Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A2 F28 I1 R1 155 60.3 2039550 99.3% 2025273 138.7

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 2,055,218 T→C V53A (GTC→GCC)  amn → AMP nucleosidase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,055,2180TC100.0% 236.9 / NA 67V53A (GTC→GCC) amnAMP nucleosidase
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (38/29);  total (38/29)

AGCTCAGGCACTGGATAAACTCGACGCGCTGTATGAGCAATCTGTAGTCGCATTACGCAACGCCATTGGCAACTATATTACAAGTGGCGAATTACCTGATGAAAACGCCCGCAAACAAGGTCTTTTTGTCTATCCATCACTGACCGTAACCTGGGACGGTAGCACAACCAATCCCCCCAAAACGCGCGCATTTGGTCGCTTTACCCACGCAGGCAGCTACACCACCACGATTACTCGCCCTACTCTCTTTCGTTC  >  NC_000913/2055090‑2055344
                                                                                                                                |                                                                                                                              
aGCTCAGGCACTGGATAAACTCGACGCGCTGTATGAGCAATCTGTAGTCGCATTACGCAACGCCATTGGCAACTATATTACAAGTGGCGAATTACCTGATGAAAACGCCCGCAAACAAGGTCTTTTTGCCTATCCATCAc                                                                                                                     >  2:939247/1‑140 (MQ=255)
aGCTCAGGCACTGGATAAACTCGACGCGCTGTATGAGCAATCTGTAGTCGCATTACGCAACGCCATCGGCAACTATATTACAAGTGGCGAATTACCTGATGAAAACGCCCGCAAACAAGGTCTTTTTGCCTATCCATCAc                                                                                                                     <  2:885524/140‑1 (MQ=255)
     aGGCACTGGATAAACTCGACGCGCTGTATGAGCAATCTGTAGTCGCATTACGCAACGCCATTGGCAACTATATTACAAGTGGCGAATTACCTGATGAAAACGCCCGCAAACAAGGTCTTTTTGCCTATCCATCACTGAcc                                                                                                                <  1:769105/140‑1 (MQ=255)
            ggATAAACTCGACGCGCTGTATGAGCAATCTGTAGTCGCATTACGCAACGCCATTGGCAACTATATTACAAGTGGCGAATTACCTGATGAAAACGCCCGCAAACAAGGTCTTTTTGCCTATCCATCACTGACCGTAACCt                                                                                                         >  2:13445/1‑140 (MQ=255)
                       aCGCGCTGTATGAGCAATCTGTAGTCGCATTACGCAACGCCATTGGCAACTATATTACAAGTGGCGAATTACCTGATGAAAACGCCCGCAAACAAGGTCTTTTTGCCTATCCATCACTGACCGTAACCTGGGACGGt                                                                                                 <  1:594376/137‑1 (MQ=255)
                       aCGCGCTGTATGAGCAATCTGTAGTCGCATTACGCAACGCCATTGGCAACTATATTACAAGTGGCGAATTACCTGATGAAAACGCCCGCAAACAAGGTCTTTTTGCCTATCCATCACTGACCGTAACCTGGGACGGt                                                                                                 >  2:594376/1‑137 (MQ=255)
                       aCGCGCTGTATGAGCAATCTGTAGTCGCATTACGCAACGCCATTGGCAACTATATTACAAGTGGCGAATTACCTGATGAAAACGCCCGCAAACAAGGTCTTTTTGCCTATCCATCACTGACCGTAACCTGGGACGGTAGc                                                                                              >  2:797087/1‑140 (MQ=255)
                                       aTCTGTAGTCGCATTACGCAACGCCATTGGCAACTATATTACAAGTGGCGAATTACCTGATGAAAACGCCCGCAAACAAGGTCTTTTTGCCTATCCATCACTGACCGTAACCTGGGACGGTAGCACAACCAATCCCCCCa                                                                              >  1:770930/1‑140 (MQ=255)
                                         cTGTAGTCGCATTACGCAACGCCATTGGCAACTATATTACAAGTGGCGAATTACCTGATGAAAACGCCCGCAAACAAGGTCTTTTTGCCTATCCATCACTGACCGTAACCTGGGACGGTAGCACAACCaa                                                                                      <  1:95358/130‑1 (MQ=255)
                                         cTGTAGTCGCATTACGCAACGCCATTGGCAACTATATTACAAGTGGCGAATTACCTGATGAAAACGCCCGCAAACAAGGTCTTTTTGCCTATCCATCACTGACCGTAACCTGGGACGGTAGCACAACCaa                                                                                      <  1:253193/130‑1 (MQ=255)
                                         cTGTAGTCGCATTACGCAACGCCATTGGCAACTATATTACAAGTGGCGAATTACCTGATGAAAACGCCCGCAAACAAGGTCTTTTTGCCTATCCATCACTGACCGTAACCTGGGACGGTAGCACAACCaa                                                                                      >  2:95358/1‑130 (MQ=255)
                                         cTGTAGTCGCATTACGCAACGCCATTGGCAACTATATTACAAGTGGCGAATTACCTGATGAAAACGCCCGCAAACAAGGTCTTTTTGCCTATCCATCACTGACCGTAACCTGGGACGGTAGCACAACCaa                                                                                      >  2:253193/1‑130 (MQ=255)
                                         cTGTAGTCGCATTACGCAACGCCATTGGCAACTATATTACAAGTGGCGAATTACCTGATGAAAACGCCCGCAAACAAGGTCTTTTTGCCTATCCATCACTGACCGTAACCTGGGACGGTAGCACAACCAATCCCCCCaaa                                                                            >  1:43641/1‑140 (MQ=255)
                                                  cATTACGCAACGCCATTGGCAACTATATTACAAGTGGCGAATTACCTGATGAAAACGCCCGCAAACAAGGTCTTTTTGCCTATCCATCACTGACCGTAACCTGGGACGGTAGCACAACCAATCCCCCCaa                                                                             >  2:11790/1‑130 (MQ=255)
                                                  cATTACGCAACGCCATTGGCAACTATATTACAAGTGGCGAATTACCTGATGAAAACGCCCGCAAACAAGGTCTTTTTGCCTATCCATCACTGACCGTAACCTGGGACGGTAGCACAACCAATCCCCCCaa                                                                             <  1:11790/130‑1 (MQ=255)
                                                  cATTACGCAACGCCATTGGCAACTATATTACAAGTGGCGAATTACCTGATGAAAACGCCCGCAAACAAGGTCTTTTTGCCTATCCATCACTGACCGTAACCTGGGACGGTAGCACAACCAATCCCCCCAAAACGCGCGCa                                                                   >  1:473736/1‑140 (MQ=255)
                                                  cATTACGCAACGCCATTGGCAACTATATTACAAGTGGCGAATTACCTGATGAAAACGCCCGCAAACAAGGTCTTTTTGCCTATCCATCACTGACCGTAACCTGGGACGGTAGCACAACCAATCCCCCCAAAACGCGCGCa                                                                   >  1:891036/1‑140 (MQ=255)
                                                  cATTACGCAACGCCATTGGCAACTATATTACAAGTGGCGAATTACCTGATGAAAACGCCCGCAAACAAGGTCTTTTTGCCTATCCATCACTGACCGTAACCTGGGACGGTAGCACAACCAATCCCCCCAAAACGCGCGCa                                                                   >  1:629356/1‑140 (MQ=255)
                                                    ttACGCAACGCCATTGGCAACTATATTACAAGTGGCGAATTACCTGATGAAAACGCCCGCAAACAAGGTCTTTTTGCCTATCCATCACTGACCGTAACCTGGGACGGTAGCACAACCAATCCCCCCAAAACGCGCGCAtt                                                                 >  2:911252/1‑140 (MQ=255)
                                                      aCGCAACGCCATTGGCAACTATATTACAAGTGGCGAATTACCTGATGAAAACGCCCGCAAACAAGGTCTTTTTGCCTATCCATCACTGACCGTAACCTGGGACGGTAGCACAACCAATCCCCCCAAAACGCGCGCATTTg                                                               <  2:473736/140‑1 (MQ=255)
                                                      aCGCAACGCCATTGGCAACTATATTACAAGTGGCGAATTACCTGATGAAAACGCCCGCAAACAAGGTCTTTTTGCCTATCCATCACTGACCGTAACCTGGGACGGTAGCACAACCAATCCCCCCAAAACGCGCGCATTTg                                                               >  1:389024/1‑140 (MQ=255)
                                                      aCGCAACGCCATTGGCAACTATATTACAAGTGGCGAATTACCTGATGAAAACGCCCGCAAACAAGGTCTTTTTGCCTATCCATCACTGACCGTAACCTGGGACGGTAGCACAACCAATCCCCCCAAAACGCGCGCATTTg                                                               <  2:629356/140‑1 (MQ=255)
                                                      aCGCAACGCCATTGGCAACTATATTACAAGTGGCGAATTACCTGATGAAAACGCCCGCAAACAAGGTCTTTTTGCCTATCCATCACTGACCGTAACCTGGGACGGTAGCACAACCAATCCCCCCAAAACGCGCGCATTTg                                                               >  1:244977/1‑140 (MQ=255)
                                                      aCGCAACGCCATTGGCAACTATATTACAAGTGGCGAATTACCTGATGAAAACGCCCGCAAACAAGGTCTTTTTGCCTATCCATCACTGACCGTAACCTGGGACGGTAGCACAACCAATCCCCCCAAAACGCGCGCATTTg                                                               <  1:867308/140‑1 (MQ=255)
                                                      aCGCAACGCCATTGGCAACTATATTACAAGTGGCGAATTACCTGATGAAAACGCCCGCAAACAAGGTCTTTTTGCCTATCCATCACTGACCGTAACCTGGGACGGTAGCACAACCAATCCCCCCAAAACGCGCGCATTTg                                                               >  1:793708/1‑140 (MQ=255)
                                                        gCAACGCCATTGGCAACTATATTACAAGTGGCGAATTACCTGATGAAAACGCCCGCAAACAAGGTCTTTTTGCCTATCCATCACTGACCGTAACCTGGGACGGTAGCACAACCAATCCCCCCAAAACGCGCGCATTTGGt                                                             <  2:43641/140‑1 (MQ=255)
                                                            cGCCATTGGCAACTATATTACAAGTGGCGAATTACCTGATGAAAACGCCCGCAAACAAGGTCTTTTTGCCTATCCATCACTGACCGTAACCTGGGACGGTAGCACAACCAATCCCCCCAAAACGCGCGCATTTGGTCGCt                                                         >  1:227238/1‑140 (MQ=255)
                                                            cGCCATTGGCAACTATATTACAAGTGGCGAATTACCTGATGAAAACGCCCGCAAACAAGGTCTTTTTGCCTATCCATCACTGACCGTAACCTGGGACGGTAGCACAACCAATCCCCCCAAAACGCGCGCATTTGGTCGCt                                                         >  1:224034/1‑140 (MQ=255)
                                                            cGCCATTGGCAACTATATTACAAGTGGCGAATTACCTGATGAAAACGCCCGCAAACAAGGTCTTTTTGCCTATCCATCACTGACCGTAACCTGGGACGGTAGCACAACCAATCCCCCCAAAACGCGCGCATTTGGTCGCt                                                         >  1:865578/1‑140 (MQ=255)
                                                             gCCATTGGCAACTATATTACAAGTGGCGAATTACCTGATGAAAACGCCCGCAAACAAGGTCTTTTTGCCTATCCATCACTGACCGTAACCTGGGACGGTAGCACAACCAATCCCCCCAAAACGCGCGCATTTGGTCGCtt                                                        >  2:664466/1‑140 (MQ=255)
                                                                 ttGGCAACTATATTACAAGTGGCGAATTACCTGATGAAAACGCCCGCAAACAAGGTCTTTTTGCCTATCCATCACTGACCGTAACCTGGGACGGTAGCACAACCAATCCCCCCAAAACGCGCGCATTTGGTCGCTTTAcc                                                    >  2:675290/1‑140 (MQ=255)
                                                                  tGGCAACTATATTACAAGTGGCGAATTACCTGATGAAAACGCCCGCAAACAAGGTCTTTTTGCCTATCCATCACTGACCGTAACCTGGGACGGTAGCACAACCAATCCCCCCAAAACGCGCGCATTTGGTCGCTTTAccc                                                   <  1:939247/140‑1 (MQ=255)
                                                                     cAACTATATTACAAGTGGCGAATTACCTGATGAAAACGCCCGCAAACAAGGTCTTTTTGCCTATCCATCACTGACCGTAACCTGGGACGGTAGCACAACCAATCCCCCCAAAACGCGCGCATTTGGTCGCTTTACCCACg                                                <  1:797087/140‑1 (MQ=255)
                                                                     cAACTATATTACAAGTGGCGAATTACCTGATGAAAACGCCCGCAAACAAGGTCTTTTTGCCTATCCATCACTGACCGTAACCTGGGACGGTAGCACAACCAATCCCCCCAAAACGCGCGCATTTGGTCGCTTTACCCACg                                                <  2:24255/140‑1 (MQ=255)
                                                                       aCTATATTACAAGTGGCGAATTACCTGATGAAAACGCCCGCAAACAAGGTCTTTTTGCCTATCCATCACTGACCGTAACCTGGGACGGTAGCACAACCAATCCCCCCAAAACGCGCGCATTTGGTCGCTTTACCCACgca                                              <  1:762594/140‑1 (MQ=255)
                                                                        cTATATTACAAGTGGCGAATTACCTGATGAAAACGCCCGCAAACAAGGTCTTTTTGCCTATCCATCACTGACCGTAACCTGGGACGGTAGCACAACCAATCCCCCCAAAACGCGCGCATTTGGTCGCTTTACCCACgcag                                             <  2:793708/140‑1 (MQ=255)
                                                                         tataTTACAAGTGGCGAATTACCTGATGAAAACGCCCGCAAACAAGGTCTTTTTGCCTATCCATCACTGACCGTAACCTGGGACGGTAGCACAACCAATCCCCCCAAAACGCGCGCATTTGGTCGCTTTACCCACgcagg                                            <  2:389024/140‑1 (MQ=255)
                                                                         tataTTACAAGTGGCGAATTACCTGATGAAAACGCCCGCAAACAAGGTCTTTTTGCCTATCCAACACTGACCGTAACCTGGGACGGTAGCACAACCAATCCCCCCAAAACGCGCGCATTTGGTCGCTTTACCCACgcagg                                            >  1:183072/1‑140 (MQ=255)
                                                                          atatTACAAGTGGCGAATTACCTGATGAAAACGCCCGCAAACAAGGTCTTTTTGCCTATCCATCACTGACCGTAACCTGGGACGGTAGCACAACCAATCCCCCCAAAACGCGCGCATTTGGTCGCTTTACCCACgcaggc                                           <  1:389640/140‑1 (MQ=255)
                                                                           tatTACAAGTGGCGAATTACCTGATGAAAACGCCCGCAAACAAGGTCTTTTTGCCTATCCATCACTGACCGTAACCTGGGACGGTAGCACAACCAATCCCCCCAAAACGCGCGCATTTGGTCGCTTTACCCACgcaggca                                          >  2:731715/1‑140 (MQ=255)
                                                                              tACAAGTGGCGAATTACCTGATGAAAACGCCCGCAAACAAGGTCTTTTTGCCTATCCATCACTGACCGTAACCTGGGACGGTAGCACAACCAATCCCCCCAAAACGCGCGCATTTGGTCGCTTTACCCACGCAGGCAGCt                                       >  1:801589/1‑140 (MQ=255)
                                                                                cAAGTGGCGAATTACCTGATGAAAACGCCCGCAAACAAGGTCTTTTTGCCTATCCATCACTGACCGTAACCTGGGACGGTAGCACAACCAATCCCCCCAAAACGCGCGCATTTGGTCGCTTTACCCACgca                                              <  1:856910/131‑1 (MQ=255)
                                                                                cAAGTGGCGAATTACCTGATGAAAACGCCCGCAAACAAGGTCTTTTTGCCTATCCATCACTGACCGTAACCTGGGACGGTAGCACAACCAATCCCCCCAAAACGCGCGCATTTGGTCGCTTTACCCACgca                                              >  2:856910/1‑131 (MQ=255)
                                                                                 aaGTGGCGAATTACCTGATGAAAACGCCCGCAAACAAGGTCTTTTTGCCTATCCATCACTGACCGTAACCTGGGACGGTAGCACAACCAATCCCCCCAAAACGCGCGCATTTGGTCGCTTTACCCACGCAGGCAGCTaca                                    <  1:758794/140‑1 (MQ=255)
                                                                                  aGTGGCGAATTACCTGATGAAAACGCCCGCAAACAAGGTCTTTTTGCCTATCCATCACTGACCGTAACCTGGGACGGTAGCACAACCAATCCCCCCAAAACGCGCGCATTTGGTCGCTTTACCCACGCAGGCAGCTacac                                   >  1:14032/1‑140 (MQ=255)
                                                                                   gTGGCGAATTACCTGATGAAAACGCCCGCAAACAAGGTCTTTTTGCCTATCCATCACTGACCGTAACCTGGGACGGTAGCACAACCAATCCCCCCAAAACGCGCGCATTTGGTCGCTTTACCCACGCAGGCAGCTAcacc                                  >  1:244367/1‑140 (MQ=255)
                                                                                    tGGCGAATTACCTGATGAAAACGCCCGCAAACAAGGTCTTTTTGCCTATCCATCACTGACCGTAACCTGGGACGGTAGCACAACCAATCCCCCCAAAACGCGCGCATTTGGTCGCTTTACCCACGCAGGCAGCTAcacca                                 <  1:317328/140‑1 (MQ=255)
                                                                                     ggCGAATTACCTGATGAAAACGCCCGCAAACAAGGTCTTTTTGCCTATCCATCACTGACCGTAACCTGGGACGGTAGCACAACCAATCCCCCCAAAACGCGCGCATTTGGTCGCTTTACCCACgcag                                             >  1:722035/1‑127 (MQ=255)
                                                                                     ggCGAATTACCTGATGAAAACGCCCGCAAACAAGGTCTTTTTGCCTATCCATCACTGACCGTAACCTGGGACGGTAGCACAACCAATCCCCCCAAAACGCGCGCATTTGGTCGCTTTACCCACgcag                                             <  2:722035/127‑1 (MQ=255)
                                                                                     ggCGAATTACCTGATGAAAACGCCCGCAAACAAGGTCTTTTTGCCTATCCATCACTGACCGTAACCTGGGACGGTAGCACAACCAATCCCCCCAAAACGCGCGCATTTGGTCGCTTTACCCACGCAGGCAGCTAcaccac                                >  2:998160/1‑140 (MQ=255)
                                                                                     ggCGAATTACCTGATGAAAACGCCCGCAAACAAGGTCTTTTTGCCTATCCATCACTGACCGTAACCTGGGACGGTAGCACAACCAATCCCCCCAAAACGCGCGCATTTGGTCGCTTTACCCACGCAGGCAGCTAcaccac                                >  2:326649/1‑140 (MQ=255)
                                                                                     ggCGAATTACCTGATGAAAACGCCCGCAAACAAGGTCTTTTTGCCTATCCATCACTGACCGTAACCTGGGACGGTAGCACAACCAATCCCCCCAAAACGCGCGCATTTGGTCGCTTTACCCACGCAGGCAGCTAcaccac                                >  1:463329/1‑140 (MQ=255)
                                                                                     ggCGAATTACCTGATGAAAACGCCCGCAAACAAGGTCTTTTTGCCTATCCATCACTGACCGTAACCTGGGACGGTAGCACAACCAATCCCCCCAAAACGCGCGCATTTGGTCGCTTTACCCACGCAGGCAGCTAcaccac                                >  2:747252/1‑140 (MQ=255)
                                                                                     ggCGAATTACCTGATGAAAACGCCCGCAAACAAGGTCTTTTTGCCTATCCATCACTGACCGTAACCTGGGACGGTAGCACAACCAATCCCCCCAAAACGCGCGCATTTGGTCGCTTTACCCACGCAGGCAGCTAcaccac                                <  1:731715/140‑1 (MQ=255)
                                                                                     ggCGAATTACCTGATGAAAACGCCCGCAAACAAGGTCTTTTTGCCTATCCATCACTGACCGTAACCTGGGACGGTAGCACAACCAATCCCCCCAAAACGCGCGCATTTGGTCGCTTTACCCACGCAGGCAGCTAcaccac                                >  1:747724/1‑140 (MQ=255)
                                                                                     ggCGAATTACCTGATGAAAACGCCCGCAAACAAGGTCTTTTTGCCTATCCATCACTGACCGTAACCTGGGACGGTAGCACAACCAATCCCCCCAAAACGCGCGCATTTGGTCGCTTTACCCACGCAGGCAGCTAcaccac                                >  2:48867/1‑140 (MQ=255)
                                                                                     ggCGAATTACCTGATGAAAACGCCCGCAAACAAGGACTTTTTGCCTATCCATCACTGACCGTAACCTGGGACGGTAGCACAACCAATCCCCCCAAAACGCGCGCATTTGGTCGCTTTACCCACGCAGGCAGCTAcaccac                                >  1:233376/1‑140 (MQ=255)
                                                                                       cGAATTACCTGATGAAAACGCCCGCAAACAAGGTCTTTTTGCCTATCCATCACTGACCGTAACCTGGGACGGTAGCACAACCAATCCCCCCAAAACGCGCGCATTTGGTCGCTTTACCCACGCAGGCAGCTAcaccacca                              >  1:566521/1‑140 (MQ=255)
                                                                                       cGAATTACCTGATGAAAACGCCCGCAAACAAGGTCTTTTTGCCTATCCATCACTGACCGTAACCTGGGACGGTAGCACAACCAATCCCCCCAAAACGCGCGCATTTGGTCGCTTTACCCACGCAGGCAGCTAcaccacca                              >  1:370077/1‑140 (MQ=255)
                                                                                         aaTTACCTGATGAAAACGCCCGCAAACAAGGTCTTTTTGCCTATCCATCACTGACCGTAACCTGGGACGGTAGCACAACCAATCCCCCCAAAACGCGCGCATTTGGTCGCTTTACCCACGCAGGCAGCTACACCACCACg                            <  1:48867/140‑1 (MQ=255)
                                                                                              ccTGATGAAAACGCCCGCAAACAAGGTCTTTTTGCCTATCCATCACTGACCGTAACCTGGGACGGTAGCACAACCAATCCCCCCAAAACGCGCGCATTTGGTCGCTTTACCCACGCAGGCAGCTACACCACCACGATTAc                       <  2:566521/140‑1 (MQ=255)
                                                                                              ccTGATGAAAACGCCCGCAAACAAGGTCTTTTTGCCTATCCATCACTGACCGTAACCTGGGACGGTAGCACAACCAATCCCCCCAAAACGCGCGCATTTGGTCGCTTTACCCACGCAGGCAGCTACACCACCACGATTAc                       <  2:227238/140‑1 (MQ=255)
                                                                                                   tgaAAACGCCCGCAAACAAGGTCTTTTTGCCTATCCATCACTGACCGTAACCTGGGACGGTAGCACAACCAATCCCCCCAAAACGCGCGCATTTGGTCGCTTTACCCACGCAGGCAGCTACACCACCACGATTACTCGcc                  >  2:957048/1‑140 (MQ=255)
                                                                                                     aaaaCGCCCGCAAACAAGGTCTTTTTGCCTATCCATCACTGACCGTAACCTGGGACGGTAGCACAACCAATCCCCCCAAAACGCGCGCATTTGGTCGCTTTACCCACGCAGGCAGCTACACCACCACGATTACTCGCCCt                <  2:244367/140‑1 (MQ=255)
                                                                                                             cGCAAACAAGGTCTTTTTGCCTATCCATCACTGACCGTAACCTGGGACGGTAGCACAACCAATCCCCCCAAAACGCGCGCATTTGGTCGCTTTACCCACGCAGGCAGCTACACCACCACGATTACTCGCCCTACTCTCtt        <  2:463329/140‑1 (MQ=255)
                                                                                                                  aCAAGGTCTTTTTGCCTATCCATCACTGACCGTAACCTGGGACGGTAGCACAACCAATCCCCCCAAAACGCGCGCATTTGGTCGCTTTACCCACGCAGGCAGCTACACCACCACGATTACTCGCCCTACTCTCTttcgtt   <  1:747252/140‑1 (MQ=255)
                                                                                                                   cAAGGTCTTTTTGCCTATCCATCACTGACCGTAACCTGGGACGGTAGCACAACCAATCCCCCCAAAACGCGCGCATTTGGTCGCTTTACCCACGCAGGCAGCTACACCACCACGATTACTCGCCCTACTCTCTttcgttc  <  1:957048/140‑1 (MQ=255)
                                                                                                                                |                                                                                                                              
AGCTCAGGCACTGGATAAACTCGACGCGCTGTATGAGCAATCTGTAGTCGCATTACGCAACGCCATTGGCAACTATATTACAAGTGGCGAATTACCTGATGAAAACGCCCGCAAACAAGGTCTTTTTGTCTATCCATCACTGACCGTAACCTGGGACGGTAGCACAACCAATCCCCCCAAAACGCGCGCATTTGGTCGCTTTACCCACGCAGGCAGCTACACCACCACGATTACTCGCCCTACTCTCTTTCGTTC  >  NC_000913/2055090‑2055344

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A