAGTGGTGGTAGTAACAACGt                                                   <  1:1249679/140‑1 (MQ=255)

                                                                                   cATCAACGGACCGCCCTGACCACCAGGGAAAACGGCAGAGTTCAGTTTTTTGTGCAGCTCTTCGCTACCACCTTTCGCCAGGATCAGGCCGCCGCGCGGACCCGCCAGGGTTTTGTGAGTGGTGGTAGTAACAACGTGAg                                                <  2:245222/140‑1 (MQ=255)

                                                                                   cATCAACGGACCGCCCTGACCACCAGGGAAAACGGCAGAGTTCAGTTTTTTGTGCAGCTCTTCGCTACCACCTTTCGCCAGGATCAGGCCGCCGCGCGGACCCGCCAGGGTTTTGTGAGTGGTGGTAGTAACAACGTGAg                                                >  2:658268/1‑140 (MQ=255)

                                                                                    aTCAACGGACCGCCCTGACCACCAGGGAAAACGGCAGAGTTCAGTTTTTTGTGCAGCTCTTCGCTACCACCTTTCGCCAGGATCAGGCCGCCGCGCGGACCCGCCAGGGTTTTGTGAGTGGTGGTAGTAACAACGTGAGc                                               >  2:510435/1‑140 (MQ=255)

                                                                                            aCCGCCCTGACCACCAGGGAAAACGGCAGAGTTCAGTTTTTTGTGCAGCTCTTCGCTACCACCTTTCGCCAGGATCAGGCCGCCGCGCGGACCCGCCAGGGTTTTGTGAGTGGTGGTAGTAACAACGTGAGCATGAGGaa                                       >  1:1039692/1‑140 (MQ=255)

                                                                                            aCCGCCCTGACCACCAGGGAAAACGGCAGAATTCAGTTTTTTGTGCAGCTCTTCGCTACCACCTTTCGCCAGGATCAGGCCGCCGCGCGGACCCGCCAGGGTTTTGTGAGTGGTGGTAGTAACAACGTGAGCATGAGGaa                                       <  1:210309/140‑1 (MQ=255)

                                                                                              cGCCCTGACCACCAGGGAAAACGGCAGAGTTCAGTTTTTTGTGCAGCTCTTCGCTACCACCTTTCGCCAGGATCAGGCCGCCGCGCGGACCCGCCAGGGTTTTGTGAGTGGTGGTAGTAACAACGTGAGCATGAGGAAcc                                     >  1:568473/1‑140 (MQ=255)

                                                                                                cccTGACCACCAGGGAAAACGGCAGAGTTCAGTTTTTTGTGCAGCTCTTCGCTACCACCTTTCGCCAGGATCAGGCCGCCGCGCGGACCCGCCAGGGTTTTGTGAGTGGTGGTAGTAACAACGTGAGCATGAGGAACCgg                                   >  1:854579/1‑140 (MQ=255)

                                                                                                acgtGAACACCAGGGAAAACGGCAGAGTTCAG‑TTTTTGTGCAGCTCTTCGCTACCACCTTTCGCCAGGATCATGCCGCCGCGCGGACCCGCCAGGGGTTTGTGAGTGGTGGTAGTAACAACGTGAGCATGAGGAACCggg                                  >  2:854067/4‑140 (MQ=255)

                                                                                                        accaGGGAAAACGGCAGAGTTCAGTTTTTTGTGCAGCTCTTCGCTACCACCTTTCGCCAGGATCAGGCCGCCGCGCGGACCCGCCAGGGTTTTGTGAGTGGTGGTAGTAACAACGTGAGCATGAGGAACCGGGTTAGGGt                           >  2:1185991/1‑140 (MQ=255)

                                                                                                          caGGGAAAACGGCAGAGTTCAGTTTTTTGTGCAGCTCTTCGCTACCACCTTTCGCCAGGATCAGGCCGCCGTGCGGACCCGCCAGGGTTTTGTGAGTGGTGGTAGTAACAACGTGAGCATGAGGAACCGGGTTCGGGTAg                         >  2:833093/1‑140 (MQ=255)

                                                                                                             ggAAAACGGCAGAGTTCAGTTTTTTGTGCAGCTCTTCGCTACCACCTTTCGCCAGGATCAGGCCGCCGCGCGGACCCGCCAGGGTTTTGTGAGTGGTGGTAGTAACAACGTGAGCATGAGGAACCGGGTTCGGGTAGACg                      >  2:292360/1‑140 (MQ=255)

                                                                                                                 agcGGCAGAGTTCAGTTTTTTGTGCAGCTCTTCGCTACCTCCTTTCGCGAGTATCAGGCCGCCGCGCGGACCCGCCAGGGTTTTGTGAGTGGTGGTAGTAACAACGTGAGCATGAGGAACCGGGTTCGGGTAGACGCcag                  <  2:1039692/138‑1 (MQ=255)

                                                                                                                    ggCAGAGTTCAGTTTTTTGTGCAGCTCTTCGCTACCACCTTTCGCCAGGATCAGGCCGCCGCGCGGACCCGCCAGGGTTTTGTGAGTGGTGGTAGTAACAACGTGAGCATGAGGAACCGGGTTCGGGTAGACGCcagcag               >  1:457953/1‑140 (MQ=255)

                                                                                                                        gagTTCAGTTTTTTGTGCAGCTCTTCGCTACCACCTTTCGCCAGGATCAGGCCGCCGCGCGGACCCGCCAGGGTTTTGTGAGTGGTGGTAGTAACAACGTGAGCATGAGGAACCGGGTTCGGGTAGACGCCAGCAGCAAc           >  2:536680/1‑140 (MQ=255)

                                                                                                                        gagTTCAGTTTTTTGTGCAGCTCTTCGCTACCACCTTTCGCCAGGATCAGGCCGCCGCGCGGACCCGCCAGGGTTTTGTGAGTGGTGGTAGTAACAACGTGAGCATGAGGAACCGGGTTCGGGTAGACGCCAGCAGCAAc           <  1:1181687/140‑1 (MQ=255)

                                                                                                                                ttttttGTGCAGCTCTTCGCTACCACCTTTCGCCAGGATCAGGCCGCCGCGCGGACCCGCCAGGGTTTTGTGAGTGGTGGTAGTAACAACGTGAGCATGAGGAACCGGGTTCGGGTAGACGCCAGCAGCAACCAGGCCCg   <  2:1262000/140‑1 (MQ=255)

                                                                                                                                 tttttGTGCAGCTCTTCGCTACCACCTTTCGCCAGGATCAGGCCGCCGCGCGGACCCGCCAGGGTTTTGTGAGTGGTGGTAGTAACAACGTGAGCATGAGGAACCGGGTTCGGGTAGACGCCAGCAGCAACCAGGCCCGc  <  1:536680/140‑1 (MQ=255)

TTTTTAGCGACCTGCTGCTGGTAAGTTTTGAACTCAGGCTCCATCGCTTCTTTCAGAGCAACCGCTTTACCGGCGATTACGTGCATCAACGGACCGCCCTGACCACCAGGGAAAACGGCAGAGTTCAGTTTTTTGTACAGCTCTTCGCTACCACCTTTCGCCAGGATCAGGCCGCCGCGCGGACCCGCCAGGGTTTTGTGAGTGGTGGTAGTAACAACGTGAGCATGAGGAACCGGGTTCGGGTAGACGCCAGCAGCAACCAGGCCCGC  >  NC_000913/2684627‑2684895

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 15 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

N/A