Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A2 F28 I1 R1	155	60.3	2039550	99.3%	2025273	138.7

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,208,721	T→C	V252A (GTG→GCG)	yehP →	VWA domain‑containing protein YehP

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,208,721	0	T	C	100.0%	260.5 / NA	73	V252A (GTG→GCG)	yehP	VWA domain‑containing protein YehP
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (33/40); total (33/40)

CCGCATTAAACGCCAAAGCGAACAATGGCAACTGGTCTTACTGGTTGATCAAAGCGGATCGATGGTCGATTCGGTGATCCACTCTGCGGTGATGGCGGCCTGTTTGTGGCAGTTACCCGGCATTCGTACCCATCTGGTGGCGTTTGACACAAGCGTCGTTGATCTCACGGCAGACGTTGCCGATCCGGTAGAGTTATTAATGAAAGTACAGTTGGGCGGCGGGACCAATATCGCCAGTGCCGTGGAGTATGGTCGGCAACTTATTGAACAAC  >  NC_000913/2208584‑2208855

ccGCATTAAACGCCAAAGCGAACAATGGCAACTGGTCTTACTGGTTGATCAAAGCGGATCGATGGTCGATTCGGTGATCCACTCTGCGGTGATGGCGGCCTGTTTGTGGCAGTTACCCGGCATTCGTACCCATCtggcgg                                                                                                                                      >  2:601212/1‑140 (MQ=255)

 cGCATTAAACGCCAAAGCGAACAATGGCAACTGGTCTTACTGGTTGATCAAAGCGGATCGATGGTCGATTCGGTGATCCACTCTGCGGTGATGGCGGCCTGTTTGTGGCAGTTACCCGGCATTCGTACCCATCTggcggc                                                                                                                                     >  2:531069/1‑140 (MQ=255)

    aTTAAACGCCAAAGCGAACAATGGCAACTGGTCTTACTGGTTGATCAAAGCGGATCGATGGTCGATTCGGTGATCCACTCTGCGGTGATGGCGGCCTGTTTGTGGCAGTTACCCGGCATTCGTACCCATCTGGCGGCGtt                                                                                                                                  <  2:934423/140‑1 (MQ=255)

             cAAAGCGAACAATGGCAACTGGTCTTACTGGTTGATCAAAGCGGATCGATGGTCGATTCGGTGATCCACTCTGCGGTGATGGCGGCCTGTTTGTGGCAGTTACCCGGCATTCGTACCCATCTGGCGGCGTTTGACACAAg                                                                                                                         >  2:336085/1‑140 (MQ=255)

             cAAAGCGAACAATGGCAACTGGTCTTACTGGTTGATCAAAGCGGATCGATGGTCGATTCGGTGATCCACTCTGCGGTGATGGCGGCCTGTTTGTGGCAGTTACCCGGCATTCGTACCCATCTGGCGGCGTTTGACACAAg                                                                                                                         <  1:890718/140‑1 (MQ=255)

             cAAAGCGAACAATGGCAACTGGTCTTACTGGTTGATCAAAGCGGATCGATGGTCGATTCGGTGATCCACTCTGCGGTGATGGCGGCCTGTTTGTGGCAGTTACCCGGCATTCGTACCCATCTGGCGGCGTTTGACACAAg                                                                                                                         >  2:890718/1‑140 (MQ=255)

             cAAAGCGAACAATGGCAACTGGTCTTACTGGTTGATCAAAGCGGATCGATGGTCGATTCGGTGATCCACTCTGCGGTGATGGCGGCCTGTTTGTGGCAGTTACCCGGCATTCATACCCATCTGGCGGCGTTTGACACAAg                                                                                                                         <  2:830132/140‑1 (MQ=255)

               aaGCGAACAATGGCAACTGGTCTTACTGGTTGATCAAAGCGGATCGATGGTCGATTCGGTGATCCACTCTGCGGTGATGGCGGCCTGTTTGTGGCAGTTACCCGGCATTCGTACCCATCTGGCGGCGTTTGACACAAGcg                                                                                                                       <  1:753444/140‑1 (MQ=255)

                aGCGAACAATGGCAACTGGTCTTACTGGTTGATCAAAGCGGATCGATGGTCGATTCGGTGATCCACTCTGCGGTGATGGCGGCCTGTTTGTGGCAGTTACCCGGCATTCGTACCCATCTGGCGGCGTTTGACACAAGcgt                                                                                                                      >  2:472891/1‑140 (MQ=255)

                     aCAATGGCAACTGGTCTTACTGGTTGATCAAAGCGGATCGATGGTCGATTCGGTGATCCACTCTGCGGTGATGGCGGCCTGTTTGTGGCAGTTACCCGGCATTCGTACCCATCTGGCGGCGttt                                                                                                                                 <  2:760962/124‑1 (MQ=255)

                     aCAATGGCAACTGGTCTTACTGGTTGATCAAAGCGGATCGATGGTCGATTCGGTGATCCACTCTGCGGTGATGGCGGCCTGTTTGTGGCAGTTACCCGGCATTCGTACCCATCTGGCGGCGttt                                                                                                                                 >  1:760962/1‑124 (MQ=255)

                            cAACTGGTCTTACTGGTTGATCAAAGCGGATCGATGGTCGATTCGGTGATCCACTCTGCGGTGATGGCGGCCTGTTTGTGGCAGTTACCCGGCATTCGTACCCATCTGGCGGCGTTTGACACAAGCGTCGTTGAtctcgc                                                                                                          >  1:371870/1‑138 (MQ=255)

                            cAACTGGTCTTACTGGTTGATCAAAGCGGATCGATGGTCGATTCGGTGATCCACTCTGCGGTGATGGCGGCCTGTTTGTGGCAGTTACCCGGCATTCGTACCCATCTGGCGGCGTTTGACACAAGCGTCGTTGATCTCAc                                                                                                          >  2:1013531/1‑140 (MQ=255)

                              aCTGGTCTTACTGGTTGATCAAAGCGGATCGATGGTCGATTCGGTGATCCACTCTGCGGTGATGGCGGCCTGTTTGTGGCAGTTACCCGGCATTCGTACCCATCTGGCGGCGTTTGACACAAGCGTCGTTGATCTCACgg                                                                                                        <  2:346360/140‑1 (MQ=255)

                                 ggTCTTACTGGTTGATCAAAGCGGATCGATGGTCGATTCGGTGATCCACTCTGCGGTGATGGCGGCCTGTTTGTGGCAGTTACCCGGCATTCGTACCCATCTGGCGGCGTTTGACACAAGCGTCGTTGATCTCACGGCAg                                                                                                     >  2:541223/1‑140 (MQ=255)

                                 ggTCTTACTGGTTGATCAAAGCGGATCGATGGTCGATTCGGTGATCCACTCTGCGGTGATGGCGGCCTGTTTGTGGCAGTTACCCGGCATTCGTACCCATCTGGCGGCGTTTGACACAAGCGTCGTTGATCTCACGGCAg                                                                                                     >  2:770419/1‑140 (MQ=255)

                                  gTCTTACTGGTTGATCAAAGCGGATCGATGGTCGATTCGGTGATCCACTCTGCGGTGATGGCGGCCTGTTTGTGGCAGTTACCCGGCATTCGTACCCATCTGGCGGCGTTTGACACAAGCGTCGTTGATCTCACGGCAGa                                                                                                    <  2:389114/140‑1 (MQ=255)

                                   tCTTACTGGTTGATCAAAGCGGATCGATGGTCGATTCGGTGATCCACTCTGCGGTGATGGCGGCCTGTTTGTGGCAGTTACCCGGCATTCGTACCCATCTGGCGGCGTTTGACACAAGCGTCGTTGATCTCACGGCAGAc                                                                                                   >  1:4243/1‑140 (MQ=255)

                                    cTTACTGGTTGATCAAAGCGGATCGATGGTCGATTCGGTGATCCACTCTGCGGTGATGGCGGCCTGTTTGTGGCAGTTACCCGGCATTCGTACCCATCTGGCGGCGTTTGACACAAGCGTCGTTGATCTCACGGCAGACg                                                                                                  >  2:683843/1‑140 (MQ=255)

                                        cTGGTTGATCAAAGCGGATCGATGGTCGATTCGGTGATCCACTCTGCGGTGATGGCGGCCTGTTTGTGGCAGTTACCCGGCATTCGTACCCATCTGGCGGCGTTTGACACAAGCGTCGTCGATCTCACGGCAGACGTTGc                                                                                              <  1:760490/140‑1 (MQ=255)

                                          ggTTGATCAAAGCGGATCGATGGTCGATTCGGTGATCCACTCTGCGGTGATGGCGGCCTGTTTGTGGCAGTTACCCGGCATTCGTACCCATCTGGCGGCGTTTGACACAAGCGTCGTTGATCTCACGGCAGACGTTGCCg                                                                                            <  2:254080/140‑1 (MQ=255)

                                            ttGATCAAAGCGGATCGATGGTCGATTCGGTGATCCACTCTGCGGTGATGGCGGCCTGTTTGTGGCAGTTACCCGGCATTCGTACCCATCTGGCGGCGTTTGACACAAGCGTCGTTGATCTCACGGCAGACGTTGCCGAt                                                                                          >  2:354771/1‑140 (MQ=255)

                                            ttGATCAAAGCGGATCGATGGTCGATTCGGTGATCCACTCTGCGGTGATGGCGGCCTGTTTGTGGCAGTTACCCGGCATTCGTACCCATCTGGCGGCGTTTGACACAAGCGTCGTTGATCTCACGGCAGACGTTGCCGAt                                                                                          >  1:568675/1‑140 (MQ=255)

                                             tGATCAAAGCGGATCGATGGTCGATTCGGTGATCCACTCTGCGGTGATGGCGGCCTGTTTGTGGCAGTTACCCGGCATTCGTACCCATCTGGCGGCGTTTGACACAAGCGTCGTTGATCTCGCGGCAGACGTTGCCGATc                                                                                         <  2:371870/140‑1 (MQ=255)

                                             tGATCAAAGCGGATCGATGGTCGATTCGGTGATCCACTCTGCGGTGATGGCGGCCTGTTTGTGGCAGTTACCCGGCATTCGTACCCATCTGGCGGCGTTTGACACAAGCGTCGTTGATCTCACGGCAGACGTTGc                                                                                              >  2:922983/1‑135 (MQ=255)

                                             tGATCAAAGCGGATCGATGGTCGATTCGGTGATCCACTCTGCGGTGATGGCGGCCTGTTTGTGGCAGTTACCCGGCATTCGTACCCATCTGGCGGCGTTTGACACAAGCGTCGTTGATCTCACGGCAGACGTTGc                                                                                              <  1:922983/135‑1 (MQ=255)

                                              gATCAAAGCGGATCGATGGTCGATTCGGTGATCCACTCTGCGGTGATGGCGGCCTGTTTGTGGCAGTTACCCGGCATTCGTACCCATCTGGCGGCGTTTGACACAAGCGTCGTTGATCTCACGGCAGACGTTGCCGATcc                                                                                        >  1:155583/1‑140 (MQ=255)

                                                  aaaGCGGATCGATGGTCGATTCGGTGATCCACTCTGCGGTGATGGCGGCCTGTTTGTGGCAGTTACCCGGCATTCGTACCCATCTGGCGGCGTTTGACACAAGCGTCGTTGATCTCACGGCAGACGTTGCCGATCCGGTa                                                                                    <  2:155583/140‑1 (MQ=255)

                                                  aaaGCGGATCGATGGTCGATTCGGTGATCCACTCTGCGGTGATGGCGGCCTGTTTGTGGCAGTTACCCGGCATTCGTACCCATCTGGCGGCGTTTGACACAAGCGTCGTTGATCTCACGGCAGACGTTGCCGATCCGGTa                                                                                    >  1:905009/1‑140 (MQ=255)

                                                   aaGCGGATCGATGGTCGATTCGGTGATCCACTCTGCGGTGATGGCGGCCTGTTTGTGGCAGTTACCCGGCATTCGTACCCATCTGGCGGCGTTTGACACAAGCGTCGTTGATCTCACGGCAGACGTTGc                                                                                              <  2:528116/129‑1 (MQ=255)

                                                   aaGCGGATCGATGGTCGATTCGGTGATCCACTCTGCGGTGATGGCGGCCTGTTTGTGGCAGTTACCCGGCATTCGTACCCATCTGGCGGCGTTTGACACAAGCGTCGTTGATCTCACGGCAGACGTTGc                                                                                              >  1:528116/1‑129 (MQ=255)

                                                     gCGGATCGATGGTCGATTCGGTGATCCACTCTGCGGTGATGGCGGCCTGTTTGTGGCAGTTACCCGGCATTCGTACCCATCTGGCGGCGTTTGACACAAGCGTCGTTGATCTCACGGTAGACGTTGCCGATCCGGTagag                                                                                 >  1:720866/1‑140 (MQ=255)

                                                     gCGGATCGATGGTCGATTCGGTGATCCACTCTGCGGTGATGGCGGCCTGTTTGTGGCAGTTACCCGGCATTCGTACCCATCTGGCGGCGTTTGACACAAGCGTCGTTGATCTCACGGCAGACGTTGCCGATCCGGTagag                                                                                 <  1:336085/140‑1 (MQ=255)

                                                         aTCGATGGTCGATTCGGTGATCCACTCTGCGGTGATGGCGGCCTGTTTGTGGCAGTTACCCGGCATTCGTACCCATCTGGCGGCGTTTGACACAAGCGTCGTTGATCTCACGGCAGACGTTGCCGATCCGGTAGAGttat                                                                             >  2:241905/1‑140 (MQ=255)

                                                          tCGATGGTCGATTCGGTGATCCACTCTGCGGTGATGGCGGCCTGTTTGTGGCAGTTACCCGGCATTCGTACCCATCTGGCGGCGTTTGACACAAGCGTCGTTGATCTCACGGCAGACGTTGCCGATCCGGTAGAGttatt                                                                            <  2:905009/140‑1 (MQ=255)

                                                             aTGGTCGATTCGGTGATCCACTCTGCGGTGATGGCGGCCTGTTTGTGGCAGTTACCCGGCATTCGTACCCATCTGGCGGCGTTTGACACAAGCGTCGTTGATCTCACGGCAGACGTTGCCGATCCGGTAGAGTTATTAAt                                                                         <  1:821008/140‑1 (MQ=255)

                                                             aTGGTCGATTCGGTGATCCACTCTGCGGTGATGGCGGCCTGTTTGTGGCAGTTACCCGGCATTCGTACCCATCTGGCGGCGTTTGACACAAGCGTCGTTGATCTCACGGCAGACGTTGCCGATCCGGTAGAGTTATTAAt                                                                         <  1:149933/140‑1 (MQ=255)

                                                              tGGTCGATTCGGTGATCCACTCTGCGGTGATGGCGGCCTGTTTGTGGCAGTTACCCGGCATTCGTACCCATCTGGCGGCGTTTGACACAAGCGTCGTTGATCTCACGGCAGACGTTGCCGATCCGGTAGAGttatt                                                                            >  1:563337/1‑136 (MQ=255)

                                                              tGGTCGATTCGGTGATCCACTCTGCGGTGATGGCGGCCTGTTTGTGGCAGTTACCCGGCATTCGTACCCATCTGGCGGCGTTTGACACAAGCGTCGTTGATCTCACGGCAGACGTTGCCGATCCGGTAGAGttatt                                                                            <  2:563337/136‑1 (MQ=255)

                                                                               cACTCTGCGGTGATGGCGGCCTGTTTGTGGCAGTTACCCGGCATTCGTACCCATCTGGCGGCGTTTGACACAAGCGTCGTTGATCTCACGGCAGACGTTGCCGATCCGGTAGAGTTATTAATGAAAGTACAGTTGggcgg                                                       >  2:699052/1‑140 (MQ=255)

                                                                               cACTCTGCGGTGATGGCGGCCTGTTTGTGGCAGTTACCCGGCATTCGTACCCATCTGGCGGCGTTTGACACAAGCGTCGTTGATCTCACGGCAGACGTTGCCGATCCGGTAGAGTTATTAATGAAAGTACAGTTGggcgg                                                       >  1:406201/1‑140 (MQ=255)

                                                                               cACTCTGCGGTGATGGCGGCCTGTTTGTGGCAGTTACCCGGCATTCGTACCCATCTGGCGGCGTTTGACACAAGCGTCGTTGATCTCACGGCAGACGTTGCCGATCCGGTAGAGTTATTAATGAAAGTACAGTTGggcgg                                                       >  2:799719/1‑140 (MQ=255)

                                                                                 ctctGCGGTGATGGCGGCCTGTTTGTGGCAGTTACCCGGCATTCGTACCCATCTGGCGGCGTTTGACACAAGCGTCGTTGATCTCACGGCAGACGTTGCCGATCCGGTAGAGTTATTAATGAAAGTACAGTTGGgcggcg                                                     >  2:517448/1‑140 (MQ=255)

                                                                                   ctGCGGTGATGGCGGCCTGTTTGTGGCAGTTACCCGGCATTCGTACCCATCTGGCGGCGTTTGACACAAGCGTCGTTGATCTCACGGCAGACGTTGCCGATCCGGTAGAGTTATTAATGAAAGTACAGTTGGGCGGCggg                                                   <  1:354771/140‑1 (MQ=255)

                                                                                    tGCGGTGATGGCGGCCTGTTTGTGGCAGTTACCCGGCATTCGTACCCATCTGGCGGCGTTTGACACAAGCGTCGTTGATCTCACGGCAGACGTTGCCGATCCGGTAGAGTTATTAATGAAAGTACAGTTGGGCGGCGGGa                                                  <  1:683843/140‑1 (MQ=255)

                                                                                    tGCGGTGATGGCGGCCTGTTTGTGGCAGTTACCCGGCATTCGTACCCATCTGGCGGCGTTTGACACAAGCGTCGTTGATCTCACGGCAGACGTTGCCGATCCGGTAGAGTTATTAATGAAAGTACAGTTGGGCGGCGGGa                                                  <  1:699052/140‑1 (MQ=255)

                                                                                    tGCGGTGATGGCGGCCTGTTTGTGGCAGTTACCCGGCATTCGTACCCATCTGGCGGCGTTTGACACAAGCGTCGTTGATCTCACGGCAGACGTTGCCGATCCGGTAGAGTTATTAATGAAAGTACAGTTGGGCGGCGGGa                                                  <  2:406201/140‑1 (MQ=255)

                                                                                      cGGTGATGGCGGCCTGTTTGTGGCAGTTACCCGGCATTCGTACCCATCTGGCGGCGTTTGACACAAGCGTCGTTGATCTCACGGCAGACGTTGCCGATCCGGTAGAGTTATTAATGAAAGTACAGTTGGGCGGCGGGAcc                                                >  1:611795/1‑140 (MQ=255)

                                                                                      cGGTGATGGCGGCCTGTTTGTGGCAGTTACCCGGCATTCGTACCCATCTGGCGGCGTTTGACACAAGCGTCGTTGATCTCACGGCAGACGTTGCCGATCCGGTAGAGTTATTAATGAAAGTACAGTTGGGCGGCGGGAcc                                                <  2:568675/140‑1 (MQ=255)

                                                                                            tGGCGGCCTGTTTGTGGCAGTTACCCGGCATTCGTACCCATCTGGCGGCGTTTGACACAAGCGTCGTTGATCTCACGGCAGACGTTGCCGATCCGGTAGAGTTATTAATGAAAGTACAGTTGGGCGGCGGGACCAATATc                                          >  2:781258/1‑140 (MQ=255)

                                                                                              gcggcCTGTTTGTGGCAGTTACCCGGCATTCGTACCCCTCTGGCGGCGTTTGACACAAGCGTCGTTGATCTCACGGCAGACGTTGCCGATCCGGCAGAGGTATTAATGAAAGCACAGTTGGGCGGCGGGGCCAATATCGc                                        >  2:845651/1‑140 (MQ=255)

                                                                                              gcggcCTGTTTGTGGCAGTTACCCGGCATTCGTACCCATCTGGCGGCGTTTGACACAAGCGTCGTTGATCTCACGGCAGACGTTGCCGATCCGGTAGAGTTATTAATGAAAGTACAGTTGGGCGGCGGGACCAATATCGc                                        <  1:424474/140‑1 (MQ=255)

                                                                                                ggcCTGTTTGTGGCAGTTACCCGGCATTCGTACCCATCTGGCGGCGTTTGACACAAGCGTCGTTGATCTCACGGCAGACGTTGCCGATCCGGGAGAGGTATTTATGAAAGGACAGTTGGGCGGCGGGGCCAATATCGccc                                      >  2:57077/1‑139 (MQ=255)

                                                                                                  ccTGTTTGTGGCAGTTACCCGGCATTCGTACCCATCTGGCGGCGTTTGACACAAGCGTCGTTGATCTCACGGCAGACGTTGCCGATCCGGTAGAGTTATTAATGAAAGTACAGTTGGGCGGCGGGACCAATATCGCCAGt                                    >  2:308632/1‑140 (MQ=255)

                                                                                                     gTTTGTGGCAGTTACCCGGCATTCGTTCCCATCTGGCGGCGTTTGACACAAGCGTCGTTGATCTCACGGCAGACGTTGCCGATCCGGTAGAGTTATTAATGAAAGTACAGTTGGGCGGCGGGACCAATATCGCCAGTgtc                                 <  1:400932/140‑3 (MQ=255)

                                                                                                     gTTTGTGGCAGTTACCCGGCATTCGTACCCATCTGGCGGCGTTTGACACAAGCGTCGTTGATCTCACGGCAGACGTTGCCGATCCGGTAGAGTTATTAATGAAAGTACAGTTGGGCGGCGGGACCAATATCGCCAGTGcc                                 <  1:517448/140‑1 (MQ=255)

                                                                                                      tttGTGGCAGTTACCCGGCATTCGTACCCATCTGGCTGCGTTTGACACAAGCGTCGTTGATCTCACGGCAGACGTTGCCGATCCGGTAGAGTTATTAATGAAAGTACAGTTGGGCGGCGGGACCAATATCGCCAGTGCCg                                <  2:751027/140‑1 (MQ=255)

                                                                                                      tttGTGGCAGTTACCCGGCATTCGTACCCATCTGGCGGCGTTTGACACAAGCGTCGTTGATCTCACGGCAGACGTTGCCGATCCGGTAGAGTTATTAATGAAAGTACAGTTGGGCGGCGGGACCAATATCGCCAGTGCCg                                <  1:781258/140‑1 (MQ=255)

                                                                                                      tttGTGGCAGTTACCCGGCATTCGTACCCATCTGGCGGCGTTTGACACAAGCGTCGTTGATCTCACGGCAGACGTTGCCGATCCGGTAGAGTTATTAATGAAAGTACAGTTGGGCGGCGGGACCAATATCGCCAGTGCCg                                <  1:531069/140‑1 (MQ=255)

                                                                                                      tttGTGGCAGTTACCCGGCATTCGTACCCATCTGGCGGCGTTTGACACAAGCGTCGTTGATCTCACGGCAGACGTTGCCGATCCGGTAGAGTTATTAATGAAAGTACAGTTGGGCGGCGGGACCAATATCGCCAGTGCCg                                <  1:308632/140‑1 (MQ=255)

                                                                                                      tttGTGGCAGTTACCCGGCATTCGTACCCATCTGGCGGCGTTTGACACAAGCGTCGTTGATCTCACGGCAGACGTTGCCGATCCGGTAGAGTTATTAATGAAAGTACAGTTGGGCGGCGGGACCAATATCGCCAGTGCCg                                <  1:1013531/140‑1 (MQ=255)

                                                                                                       ttGTGGCAGTTACCCGGCATTCGTACCCATCTGGCGGCGTTTGACACAAGCGTCGTTGATCTCACGGCAGACGTTGCCGATCCGGTAGAGTTATTAATGAAAGTACAGTTGGGCGGCGGGACCAATATCGCCAGTGCCGt                               >  1:336148/1‑140 (MQ=255)

                                                                                                          tgGCAGTTACCCGGCATTCGTACCCATCTGGCGGCGTTTGACACAAGCGTCGTTGATCTCACGGCAGACGTTGCCGATCCGGTAGAGTTATTAATGAAAGTACAGTTGGGCGGCGGGACCAATATCGCCAGTGCCGTGGa                            <  1:601212/140‑1 (MQ=255)

                                                                                                                ttACCCGGCATTCGTACCCATCTGGCGGCGTTTGACACAAGCGTCGTTGATCTCACGGCAGACGTTGCCGATCCGGTAGAGTTATTAATGAAAGTACAGTTGGGCGGCGGGACCAATATCGCCAGTGCCGTGGAGTATgg                      >  1:584498/1‑140 (MQ=255)

                                                                                                                  aCCCGGCATTCGTACCCATCTGGCGGCGTTTGACACAAGCGTCGTTGATCTCACGGCAGACGTTGCCGATCCGGTAGAGTTATTAATGAAAGTACAGTTGGGCGGCGGGACCAATATCGCCAGTGCCGTGGAGTATGGTc                    >  2:971178/1‑140 (MQ=255)

                                                                                                                   cccGGCATTCGTACCCATCTGGCGGCGTTTGACACAAGCGTCGTTGATCTCACGGCAGACGTTGCCGATCCGGTAGAGTTATTAATGAAAGTACAGTTGGGCGGCGGGACCAATATCGCCAGTGCCGTGGAGTATGGTCg                   <  2:4243/140‑1 (MQ=255)

                                                                                                                    ccGGCATTCGTACCCATCTGGCGGCGTTTGACACAAGCGTCGTTGATCTCACGGCAGACGTTGCCGATCCGGTAGAGTTATTAATGAAAGTACAGTTGGGCGGCGGGACCAATATCGCCAGTGCCGTGGAGTATGGTCgg                  <  2:744011/140‑1 (MQ=255)

                                                                                                                     cGGCATTCGTACCCATCTGGCGGCGTTTGACACAAGCGTCGTTGATCTCACGGCAGACGTTGCCGATCCGGTAGAGTTATTAATGAAAGTACAGTTGGGCGGCGGGACCAATATCGCCAGTGCCGTGGAGTATGGTCGGc                 <  1:92977/140‑1 (MQ=255)

                                                                                                                      ggCATTCGTACCCATCTGGCGGCGTTTGACACAAGCGTCGTTGATCTCACGGCAGACGTTGCCGATCCGGTAGAGTTATTAATGAAAGTACAGTTGGGCGGCGGGACCAATATCGCCAGTGCCGTGGAGTATGGTCGGCa                <  2:720866/140‑1 (MQ=255)

                                                                                                                      ggCATTCGTACCCATCTGGCGGCGTTTGACACAAGCGTCGTTGATCTCACGGCAGACGTTGCCGATCCGGTAGAGTTATTAATGAAAGTACAGTTGGGCGGCGGGACCAATATCGCCAGTGCCGTGGAGTATGGTCGGCa                <  2:36777/140‑1 (MQ=255)

                                                                                                                       gCATTCGTACCCATCTGGCGGCGTTTGACACAAGCGTCGTTGATCTCACGGCAGACGTTGCCGATCCGGTAGAGTTATTAATGAAAGTACAGTTGGGCGGCGGGACCAATATCGCCAGTGCCGTGGAGTATGGTCGGCaa               >  2:383965/1‑140 (MQ=255)

                                                                                                                        cATTCGTACCCATCTGGCGGCGTTTGACACAAGCGTCGTTGATCTCACGGCAGACGTTGCCGATCCGGTAGAGTTATTAATGAAAGTACAGTTGGGCGGCGGGACCAATATCGCCAGTGCCGTGGAGTATGGTCGGCAAc              <  1:472891/140‑1 (MQ=255)

                                                                                                                             gTACCCATCTGGCGGCGTTTGACACAAGCGTCGTTGATCTCACGGCAGACGTTGCCGATCCGGTAGAGTTATTAATGAAAGTACAGTTGGGCGGCGGGACCAATATCGCCAGTGCCGTGGAGTATGGTCGGCAACTTAtt         >  1:504981/1‑140 (MQ=255)

                                                                                                                                 ccATCTGGCGGCGTTTGACACAAGCGTCGTTGATCTCACGGCAGACGTTGCCGATCCGGTAGAGTTATTAATGAAAGTACAGTTGGGCGGCGGGACCAATATCGCCAGTGCCGTGGAGTATGGTCGGCAACTTATTGaac     <  1:541223/140‑1 (MQ=255)

                                                                                                                                 ccATCTGGCGGCGTTTGACACAAGCGTCGTTGATCTCACGGCAGACGTTGCCGATCCGGTAGAGTTATTAATGAAAGTACAGTTGGGCGGCGGGACCAATATCGCCAGTGCCGTGGAGTATGGTCGGCAACTTATTGaac     <  1:383965/140‑1 (MQ=255)

                                                                                                                                  cATCTGGCGGCGTTTGACACAAGCGTCGTTGATCTCACGGCAGACGTTGCCGATCCGGTAGAGTTATTAATGAAAGTACAGTTGGGCGGCGGGACCAATATCGCCAGTGCCGTGGAGTATGGTCGGCAACTTATTGaaca    >  1:138690/1‑140 (MQ=255)

                                                                                                                                    tCTGGCGGCGTTTGACACAAGCGTCGTTGATCTCACGGCAGACGTTGCCGATCCGGTAGAGTTATTAATGAAAGTACAGTTGGGCGGCGGGACCAATATCGCCAGTGCCGTGGAGTATGGTCGGCAACTTATTGaacaac  >  2:865962/1‑140 (MQ=255)

CCGCATTAAACGCCAAAGCGAACAATGGCAACTGGTCTTACTGGTTGATCAAAGCGGATCGATGGTCGATTCGGTGATCCACTCTGCGGTGATGGCGGCCTGTTTGTGGCAGTTACCCGGCATTCGTACCCATCTGGTGGCGTTTGACACAAGCGTCGTTGATCTCACGGCAGACGTTGCCGATCCGGTAGAGTTATTAATGAAAGTACAGTTGGGCGGCGGGACCAATATCGCCAGTGCCGTGGAGTATGGTCGGCAACTTATTGAACAAC  >  NC_000913/2208584‑2208855

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

N/A