Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A2 F28 I1 R1
|
155 |
60.3 |
2039550 |
99.3% |
2025273 |
138.7 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,905,639 |
(A)9→10 |
intergenic (‑42/+92) |
bglF ← / ← bglG |
beta‑glucoside specific PTS enzyme II/BglG kinase/BglG phosphatase/transcriptional antiterminator BglG |
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,905,630 | 1 | . | A | 95.0%
| 204.7
/ 2.5
| 60 | intergenic (‑33/+101) | bglF/bglG | beta‑glucoside specific PTS enzyme II/BglG kinase/BglG phosphatase/transcriptional antiterminator BglG |
| Reads supporting (aligned to +/- strand): ref base . (2/1); new base A (24/33); total (26/34) |
| Fisher's exact test for biased strand distribution p-value = 5.74e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.94e-01 |
TTTCATCCTTTAATTTAAAACGTAATCGCGTTGCGCAATGCATCAGACTCACAATGTTATCTGCGCCCCCGACTCCTGCGACTATTTTTCTGGCTAACTCCGTCATAACTTGCCCTCTACCGCTTTGCGGCAAAACTCC‑‑AAAAAAAAACCTGAAAAAAACGGCCTGACGTGAATCAAGCAATTTTTTTCAGGTTTTGCCCGCTTAGTGCGGTAACAATCCTTTACTCAGTAATAATATTTCAGTGTTCTTTGCGCACGCGCTCTATA > NC_000913/3905492‑3905758
|
tttCATCCTTTAATTTAAAACGTAATCGCGTTGCGCAATGCATCAGACTCACAATGTTATCTGCGCCCCCGACTCCTGCGACTATTTTTCTGGCTAACTCCGTCATAACTTGCCCTCTACCGCTTTGCGGCAAAACTCC‑‑a < 2:759509/140‑1 (MQ=255)
aaaaCGTAATCGCGTTGCGCAATGCATCAGACTCACAATGTTATCTGCGCCCCCGACTCCTGCGACTATTTTTCTGGCTAACTCCGTCATAACTTGCCCTCTACCGCTTTGCGGCAAAACTCCA‑AAAAAAAAACCTGaaa > 1:499335/1‑140 (MQ=255)
aaaaCGTAATCGCGTTGCGCAATGCATCAGACTCACAATGTTATCTGCGCCCCCGACTCCTGCGACTATTTTTCTGGCTAACTCCGTCATAACTTGCCCTCTACCGCTTTGCGGCAAAACTCCA‑AAAAAAAAACCTGaaa > 1:572577/1‑140 (MQ=255)
aTCGCGTTGCGCAATGCATCAGACTCACAATGTTATCTGCGCCCCCGACTCCTGCGACTATTTTTCTGGCTAACTCCGTCATAACTTGCCCTCTACCGCTTTGCGGCAAAACTCCAAAAAAAAAAACCTGAAAAAAACgg > 1:790670/1‑140 (MQ=255)
aTCGCGTTGCGCAATGCATCAGACTCACAATGTTATCTGCGCCCCCGACTCCTGCGACTATTTTTCTGGCTAACTCCGTCATAACTTGCCCTCTACCGCTTTGCGGCAAAACTCCA‑AAAAAAAAACCTGAAAAAAACGGc < 1:130341/140‑1 (MQ=255)
aTCGCGTTGCGCAATGCATCAGACTCACAATGTTATCTGCGCCCCCGACTCCTGCGACTATTTTTCTGGCTAACTCCGTCATAACTTGCCCTCTACCGCTTTGCGGCAAAACTCCA‑AAAAAAAAACCTGAAAAAAACGGc > 2:59171/1‑140 (MQ=255)
tCGCGTTGCGCAATGCATCAGACTCACAATGTTATCTGCGCCCCCGACTCCTGCGACTATTTTTCTGGCTAACTCCGTCATAACTTGCCCTCTACCGCTTTGCGGCAAAACTCCA‑AAAAAAAAACCTGAAAAAAACGGcc < 1:728176/140‑1 (MQ=255)
ttGCGCAATGCATCAGACTCACAATGTTATCTGCGCCCCCGACTCCTGCGACTATTTTTCTGGCTAACTCCGTCATAACTTGCCCTCTACCGCTTTGCGGCAAAACTCCA‑AAAAAAAAACCTGAAAAAAACGGCCTGACg > 1:723412/1‑140 (MQ=255)
ttGCGCAATGCATCAGACTCACAATGTTATCTGCGCCCCCGACTCCTGCGACTATTTTTCTAGCTAACTCCGTCATAACTTGCCCTCTACCGCTTTGCGGCAAAACTCCA‑AAAAAAAAACCTGAAAAAAACGGCCTGACg > 2:910948/1‑140 (MQ=255)
gcAATGCATCAGACTCACAATGTTATCTGCGCCCCCGACTCCTGCGACTATTTTTCTGGCTAACTCCGTCATAACTTGCCCTCTACCGCTTTGCGGCAAAACTCCA‑AAAAAAAAACCTGAAAAAAACGGCCTGACGTGaa < 2:197532/140‑1 (MQ=255)
tGCATCAGACTCACAATGTTATCTGCGCCCCCGACTCCTGCGACTATTTTTCTGGCTAACTCCGTCATAACTTGCCCTCTACCGCTTTGCGGCAAAACTCCA‑AAAAAAAAACCTGAAAAAAACGGCCTGACGTGAATCaa > 2:90899/1‑140 (MQ=255)
aTCAGACTCACAATGTTATCTGCGCCCCCGACTCCTGCGACTATTTTTCTGGCTAACTCCGTCATAACTTGCCCTCTACCGCTTTGCGGCAAAACTCCA‑AAAAAAAAACCTGAAAAAAACGGCCTGACGTGAATCAAGCa > 2:533838/1‑140 (MQ=255)
tCAGACTCACAATGTTATCTGCGCCCCCGACTCCTGCGACTATTTTTCTGGCTAACTCCGTCATAACTTGCCCTCTACCGCTTTGCGGCAAAACTCCA‑AAAAAAAAACCTGAAAAAAACGGCCTGACGTGAATCAAGCaa < 1:837742/140‑1 (MQ=255)
cacaATGTTATCTGCGCCCCCGACTCCTGCGACTATTTTTCTGGCTAACTCCGTCATAACTTGCCCTCTACCGCTTTGCGGCAAAACTCCA‑AAAAAAAAACCTGAAAAAAACGGCCTGACGTGAATCAAGCAAttttttt < 2:943539/140‑1 (MQ=255)
acaATGTTATCTGCGCCCCCGACTCCTGCGACTATTTTTCTGGCTAACTCCGTCATAACTTGCCCTCTACCGCTTTGCGGCAAAACTCCA‑AAAAAAAAACCTGAAAAAAACGTCCTGACGTGAATTAAGCAATTTTTTTc > 2:909158/1‑140 (MQ=255)
acaATGTTATCTGCGCCCCCGACTCCTGCGACTATTTTTCTGGCTAACTCCGTCATAACTTGCCCTCTACCGCTTTGCGGCAAAACTCCA‑AAAAAAAAACCTGAAAAAAACGGCCTGACGTGAATCAAGCAATTTTTTTc < 2:100435/140‑1 (MQ=255)
acaATGTTATCTGCGCCCCCGACTCCTGCGACTATTTTTCTGGCTAACTCCGTCATAACTTGCCCTCTACCGCTTTGCGGCAAAACTCCA‑AAAAAAAAACCTGAAAAAAACGGCCTGACGTGAATCAAGCAATTTTTTTc > 1:824929/1‑140 (MQ=255)
tGTTATCTGCGCCCCCGACTCCTGCGACTATTTTTCTGGCTAACTCCGTCATAACTTGCCCTCTACCGCTTTGCGGCAAAACTCCA‑AAAAAAAAACCTGAAAAAAACGGCCTGACGTGAATCAAGCAATTTTTTTCAGGt < 2:682194/140‑1 (MQ=255)
ttATCTGCGCCCCCGACTCCTGCGACTATTTTTCTGGCTAACTCCGTCATAACTTGCCCTCTACCGCTTTGCGGCAAAACTCCA‑AAAAAAAAACCTGAAAAAAACGGCCTGACGTGAATCAAGCAATTTTTTTCAGGttt > 1:846644/1‑140 (MQ=255)
aTCTGCGCCCCCGACTCCTGCGACTATTTTTCTGGCTAACTCCGTCATAACTTGCCCTCTACCGCTTTGCGGCAAAACTCCA‑AAAAAAAAACCTGAAAAAAACGGCCTGACGTGAATCAAGCAATTTTTTTCAGGTTTTg > 1:553994/1‑140 (MQ=255)
aTCTGCGCCCCCGACTCCTGCGACTATTTTTCTGGCTAACTCCGTCATAACTTGCCCTCTACCGCTTTGCGGCAAAACTCCA‑AAAAAAAAACCTGAAAAAAACGGCCTGACGTGAATCAAGCAATTTTTTTCAGGTTTTg < 1:910948/140‑1 (MQ=255)
ccccGACTCCTGCGACTATTTTTCTGGCTAACTCCGTCATAACTTGCCCTCTACCGCTTTGCGGCAAAACTCCA‑AAAAAAAAACCTGAAAAAAACGGCCTGACGTGAATCAAGCAATTTTTTTCAGGTTTTGCCCGCTTa < 2:642781/140‑1 (MQ=255)
cgcTCCTGCGACTATTTTTCTGGGTAACTCCGTCATAACTTTCCCTCTTCCGCTTTGCGGCAAAACTCCA‑AAAAAAAAACCTGAAAAAAACGGCCTGACGTGAATCAAGCAATTTTTTTCAGGTTTTGCCCGCTTAGTGc < 2:526984/138‑1 (MQ=255)
cTGCGACTATTTTTCTGGCTAACTCCGTCATAACTTGCCCTCTACCGCTTTGCGGCAAAACTCCA‑AAAAAAAAACCTGAAAAAAACGGCCTGACGTGAATCAAGCAATTTTTTTCAGGTTTTGCCCGCTTAGTGCGGTaa < 1:155889/140‑1 (MQ=255)
cTGCGACTATTTTTCTGGCTAACTCCGTCATAACTTGCCCTCTACCGCTTTGCGGCAAAACTCCA‑AAAAAAAAACCTGAAAAAAACGGCCTGACGTGAATCAAGCAATTTTTTTCAGGTTTTGCCCGCTTAGTGCGGTaa < 1:655666/140‑1 (MQ=255)
tGCGACTATTTTTCTGGCTAACTCCGTCATAACTTGCCCTCTACCGCTTTGCGGCAAAACTCCAAAAAAAAAAACCTGAAAAAAACGGCCTGACGTGAATCAAGCAATTTTTTTCAGGTTTTGCCCGCTTAGTGCGGTaa > 1:686826/1‑140 (MQ=255)
tGCGACTATTTTTCTGGCTAACTCCGTCATAACTTGCCCTCTACCGCTTTGCGGCAAAACTCC‑‑AAAAAAAAACCTGAAAAAAACGGCCTGACGTGAATCAAGCAATTTTTTTCAGGTTTTGCCCGCt < 1:21140/127‑1 (MQ=255)
tGCGACTATTTTTCTGGCTAACTCCGTCATAACTTGCCCTCTACCGCTTTGCGGCAAAACTCC‑‑AAAAAAAAACCTGAAAAAAACGGCCTGACGTGAATCAAGCAATTTTTTTCAGGTTTTGCCCGCt > 2:21140/1‑127 (MQ=255)
gCGACTATTTTTCTGGCTAACTCCGTCATAACTTGCCCTCTACCGCTTTGCGGCAAAACTCCA‑AAAAAAAAACCTGAAAAAAACGGCCTGACGTGAATCAAGCAATTTTTTTCAGGTTTTGCCCGCTTAGTGCGGTAACa < 1:59171/140‑1 (MQ=255)
ttttCTGGCTAACTCCGTCATAACTTGCCCTCTACCGCTTTGCGGCAAAACTCCA‑AAAAAAAAACCTGAAAAAAACGGCCTGACGTGAATCAAGCAATTTTTTTCAGGTTTTGCCCGCTTAGTGCGGTAACAATCCTTTa < 1:215756/140‑1 (MQ=255)
tCTGGCTAACTCCGTCATAACTTGCCCTCTACCGCTTTGCGGCAAAACTCCA‑AAAAAAAAACCTGAAAAAAACGGCCTGACGTGAATCAAGCAATTTTTTTCAGGTTTTGCCCGCTTAGTGCGGTAACAATCCTTTACTc < 2:72971/140‑1 (MQ=255)
tGGCTAACTCCGTCATAACTTGCCCTCTACCGCTTTGCGGCAAAACTCCAAAAAAAAAAACCTGAAAAAAACGGCCTGACGTGAATCAAGCAATTTTTTTCAGGTTTTGCCCGCTTAGTGCGGTAACAATCCTTTACTCa < 2:790670/140‑1 (MQ=255)
tAACTCCGTCATAACTTGCCCTCTACCGCTTTGCGGCAAAACTCCA‑AAAAAAAAACCTGAAAAAAACGGCCTGACGTGAATCAAGCAATTTTTTTCAGGTTTTGCCCGCTTAGTGCGGTAACAATCCtt < 1:464662/129‑1 (MQ=255)
tAACTCCGTCATAACTTGCCCTCTACCGCTTTGCGGCAAAACTCCA‑AAAAAAAAACCTGAAAAAAACGGCCTGACGTGAATCAAGCAATTTTTTTCAGGTTTTGCCCGCTTAGTGCGGTAACAATCCtt > 2:464662/1‑129 (MQ=255)
aaCTCCGTCATAACTTGCCCTCTACCGCTTTGCGGCAAAACTCCA‑AAAAAAAAACCTGAAAAAAACGGCCTGACGTGAATCAAGCAATTTTTTTCAGGTTTTGCCCGCTTAGTGCGGTAACAATCCTTTACTCAGtaata < 1:90899/140‑1 (MQ=255)
tCATAACTTGCCCTCTACCGCTTTGCGGCAAAACTCCA‑AAAAAAAAACCTGAAAAAAACGGCCTGACGTGAATCAAGCAATTTTTTTCAGGTTTTGCCCGCTTAGTGCGGTAACAATCCTTTAc > 2:39672/1‑124 (MQ=255)
tCATAACTTGCCCTCTACCGCTTTGCGGCAAAACTCCA‑AAAAAAAAACCTGAAAAAAACGGCCTGACGTGAATCAAGCAATTTTTTTCAGGTTTTGCCCGCTTAGTGCGGTAACAATCCTTTAc < 1:39672/124‑1 (MQ=255)
tCATAACTTGCCCTCTACCGCTTTGCGGCAAAACTCCA‑AAAAAAAAACCTGAAAAAAACGGCCTGACGTGAATCAAGCAATTTTTTTCAGGTTTTGCCCGCTTAGTGCGGTAACAATCCTTTACTCAGTAATAATATTTc > 2:115669/1‑140 (MQ=255)
tCATAACTTGCCCTCTACCGCTTTGCGGCAAAACTCCA‑AAAAAAAAACCTGAAAAAAACGGCCTGACGTGAATCAAGCAATTTTTTTCAGGTTTTGCCCGCTTAGTGCGGTAACAATCCTTTACTCAGTAATAATATTTc > 2:472269/1‑140 (MQ=255)
tCATAACTTGCCCTCTACCGCTTTGCGGCAAAACTCCA‑AAAAAAAAACCTGAAAAAAACGGCCTGACGTGAATCAAGCAATTTTTTTCAGGTTTTGCCCGCTTAGTGCGGTAACAATCCTTTACTCAGTAATAATATTTc > 1:418460/1‑140 (MQ=255)
cccTCTACCGCTTTGCGGCAAAACTCCA‑AAAAAAAAACCTGAAAAAAACGGCCTGACGTGAATCAAGCAATTTTTTTCAGGTTTTGCCCGCTTAGTGCGGTAACAATCCTTTACTCAGTAATAATATTTCAGTGTTCttt > 2:728476/1‑140 (MQ=255)
cccTCTACCGCTTTGCGGCAAAACTCCA‑AAAAAAAAACCTGAAAAAAACGGCCTGACGTGAATCAAGCAATTTTTTTCAGGTTTTGCCCGCTTAGTGCGGTAACAATCCTTTACTCAGTAATAATATTTCAGTGTTCttt > 1:903561/1‑140 (MQ=255)
cccTCTACCGCTTTGCGGCAAAACTCCA‑AAAAAAAAACCTGAAAAAAACGGCCTGACGGGAATCAAGCAATTTTTTTCAGGTTTTGCCCGCTTAGTGCGGTAACAATCCTTTACTCAGTAATAATATTTCAGTGTTCttt > 2:559976/1‑140 (MQ=255)
ctACCGCTTTGCGGCAAAACTCCA‑AAAAAAAAACCTGAAAAAAACGGCCTGACGTGAATCAAGCAATTTTTTTCAGGTTTTGCCCGCTTAGTGCGGTAACAATCCTTTACTCAGTAATAATATTTCAGTGTTCTTTgcgc > 1:3855/1‑140 (MQ=255)
tccGCTTTGCGGCAAAACTCCA‑AAAAAAAAACCTGAAAAAAACGGCCTGACGTGAATCAAGCAATTTTTTTCAGGTTTTGCCCGCTTAGTGCGGTAACAATCCTTTACTCAGTAATAATATTTCAGTGTTCTTTGCGCAc < 1:909158/139‑1 (MQ=255)
aCCGCTTTGCGGCAAAACTCCA‑AAAAAAAAACCTGAAAAAAACGGCCTGACGTGAATCAAGCAATTTTTTTCAGG‑TTTGCCCGCTTAGTGCGGTAACAATCCTTTACTCAGTAATAATATTTCAGTGTTCTTTGCGCAcg < 2:572577/140‑1 (MQ=255)
ccGCTTTGCGGCAAAACTCCA‑AAAAAAAAACCTGAAAAAAACGGCCTGACGTGAATCAAGCAATTTTTTTCAGGTTTTGCCCGCTTAGTGCGGTAACAATCCTTTACTCAGTAATAATATTTCAGTGTTCTTTGCGCAcg < 2:3855/140‑1 (MQ=255)
ccGCTTTGCGGCAAAACTCCA‑AAAAAAAAACCTGAAAAAAACGGCCTGACGTGAATCAAGCAATTTTTTTCAGGTTTTGCCCGCTTAGTGCGGTAACAATCCTTTACTCAGTAATAATATTTCAGTGTTCTTTGCGCAcg < 2:422451/140‑1 (MQ=255)
ccGCTTTGCGGCAAAACTCCA‑AAAAAAAAACCTGAAAAAAACGGCCTGACGTGAATCAAGCAATTTTTTTCAGGTTTTGCCCGCTTAGTGCGGTAACAATCCTTTACTCAGTAATAATATTTCAGTGTTCTTTGCGCAcg < 1:533838/140‑1 (MQ=255)
ccGCTTTGCGGCAAAACTCCA‑AAAAAAAAACCTGAAAAAAACGGCCTGACGTGAATCAAGCAATTTTTTTCAGGTTTTGCCCGCTTAGTGCGGTAACAATCCTTTACTCAGTAATAATATTTCAGTGTTCTTTGCGCAcg < 2:553994/140‑1 (MQ=255)
ccGCTTTGCGGCAAAACTCCA‑AAAAAAAAACCTGAAAAAAACGGCCTGACGTGAATCAAGAAATTTTTTTCAGGTTTTGCCCGCTTAGTGCGGTAACAATCCTTTACTCAGTAATAATATTTCAGTGTTCTTTGCGCAcg < 1:370507/140‑1 (MQ=255)
gCTTTGCGGCAAAACTCCA‑AAAAAAAAACCTGAAAAAAACGGCCTGACGTGAATCAAGCAATTTTTTTCAGGTTTTGCCCGCTTAGTGCGGTAACAATCCTTTACTCAGTAATAATATTTCAGTGTTCTTTGCGCAcgcg < 2:411865/140‑1 (MQ=255)
gCTTTGCGGCAAAACTCCA‑AAAAAAAAACCTGAAAAAAACGGCCTGACGTGAATCAAGCAATTTTTTTCAGGTTTTGCCCGCTTAGTGCGGTAACAATCCTTTACTCAGTAATAATATTTCAGTGTTCTTTGCGCAcgcg < 2:903561/140‑1 (MQ=255)
gCTTTGCGGCAAAACTCCA‑AAAAAAAAACCTGAAAAAAACGGCCTGACGTGAATCAAGCAATTTTTTTCAGGTTTTGCCCGCTTAGTGCGGTAACAATCCTTTACTCAGTAATAATATTTCAGTGTTCTTTGCGCAcgcg < 2:947209/140‑1 (MQ=255)
gCTTTGCGGCAAAACTCCA‑AAAAAAAAACCTGAAAAAAACGGCCTGACGTGAATCAAGCAATTTTTTTCAGGTTTTGCCCGCTTAGTGCGGTAACAATCCTTTACTCAGTAATAATATTTCAGTGTTCTTTGCGCAcgc > 2:718154/1‑139 (MQ=255)
gCTTTGCGGCAAAACTCCA‑AAAAAAAAACCTGAAAAAAACGGCCTGACGTGAATCAAGCAATTTTTTTCAGGTTTTGCCCGCTTAGTGCGGTAACAATCCTTTACTCAGTAATAATATTTCAGTGTTCTTTGCGCAcgc < 1:718154/139‑1 (MQ=255)
cTTTGCGGCAAAACTCCAAAAAAAAAAACCTGAAAAAAACGGCCTGACGTGAATCAAGCAATTTTTTTCAGGTTTTGCCCGCTTAGTGCGGTAACAATCCTTTACTCAGTAATAATATTTCAGTGTTCTTTGCGCAcgcg < 2:686826/140‑1 (MQ=255)
cTTTGCGGCAAAACTCCA‑AAAAAAAAACCTGAAAAAAACGGCCTGACGTGAATCAAGCAATTTTTTTCAGGTTTTGCCCGCTTAGTGCGGTAACAATCCTTTACTCAGTAATAATATTTCAGTGTTCTTTGCGCACgcgc > 1:817994/1‑140 (MQ=255)
tGCGGCAAAACTCCA‑AAAAAAAAACCTGAAAAAAACGGCCTGACGTGAATCAAGCAATTTTTTTCAGGTTTTGCCCGCTTAGTGCGGTAACAATCCTTTACTCAGTAATAATATTTCACTGTTCTTTGCGCACGCGctct < 2:723412/140‑1 (MQ=255)
cGGCAAAACTCCA‑AAAAAAAAACCTGAAAAAAACGGCCTGACGTGAATCAAGCAATTTTTTTCAGGTTTTGCCCGCTTAGTGCGGTAACAATCCTTTACTCAGTAATAATATTTCAGTGTTCTTTGCGCAcg < 2:221318/132‑1 (MQ=255)
cGGCAAAACTCCA‑AAAAAAAAACCTGAAAAAAACGGCCTGACGTGAATCAAGCAATTTTTTTCAGGTTTTGCCCGCTTAGTGCGGTAACAATCCTTTACTCAGTAATAATATTTCAGTGTTCTTTGCGCAcg > 1:221318/1‑132 (MQ=255)
cGGCAAAACTCC‑‑AAAAAAAAACCTGAAAAAAACGGCCTGACGTGAATCAAGCAATTTTTTTCAGGTTTTGCCCGCTTAGTGCGGTAACAATCCTTTACTCAGTAATAATATTTCAGTGTTCTTTGCGCACGCGCTCtata > 2:747604/1‑140 (MQ=255)
|
TTTCATCCTTTAATTTAAAACGTAATCGCGTTGCGCAATGCATCAGACTCACAATGTTATCTGCGCCCCCGACTCCTGCGACTATTTTTCTGGCTAACTCCGTCATAACTTGCCCTCTACCGCTTTGCGGCAAAACTCC‑‑AAAAAAAAACCTGAAAAAAACGGCCTGACGTGAATCAAGCAATTTTTTTCAGGTTTTGCCCGCTTAGTGCGGTAACAATCCTTTACTCAGTAATAATATTTCAGTGTTCTTTGCGCACGCGCTCTATA > NC_000913/3905492‑3905758
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A