Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A11 F28 I1 R1
|
161 |
75.5 |
2581324 |
99.3% |
2563254 |
138.8 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,263,000 |
T→C |
T221A (ACC→GCC) |
tdcD ← |
propionate kinase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,263,000 | 0 | T | C | 100.0%
| 323.1
/ NA
| 87 | T221A (ACC→GCC) | tdcD | propionate kinase |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (51/36); total (51/36) |
TCTTTATTCACTACGCGTTCCAGGTCACCCAGGCTCTGGTTGGTTTGGCTGGCGACCCAGGACATCGCACCAAAGTCGACATCGCCACTGCGGGTACCCATCATCAAGCCTTCCAGCGGCGTCATTCCCATTGAGGTATCAACACTCTGACCGTTGCGAACCGCGCAGATTGACGCGCCATTGCCAAGATGCGCCACAACCAGGCCGGAGTCATCTTCCGCCAGATTCAGCAGCGAATGTGCGCGCTGGGAAACATAGCGGTGCGACGTGCCG > NC_000913/3262864‑3263136
|
tctTTATTCACTACGCGTTCCAGGTCACCCAGGCTCTGGTTGGTTTGGCTGGCGACCCAGGACATCGCACCAAAGTCGACATCGCCACTGCGGGTACCCATCATCAAGCCTTCCAGCGGCGTCATTCCCATTGAGGCATc < 2:1251916/140‑1 (MQ=255)
tttATTCACTACGCGTTCCAGGTCACCCAGGCTCTGGTTGGTTTGGCTGGCGACCCAGGACATCGCACCAAAGTCGACATCGCCACTGCGGGTACCCATCATCAAGCCTTCCAGCGGCGTCATTCCCATTGAGGCATCaa < 1:1012866/140‑1 (MQ=255)
tttATTCACTACGCGTTCCAGGTCACCCAGGCTCTGGTTGGTTTGGCTGGCGACCCAGGACATCGCACCAAAGTCGACATCGCCACTGCGGGTACCCATCATCAAGCCTTCCAGCGGCGTCATTCCCATTGAGGCATCaa > 2:765947/1‑140 (MQ=255)
aCGCGTTCCAGGTCACCCAGGCTCTGGTTGGTTTGGCTGGCGACCCAGGACATCGCACCAAAGTCGACATCGCCACTGCGGGTACCCATCATCAAGCCTTCCAGCGGCGTCATTCCCATTGAGGCATCAACACTCTGAcc > 2:249688/1‑140 (MQ=255)
aCGCGTTCCAGGTCACCCAGGCTCTGGTTGGTTTGGCTGGCGACCCAGGACATCGCACCAAAGTCGACATCGCCACTGCGGGTACCCATCATCAAGCCTTCCAGCGGCGTCATTCCCATTGAGGCATCAACACTCTGAcc > 2:1281917/1‑140 (MQ=255)
aCGCGTTCCAGGTCACCCAGGCTCTGGTTGGTTTGGCTGGCGACCCAGGACATCGCACCAAAGTCGACATCGCCACTGCGGGTACCCATCATCAAGCCTTCCAGCGGCGTCATTCCCATTGAGGCATCAACACTCTGAcc > 1:153920/1‑140 (MQ=255)
gcgTTCCAGGTCACCCAGGCTCTGGTTGGTTTGGCTGGCGACCCAGGACATCGCACCAAAGTCGACATCGCCACTGCGGGTACCCATCATCAAGCCTTCCAGCGGCGTCATTCCCATTGAGGCATc > 1:855820/1‑126 (MQ=255)
gcgTTCCAGGTCACCCAGGCTCTGGTTGGTTTGGCTGGCGACCCAGGACATCGCACCAAAGTCGACATCGCCACTGCGGGTACCCATCATCAAGCCTTCCAGCGGCGTCATTCCCATTGAGGCATc < 2:855820/126‑1 (MQ=255)
tCCAGGTCACCCAGGCTCTGGTTGGTTTGGCTGGCGACCCAGGACATCGCACCAAAGTCGACATCGCCACTGCGGGTACCCATCATCAAGCCTTCCGGCGGCGTCATTCCCATTGAGGCATCAACACTCTGa < 2:175066/132‑1 (MQ=255)
tCCAGGTCACCCAGGCTCTGGTTGGTTTGGCTGGCGACCCAGGACATCGCACCAAAGTCGACATCGCCACTGCGGGTACCCATCATCAAGCCTTCCGGCGGCGTCATTCCCATTGAGGCATCAACACTCTGa > 1:175066/1‑132 (MQ=255)
ccAGGTCACCCAGGCTCTGGTTGGTTTGGCTGGCGACCCAGGACATCGCACCAAAGTCGACATCGCCACTGCGGGTACCCATCATCAAGCCTTCCAGCGGCGTCATTCCCATTGAGGCATCAACACTCTGACCGTTGCGa > 1:1094485/1‑140 (MQ=255)
cAGGTCACCCAGGCTCTGGTTGGTTTGGCTGGCGACCCAGGACATCGCACCAAAGTCGACATCGCCACTGCGGGTACCCATCATCAAGCCTTCCAGCGGCGTCATTCCCATTGAGGCATCAACACTCTGACCGTTGCGaa < 1:1259597/140‑1 (MQ=255)
aGGTCACCCAGGCTCTGGTTGGTTTGGCTGGCGACCCAGGACATCGCACCAAAGTCGACATCGCCACTGCGGGTACCCATCATCAAGCCTTCCAGCGGCGTCATTCCCATTGAGGCATCAACACTCTGACCGTTGCGAAc > 1:3629/1‑140 (MQ=255)
ccAGGCTCTGGTTGGTTTGGCTGGCGACCCAGGACATCGCACCAAAGTCGACATCGCCACTGCGGGTACCCATCATCAAGCCTTCCAGCGGCGTCATTCCCATTGAGGCATCAACACTCTGACCGTTGCGaa > 1:1239272/1‑132 (MQ=255)
ccAGGCTCTGGTTGGTTTGGCTGGCGACCCAGGACATCGCACCAAAGTCGACATCGCCACTGCGGGTACCCATCATCAAGCCTTCCAGCGGCGTCATTCCCATTGAGGCATCAACACTCTGACCGTTGCGaa < 2:1239272/132‑1 (MQ=255)
ccAGGCTCTGGTTGGTTTGGCTGGCGACCCAGGACATCGCACCAAAGTCGACATCGCCACTGCGGGTACCCATCATCAAGCCTTCCAGCGGCGTCATTCCCATTGAGGCATCAACACTCTGACCGTTGCGAACCGCGCAg > 1:594397/1‑140 (MQ=255)
ccAGGCTCTGGTTGGTTTGGCTGGCGACCCAGGACATCGCACCAAAGTCGACATCGCCACTGCGGGTACCCATCATCAAGCCTTCCAGCGGCGTCATTCCCATTGAGGCATCAACACTCTGACCGTTGCGAACCGCGCAg > 1:641504/1‑140 (MQ=255)
ccAGGCTCTGGTTGGTTTGGCTGGCGACCCAGGACATCGCACCAAAGTCGACATCGCCACTGCGGGTACCCATCATCAAGCCTTCCAGCGGCGTCATTCCCATTGAGGCATCAACACTCTGACCGTTGCGAACCGCGCAg > 1:505049/1‑140 (MQ=255)
ccAGGCTCTGGTTGGTTTGGCTGGCGACCCAGGACATCGCACCAAAGTCGACATCGCCACTGCGGGTACCCATCATCAAGCCTTCCAGCGGCGTCATTCCCATTGAGGCATCAACACTCTGACCGTTGCGAACCGCGCAg > 1:847697/1‑140 (MQ=255)
gCTCTGGTTGGTTTGGCTGGCGACCCAGGACATCGCACCAAAGTCGACATCGCCACTGCGGGTACCCATCATCAAGCCTTCCAGCGGCGTCATTCCCATTGAGGCATCAACACTCTGACCGTTGCGAACCGCGCAGATTg > 1:883091/1‑140 (MQ=255)
gCTCTGGTTGGTTTGGCTGGCGACCCAGGACATCGCACCAAAGTCGACATCGCCACTGCGGGTACCCATCATCAAGCCTTCCAGCGGCGTCATTCCCATTGAGGCATCAACACTCTGACCGTTGCGAACCGCGCAGATTg > 1:426546/1‑140 (MQ=255)
gCTCTGGTTGGTTTGGCTGGCGACCCAGGACATCGCACCAAAGGCGACATCGCCACTGCGGGTACCCATCATCAAGCCTTCCAGCGGCGTCATTCCCATTGAGGCATCAACACTCTGACCGTGGCGAACCGCGCAGATTg > 2:1148815/1‑140 (MQ=255)
ggttggttTGGCTGGCGACCCAGGACATCGCACCAAAGTCGACATCGCCACTGCGGGTACCCATCATCAAGCCTTCCAGCGGCGTCATTCCCATTGAGGCATCAACACTCTGACCGTTGCGAACCGCGCAGATTGAcgcg > 1:1200139/1‑140 (MQ=255)
ggttggttTGGCTGGCGACCCAGGACATCGCACCAAAGTCGACATCGCCACTGCGGGTACCCATCATCAAGCCTTCCAGCGGCGTCATTCCCATTGAGGCATCAACACTCTGACCGTTGCGAACCGCGCAGATTGAcgcg > 2:1190014/1‑140 (MQ=255)
ggttggttTGGCTGACGACCCAGGACATCGCACCAAAGTCGACATCGCCACTGCGGGTACCCATCATCAAGCCTTCCAGCGGCGTCATTCCCATTGAGGCATCAACACTCTGACCGTTGCGAACCGCGCAGATTGAcgcg > 1:1223297/1‑140 (MQ=255)
gttggttTGGCTGGCGACCCAGGACATCGCACCAAAGTCGACATCGCCACTGCGGGTACCCATCATCAAGCCTTCCAGCGGCGTCATTCCCATTGAGGCATCAACACTCTGACCGTTGCGAACCGCGCAGATTGACgcgc > 2:188005/1‑140 (MQ=255)
tttGGCTGGCGACCCAGGACATCGCACCAAAGTCGACATCGCCACTGCGGGTACCCATCATCAAGCCTTCCAGCGGCGTCATTCCCATTGAGGCATCAACACTCTGACCGTTGCGAACCGCGCAGATTGACGCGCCATTg < 2:505049/140‑1 (MQ=255)
tggcGACCCAGGACATCGCACCAAAGTCGACATCGCCACTGCGGGTACCCATCATCAAGCCTTCCAGCGGCGTCATTCCCATTGAGGCATCAACACTCTGACCGTTGCGAACCGCGCAGATTGACGCGCCATTGCCAAGa < 2:719307/140‑1 (MQ=255)
ggcGACCCAGGACATCGCACCAAAGTCGACATCGCCACTGCGGGTACCCATCATCAAGCCTTCCAGCGGCGTCATTCCCATTGAGGCATCAACACTCTGACCGTTGCGAACCGCGCAGATTGACGCGCCATTGCCAAGAt < 1:378401/140‑1 (MQ=255)
aCCCAGGACATCGCACCAAAGTCGACATCGCCACTGCGGGTACCCATCATCAAGCCTTCCAGCGGCGTCATTCCCATTGAGGCATCAACACTCTGACCGTTGCGAACCGCGCAGATTGACGCGCCATTGCCAAGATgcgc < 1:820138/140‑1 (MQ=255)
cAGGACATCGCACCAAAGTCGACATCGCCACTGCGGGTACCCATCATCAAGCCTTCCAGCGGCGTCATTCCCATTGAGGCATCAACACTCTGACCGTTGCGAACCGCGCAGATTGACGCGCCATTGCCAAGATGCGCcac > 2:954672/1‑140 (MQ=255)
ggACATCGCACCAAAGTCGACATCGCCACTGCGGGTACCCATCATCAAGCCTTCCAGCGGCGTCATTCCCATTGAGGCATCAACTCTCTGACCGTTGCGAACCGCGCAGATTGACGCGCCATTGCCAAGATGCGCCACaa < 1:672346/140‑1 (MQ=255)
cGCACCAAAGTCGACATCGCCACTGCGGGTACCCATCATCAAGCCTTCCAGCGGCGTCATTCCCATTGAGGCATCAACACTCTGACCGTTGCGAACCGCGCAGATTGACGCGCCATTGCCAAGATGCGCCACAACCAGGc > 2:1174606/1‑140 (MQ=255)
cGCACCAAAGTCGACATCGCCACTGCGGGTACCCATCATCAAGCCTTCCAGCGGCGTCATTCCCATTGAGGCATCAACACTCTGACCGTTGCGAACCGCGCAGATTGACGCGCCATTGCCAAGATGCGCCACAACCAGGc < 2:1223274/140‑1 (MQ=255)
cGCACCAAAGTCGACATCGCCACTGCGGGTACCCATCATCAAGCCTTCCAGCGGCGTCATTCCCATTGAGGCATCAACACTCTGACCGTTGCGAACCGCGCAGATTGACGCGCCATTGCCAAGATGCGCCACAACCAGGc > 2:983262/1‑140 (MQ=255)
cGCACCAAAGTCGACATCGCCACTGCGGGTACCCATCATCAAGCCTTCCAGCGGCGTCATTCCCATTGAGGCATCAACACTCTGACCGTTGCGAACCGCGCAGATTGACGCGCCATTGCCAAGATGCGCCACAACCAGGc < 2:594397/140‑1 (MQ=255)
cGCACCAAAGTCGACATCGCCACTGCGGGTACCCATCATCAAGCCTTCCAGCGGCGTCATTCCCATTGAGGCATCAACACTCTGACCGTTGCGAACCGCGCAGATTGACGCGCCATTGCCAAGATGCGCCACAACCAGGc > 1:1029344/1‑140 (MQ=255)
cGCACCAAAGTCGACATCGCCACTGCGGGTACCCATCATCAAGCCTTCCAGCGGCGTCATTCCCATTGAGGCATCAACACTCTGACCGTTGCGAACCGCGCAGATTGACGCGCCATTGCCAAGATGCGCCACAACCAGGc > 1:1088099/1‑140 (MQ=255)
cGCACCAAAGTCGACATCGCCACTGCGGGTACCCATCATCAAGCCTTCCAGCGGCGTCATTCCCATTGAGGCATCAACACTCTGACCGTTGCGAACCGCGCAGATTGACGCGCCATTGCCAAGATGCGCCACAACCAGGc > 1:711901/1‑140 (MQ=255)
cGCACCAAAGTCGACATCGCCACTGCGGGTACCCATCATCAAGCCTTCCAGCGGCGTCATTCCCATTGAGGCATCAACACTCTGACCGTTGCGAACCGCGCAGATTGACGCGCCATTGCCAAGATGCGCCACAACCAGGc > 1:43395/1‑140 (MQ=255)
cGCACCAAAGTCGACATCGCCACTGCGGGTACCCATCATCAAGCCTTCCAGCGGCGTCATTCCCATTGAGGCATCAACACTCTGACCGTTGCGAACCGCGCAGATTGACGCGCCATTGCCAAGATGCGCCACAACCAGGc > 1:749763/1‑140 (MQ=255)
cGCACCAAAGTCGACATCGCCACTGCGGGTACCCATCATCAAGCCTTCCAGCGGCGTCATTCCCATTGAGGCATCAACACTCTGACCGTTGCGAACCGCGCAGATTGACGCGCCATTGCCAAGATGCGCCACAACCAGGc > 1:132016/1‑140 (MQ=255)
cGCACCAAAGTCGACATCGCCACTGCGGGTACCCATCATCAAGCCTTCCAGCGGCGTCATTCCCATTGAGGCATCAACACTCTGACCGTTGCGAACCGCGAAGATTGACGCGCCATTGCCAAGATGCGCCA‑AACCAGGcc > 2:1285747/1‑140 (MQ=255)
cACCAAAGTCGACATCGCCACTGCGGGTACCCATCATCAAGCCTTCCAGCGGCGTCATTCCCATTGAGGCATCAACACTCTGACCGTTGCGAACCGCGCAGATTGACGCGCCATTGCCAAGATGCGCCACAACCAGGCCg > 1:756536/1‑140 (MQ=255)
cACCAAAGTCGACATCGCCACTGCGGGTACCCATCATCAAGCCTTCCAGCGGCGTCATTCCCATTGAGGCATCAACACTCTGACCGTTGCGAACCGCGCAGATTGACGCGCCATTGCCAAGATGCGCCACAACCAGGCCg < 2:1181941/140‑1 (MQ=255)
cACCAAAGTCGACATCGCCACTGCGGGTACCCATCATCAAGCCTTCCAGCGGCGTCATTCCCATTGAGGCATCAACACTCTGACCGTTGCGAACCGCGCAGATTGACGCGCCATTGCCAAGATGCGCCACAACCAGGCCg < 2:3629/140‑1 (MQ=255)
cAAAGTTGACATCGCCACTGCGGGTACCCATCATCAAGCCTTCCAGCGGCGTCATTCCCATTGAGGCATCAACACTCTGACCGTTGCGAACCGCGCAGATTGACGCGCCATTGCCAAGATGCGCCACAACCAGGCCGGAg > 1:1168919/1‑140 (MQ=255)
aaaGTCGACATCGCCACTGCGGGTACCCATCATCAAGCCTTCCAGCGGCGTCATTCCCATTGAGGCATCAACACTCTGACCGTTGCGAACCGCGCAGATTGACGCGCCATTGCCAAGATGCGCCACAACCAGGCCGGAGt < 2:720333/140‑1 (MQ=255)
aaaGTCGACATCGCCACTGCGGGTACCCATCATCAAGCCTTCCAGCGGCGTCATTCCCATTGAGGCATCAACACTCTGACCGTTGCGAACCGCGCAGATTGACGCGCCATTGCCAAGATGCGCCACAACCAGGCCGGAGt < 2:711901/140‑1 (MQ=255)
tCGACATCGCCACTGCGGGTACCCATCATCAAGCCTTCCAGCGGCGTCATTCCCATTGAGGCATCAACACTCTGACCGTTGCGAACCGCGCAGATTGACGCGCCATTGCCAAGATGCGCCACAACCAGGCCGGAGTCATc > 1:476599/1‑140 (MQ=255)
cGACATCGCCACTGCGGGTACCCATCATCAAGCCTTCCAGCGGCGTCATTCCCATTGAGGCATCAACACTCTGACCGTTGCGAACCGCGCAGATTGACGCGCCATTGCCAAGATGCGCCACAACCAGGCCGGAGTCATCt < 2:476599/140‑1 (MQ=255)
aCATCGCCACTGCGGGTACCCATCATCAAGCCTTCCAGCGGCGTCATTCCCATTGAGGCATCAACACTCTGACCGTTGCGAACCGCGCAGATTGACGCGCCATTGCCAAGATGCGCCACAACCAGGCCGGAGTCATCTTc > 2:842635/1‑140 (MQ=255)
aTCGCCACTGCGGGTACCCATCATCAAGCCTTCCAGCGGCGTCATTCCCATTGAGGCATCAACACTCTGACCGTTGCGAACCGCGCAGATTGACGCGCCATTGCCAAGATGCGCCACAACCAGGCCGGAGTCATCTTCCg < 1:954672/140‑1 (MQ=255)
aTCGCCACTGCGGGTACCCATCATCAAGCCTTCCAGCGGCGTCATTCCCATTGAGGCATCAACACTCTGACCGTTGCGAACCGCGCAGATTGACGCGCCATTGCCAAGATGCGCCACAACCAGGCCGGAGTCATCTTCCg < 2:756536/140‑1 (MQ=255)
ggTACCCATCATCAAGCCTTCCAGCGGCGTCATTCCCATTGAGGCATCAACACTCTGACCGTTGCGAACCGCGCAGATTGACGCGCCATTGCCAAGATGCGCCACAACCAGGCCGGAGTCATCTTCCGCCAGATTcagca > 2:691289/1‑140 (MQ=255)
ggTACCCATCATCAAGCCTTCCAGCGGCGTCATTCCCATTGAGGCATCAACACTCTGACCGTTGCGAACCGCGCAGATTGACGCGCCATTGCCAAGATGCGCCACAACCAGGCCGGAGTCATCTTCCGCCAGATTcagca > 1:286282/1‑140 (MQ=255)
aCCCATCATCAAGCCTTCCAGCGGCGTCATTCCCATTGAGGCATCAACACTCTGACCGTTGCGAACCGCGCAGATTGACGCGCCATTGCCAAGATGCGCCACAACCAGGCCGGAGTCATCTTCCGCCAGATTCAGCAGCg < 1:991288/140‑1 (MQ=255)
atcaAGCCTTCCAGCGGCGTCATTCCCATTGAGGCATCAACACTCTGACCGTTGCGAACCGCGCAGATTGACGCGCCATTGCCAAGATGCGCCACAACCAGGCCGGAGTCATCTTCCGCCAGATTCAGCAGCGAATGTgc > 1:814188/1‑140 (MQ=255)
tcaAGCCTTCCAGCGGCGTCATTCCCATTGAGGCATCAACACTCTGACCGTTGCGAACCGCGCAGATTGACGCGCCATTGCCAAGATGCGCCACAACCAGGCCGGAGTCATCTTCCGCCAGATTCAGCAGCGAATGTgcg < 2:132016/140‑1 (MQ=255)
tcaAGCCTTCCAGCGGCGTCATTCCCATTGAGGCATCAACACTCTGACCGTTGCGAACCGCGCAGATTGACGCGCCATTGCCAAGATGCGCCACAACCAGGCCGGAGTCATCTTCCGCCAGATTCAGCAGCGAATGTgcg < 1:555091/140‑1 (MQ=255)
aaGCCTTCCAGCGGCGTCATTCCCATTGAGGCATCAACACTCTGACCGTTGCGAACCGCGCAGATTGACGCGCCATTGCCAAGATGCGCCACAACCAGGCCGGAGTCATCTTCCGCCAGATTCAGCAGCGAATGTgcgcg < 2:153920/140‑1 (MQ=255)
aaGCCTTCCAGCGGCGTCATTCCCATTGAGGCATCAACACTCTGACCGTTGCGAACCGCGCAGATTGACGCGCCATTGCCAAGATGCGCCACAACCAGGCCGGAGTCATCTTCCGCCAGATTCAGCAGCGAATGTgcgcg < 1:765947/140‑1 (MQ=255)
gCCTTCCAGCGGCGTCATTCCCATTGAGGCATCAACACTCTGACCGTTGCGAACCGCGCAGATTGACGCGCCATTGCCAAGATGCGCCACAACCAGGCCGGAGTCATCTTCCGCCAGATTCAGCAGCGAATGTGCGCGCt > 1:980693/1‑140 (MQ=255)
gCCTTCCAGCGGCGTCATTCCCATTGAGGCATCAACACTCTGACCGTTGCGAACCGCGCAGATTGACGCGCCATTGCCAAGATGCGCCACAACCAGGCCGGAGTCATCTTCCGCCAGATTCAGCAGCGAATGTGCGCGCt > 1:1229364/1‑140 (MQ=255)
ttCCAGCGGCGTCATTCCCATTGAGGCATCAACACTCTGACCGTTGCGAACCGCGCAGATTGACGCGCCATTGCCAAGATGCGCCACAACCAGGCCGGAGTCATCTTCCGCCAGATTCAGCAGCGAATGTGCGCGCTggg < 2:555888/140‑1 (MQ=255)
ttCCAGCGGCGTCATTCCCATTGAGGCATCAACACTCTGACCGTTGCGAACCGCGCAGATTGACGCGCCATTGCCAAGATGCGCCACAACCAGGCCGGAGTCATCTTCCGCCAGATTCAGCAGCGAATGTGCGCGCTggg > 1:917725/1‑140 (MQ=255)
ttCCAGCGGCGTCATTCCCATTGAGGCATCAACACTCTGACCGTTGCGAACCGCGCAGATTGACGCGCCATTGCCAAGATGCGCCACAACCAGGCCGGAGTCATCTTCCGCCAGATTCAGCAGCGAATGTGCGCGCTggg > 1:280990/1‑140 (MQ=255)
tCCAGCGGCGTCATTCCCATTGAGGCATCAACACTCTGACCGTTGCGAACCGCGCAGATTGACGCGCCATTGCCAAGATGCGCCACAACCAGGCCGGAGTCATCTTCTGCCAGATTCAGCAGCGAATGTGCGCGCt > 1:746671/1‑136 (MQ=255)
tCCAGCGGCGTCATTCCCATTGAGGCATCAACACTCTGACCGTTGCGAACCGCGCAGATTGACGCGCCATTGCCAAGATGCGCCACAACCAGGCCGGAGTCATCTTCTGCCAGATTCAGCAGCGAATGTGCGCGCt < 2:746671/136‑1 (MQ=255)
tCCAGCGGCGTCATTCCCATTGAGGCATCAACACTCTGACCGTTGCGAACCGCGCAGATTGACGCGCCATTGCCAAGATGCGCCACAACCAGGCCGGAGTCATCTTCCGCCAGATTCAGCAGCGAATGTGCGCGCTGGGa > 2:200545/1‑140 (MQ=255)
tCCAGCGGCGTCATTCCCATTGAGGCATCAACACTCTGACCGTTGCGAACCGCGCAGATTGACGCGCCATTGCCAAGATGCGCCACAACCAGGCCGGAGTCATCTTCCGCCAGATTCAGCAGCGAATGTGCGCGCTGGGa > 1:681372/1‑140 (MQ=255)
tCCAGCGGCGTCATTCCCATTGAGGCATCAACACTCTGACCGTTGCGAACCGCGCAGATTGACGCGCCATTGCCAAGATGCGCCACAACCAGGCCGGAGTCATCTTCCGCCAGATTCAGCAGCGAATGTGCGCGCTGGGa > 1:934762/1‑140 (MQ=255)
gcggcgTCATTCCCATTGAGGCATCAACACTCTGACCGTTGCGAACCGCGCAGATTGACGCGCCATTGCCAAGATGCGCCACAACCAGGCCGGAGTCATCTTCCGCCAGATTCAGCAGCGAATGTGCGCGCTGGGAAACa < 1:249688/140‑1 (MQ=255)
gcggcgTCATTCCCATTGAGGCATCAACACTCTGACCGTTGCGAACCGCGCAGATTGACGCGCCATTGCCAAGATGCGCCACAACCAGGCCGGAGTCATCTTCCGCCAGATTCAGCAGCGAATGTGCGCGCTGGGAAACa < 1:1281917/140‑1 (MQ=255)
gcggcgTCATTCCCATTGAGGCATCAACACTCTGACCGTTGCGAACCGCGCAGATTGACGCGCCATTGCCAAGATGCGCCACAACCAGGCCGGAGTCATCTTCCGCCAGATTCAGCAGCGAATGTGCGCGCTGGGAAACa < 2:847697/140‑1 (MQ=255)
gcgTCATTCCCATTGAGGCATCAACACTCTGACCGTTGCGAACCGCGCAGATTGACGCGCCATTGCCAAGATGCGCCACAACCAGGCCGGAGTCATCTTCCGCCAGATTCAGCAGCGAATGTGCGCGCTGGGAAACATAg < 2:814188/140‑1 (MQ=255)
gcgTCATTCCCATTGAGGCATCAACACTCTGACCGTTGCGAACCGCGCAGATTGACGCGCCATTGCCAAGATGCGCCACAACCAGGCCGGAGTCATCTTCCGCCAGATTCAGCAGCGAATGTGCGCGCTGGGAAACATAg > 2:792435/1‑140 (MQ=255)
gcgTCATTCCCATTGAGGCATCAACACTCTGACCGTTGCGAACCGCGCAGATTGACGCGCCATTGCCAAGATGCGCCACAACCAGGCCGGAGTCATCTTCCGCCAGATTCAGCAGCGAATGTGCGCGCTGGGAAACATAg < 2:641504/140‑1 (MQ=255)
tCATTCCCATTGAGGCATCAACACTCTGACCGTTGCGAACCGCGCAGATTGACGCGCCATTGCCAAGATGCGCCACAACCAGGCCGGAGTCATCTTCCGCCAGATTCAGCAGCGAATGTGCGCGCTggg < 2:866285/129‑1 (MQ=255)
tCATTCCCATTGAGGCATCAACACTCTGACCGTTGCGAACCGCGCAGATTGACGCGCCATTGCCAAGATGCGCCACAACCAGGCCGGAGTCATCTTCCGCCAGATTCAGCAGCGAATGTGCGCGCTggg > 1:866285/1‑129 (MQ=255)
tCATTCCCATTGAGGCATCAACACTCTGACCGTTGCGAACCGCGCAGATTGACGCGCCATTGCCAAGATGCGCCACAACCAGGCCGGAGTCATCTTCCGCCAGATTCAGCAGCGAATGTGCGCGCTGGGAAACATAGCgg > 2:697858/1‑140 (MQ=255)
tCATTCCCATTGAGGCATCAACACTCTGACCGTTGCGAACCGCGCAGATTGACGCGCCATTGCCAAGATGCGCCACAACCAGGCCGGAGTCATCTTCCGCCAGATTCAGCAGCGAATGTGCGCGCTGGGAAACATAGCgg > 2:1220581/1‑140 (MQ=255)
aTTGAGGCATCAACACTCTGACCGTTGCGAACCGCGCAGATTGACGCGCCATTGCCAAGATGCGCCACAACCAGGCCGGAGTCATCTTCCGCCAGATTCAGCAGCGAATGTGCGCGCTGGGAAACa > 1:98239/1‑126 (MQ=255)
aTTGAGGCATCAACACTCTGACCGTTGCGAACCGCGCAGATTGACGCGCCATTGCCAAGATGCGCCACAACCAGGCCGGAGTCATCTTCCGCCAGATTCAGCAGCGAATGTGCGCGCTGGGAAACa < 2:98239/126‑1 (MQ=255)
ttGAGGCATCAACACTCTGACCGTTGCGAACCGCGCAGATTGACGCGCCATTGCCAAGATGCGCCACAACCAGGCCGGAGTCATCTTCCGCCAGATTCAGCAGCGAATGTGCGCGCTGGGAAACATAGCGGTGCGACGTg < 1:792435/140‑1 (MQ=255)
tGAGGCATCAACACTCTGACCGTTGCGAACCGCGCAGATTGACGCGCCATTGCCAAGATGCGCCACAACCAGGCCGGAGTCATCTTCCGCCAGATTCAGCAGCGAATGTGCGCGCTGGGAAACATAGCGGTGCGACGTGc > 2:679891/1‑140 (MQ=255)
aGGCATCAACACTCTGACCGTTGCGAACCGCGCAGATTGACGCGCCATTGCCAAGATGCGCCACAACCAGGCCGGAGTCATCTTCCGCCAGATTCAGCAGCGAATGTGCGCGCTGGGAAACATAGCGGTGCGACGTGCCg < 2:1094485/140‑1 (MQ=255)
|
TCTTTATTCACTACGCGTTCCAGGTCACCCAGGCTCTGGTTGGTTTGGCTGGCGACCCAGGACATCGCACCAAAGTCGACATCGCCACTGCGGGTACCCATCATCAAGCCTTCCAGCGGCGTCATTCCCATTGAGGTATCAACACTCTGACCGTTGCGAACCGCGCAGATTGACGCGCCATTGCCAAGATGCGCCACAACCAGGCCGGAGTCATCTTCCGCCAGATTCAGCAGCGAATGTGCGCGCTGGGAAACATAGCGGTGCGACGTGCCG > NC_000913/3262864‑3263136
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
