Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A4 F28 I1 R1	159	82.1	2830106	99.3%	2810295	139.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,210,908	G→A	W603* (TGG→TGA)	yehQ →	SWIM zinc finger domains‑containing protein YehQ

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,210,908	0	G	A	100.0%	233.1 / NA	66	W603* (TGG→TGA)	yehQ	SWIM zinc finger domains‑containing protein YehQ
Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (37/29); total (37/29)

CGTGCCTGGGCGCTGGACGCAGAAACTACGCCTGTGGCACCGCTACCTTCTGCCAGCGTTTTGCCTGTGCCGTCTACTGCTCATCAGTTGCTGATACGCTGCCAGGCGTTACTTATTCAACTGCTCCATAACGGCTGGCGCTATCAGGAACAGAGTGCTATTGGTCAGGCATAGTTGCTGGCGAATGACCTCACCGCGGTGGGTTTTTATCGGCTGGCACATGTGTTGGGACAATTTCGTAATACAGAAAGCGAGGCACGGGTAGAAGCAATGA  >  NC_000913/2210771‑2211044

cGTGCCTGGGCGCTGGACGCAGAAACTACGCCTGTGGCACCGCTACCTTCTGCCAGCGTTTTGCCTGTGCCGTCTACTGCTCATCAGTTGCTGATACGCTGCCAGGCGTTACTTATTCAACTGCTCCATAACGGCTGacg                                                                                                                                        <  2:1175802/140‑1 (MQ=255)

  tGCCTGGGCGCTGGACGCAGAAACTACGCCTGTGGCACCGCTACCTTCTGCCAGCGTTTTGCCTGTGCCGTCTACTGCTCATCAGTTGCTGATACGCTGCCAGGCGTTACTTATTCAACTGCTCCATAACGGCTGacgca                                                                                                                                      >  2:801770/1‑139 (MQ=255)

  tGCCTGGGCGCTGGACGCAGAAACTACGCCTGTGGCACCGCTACCTTCTGCCAGCGTTTTGCCTGTGCCGTCTACTGCTCATCAGTTGCTGATACGCTGCCAGGCGTTACTTATTCAACTGCTCCATAACGGCTGACGCt                                                                                                                                      >  1:889122/1‑140 (MQ=255)

          cgcTGGACGCAGAAACTACGCCTGTGGCACCGCTACCTTCTGCCAGCGTTTTGCCTGTGCCGTCTACTGCTCATCAGTTGCTGATACGCTGCCAGGCGTTACTTATTCAACTGCTCCATAACGGCTGACGCTATCAGGaa                                                                                                                              <  2:445762/140‑1 (MQ=255)

          cgcTGGACGCAGAAACTACGCCTGTGGCACCGCTACCTTCTGCCAGCGTTTTGCCTGTGCCGTCTACTGCTCATCAGTTGCTGATACGCTGCCAGGCGTTACTTATTCAACTGCTCCATAACGGCTGACGCTATCAGGaa                                                                                                                              <  1:418021/140‑1 (MQ=255)

          cgcTGGACGCAGAAACTACGCCTGTGGCACCGCTACCTTCTGCCAGCGTTTTGCCTGTGCCGTCTACTGCTCATCAGTTGCTGATACGCTGCCAGGCGTTACTTATTCAACTGCTCCATAACGGCTGACGCTATCAGGaa                                                                                                                              >  2:820255/1‑140 (MQ=255)

          cgcTGGACGCAGAAACTACGCCTGTGGCACCGCTACCTTCTGCCAGCGTTTTGCCTGTGCCGTCTACTGCTCATCAGTTGCTGATACGCTGCCAGGCGTTACTTATTCAACTGCTCCATAACGGCTGACGCTATCAGGaa                                                                                                                              <  2:34020/140‑1 (MQ=255)

          cgcTGGACGCAGAAACTACGCCTGTGGCACCGCTACCTTCTGCCAGCGTTTTGCCTGTGCCGTCTACTGCTCATCAGTTGCTGATACGCTGCCAGGCGTTACTTATTCAACTGCTCCATAACGGCTGACGCTATCAGGaa                                                                                                                              <  2:1136222/140‑1 (MQ=255)

               gACGCAGAAACTACGCCTGTGGCACCGCTACCTTCTGCCAGCGTTTTGCCTGTGCCGTCTACTGCTCATCAGTTGCTGATACGCTGCCAGGCGTTACTTATTCAACTGCTCCATAACGGCTGACGCTATCAGGAACagag                                                                                                                         <  1:820255/140‑1 (MQ=255)

               gACGCAGAAACTACGCCTGTGGCACCGCTACCTTCTGCCAGCGTTTTGCCTGTGCCGTCTACTGCTCATCAGTTGCTGATACGCTGCCAGGCGTTACTTATTCAACTGCTCCATAACGGCTGACGCTATCAGGAACagag                                                                                                                         <  1:220240/140‑1 (MQ=255)

                    aGAAACTACGCCTGTGGCACCGCTACCTTCTGCCAGCGTTTTGCCTGTGCCGTCTACTGCTCATCAGTTGCTGATACGCTGCCAGGCGTTACTTATTCAACTGCTCCATAACGGCTGACGCTATCAGGAACAGAGTGCTa                                                                                                                    <  1:127376/140‑1 (MQ=255)

                        aCTACGCCTGTGGCACCGCTACCTTCTGCCAGCGTTTTGCCTGTGCCGTCTACTGCTCATCAGTTGCTGATACGCTGCCAGGCGTTACTTATTCAACTGCTCCATAACGGCTGACGCTATCAGGAACAGAGTGCTATTgg                                                                                                                <  1:597538/140‑1 (MQ=255)

                          tACGCCTGTGGCACCGCTACCTTCTGCCAGCGTTTTGCCTGTGCCGTCTACTGCTCATCAGTTGCTGATACGCTGCCAGGCGTTACTTATTCAACTGCTCCATAACGGCTGACGCTATCAGGAACAGAGTGCTATTGGTc                                                                                                              <  1:959701/140‑1 (MQ=255)

                              ccTGTGGCACCGCTACCTTCTGCCAGCGTTTTGCCTGTGCCGTCTACTGCTCATCAGTTGCTGATACGCTGCCAGGCGTTACTTATTCAACTGCTCCATAACGGCTGACGCTATCAGGAACAGAGTGCTATTGGTCAGGc                                                                                                          >  2:472833/1‑140 (MQ=255)

                              ccTGTGGCACCGCTACCTTCTGCCAGCGTTTTGCCTGTGCCGTCTACTGCTCATCAGTTGCTGATACGCTGCCAGGCGTTACTTATTCAACTGCTCCATAACGGCTGACGCTATCAGGAACAGAGTGCTATTGGTCAGGc                                                                                                          >  1:290653/1‑140 (MQ=255)

                               cTGTGGCACCGCTACCTTCTGCCAGCGTTTTGCCTGTGCCGTCTACTGCTCATCAGTTGCTGATACGCTGCCAGGCGTTACTTATTCAACTGCTCCATAACGGCTGACGCTATCAGGAACAGAGTGCTATTGGTCAGGCa                                                                                                         <  2:1009884/140‑1 (MQ=255)

                                  tgGCACCGCTACCTTCTGCCAGCGTTTTGCCTGTGCCGTCTACTGCTCATCAGTTGCTGATACGCTGCCAGGCGTTACTTATTCAACTGCTCCATAACGGCTGACGCTATCAGGAACAGAGTGCTAt                                                                                                                   <  2:1130871/127‑1 (MQ=255)

                                  tgGCACCGCTACCTTCTGCCAGCGTTTTGCCTGTGCCGTCTACTGCTCATCAGTTGCTGATACGCTGCCAGGCGTTACTTATTCAACTGCTCCATAACGGCTGACGCTATCAGGAACAGAGTGCTAt                                                                                                                   >  1:1130871/1‑127 (MQ=255)

                                  tgGCACCGCTACCTTCTGCCAGCGTTTTGCCTGTGCCGTCTACTGCTCATCAGTTGCTGATACGCTGCCAGGCGTTACTTATTCAACTGCTCCATAACGGCTGACGCTATCAGGAACAGAGTGCTATTGGTCAGGCATAg                                                                                                      >  2:1063306/1‑140 (MQ=255)

                                  tgGCACCGCTACCTTCTGCCAGCGTTTTGCCTGTGCCGTCTACTGCTCATCAGTTGCTGATACGCTGCCAGGCGTTACTTATTCAACTGCTCCATAACGGCTGACGCTATCAGGAACAGAGTGCTATTGGTCAGGCATAg                                                                                                      >  2:1371919/1‑140 (MQ=255)

                                    gCACCGCTACCTTCTGCCAGCGTTTTGCCTGTGCCGTCTACTGCTCATCAGTTGCTGATACGCTGCCAGGCGTTACTTATTCAACTGCTCCATAACGGCTGACGCTATCAGGAACAGAGTGCTATTGGTCAGGCATAGtt                                                                                                    >  2:757148/1‑140 (MQ=255)

                                       ccGCTACCTTCTGCCAGCGTTTTGCCTGTGCCGTCTACTGCTCATCAGTTGCTGATACGCTGCCAGGCGTTACTTATTCAACTGCTCCATAACGGCTGACGCTATCAGGAACAGAGTGCTATTGGTCAGGCATAGTTGCt                                                                                                 <  1:872603/140‑1 (MQ=255)

                                         gCTACCTTCTGCCAGCGTTTTGCCTGTGCCGTCTACTGCTCATCAGTTGCTGATACGCTGCCAGGCGTTACTTATTCAACTGCTCCATAACGGCTGACGCTATCAGGAACAGAGTGCTATTGGTCAGGCATAGTTGCt                                                                                                 <  2:1288548/138‑1 (MQ=255)

                                         gCTACCTTCTGCCAGCGTTTTGCCTGTGCCGTCTACTGCTCATCAGTTGCTGATACGCTGCCAGGCGTTACTTATTCAACTGCTCCATAACGGCTGACGCTATCAGGAACAGAGTGCTATTGGTCAGGCATAGTTGCt                                                                                                 >  1:1288548/1‑138 (MQ=255)

                                            aCCTTCTGCCAGCGTTTTGCCTGTGCCGTCTACTGCTCATCAGTTGCTGATACGCTGCCAGGCGTTACTTATTCAACTGCTCCATAACGGCTGACGCTATCAGGAACAGAGTGCTATTGGTCAGGCATAGTTGCTGGCGa                                                                                            >  2:83474/1‑140 (MQ=255)

                                               ttCTGCCAGCGTTTTGCCTGTGCCGTCTACTGCTCATCAGTTGCTGATACGCTGCCAGGCGTTACTTATTCAACTGCTCCATAACGGCTGACGCTATCAGGAACAGAGTGCTATTGGTCAGGCATAGTTGCTGGCGAATg                                                                                         >  1:834065/1‑140 (MQ=255)

                                                       gCGTTTTGCCTGTGCCGTCTACTGCTCATCAGTTGCTGATACGCTGCCAGGCGTTACTTATTCAACTGCTCCATAACGGCTGACGCTATCAGGAACAGAGTGCTATTGGTCAGGCATAGTTGCTGGCGAATGACCTCAcc                                                                                 >  1:632459/1‑140 (MQ=255)

                                                       gCGTTTTGCCTGTGCCGTCTACTGCTCATCAGTTGCTGATACGCTGCCAGGCGTTACTTATTCAACTGCTCCATAACGGCTGACGCTATCAGGAACAGAGTGCTATTGGTCAGGCATAGTTGCTGGCGAATGACCTCAcc                                                                                 <  2:15562/140‑1 (MQ=255)

                                                        cGTTTTGCCTGTGCCGTCTACTGCTCATCAGTTGCTGATACGCTGCCAGGCGTTACTTATTCAACTGCTCCATAACGGCTGACGCTATCAGGAACAGAGTGCTATTGGTCAGGCATAGTTGCTGGCGAATGACCTCACcg                                                                                >  2:603423/1‑140 (MQ=255)

                                                            ttGCCTGTGCCGTCTACTGCTCATCAGTTGCTGATACGCTGCCAGGCGTTACTTATTCAACTGCTCCATAACGGCTGACGCTATCAGGAACAGAGTGCTATTGGTCAGGCATAGTTGCTGGCGAATGACCTCACCGCGGt                                                                            <  1:1371919/140‑1 (MQ=255)

                                                                      cGTCTACTGCTCATCAGTTGCTGATACGCTGCCAGGCGTTACTTATTCAACTGCTCCATAACGGCTGACGCTATCAGGAACAGAGTGCTATTGGTCAGGCATAGTTGCTGGCGAATGACCTCACCGCGGTGGGTTTTTAt                                                                  <  1:641084/140‑1 (MQ=255)

                                                                      cGTCTACTGCTCATCAGTTGCTGATACGCTGCCAGGCGTTACTTATTCAACTGCTCCATAACGGCTGACGCTATCAGGAACAGAGTGCTATTGGTCAGGCATAGTTGCTGGCGAATGACCTCACCGCGGTGGGTTTTTAt                                                                  <  1:831189/140‑1 (MQ=255)

                                                                        tCTACTGCTCATCAGTTGCTGATACGCTGCCAGGCGTTACTTATTCAACTGCTCCATAACGGCTGACGCTATCAGGAACAGAGTGCTATTGGTCAGGCATAGTTGCTGGCGAATGACCTCACCGCGGTGGGTTTTTATCg                                                                >  1:1404091/1‑140 (MQ=255)

                                                                         cTACTGCTCATCAGTTGCTGATACGCTGCCAGGCGTTACTTATTCAACTGCTCCATAACGGCTGACGCTATCAGGAACAGAGTGCTATTGGTCAGGCATAGTTGCTGGCGAATGACCTCACCGCGGTGGGTTTTTATCgg                                                               <  2:889122/140‑1 (MQ=255)

                                                                             tGCTCATCAGTTGCTGATACGCTGCCAGGCGTTACTTATTCAACTGCTCCATAACGGCTGACGCTATCAGGAACAGAGTGCTATTGGTCAGGCATAGTTGCTGGCGAATGACCTCACCGCGGTGGGTTTTTATCGGCTgg                                                           <  1:222969/140‑1 (MQ=255)

                                                                               cTCATCAGTTGCTGATACGCTGCCAGGCGTTACTTATTCAACTGCTCCATAACGGCTGACGCTATCAGGAACAGAGTGCTATTGGTCAGGCATAGTTGCTGGCGAATGACCTCACCGCGGTGGGTTTTTATCGGCTggga                                                         >  2:607430/1‑138 (MQ=255)

                                                                               cTCATCAGTTGCTGATACGCTGCCAGGCGTTACTTATTCAACTGCTCCATAACGGCTGACGCTATCAGGAACAGAGTGCTATTGGTCAGGCATAGTTGCTGGCGAATGACCTCACCGCGGTGGGTTTTTATCGGCTGGca                                                         >  2:643093/1‑140 (MQ=255)

                                                                                 catcaGTTGCTGATACGCTGCCAGGCGTTACTTATTCAACTGCTCCATAACGGCTGACGCTATCAGGAACAGAGTGCTATTGGTCAGGCATAGTTGCTGGCGAATGACCTCACCGCGGTGGGTTTTTATCGGCTGGcaca                                                       <  2:632459/140‑1 (MQ=255)

                                                                                  atcaGTTGCTGATACGCTGCCAGGCGTTACTTATTCAACTGCTCCATAACGGCTGACGCTATCAGGAACAGAGTGCTATTGGTCAGGCATAGTTGCTGGCGAATGACCTCACCGCGGTGGGTTTTTATCGGCTGGCACAt                                                      >  2:326715/1‑140 (MQ=255)

                                                                                  atcaGTTGCTGATACGCTGCCAGGCGTTACTTATTCAACTGCTCCATAACGGCTGACGCTATCAGGAACAGAGTGCTATTGGTCAGGCATAGTTGCTGGCGAATGACCTCACCGCGGTGGGTTTTTATCGGCTGGCACAt                                                      <  1:451326/140‑1 (MQ=255)

                                                                                  atcaGTTGCTGATACGCTGCCAGGCGTTACTTATTCAACTGCTCCATAACGGCTGACGCTATCAGGAACAGAGTGCTATTGGTCAGGCATAGTTGCTGGCGAATGACCTCACCGCGGTGGGTTTTTATCGGCTGGCACAt                                                      >  1:14977/1‑140 (MQ=255)

                                                                                      gTTGCTGATACGCTGCCAGGCGTTACTTATTCAACTGCTCCATAACGGCTGACGCTATCAGGAACAGAGTGCTATTGGTCAGGCATAGTTGCTGGCGAATGGCCTCCCCGCGGTGGGTTTTTATCGGCTGGCACAtgtgg                                                  <  2:833225/140‑2 (MQ=255)

                                                                                         gCTGATACGCTGCCAGGCGTTACTTATTCAACTGCTCCATAACGGCTGACGCTATCAGGAACAGAGTGCTATTGGTCAGGCATAGTTGCTGGCGAATGACCTCACCGCGGTGGGTTTTTATCGGCTGGCACATGTGTTgg                                               >  1:107953/1‑140 (MQ=255)

                                                                                         gCTGATACGCTGCCAGGCGTTACTTATTCAACTGCTCCATAACGGCTGACGCTATCAGGAACAGAGTGCTATTGGTCAGGCATAGTTGCTGGCGAATGACCTCACCGCGGTGGGTTTTTATCGGCTGGCACATGTGTTgg                                               >  1:745593/1‑140 (MQ=255)

                                                                                         gCTGATACGCTGCCAGGCGTTACTTATTCAACTGCTCCATAACGGCTGACGCTATCAGGAACAGAGTGCTATTGGTCAGGCATAGTTGCTGGCGAATGACCTCACCGCGGTGGGTTTTTATCGGCTGGCACATGTGTTgg                                               >  1:833557/1‑140 (MQ=255)

                                                                                           tGATACGCTGCCAGGCGTTACTTATTCAACTGCTCCATAACGGCTGACGCTATCAGGAACAGAGTGCTATTGGTCAGGCATAGTTGCTGGCGAATGACCTCACCGCGGTGGGTTTTTATCGGCTGGCACATGTGTTGGGa                                             <  1:792219/140‑1 (MQ=255)

                                                                                              tACGCTGCCAGGCGTTACTTATTCAACTGCTCCATAACGGCTGACGCTATCAGGAACAGAGTGCTATTGGTCAGGCATAGTTGCTGGCGAATGACCTCACCGCGGTGGGTTTTTATCGGCTGGCACATGTGTTGGGACaa                                          <  2:107953/140‑1 (MQ=255)

                                                                                              tACGCTGCCAGGCGTTACTTATTCAACTGCTCCATAACGGCTGACGCTATCAGGAACAGAGTGCTATTGGTCAGGCATAGTTGCTGGCGAATGACCTCACCGCGGTGGGTTTTTATCGGCTGGCACATGTGTTGGGACaa                                          <  2:290653/140‑1 (MQ=255)

                                                                                                     ccAGGCGTTACTTATTCAACTGCTCCATAACGGCTGACGCTATCAGGAACAGAGTGCTATTGGTCAGGCATAGTTGCTGGCGAATGACCTCACCGCGGTGGGTTTTTATCGGCTGGCACATGTGTTGGGACAATTTCGTa                                   <  2:268829/140‑1 (MQ=255)

                                                                                                             tACTTATTCAACTGCTCCATAACGGCTGACGCTATCAGGAACAGAGTGCTATTGGTCAGGCATAGTTGCTGGCGAATGACCTCACCGCGGTGGGTTTTTATCGGCTGGCACATGTGTTGGGACAATTTCGTAATACAGaa                           >  2:954676/1‑140 (MQ=255)

                                                                                                             tACTTATTCAACTGCTCCATAACGGCTGACGCTATCAGGAACAGAGTGCTATTGGTCAGGCATAGTTGCTGGCGAATGACCTCACCGCGGTGGGTTTTTATCGGCTGGCACATGTGTTGGGACAATTTCGTAATACAGaa                           >  2:1404060/1‑140 (MQ=255)

                                                                                                                    tCAACTGCTCCATAACGGCTGACGCTATCAGGAACAGAGTGCTATTGGTCAGGCATAGTTGCTGGCGAATGACCTCACCGCGGTGGGTTTTTATCGGCTGGCACATGTGTTGGGACAATTTCGTAATACAGAAAGCGAgg                    >  2:1067995/1‑140 (MQ=255)

                                                                                                                    tCAACTGCTCCATAACGGCTGACGCTATCAGGAACAGAGTGCTATTGGTCAGGCATAGTTGCTGGCGAATGACCTCACCGCGGTGGGTTTTTATCGGCTGGCACATGTGTTGGGACAATTTCGTAATACAGAAAGCGAgg                    >  1:55980/1‑140 (MQ=255)

                                                                                                                    tCAACTGCTCCATAACGGCTGACGCTATCAGGAACAGAGTGCTATTGGTCAGGCATAGTTGCTGGCGAATGACCTCACCGCGGTGGGTTTTTATCGGCTGGCACATGTGTTGGGACAATTTCGTAATACAGAAAGCGAgg                    <  1:603423/140‑1 (MQ=255)

                                                                                                                      aaCTGCTCCATAACGGCTGACGCTATCAGGAACAGAGTGCTATTGGTCAGGCATAGTTGCTGGCGAATGACCTCACCGCGGTGGGTTTTTATCGGCTGGCACATGTGTTGGGACAATTTCGTAATACAGAAAGCGAGGCa                  <  1:757148/140‑1 (MQ=255)

                                                                                                                        cTGCTCCATAACGGCTGACGCTATCAGGAACAGAGTGCTATTGGTCAGGCATAGTTGCTGGCGAATGACCTCACCGCGGTGGGTTTTTATCGGCTGGCACATGTGTTGGGACAATTTCGTAATACAGAAAGCGAGGCa                  >  2:148781/1‑138 (MQ=255)

                                                                                                                        cTGCTCCATAACGGCTGACGCTATCAGGAACAGAGTGCTATTGGTCAGGCATAGTTGCTGGCGAATGACCTCACCGCGGTGGGTTTTTATCGGCTGGCACATGTGTTGGGACAATTTCGTAATACAGAAAGCGAGGCa                  <  1:148781/138‑1 (MQ=255)

                                                                                                                        cTGCTCCATAACGGCTGACGCTATCAGGAACAGAGTGCTATTGGTCAGGCATAGTTGCTGGCGAATGACCTCACCGCGGTGGGTTTTTATCGGCTGGCACATGTGTTGGGACAATTTCGTAATACAGAAAGCGAGGCACg                >  1:652253/1‑140 (MQ=255)

                                                                                                                        cTGCTCCATAACGGCTGACGCTATCAGGAACAGAGTGCTATTGGTCAGGCATAGTTGCTGGCGAATGACCTCACCGCGGTGGGTTTTTATCGGCTGGCACATGTGTTGGGACAATTTCGTAATACAGAAAGCGAGGCACg                >  2:9704/1‑140 (MQ=255)

                                                                                                                         tGCTCCATAACGGCTGACGCTATCAGGAACAGAGTGCTATTGGTCAGGCATAGTTGCTGGCGAATGACCTCACCGCGGTGGGTTTTTATCGGCTGGCACATGTGTTGGGACAATTTCGTAATACAGAAAGCGAGGCACgg               >  2:355980/1‑140 (MQ=255)

                                                                                                                          gCTCCATAACGGCTGACGCTATCAGGAACAGAGTGCTATTGGTCAGGCATAGTTGCTGGCGAATGACCTCACCGCGGTGGGTTTTTATCGGCTGGCACATGTGTTGGGACAATTTCGTAATACAGAAAGCGAGGCACggg              >  1:91310/1‑140 (MQ=255)

                                                                                                                          gCTCCATAACGGCTGACGCTATCAGGAACAGAGTGCTATTGGTCAGGCATAGTTGCTGGCGAATGACCTCACCGCGGTGGGTTTTTATCGGCTGGCACATGTGTTGGGACAATTTCGTAATACAGAAAGCGAGGCACggg              >  1:422196/1‑140 (MQ=255)

                                                                                                                          gCTCCATAACGGCTGACGCTATCAGGAACAGAGTGCTATTGGTCAGGCATAGTTGCTGGCGAATGACCTCACCGCGGCGGGTTTTTATCGGCTGGCTCATGTGCTGGGGGAATTTCGTAATACAGAAAGCGAAGCACggg              >  2:1020977/1‑140 (MQ=255)

                                                                                                                           cTCCATAACGGCTGACGCTATCAGGAACAGAGTGCTATTGGTCAGGCATAGTTGCTGGCGAATGACCTCACCGCGGTGGGTTTTTATCGGCTGGCACATGTGTTGGGACAATTTCGTAATACAGAAAGCGAGGCACgggg             >  1:289805/1‑139 (MQ=255)

                                                                                                                              cATAACGGCTGACGCTATCAGGAACAGAGTGCTATTGGTCAGGCATAGTTGCTGGCGAATGACCTCACCGCGGTGGGTTTTTATCGGCTGGCACATGTGTTGGGACAATTTCGTAATACAGAAAGCGAGGCACGGGTAGa          >  1:263460/1‑140 (MQ=255)

                                                                                                                                tAACGGCTGACGCTATCAGGAACAGAGTGCTATTGGTCAGGCATAGTTGCTGGCGAATGACCTCACCGCGGTGGGTTTTTATCGGCTGGCACATGTGTTGGGACAATTTCGTAATACAGAAAGCGAGGCACGGGTAGAAg        >  1:844272/1‑140 (MQ=255)

                                                                                                                                tAACGGCTGACGCTATCAGGAACAGAGTGCTATTGGTCAGGCATAGTTGCTGGCGAATGACCTCACCGCGGTGGGTTTTTATCGGCTGGCACATGTGTTGGGACAATTTCGTAATACAGAAAGCGAGGCACGGGTAGAAg        <  1:1067995/140‑1 (MQ=255)

                                                                                                                                     gCTGACGCTATCAGGAACAGAGTGCTATTGGTCAGGCATAGTTGCTGGCGAATGACCTCACCGCGGTGGGTTTTTATCGGCTGGCACATGTGTTGGGACAATTTCGTAATACAGAAAGCGAGGCACGGGTAGAAGCAATg   >  1:136405/1‑140 (MQ=255)

                                                                                                                                      cTGACGCTATCAGGAACAGAGTGCTATTGGTCAGGCATAGTTGCTGGCGAATGACCTCACCGCGGTGGGTTTTTATCGGCTGGCACATGTGTTGGGACAATTTCGTAATACAGAAAGCGAGGCACGGGTAGAAGCAATGa  >  1:1144712/1‑140 (MQ=255)

CGTGCCTGGGCGCTGGACGCAGAAACTACGCCTGTGGCACCGCTACCTTCTGCCAGCGTTTTGCCTGTGCCGTCTACTGCTCATCAGTTGCTGATACGCTGCCAGGCGTTACTTATTCAACTGCTCCATAACGGCTGGCGCTATCAGGAACAGAGTGCTATTGGTCAGGCATAGTTGCTGGCGAATGACCTCACCGCGGTGGGTTTTTATCGGCTGGCACATGTGTTGGGACAATTTCGTAATACAGAAAGCGAGGCACGGGTAGAAGCAATGA  >  NC_000913/2210771‑2211044

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

N/A