Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A2 F28 I1 R1	155	60.3	2039550	99.3%	2025273	138.7

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,051,390	T→C	G2151G (GGT→GGC)	yeeJ →	inverse autotransporter adhesin

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,051,390	0	T	C	100.0%	425.5 / NA	120	G2151G (GGT→GGC)	yeeJ	inverse autotransporter adhesin
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (57/63); total (57/63)

Only 100 of 120 total aligned reads displayed.

AACGTGCCCTATATAAAAATTAGCGCAATTGATTACAGTCTAAATATCAACGGTGATTACAAAGCCACTGTTACAGGAGGCGGAGAGGGTATCGCAACGCTGATCCCTGTATTGAATGGTGTTCATCAAGCTGGTCTGAGTACCACAATACAATTCACTCGCGCAGAAGACAAAATAATGAGCGGTACAGTATCAGTCAATGGTACTGACCTACCGACAACTACATTCCCTTCGCAGGGGTTCACCGGGGCGTATTATCAGTTGAATAATG  >  NC_000913/2051256‑2051526

aaCGTGCCCTATATAAAAATTAGCGCAATTGATTACAGTCTAAATATCAACGGTGATTACAAAGCCACTGTTACAGGAGGCGGAGAGGGTATCGCAACGCTGATCCCTGTATTGAATGGTGTTCATCAAGCTGGCCTGAg                                                                                                                                     <  2:523445/140‑1 (MQ=255)

 aCGTGCCCTATATAAAAATTAGCGCAATTGATTACAGTCTAAATATCAACGGTGATTACAAAGCCACTGTTACAGGAGGCGGAGAGGGTATCGCAACGCTGATCCCTGTATTGAATGGTGTTCATCAAGCTGGCCTGAGt                                                                                                                                    >  1:324891/1‑140 (MQ=255)

 aCGTGCCCTATATAAAAATTAGCGCAATTGATTACAGTCTAAATATCAACGGTGATTACAAAGCCACTGTTACAGGAGGCGGAGAGGGTATCGCAACGCTGATCCCTGTATTGAATGGTGTTCATCAAGCTGGCCTGAGt                                                                                                                                    >  1:311927/1‑140 (MQ=255)

   gTGCCCTATATAAAAATTAGCGCAATTGATTACAGTCTAAATATCAACGGTGATTACAAAGCCACTGTTACAGGAGGCGGAGAGGGTATCGCAACGCTGATCCCTGTATTGAATGGTGTTCATCAAGCTGGCCTGAGTAc                                                                                                                                  <  2:75966/140‑1 (MQ=255)

    tGCCCTATATAAAAATTAGCGCAATTGATTACAGTCTAAATATCAACGGTGATTACAAAGCCACTGTTACAGGAGGCGGAGAGGGTATCGCAACGCTGATCCCTGTATTGAATGGTGTTCATCAAGCTGGCCTGAGTAcc                                                                                                                                 >  2:474222/1‑140 (MQ=255)

     gCCCTATATAAAAATTAGCGCAATTGATTACAGTCTAAATATCAACGGTGATTACAAAGCCACTGTTACAGGAGGCGGAGAGGGTATCGCAACGCTGATCCCTGTATTGAATGGTGTTCATCAAGCTGGCCTGAGTACca                                                                                                                                >  2:982450/1‑140 (MQ=255)

     gCCCTATATAAAAATTAGCGCAATTGATTACAGTCTAAATATCAACGGTGATTACAAAGCCACTGTTACAGGAGGCGGAGAGGGTATCGCAACGCTGATCCCTGTATTGAATGGTGTTCATCAAGCTGGCCTGAGTACca                                                                                                                                >  2:33880/1‑140 (MQ=255)

     gCCCTATATAAAAATTAGCGCAATTGATTACAGTCTAAATATCAACGGTGATTACAAAGCCACTGTTACAGGAGGCGGAGAGGGTATCGCAACGCTGATCCCTGTATTGAATGGTGTTCATCAAGCTGGCCTGAGTACca                                                                                                                                <  2:311927/140‑1 (MQ=255)

     gCCCTATATAAAAATTAGCGCAATTGATTACAGTCTAAATATCAACGGTGATTACAAAGCCACTGTTACAGGAGGCGGAGAGGGTATCGCAACGCTGATCCCTGTATTGAATGGTGTTCATCAAGCTGGCCTGAGTACca                                                                                                                                >  1:581844/1‑140 (MQ=255)

     gCCCTATATAAAAATTAGCGCAATTGATTACAGTCTAAATATCAACGGTGATTACAAAGCCACTGTTACAGGAGGCGGAGAGGGTATCGCAACGCTGATCCCTGTATTGAATGGTGTTCATCAAGCTGGCCTGAGTACca                                                                                                                                >  2:923103/1‑140 (MQ=255)

      cccTATATAAAAATTAGCGCAATTGATTACAGTCTAAATATCAACGGTGATTACAAAGCCACTGTTACAGGAGGCGGAGAGGGTATCGCAACGCTGATCCCTGTATTGAATGGTGTTCATCAAGCTGGCCTGAGTAc                                                                                                                                  >  1:501435/1‑137 (MQ=255)

      cccTATATAAAAATTAGCGCAATTGATTACAGTCTAAATATCAACGGTGATTACAAAGCCACTGTTACAGGAGGCGGAGAGGGTATCGCAACGCTGATCCCTGTATTGAATGGTGTTCATCAAGCTGGCCTGAGTAc                                                                                                                                  <  2:501435/137‑1 (MQ=255)

      cccTATATAAAAATTAGCGCAATTGATTACAGTCTAAATATCAACGGTGATTACAAAGCCACTGTTACAGGAGGCGGAGAGGGTATCGCAACGCTGATCCCTGTATTGAATGGTGTTCATCAAGCTGGCCTGAGTACcac                                                                                                                               >  2:298763/1‑140 (MQ=255)

      cccTATATAAAAATTAGCGCAATTGATTACAGTCTAAATATCAACGGTGATTACAAAGCCACTGTTACAGGAGGCGGAGAGGGTATCGCAACGCTGATCCCTGTATTGAATGGTGTTCATCAAGCTGGCCTGAGTACcac                                                                                                                               >  2:421010/1‑140 (MQ=255)

        cTATATAAAAATTAGCGCAATTGATTACAGTCTAAATATCAACGGTGATTACAAAGCCACTGTTACAGGAGGCGGAGAGGGTATCGCAACGCTGATCCCTGTATTGAATGGTGTTCATCAAGCTGGCCTGAGTACCacaa                                                                                                                             <  1:976665/140‑1 (MQ=255)

         tatataAAAATTAGCGCAATTGATTACAGTCTAAATATCAACGGTGATTACAAAGCCACTGTTACAGGAGGCGGAGAGGGTATCGCAACGCTGATCCCTGTATTGAATGGTGTTCATCAAGCTGGCCTGAGTACCacaat                                                                                                                            >  1:125103/1‑140 (MQ=255)

                    tAGCGCAATTGATTACAGTCTAAATATCAACGGTGATTACAAAGCCACTGTTACAGGAGGCGGAGAGGGTATCGCAACGCTGATCCCTGTATTGAATGGTGTTCATCAAGCTGGCCTGAGTACCACAATACAATTCACTc                                                                                                                 <  2:20063/140‑1 (MQ=255)

                     aGCGCAATTGATTACAGTCTAAATATCAACGGTGATTACAAAGCCACTGTTACAGGAGGCGGAGAGGGTATCGCAACGCTGATCCCTGTATTGAATGGTGTTCATCAAGCTGGCCTGAGTACCACAATACAATTCACTcg                                                                                                                >  1:512984/1‑140 (MQ=255)

                     aGCGCAATTGATTACAGTCTAAATATCAACGGTGATTACAAAGCCACTGTTACAGGAGGCGGAGAGGGTATCGCAACGCTGATCCCTGTATTGAATGGTGTTCATCAAGCTGGCCTGAGTACCACAATACAATTCACTcg                                                                                                                >  1:705500/1‑140 (MQ=255)

                     aGCGCAATTGATTACAGTCTAAATATCAACGGTGATTACAAAGCCACTGTTACAGGAGGCGGAGAGGGTATCGCAACGCTGATCCCTGTATTGAATGGTGTTCATCAAGCTGGCCTGAGTACCACAATACAATTCACTcg                                                                                                                >  1:325696/1‑140 (MQ=255)

                     aGCGCAATTGATTACAGTCTAAATATCAACGGTGATTACAAAGCCACTGTTACAGGAGGCGGAGAGGGTATCGCAACGCTGATCCCTGTATTGAATGGTGTTCATCAAGCTGGCCTGAGTACCACAATACAATTCACTcg                                                                                                                >  1:289101/1‑140 (MQ=255)

                       cgcAATTGATTACAGTCTAAATATCAACGGTGATTACAAAGCCACTGTTACAGGAGGCGGAGAGGGTATCGCAACGCTGATCCCTGTATTGAATGGTGTTCATCAAGCTGGCCTGAGTACCACAATACAATTCACTcgcg                                                                                                              <  2:668399/140‑1 (MQ=255)

                       cgcAATTGATTACAGTCTAAATATCAACGGTGATTACAAAGCCACTGTTACAGGAGGCGGAGAGGGTATCGCAACGCTGATCCCTGTATTGAATGGTGTTCATCAAGCTGGCCTGAGTACCACAATACAATTCACTcgcg                                                                                                              >  1:668399/1‑140 (MQ=255)

                        gcAATTGATTACAGTCTAAATATCAACGGTGATTACAAAGCCACTGTTACAGGAGGCGGAGAGGGTATCGCAACGCTGATCCCTGTATTGAATGGTGTTCATCAAGCTGGCCTGAGTACCACAATACAATTCACTCgcgc                                                                                                             >  2:5571/1‑140 (MQ=255)

                                      tCTAAATATCAACGGTGATTACAAAGCCACTGTTACAGGAGGCGGAGAGGGTATCGCAACGCTGATCCCTGTATTGAATGGTGTTCATCAAGCTGGCCTGAGTACCACAATACAATTCACTc                                                                                                                 <  2:656987/122‑1 (MQ=255)

                                      tCTAAATATCAACGGTGATTACAAAGCCACTGTTACAGGAGGCGGAGAGGGTATCGCAACGCTGATCCCTGTATTGAATGGTGTTCATCAAGCTGGCCTGAGTACCACAATACAATTCACTc                                                                                                                 >  1:656987/1‑122 (MQ=255)

                                      tCTAAATATCAACGGTGATTACAAAGCCACTGTTACAGGAGGCGGAGAGGGTATCGCAACGCTGATCCCTGTATTGAATGGTGTTCATCAAGCTGGCCTGAGTACCACAATACAATTCACTCgcgc                                                                                                             >  1:986919/1‑126 (MQ=255)

                                      tCTAAATATCAACGGTGATTACAAAGCCACTGTTACAGGAGGCGGAGAGGGTATCGCAACGCTGATCCCTGTATTGAATGGTGTTCATCAAGCTGGCCTGAGTACCACAATACAATTCACTCGCGCAGAAGACAAaataa                                                                                               >  1:461895/1‑140 (MQ=255)

                                      tCTAAATATCAACGGTGATTACAAAGCCACTGTTACAGGAGGCGGAGAGGGTATCGCAACGCTGATCCCTGTATTGAATGGTGTTCATCAAGCTGGCCTGAGTACCACAATACAATTCACTCGCGCAGAAGACAAaataa                                                                                               >  2:323568/1‑140 (MQ=255)

                                      tCTAAATATCAACGGTGATTACAAAGCCACTGTTACAGGAGGCGGAGAGGGTATCGCAACGCTGATCCCTGTATTGAATGGTGTTCATCAAGCTGGCCTGAGTACCACAATACAATTCACTCGCGCAGAAGACAAaataa                                                                                               >  2:225073/1‑140 (MQ=255)

                                        tAAATATCAACGGTGATTACAAAGCCACTGTTACAGGAGGCGGAGAGGGTATCGCAACGCTGATCCCTGTATTGAATGGTGTTCATCAAGCTGGCCTGAGTACCACAATACAATTCACTCGCGCAGAAGACAAAATAATg                                                                                             <  2:1012743/140‑1 (MQ=255)

                                        tAAATATCAACGGTGATTACAAAGCCACTGTTACAGGAGGCGGAGAGGGTATCGCAACGCTGATCCCTGTATTGAATGGTGTTCATCAAGCTGGCCTGAGTACCACAATACAATTCACTCGCGCAGAAGACAAAATAATg                                                                                             >  1:82801/1‑140 (MQ=255)

                                          aaTATCAACGGTGATTACAAAGCCTCTGTTACAGGAGGCGGAGAGGGTATCGCAACGCTGATCCCTGTATTGAATGGTGTTCATCAAGCTGGCCTGAGTACCACAATACAATTCACTCGCGCAGAAGACAAAATAATGAg                                                                                           <  2:572115/140‑1 (MQ=255)

                                          aaTATCAACGGTGATTACAAAGCCACTGTTACAGGAGGCGGAGAGGGTATCGCAACGCTGATCCCTGTATTGAATGGTGTTCATCAAGCTGGCCTGAGTACCACAATACAATTCACTCGCGCAGAAGACAAAATAATGAg                                                                                           <  1:923103/140‑1 (MQ=255)

                                          aaTATCAACGGTGATTACAAAGCCACTGTTACAGGAGGCGGAGAGGGTATCGCAACGCTGATCCCTGTATTGAATGGTGTTCATCAAGCTGGCCTGAGTACCACAATACAATTCACTCGCGCAGAAGACAAAATAATGAg                                                                                           <  2:172998/140‑1 (MQ=255)

                                          aaTATCAACGGTGATTACAAAGCCACTGTTACAGGAGGCGGAGAGGGTATCGCAACGCTGATCCCTGTATTGAATGGTGTTCATCAAGCTGGCCTGAGTACCACAATACAATTCACTCGCGCAGAAGACAAAATAATGAg                                                                                           <  2:325696/140‑1 (MQ=255)

                                          aaTATCAACGGTGATTACAAAGCCACTGTTACAGGAGGCGGAGAGGGTATCGCAACGCTGATCCCTGTATTGAATGGTGTTCATCAAGCTGGCCTGAGTACCACAATACAATTCACTCGCGCAGAAGACAAAATAATGAg                                                                                           <  2:581844/140‑1 (MQ=255)

                                          aaTATCAACGGTGATTACAAAGCCACTGTTACAGGAGGCGGAGAGGGTATCGCAACGCTGATCCCTGTATTGAATGGTGTTCATCAAGCTGGCCTGAGTACCACAATACAATTCACTCGCGCAGAAGACAAAATAATGAg                                                                                           <  2:82801/140‑1 (MQ=255)

                                           atatCAACGGTGATTACAAAGCCACTGTTACAGGAGGCGGAGAGGGTATCGCAACGCTGATCCCTGTATTGAATGGTGTTCATCAAGCTGGCCTGAGTACCACAATACAATTCACTCGCGCAGAAGACAAAATAATGAGc                                                                                          <  2:136633/140‑1 (MQ=255)

                                           atatCAACGGTGATTACAAAGCCACTGTTACAGGAGGCGGAGAGGGTATCGCAACGCTGATCCCTGTATTGAATGGTGTTCATCAAGCTGGCCTGAGTACCACAATACAATTCACTCGCGCAGAAGACAAAATAATGAGc                                                                                          <  2:324891/140‑1 (MQ=255)

                                           atatCAACGGTGATTACAAAGCCACTGTTACAGGAGGCGGAGAGGGTATCGCAACGCTGATCCCTGTATTGAATGGTGTTCATCAAGCTGGCCTGAGTACCACAATACAATTCACTCGCGCAGAAGACAAAATAATGAGc                                                                                          >  2:1010689/1‑140 (MQ=255)

                                           atatCAACGGTGATTACAAAGCCACTGTTACAGGAGGCGGAGAGGGTATCGCAACGCTGATCCCTGTATTGAATGGTGTTCATCAAGCTGGCCTGAGTACCACAATACAATTCACTCGCGCAGAAGACAAAATAATGAGc                                                                                          <  1:474222/140‑1 (MQ=255)

                                             atCAACGGTGATTACAAAGCCACTGTTACAGGAGGCGGAGAGGGTATCGCAACGCTGATCCCTGTATTGAATGGTGTTCATCAAGCTGGCCTGAGTACCACAATACAATTCACTCGCGCAGAAGACAAAATAATGAGCgg                                                                                        >  2:126214/1‑140 (MQ=255)

                                               cAACGGTGATTACAAAGCCACTGTTACAGGAGGCGGAGAGGGTATCGCAACGCTGATCCCTGTATTGAATGGTGTTCATCAAGCTGGCCTGAGTACCACAATACAATTCACTCGCGCAGAAGACAAAATAATGAGCGGTa                                                                                      <  1:1010689/140‑1 (MQ=255)

                                               cAACGGTGATTACAAAGCCACTGTTACAGGAGGCGGAGAGGGTATCGCAACGCTGATCCCTGTATTGAATGGTGTTCATCAAGCTGGCCTGAGTACCACAATACAATTCACTCGCGCAGAAGACAAAATAATGAGCGGTa                                                                                      <  2:705500/140‑1 (MQ=255)

                                                aaCGGTGATTACAAAGCCACTGTTACAGGAGGCGGAGAGGGTATCGCAACGCTGATCCCTGTATTGAATGGTGTTCATCAAGCTGGCCTGAGTACCACAATACAATTCACTCGCGCAGAAGACAAAATAATGAg                                                                                           >  1:26238/1‑134 (MQ=255)

                                                aaCGGTGATTACAAAGCCACTGTTACAGGAGGCGGAGAGGGTATCGCAACGCTGATCCCTGTATTGAATGGTGTTCATCAAGCTGGCCTGAGTACCACAATACAATTCACTCGCGCAGAAGACAAAATAATGAg                                                                                           >  2:305188/1‑134 (MQ=255)

                                                aaCGGTGATTACAAAGCCACTGTTACAGGAGGCGGAGAGGGTATCGCAACGCTGATCCCTGTATTGAATGGTGTTCATCAAGCTGGCCTGAGTACCACAATACAATTCACTCGCGCAGAAGACAAAATAATGAg                                                                                           <  1:305188/134‑1 (MQ=255)

                                                aaCGGTGATTACAAAGCCACTGTTACAGGAGGCGGAGAGGGTATCGCAACGCTGATCCCTGTATTGAATGGTGTTCATCAAGCTGGCCTGAGTACCACAATACAATTCACTCGCGCAGAAGACAAAATAATGAg                                                                                           <  2:26238/134‑1 (MQ=255)

                                                aaCGGTGATTACAAAGCCACTGTTACAGGAGGCGGAGAGGGTATCGCAACGCTGATCCCTGTATTGAATGGTGTTCATCAAGCTGGCCTGAGTACCACAATACAATTCACTCGCGCAGAAGACAAAATAATGAGCGGTAc                                                                                     >  1:320542/1‑140 (MQ=255)

                                                  cGGTGATTACAAAGCCACTGTTACAGGAGGCGGAGAGGGTATCGCAACGCTGATCCCTGTATTGAATGGTGTTCATCAAGCTGGCCTGAGTACCACAATACAATTCACTCGCGCAGAAGACAAAATAATGAGCGGTACAg                                                                                   >  1:325173/1‑140 (MQ=255)

                                                    gTGATTACAAAGCCACTGTTACAGGAGGCGGAGAGGGTATCGCAACGCTGATCCCTGTATTGAATGGTGTTCATCAAGCTGGCCTGAGTACCACAATACAATTCACTCGCGCAGAAGACAAAATAATGAg                                                                                           <  1:474969/130‑1 (MQ=255)

                                                    gTGATTACAAAGCCACTGTTACAGGAGGCGGAGAGGGTATCGCAACGCTGATCCCTGTATTGAATGGTGTTCATCAAGCTGGCCTGAGTACCACAATACAATTCACTCGCGCAGAAGACAAAATAATGAGCGGTACAGTa                                                                                 >  2:213487/1‑140 (MQ=255)

                                                     tGATTACAAAGCCACTGTTACAGGAGGCGGAGAGGGTATCGCAACGCTGATCCCTGTATTGAATGGTGTTCATCAAGCTGGCCTGAGTACCACAATACAATTCACTCGCGCAGAAGACAAAATAATGAGCGGTACAGTAt                                                                                <  1:865662/140‑1 (MQ=255)

                                                       aTTACAAAGCCACTGTTACAGGAGGCGGAGAGGGTATCGCAACGCTGATCCCTGTATTGAATGGTGTTCATCAAGCTGGCCTGAGTACCACAATACAATTCACTCGCGCAGAAGACAAAATAATGAGc                                                                                          <  2:929636/128‑1 (MQ=255)

                                                       aTTACAAAGCCACTGTTACAGGAGGCGGAGAGGGTATCGCAACGCTGATCCCTGTATTGAATGGTGTTCATCAAGCTGGCCTGAGTACCACAATACAATTCACTCGCGCAGAAGACAAAATAATGAGc                                                                                          >  1:929636/1‑128 (MQ=255)

                                                            aaaGCTACTGTTACAGGAGGCGGAGAGGGTATCGCAACGCTGATCCCTGTATTGAATGGTGTTCATCAAGCTGGCCTGAGTACCACAATACAATTCACTCGCGCAGAAGACAAAATAATGAGCGGTACAGTATCAGTCaa                                                                         <  2:310274/140‑1 (MQ=255)

                                                            aaaGCCACTGTTACAGGAGGCGGAGAGGGTATCGCAACGCTGATCCCTGTATTGAATGGTGTTCATCAAGCTGGCCTGAGTACCACAATACAATTCACTCGCGCAGAAGACAAAATAATGAGCGGTACAGTATCAGTCaa                                                                         <  2:125103/140‑1 (MQ=255)

                                                            aaaGCCACTGTTACAGGAGGCGGAGAGGGTATCGCAACGCTGATCCCTGTATTGAATGGTGTTCATCAAGCTGGCCTGAGTACCACAATACAATTCACTCGCGCAGAAGACAAAATAATGAGCGGTACAGTATCAGTCaa                                                                         <  1:868500/140‑1 (MQ=255)

                                                               gCCACTGTTACAGGAGGCGGAGAGGGTATCGCAACGCTGATCCCTGTATTGAATGGTGTTCATCAAGCTGGCCTGAGTACCACAATACAATTCACTCGCGCAGAAGACAAAATAATGAGCGGTACAGTATCAGTCAATgg                                                                      >  2:750248/1‑140 (MQ=255)

                                                                ccACTGTTACAGGAGGCGGAGAGGGTATCGCAACGCTGATCCCTGTATTGAATGGTGTTCATCAAGCTGGCCTGAGTACCACAATACAATTCACTCGCGCAGAAGACAAAATAATGAGCGGTACAGTATCAGTCAATGGt                                                                     <  2:325173/140‑1 (MQ=255)

                                                                 cACTGTTACAGGAGGCGGAGAGGGTATCGCAACGCTGATCCCTGTATTGAATGGTGTTCATCAAGCTGGCCTGAGTACCACAATACAATTCACTCGCGCAGAAGACAAAATAATGAGCGGTACAGTATCAGTCAATGGTa                                                                    <  2:699069/140‑1 (MQ=255)

                                                                  aCTGTTACAGGAGGCGGAGAGGGTATCGCAACGCTGATCCCTGTATTGAATGGTGTTCATCAAGCTGGCCTGAGTACCACAATACAATTCACTCGCGCAGAAGACAAAATAATGAGCGGTACAGTATCAGTCAATGGTAc                                                                   >  2:509729/1‑140 (MQ=255)

                                                                      ttACAGGAGGCGGAGAGGGTATCGCAACGCTGATCCCTGTATTGAATGGTGTTCATCAAGCTGGCCTGAGTACCACAATACAATTCACTCGCGCAGAAGACAAAATAATGAGCGGTACAGTATCAGTCAATGGTACTGAc                                                               <  2:461895/140‑1 (MQ=255)

                                                                           ggaggCGGAGAGGGTATCGCAACGCTGATCCCTGTATTGAATGGTGTTCATCAAGCTGGCCTGAGTACCACAATACAATTCACTCGCGCAGAAGACAAAATAATGAGCGGTACAGTATCAGTCAATGGTACTGACCTAcc                                                          <  1:5571/140‑1 (MQ=255)

                                                                           ggaggCGGAGAGGGTATCGCAACGCTGATCCCTGTATTGAATGGTGTTCATCAAGCTGGCCTGAGTACCACAATACAATTCACTCGCGCAGAAGACAAAATAATGAGCGGTACAGTATCAGTCAATGGTACTGACCTAcc                                                          <  1:225073/140‑1 (MQ=255)

                                                                           ggaggCGGAGAGGGTATCGCAACGCTGATCCCTGTATTGAATGGTGTTCATCAAGCTGGCCTGAGTACCACAATACAATTCACTCGCGCAGAAGACAAAATAATGAGCGGTACAGTATCAGTCAATGGTACTGACCTAcc                                                          <  1:213487/140‑1 (MQ=255)

                                                                           ggaggCGGAGAGGGTATCGCAACGCTGATCCCTGTATTGAATGGTGTTCATCAAGCTGGCCTGAGTACCACAATACAATTCACTCGCGCAGAAGACAAAATAATGAGCGGTACAGTATCAGTCAATGGTACTGACCTAcc                                                          <  1:191831/140‑1 (MQ=255)

                                                                             aggCGGAGAGGGTATCGCAACGCTGATCCCTGTATTGAATGGTGTTCATCAAGCTGGCCTGAGTACCACAATACAATTCACTCGCGCAGAAGACAAAATAATGAGCGGTACAGTATCAGTCAATGGTACTGACCTACCGa                                                        <  1:298763/140‑1 (MQ=255)

                                                                             aggCGGAGAGGGTATCGCAACGCTGATCCCTGTATTGAATGGTGTTAATCAAGCTGGCCTGAGTACCACAATACAATTCACTCGCGCAGAAGACAAAATAATGAGCGGTACAGTATCAGTCAATGGTACTGACCTACCGa                                                        <  1:1006566/140‑1 (MQ=255)

                                                                              ggCGGAGAGGGTATCGCAACGCTGATCCCTGTATTGAATGGTGTTCATCAAGCTGGCCTGAGTACCACAATACAATTCACTCGCGCAGAAGACAAAATAATGAGCGGTACAGTATCAGTCAATGGTACTGACCTACCGAc                                                       <  1:126214/140‑1 (MQ=255)

                                                                                cGGAGAGGGTATCGCAACGCTGATCCCTGTATTGAATGGTGTTCATCAAGCTGGCCTGAGTACCACAATACAATTCACTCGCGCAGAAGACAAAATAATGAGCGGTACAGTATCAGTCAATGGTACTGACCTACCGa                                                        >  2:38873/1‑137 (MQ=255)

                                                                                cGGAGAGGGTATCGCAACGCTGATCCCTGTATTGAATGGTGTTCATCAAGCTGGCCTGAGTACCACAATACAATTCACTCGCGCAGAAGACAAAATAATGAGCGGTACAGTATCAGTCAATGGTACTGACCTACCGa                                                        <  1:38873/137‑1 (MQ=255)

                                                                                cGGAGAGGGTATCGCAACGCTGATCCCTGTATTGAATGGTGTTCATCAAGCTGGCCTGAGTACCACAATACAATTCACTCGCGCAGAAGACAAAATAATGAGCGGTACAGTATCAGTCAATGGTACTGACCTACCGACaa                                                     >  1:591843/1‑140 (MQ=255)

                                                                                cGGAGAGGGTATCGCAACGCTGATCCCTGTATTGAATGGTGTTCATCAAGCTGGCCTGAGTACCACAATACAATTCACTCGCGCAGAAGACAAAATAATGAGCGGTACAGTATCAGTCAATGGTACTGACCTACCGACaa                                                     >  2:869298/1‑140 (MQ=255)

                                                                                 ggAGAGGGTATCGCAACGCTGATCCCTGTATTGAATGGTGTTCATCAAGCTGGCCTGAGTACCACAATACAATTCACTCGCGCAGAAGACAAAATAATGAGCGGTACAGTATCAGTCAATGGTACTGACCTACCGACAAc                                                    <  2:1005920/140‑1 (MQ=255)

                                                                                   agagGGTATCGCAACGCTGATCCCTGTATTGAATGGTGTTCATCAAGCTGGCCTGAGTACCACAATACAATTCACTCGCGCAGAAGACAAAATAATGAGCGGTACAGTATCAGTCAATGGTACTGAc                                                               >  1:823124/1‑127 (MQ=255)

                                                                                   agagGGTATCGCAACGCTGATCCCTGTATTGAATGGTGTTCATCAAGCTGGCCTGAGTACCACAATACAATTCACTCGCGCAGAAGACAAAATAATGAGCGGTACAGTATCAGTCAATGGTACTGAc                                                               <  2:823124/127‑1 (MQ=255)

                                                                                    gagGGTATCGCAACGCTGATCCCTGTATTGAATGGTGTTCATCAAGCTGGCCTGAGTACCACAATACAATTCACTCGCGCAGAAGACAAAATAATGAGCGGTACAGTATCAGTCAATGGTACTGACCTACCGACAACTAc                                                 <  1:869298/140‑1 (MQ=255)

                                                                                             gCAACGCTGATCCCTGTATTGAATGGTGTTCATCAAGCTGGCCTGAGTACCACAATACAATTCACTCGCGCAGAAGACAAAATAATGAGCGGTACAGTATCAGTCAATGGTACTGACCTACCGACAACTACATTCCCTTc                                        >  1:997367/1‑140 (MQ=255)

                                                                                              cAACGCTGATCCCTGTATTGAATGGTGTTCATCAAGCTGGCCTGAGTACCACAATACAATTCACTCGCGCAGAAGACAAAATAATGAGCGGTACAGTATCAGTCAATGGTACTGACCTACCGACAACTACATTCCCTTCg                                       <  2:512984/140‑1 (MQ=255)

                                                                                               aaCGCTGATCCCTGTATTGAATGGTGTTCATCAAGCTGGCCTGAGTACCACAATACAATTCACTCGCGCAGAAGACAAAATAATGAGCGGTACAGTATCAGTCAATGGTACTGACCTACCGACAACTACATTCCCTTCGc                                      >  1:514129/1‑140 (MQ=255)

                                                                                               aaCGCTGATCCCTGTATTGAATGGTGTTCATCAAGCTGGCCTGAGTACCACAATACAATTCACTCGCGCAGAAGACAAAATAATGAGCGGTACAGTATCAGTCAATGGTACTGACCTACCGACAACTACATTCCCTTCGc                                      >  1:470845/1‑140 (MQ=255)

                                                                                                 cGCTGATCCCTGTATTGAATGGTGTTCATCAAGCTGGCCTGAGTACCACAATACAATTCACTCGCGCAGAAGACAAAATAATGAGCGGTACAGTATCAGTCAATGGTACTGACCTACCGACAACTACATTCCCTTCGCAg                                    >  2:591495/1‑140 (MQ=255)

                                                                                                   cTGATCCCTGTATTGAATGGTGTTCATCAAGCTGGCCTGAGTACCACAATACAATTCACTCGCGCAGAAGACAAAATAATGAGCGGTACAGTATCAGTCAATGGTACTGACCTACCGACAACTACATTCCCTTCGCAggg                                  <  2:495175/140‑1 (MQ=255)

                                                                                                          cTGTATTGAATGGTGTTCATCAAGCTGGCCTGAGTACCACAATACAATTCACTCGCGCAGAAGACAAAATAATGAGCGGTACAGTATCAGTCAATGGTACTGACCTACCGACAACTACATTCCCTTCGCAGGGGTTCAcc                           <  2:813152/140‑1 (MQ=255)

                                                                                                            gTATTGAATGGTGTTCATCAAGCTGGCCTGAGTACCACAATACAATTCACTCGCGCAGAAGACAAAATAATGAGCGGTACAGTATCAGTCAATGGTACTGACCTACCGACAACTACATTCCCTTCGCAGGGGTTCACCgg                         <  1:598918/140‑1 (MQ=255)

                                                                                                            gTATTGAATGGTGTTCATCAAGCTGGCCTGAGTACCACAATACAATTCACTCGCGCAGAAGACAAAATAATGAGCGGTACAGTATCAGTCAATGGTACTGACCTACCGACAACTACATTCCCTTCGCAGGGGTTCACCgg                         <  1:157062/140‑1 (MQ=255)

                                                                                                             tATTGAATGGTGTTCATCAAGCTGGCCTGAGTACCACAATACAATTCACTCGCGCAGAAGACAAAATAATGAGCGGTACAGTATCAGTCAATGGTACTGACCTACCGACAACTACATTCCCTTCGCAGGGGTTCACCggg                        <  1:982450/140‑1 (MQ=255)

                                                                                                             tATTGAATGGTGTTCATCAAGCTGGCCTGAGTACCACAATACAATTCACTCGCGCAGAAGACAAAATAATGAGCGGTACAGTATCAGTCAATGGTACTGACCTACCGACAACTACATTCCCTTCGCAGGGGTTCACCggg                        <  1:33880/140‑1 (MQ=255)

                                                                                                               ttGAATGGTGTTCATCAAGCTGGCCTGAGTACCACAATACAATTCACTCGCGCAGAAGACAAAATAATGAGCGGTACAGTATCAGTCAATGGTACTGACCTACCGACAACTACATTCCCTTCGCAGGGGTTCACCGGGGc                      <  2:591843/140‑1 (MQ=255)

                                                                                                                  aaTGGTGTTCATCAAGCTGGCCTGAGTACCACAATACAATTCACTCGCGCAGAAGACAAAATAATGAGCGGTACAGTATCAGTCAATGGTACTGACCTACCGACAACTACATTCCCTTCGCAGGGGTTCAcc                           >  2:755949/1‑132 (MQ=255)

                                                                                                                  aaTGGTGTTCATCAAGCTGGCCTGAGTACCACAATACAATTCACTCGCGCAGAAGACAAAATAATGAGCGGTACAGTATCAGTCAATGGTACTGACCTACCGACAACTACATTCCCTTCGCAGGGGTTCAcc                           <  1:755949/132‑1 (MQ=255)

                                                                                                                  aaTGGTGTTCATCAAGCTGGCCTGAGTACCACAATACAATTCACTCGCGCAGAAGACAAAATAATGAGCGGTACAGTATCAGTCAATGGTACTGACCTACCGACAACTACATTCCCTTCGCAGGGGTTCACCGGGGc                      <  1:351580/137‑1 (MQ=255)

                                                                                                                       tgtTCATCAAGCTGGCCTGAGTACCACAATACAATTCACTCGCGCAGAAGACAAAATAATGAGCGGTACAGTATCAGTCAATGGTACTGACCTACCGACAACTACATTCCCTTCGCAGGGGTTCACCg                          >  1:21100/1‑128 (MQ=255)

                                                                                                                       tgtTCATCAAGCTGGCCTGAGTACCACAATACAATTCACTCGCGCAGAAGACAAAATAATGAGCGGTACAGTATCAGTCAATGGTACTGACCTACCGACAACTACATTCCCTTCGCAGGGGTTCACCg                          <  2:21100/128‑1 (MQ=255)

                                                                                                                       tgtTCATCAAGCTGGCCTGAGTACCACAATACAATTCACTCGCGCAGAAGACAAAATAATGAGCGGTACAGTATCAGTCAATGGTACTGACCTACCGACAACTACATTCCCTTCGCAGGGGTTCACCGGGGCGTATTATc              >  1:673267/1‑140 (MQ=255)

                                                                                                                         ttCATCAAGCTGGCCTGAGTACCACAATACAATTCACTCGCGCAGAAGACAAAATAATGAGCGGTACAGTATTAGTCAATGGTACTGACCTACCGACAACTACATTCCCTTCGCAGGGGTTCACCgg                         <  2:867592/127‑1 (MQ=255)

                                                                                                                         ttCATCAAGCTGGCCTGAGTACCACAATACAATTCACTCGCGCAGAAGACAAAATAATGAGCGGTACAGTATTAGTCAATGGTACTGACCTACCGACAACTACATTCCCTTCGCAGGGGTTCACCgg                         >  1:867592/1‑127 (MQ=255)

                                                                                                                            atcaAGCTGGCCTGAGTACCACAATACAATTCACTCGCGCAGAAGACAAAATAATGAGCGGTACAGTATCAGTCAATGGTACTGACCTACCGACAACTACATTCCCTTCGCAGGGGTTCACCGGGGCGTATTATCAGTTg         >  2:432308/1‑140 (MQ=255)

AACGTGCCCTATATAAAAATTAGCGCAATTGATTACAGTCTAAATATCAACGGTGATTACAAAGCCACTGTTACAGGAGGCGGAGAGGGTATCGCAACGCTGATCCCTGTATTGAATGGTGTTCATCAAGCTGGTCTGAGTACCACAATACAATTCACTCGCGCAGAAGACAAAATAATGAGCGGTACAGTATCAGTCAATGGTACTGACCTACCGACAACTACATTCCCTTCGCAGGGGTTCACCGGGGCGTATTATCAGTTGAATAATG  >  NC_000913/2051256‑2051526

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

N/A