Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A9 F28 I1 R1
|
151 |
87.4 |
2971636 |
99.2% |
2947862 |
138.5 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,405,378 |
A→G |
D213G (GAC→GGC) |
abgR → |
putative LysR‑type DNA‑binding transcriptional regulator AbgR |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,405,378 | 0 | A | G | 100.0%
| 284.3
/ NA
| 79 | D213G (GAC→GGC) | abgR | putative LysR‑type DNA‑binding transcriptional regulator AbgR |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (39/40); total (39/40) |
ATTCGCGATCTTTTGCCGCCCGGGACACCCCGCCATTGGTGCCCGTTCGATCAAACAGTTACTGGATTACAGCTGGACAATGCCGACGCCACACGGCAGCTACTACAAACAGTTGAGTGAATTGCTTGACGATCAGGCGCAAACGCCACAGGTCGGTGTAGTCTGCGAGACGTTCTCAGCCTGTATCAGTCTGGTGGCAAAAAGCGATTTTCTCAGCAAACTGCCTGAAGAAATGGGCTGCGATCCCTTGCACGGACAGGGG > NC_000913/1405250‑1405511
|
aTTCGCGATCTTTTGCCGCCCGGGACACCCCGCCATTGGTGCCCGTTCGATCAAACAGTTACTGGATTACAGCTGGACAATGCCGACGCCACACGGCAGCTACTACAAACAGTTGAGTGAATTGCTTGGCGATCAGgcgc > 2:96760/1‑140 (MQ=255)
aTTCGCGATCTTTTGCCGCCCGGGACACCCCGCCATTGGTGCCCGTTCGATCAAACAGTTACTGGATTACAGCTGGACAATGCCGACGCCACACGGCAGCTACTACAAACAGTTGAGTGAATTGCTTGGCGATCAGgcgc > 1:49412/1‑140 (MQ=255)
ttCGCGATCTTTTGCCGCCCGGGACACCCCGCCATTGGTGCCCGTTCGATCAAACAGTTACTGGATTACAGCTGGACAATGCCGACGCCACACGGCAGCTACTACAAACAGTTGAGTGAATTGCTTGGCGATCAGGCGCa > 2:1461681/1‑140 (MQ=255)
ttttGCCGCCCGGGACACCCCGCCATTGGTGCCCGTTCGATCAAACAGTTACTGGATTACAGCTGGACAATGCCGACGCCACACGGCAGCTACTACAAACAGTTGAGTGAATTGCTTGGCGATCAGGCGCAAACGCcaca < 1:23496/140‑1 (MQ=255)
ttGCCGCCCGGGACACCCCGCCATTGGTGCCCGTTCGATCAAACAGTTACTGGATTACAGCTGGACAATGCCGACGCCACACGGCAGCTACTACAAACAGTTGAGTGAATTGCTTGGCGATCAGGCGCAAACGCCACAgg < 2:1221661/140‑1 (MQ=255)
ccgccCGGGACACCCCGCCATTGGTGCCCGTTCGATCAAACAGTTACTGGATTACAGCTGGACAATGCCGACGCCACACGGCAGCTACTACAAACAGTTGAGTGAATTGCTTGGCGATCAGGCGCAAACGCCACAgg < 2:40420/137‑1 (MQ=255)
ccgccCGGGACACCCCGCCATTGGTGCCCGTTCGATCAAACAGTTACTGGATTACAGCTGGACAATGCCGACGCCACACGGCAGCTACTACAAACAGTTGAGTGAATTGCTTGGCGATCAGGCGCAAACGCCACAgg > 1:40420/1‑137 (MQ=255)
cccGGGACACCCCGCCATTGGTGCCCGTTCGATCAAACAGTTACTGGATTACAGCTGGACAATGCCGACGCCACACGGCAGCTACTACAAACAGTTGAGTGAATTGCTTGGCGATCAGGCGCAAACGCCACAgg < 1:3874/134‑1 (MQ=255)
cccGGGACACCCCGCCATTGGTGCCCGTTCGATCAAACAGTTACTGGATTACAGCTGGACAATGCCGACGCCACACGGCAGCTACTACAAACAGTTGAGTGAATTGCTTGGCGATCAGGCGCAAACGCCACAgg > 2:3874/1‑134 (MQ=255)
cGGGACACCCCGCCATTGGTGCCCGTTCGATCAAACAGTTACTGGATTACAGCTGGACAATGCCGACGCCACACGGCAGCTACTACAAACAGTTGAGTGAATTGCTTGGCGATCAGGCGCAAACGCCACAGGTCGGTGTa > 1:1297950/1‑140 (MQ=255)
cGGGACACCCCGCCATTGGTGCCCGTTCGATCAAACAGTTACTGGATTACAGCTGGACAATGCCGACGCCACACGGCAGCTACTACAAACAGTTGAGTGAATTGCTTGGCGATCAGGCGCAAACGCCACAGGTCGGTGTa < 1:413842/140‑1 (MQ=255)
cGGGACACCCCGCCATTGGTGCCCGTTCGATCAAACAGTTACTGGATTACAGCTGGACAATGCCGACGCCACACGGCAGCTACTACAAACAGTTGAGTGAATTGCTTGGCGATCAGGCGCAAACGCCACAGGTCGGTGTa < 1:798641/140‑1 (MQ=255)
ggACACCCCGCCATTGGTGCCCGTTCGATCAAACAGTTACTGGATTACAGCTGGACAATGCCGACGCCACACGGCAGCTACTACAAACAGTTGAGTGAATTGCTTGGCGATCAGGCGCAAACGCCACAgg > 2:1261508/1‑130 (MQ=255)
ggACACCCCGCCATTGGTGCCCGTTCGATCAAACAGTTACTGGATTACAGCTGGACAATGCCGACGCCACACGGCAGCTACTACAAACAGTTGAGTGAATTGCTTGGCGATCAGGCGCAAACGCCACAgg < 1:1261508/130‑1 (MQ=255)
ggACACCCCGCCATTGGTGCCCGTTCGATCAAACAGTTACTGGATTACAGCTGGACAATGCCGACGCCACACGGCAGCTACTACAAACAGTTGAGTGAATTGCTTGGCGATCAGGCGCAAACGCCACAGGTCGGTGTAGt > 1:316061/1‑140 (MQ=255)
ccccGCCATTGGTGCCCGTTCGATCAAACAGTTACTGGATTACAGCTGGACAATGCCGACGCCACACGGCAGCTACTACAAACAGTTGAGTGAATTGCTTGGCGATCAGGCGCAAACGCCACAGGTCGGTGTAGTCTGCg < 1:1161802/140‑1 (MQ=255)
cccGCCATTGGTGCCCGTTCGATCAAACAGTTACTGGATTACAGCTGGACAATGCCGACGCCACACGGCAGCTACTACAAACAGTTGAGTGAATTGCTTGGCGATCAGGCGCAAACGCCACAGGTCGGTGTAGTCTGCga > 2:1459099/1‑140 (MQ=255)
cccGCCATTGGTGCCCGTTCGATCAAACAGTTACTGGATTACAGCTGGACAATGCCGACGCCACACGGCAGCTACTACAAACAGTTGAGTGAATTGCTTGGCGATCAGGCGCAAACGCCACAGGTCGGTGTAGTCTGCga > 1:1097765/1‑140 (MQ=255)
cGCCATTGGTGCCCGTTCGATCAAACAGTTACTGGATTACAGCTGGACAATGCCGACGCCACACGGCAGCTACTACAAACAGTTGAGTGAATTGCTTGGCGATCAGGCGCAAACGCCACAGGTCGGTGTAGTCTGCgaga < 2:65132/140‑1 (MQ=255)
cGCCATTGGTGCCCGTTCGATCAAACAGTTACTGGATTACAGCTGGACAATGCCGACGCCACACGGCAGCTACTACAAACAGTTGAGTGAATTGCTTGGCGATCAGGCGCAAACGCCACAGGTCGGTGTAGTCTGCgaga > 2:1412005/1‑140 (MQ=255)
ccATTGGTGCCCGTTCGATCAAACAGTTACTGGATTACAGCTGGACAATGCCGACGCCACACGGCAGCTACTACAAACAGTTGAGTGAATTGCTTGGCGATCAGGCGCAAACGCCACAGGTCGGTGTAGTCTGCGAGACg < 2:1097765/140‑1 (MQ=255)
ccATTGGTGCCCGTTCGATCAAACAGTTACTGGATTACAGCTGGACAATGCCGACGCCACACGGCAGCTACTACAAACAGTTGAGTGAATTGCTTGGCGATCAGGCGCAAACGCCACAGGTCGGTGTAGTCTGCGAGACg > 1:2136/1‑140 (MQ=255)
cATTGGTGCCCGTTCGATCAAACAGTTACTGGATTACAGCTGGACAATGCCGACGCCACACGGCAGCTACTACAAACAGTTGAGTGAATTGCTTGGCGATCAGGCGCAAACGCCACAGGTCGGTGTAGTCTGCGAGACGt > 2:1458411/1‑140 (MQ=255)
aTTGGTGCCCGTTCGATCAAACAGTTACTGGATTACAGCTGGACAATGCCGACGCCACACGGCAGCTACTACAAACAGTTGAGTGAATTGCTTGGCGATCAGGCGCAAACGCCACAGGTCGGTGTAGTCTGCGAGACGtt < 2:2136/140‑1 (MQ=255)
ttGGTGCCCGTTCGATCAAACAGTTACTGGATTACAGCTGGACAATGCCGACGCCACACGGCAGCTACTACAAACAGTTGAGTGAATTGCTTGGCGATCAGGCGCAAACGCCACAGGTCGGTGTAGTCTGCGAGACGTtc > 1:333047/1‑140 (MQ=255)
tGGTGCCCGTTCGATCAAACAGTTACTGGATTACAGCTGGACAATGCCGACGCCACACGGCAGCTACTACAAACAGTTGAGTGAATTGCTTGGCGATCAGGCGCAAACGCCACAGGTCGGTGTAGTCTGCGAGACGTtct < 2:888856/140‑1 (MQ=255)
tGGTGCCCGTTCGATCAAACAGTTACTGGATTACAGCTGGACAATGCCGACGCCACACGGCAGCTACTACAAACAGTTGAGTGAATTGCTTGGCGATCAGGCGCAAACGCCACAGGTCGGTGTAGTCTGCGAGACGTtct < 2:684403/140‑1 (MQ=255)
gTGCCCGTTCGATCAAACAGTTACTGGATTACAGCTGGACAATGCCGACGCCACACGGCAGCTACTACAAACAGTTGAGTGAATTGCTTGGCGATCAGGCGCAAACGCCACAGGTCGGTGTAGTCTGCGAGACGTTCTCa < 2:316061/140‑1 (MQ=255)
gCCCGTTCGATCAAACAGTTACTGGATTACAGCTGGACAATGCCGACGCCACACGGCAGCTACTACAAACAGTTGAGTGAATTGCTTGGCGATCAGGCGCAAACGCCACAGGTCGGTGTAGTCTGCGAGACGTTCTCAGc < 2:49412/140‑1 (MQ=255)
gCCCGTTCGATCAAACAGTTACTGGATTACAGCTGGACAATGCCGACGCCACACGGCAGCTACTACAAACAGTTGAGTGAATTGCTTGGCGATCAGGCGCAAACGCCACAGGTCGGTGTAGTCTGCGAGACGTTCTCAGc < 1:976383/140‑1 (MQ=255)
gCCCGTTCGATCAAACAGTTACTGGATTACAGCTGGACAATGCCGACGCCACACGGCAGCTACTACAAACAGTTGAGTGAATTGCTTGGCGATCAGGCGCAAACGCCACAGGTCGGTGTAGTCTGCGAGACGTTCTCAGc < 1:1412005/140‑1 (MQ=255)
gCCCGTTCGATCAAACAGTTACTGGATTACAGCTGGACAATGCCGACGCCACACGGCAGCTACTACAAACAGTTGAGTGAATTGCTTGGCGATCAGGCGCAAACGCCACAGGTCGGTGTAGTCTGCGAGACGTTCTCAGc < 1:1458411/140‑1 (MQ=255)
gCCCGTTCGATCAAACAGTTACTGGATTACAGCTGGACAATGCCGACGCCACACGGCAGCTACTACAAACAGTTGAGTGAATTGCTTGGCGATCAGGCGCAAACGCCACAGGTCGGTGTAGTCTGCGAGACGTTCTCAGc < 1:1459099/140‑1 (MQ=255)
ccGTTCGATCAAACAGTTACTGGATTACAGCTGGACAATGCCGACGCCACACGGCAGCTACTACAAACAGTTGAGTGAATTGCTTGGCGATCAGGCGCAAACGCCACAGGTCGGTGTAGTCTGCGAGACGTTCTCAGCCt < 1:475164/140‑1 (MQ=255)
cGTTCGATCAAACAGTTACTGGATTACAGCTGGACAATGCCGACGCCACACGGCAGCTACTACAAACAGTTGAGTGAATTGCTTGGCGATCAGGCGCAAACGCCACAGGTCGGTGTAGTCTGCgag > 2:1321191/1‑126 (MQ=255)
cGTTCGATCAAACAGTTACTGGATTACAGCTGGACAATGCCGACGCCACACGGCAGCTACTACAAACAGTTGAGTGAATTGCTTGGCGATCAGGCGCAAACGCCACAGGTCGGTGTAGTCTGCgag < 1:1321191/126‑1 (MQ=255)
cGTTCGATCAAACAGTTACTGGATTACAGCTGGACAATGCCGACGCCACACGGCAGCTACTACAAACAGTTGAGTGAATTGCTTGGCGATCAGGCGCAAACGCCACAGGTCGGTGTAGTCTGCGAGACGTTCTCAGCCTg > 1:148132/1‑140 (MQ=255)
ttCGATCAAACAGTTACTGGATTACAGCTGGACAATGCCGACGCCACACGGCAGCTACTACAAACAGTTGAGTGAATTGCTTGGCGATCAGGCGCAAACGCCACAGGTCGGTGTAGTCTGCGAGACGTTCTCAGCCTGTa > 1:1374042/1‑140 (MQ=255)
ttCGATCAAACAGTTACTGGATTACAGCTGGACAATGCCGACGCCACACGGCAGCTACTACAAACAGTTGAGTGAATTGCTTGGCGATCAGGCGCAAACGCCACAGGTCGGTGTAGTCTGCGAGACGTTCTCAGCCTGTa > 2:7621/1‑140 (MQ=255)
ttCGATCAAACAGTTACTGGAGTACAGCTGGACAATGCCGACGCCACACGGCAGCTACTACAAACAGTTGAGTGAATTGCTTGGCGATCAGGCGCAAACGCCACAGGTCGGTGTAGTCTGCGAGACGTTCTCAGCCTGTa > 2:1057362/1‑140 (MQ=255)
tCGATCAAACAGTTACTGGATTACAGCTGGACAATGCCGACGCCACACGGCAGCTACTACAAACAGTTGAGTGAATTGCTTGGCGATCAGGCGCAAACGCCACAGGTCGGTGTAGTCTGCGAGACGTTCTCAGCCTGTAt < 1:1456250/140‑1 (MQ=255)
tCAAACAGTTACTGGATTACAGCTGGACAATGCCGACGCCACACGGCAGCTACTACAAACAGTTGAGTGAATTGCTTGGCGATCAGGCGCAAACGCCACAGGTCGGTGTAGTCTGCGAGACGTTCTCAGCCTGTATCAGt < 2:1374042/140‑1 (MQ=255)
aaCAGTTACTGGATTACAGCTGGACAATGCCGACGCCACACGGCAGCTACTACAAACAGTTGAGTGAATTGCTTGGCGATCAGGCGCAAACGCCACAGGTCGGTGTAGTCTGCGAGACGTTCTCAGCCTGTATCAGTCtg > 2:1468876/1‑140 (MQ=255)
aCAGTTACTGGATTACAGCTGGACAATGCCGACGCCACACGGCAGCTACTACAAACAGTTGAGTGAATTGCTTGGCGATCAGGCGCAAACGCCACAGGTCGGTGTAGTCTGCGAGACGTTCTCAGCCTGTATCAGTCtgg > 2:555644/1‑140 (MQ=255)
ttACTGGATTACAGCTGGACAATGCCGACGCCACACGGCAGCTACTACAAACAGTTGAGTGAATTGCTTGGCGATCAGGCGCAAACGCCACAGGTCGGTGTAGTCTGCGAGACGTTCTCAGCCTGTATCAGTCTGGTGGc < 1:1396406/140‑1 (MQ=255)
ggACAATGCCGACGCCACACGGCAGCTACTACAAACAGTTGAGTGAATTGCTTGGCGATCAGGCGCAAACGCCACAGGTCGGTGTAGTCTGCGAGACGTTCTCAGCCTGTATCAGTCTGGTGGCAAAAAGCg < 1:1432981/132‑1 (MQ=255)
ggACAATGCCGACGCCACACGGCAGCTACTACAAACAGTTGAGTGAATTGCTTGGCGATCAGGCGCAAACGCCACAGGTCGGTGTAGTCTGCGAGACGTTCTCAGCCTGTATCAGTCTGGTGGCAAAAAGCg > 2:1432981/1‑132 (MQ=255)
ggACAATGCCGACGCCACACGGCAGCTACTACAAACAGTTGAGTGAATTGCTTGGCGATCAGGCGCAAACGCCACAGGTCGGTGTAGTCTGCGAGACGTTCTCAGCCTGTATCAGTCTGGTGGCAAAAAGCGATTTtctc > 2:1096086/1‑140 (MQ=255)
ggACAATGCCGACGCCACACGGCAGCTACTACAAACAGTTGAGTGAATTGCTTGGCGATCAGGCGCAAACGCCACAGGTCGGTGTAGTCTGCGAGACGTTCTCAGCCTGTATCAGTCTGGTGGCAAAAAGCGATTTtctc > 1:432721/1‑140 (MQ=255)
gACAATGCCGACGCCACACGGCAGCTACTACAAAGAGCTGAGAGAATTGCTTCGCGATCAGACGAAAGCGCCACAGGTCGGAGAAGTCTGCGCGACGTTCTCAGCCTGTATCAGGCTGGTGGCATAAAGCGCTTTTCTCa > 2:624130/1‑140 (MQ=255)
cAATGCCGACGCCACACGGCAGCTACTACAAACAGTTGAGTGAATTGCTTGGCGATCAGGCGCAAACGCCACAGGTCGGTGTAGTCTGCGAGACGTTCTCAGCCTGTATCAGTCTGGTGGCAAAAAGCGATTTTCTCAGc < 1:96760/140‑1 (MQ=255)
tGCCGACGCCACACGGCAGCTACTACAAACAGTTGAGTGAATTGCTTGGCGATCAGGCGCAAACGCCACAGGTCGGTGTAGTCTGCGAGACGTTCTCAGCCTGTATCAGTCTGGTGGCAAAAAGCGATTTTCTCAGCaaa < 1:195225/140‑1 (MQ=255)
tGCCGACGCCACACGGCAGCTACTACAAACAGTTGAGTGAATTGCTTGGCGATCAGGCGCAAACGCCACAGGTCGGTGTAGTCTGCGAGACGTTCTCAGCCTGTATCAGTCTGGTGGCAAAAAGCGATTTTCTCAGCaaa > 1:314056/1‑140 (MQ=255)
tGCCGACGCCACACGGCAGCTACTACAAACAGTTGAGTGAATTGCTTGGCGATCAGGCGCAAACGCCACAGGTCGGTGTAGTCTGCGAGACGTTCTCAGCCTGTATCAGTCTGGTGGCAAAAAGCGATTTTCTCAGCaaa > 2:195225/1‑140 (MQ=255)
cGACGCCACACGGCAGCTACTACAAACAGTTGAGTGAATTGCTTGGCGATCAGGCGCAAACGCCACAGGTCGGTGTAGTCTGCGAGACGTTCTCAGCCTGTATCAGTCTGGTGGCAAAAAGCGATTTTCTCAGCAAACTg < 1:1096086/140‑1 (MQ=255)
gACGCCACACGGCAGCTACTACAAACAGTTGAGTGAATTGCTTGGCGATCAGGCGCAAACGCCACAGGTCGGTGTAGTCTGCGAGACGTTCTCAGCCTGTATCAGTCTGGTGGCAAAAAGCGATTTTCTCAGCAAACTGc < 1:387688/140‑1 (MQ=255)
gACGCCACACGGCAGCTACTACAAACAGTTGAGTGAATTGCTTGGCGATCAGGCGCAAACGCCACAGGTCGGTGTAGTCTGCGAGACGTTCTCAGCCTGTATCAGTCTGGTGGCAAAAAGCGATTTTCTCAGCAAACTGc < 1:1461681/140‑1 (MQ=255)
aCGCCACACGGCAGCTACTACAAACAGTTGAGTGAATTGCTTGGCGATCAGGCGCAAACGCCACAGGTCGGTGTAGTCTGCGAGACGTTCTCAGCCTGTATCAGTCTGGTGGCAAAAAGCGATTTTCTCAGCAAACTGcc > 2:458514/1‑140 (MQ=255)
gCCACACGGCAGCTACTACAAACAGTTGAGTGAATTGCTTGGCGATCAGGCGCAAACGCCACAGGTCGGTGTAGTCTGCGAGACGTTCTCAGCCTGTATCAGTCTGGTGGCAAAAAGCGATTTTCTCAGCAAACTGCCTg < 1:458514/140‑1 (MQ=255)
ctactaCAAACAGTTGAGTGAATTGCTTGGCGATCAGGCGCAAACGCCACAGGTCGGTGTAGTCTGCGAGACGTTCTCAGCCTGTATCAGTCTGGTGGCAAAAAGCGATTTTCTCAGCAAACTGCCTGAAGAAATGGGCt < 1:794003/140‑1 (MQ=255)
ctactaCAAACAGTTGAGTGAATTGCTTGGCGATCAGGCGCAAACGCCACAGGTCGGTGTAGTCTGCGAGACGTTCTCAGCCTGTATCAGTCTGGTGGCAAAAAGCGATTTTCTCAGCAAACTGCCTGAAGAAATGGGCt > 2:1297009/1‑140 (MQ=255)
aGTTGAGTGAATTGCTTGGCGACCAGGCGCAAACGCCACAGGTCGGTGTAGTCTGCGAGACGTTCTCAGCCTGTATCAGTCTGGTGGCAAAAAGCGATTTTCTCAGCAAACTGCCTGAAGAAATGGGCTGCGATCCCTTg > 1:1170072/1‑140 (MQ=255)
ttGAGTGAATTGCTTGGCGATCAGGCGCAAACGCCACAGGTCGGTGTAGTCTGCGAGACGTTCTCAGCCTGTATCAGTCTGGTGGCAAAAATCGATTTTCTCAGCAAACTGCCTGAAGAAATGGGCTGCGATCCCTTGCa > 2:614811/1‑140 (MQ=255)
ttGAGTGAATTGCTTGGCGATCAGGCGCAAACGCCACAGGTCGGTGTAGTCTGCGAGACGTTCTCAGCCTGTATCAGTCTGGTGGCAAAAAGCGATTTTCTCAGCAAACTGCCTGAAGAAATGGGCTGCGATCCCTTGCa > 2:10270/1‑140 (MQ=255)
ttGAGTGAATTGCTTGGCGATCAGGCGCAAACGCCACAGGTCGGTGTAGTCTGCGAGACGTTCTCAGCCTGTATCAGTCTGGTGGCAAAAAGCGATTTTCTCAGCAAACTGCCTGAAGAAATGGGCTGCGATCCCTTGCa > 2:113953/1‑140 (MQ=255)
ttGAGTGAATTGCTTGGCGATCAGGCGCAAACGCCACAGGTCGGTGTAGTCTGCGAGACGTTCTCAGCCTGTATCAGTCTGGTGGCAAAAAGCGATTTTCTCAGCAAACTGCCTGAAGAAATGGGCTGCGATCCCTTGCa > 1:1416671/1‑140 (MQ=255)
ttGAGTGAATTGCTTGGCGATCAGGCGCAAACGCCACAGGTCGGTGTAGTCTGCGAGACGTTCTCAGCCTGTATCAGTCTGGTGGCAAAAAGCGATTTTCTCAGCAAACTGCCTGAAGAAATGGGCTGCGATCCCTTGCa > 2:1130207/1‑140 (MQ=255)
ttGAGTGAATTGCTTGGCGATCAGGCGCAAACGCCACAGGTCGGTGTAGTCTGCGAGACGTTCTCAGCCTGTATCAGTCTGGTGGCAAAAAGCGATTTTCTCAGCAAACTGCCTGAAGAAATGGGCTGCGATCCCTTGCa < 1:555644/140‑1 (MQ=255)
ttGAGTGAATTGCTTGGCGATCAGGCGCAAACGCCACAGGTCGGTGTAGTCTGCGAGACGTTCTCAGCCTGTATCAGTCTGGTGGCAAAAAGCGATTTTCTCAGCAAACTGCCTGAAGAAATGGGCTGCGATCCCTTGCa > 1:699868/1‑140 (MQ=255)
aGTGAATTGCTTGGCGATCAGGCGCAAACGCCACAGGTCGGTGTAGTCTGCGAGACGTTCTCAGCCTGTATCAGTCTGGTGGCAAAAAGCGATTTTCTCAGCAAACTGCCTGAAGAAATGGGCTGCGATCCCTTGCa < 2:743824/137‑1 (MQ=255)
aGTGAATTGCTTGGCGATCAGGCGCAAACGCCACAGGTCGGTGTAGTCTGCGAGACGTTCTCAGCCTGTATCAGTCTGGTGGCAAAAAGCGATTTTCTCAGCAAACTGCCTGAAGAAATGGGCTGCGATCCCTTGCa > 1:743824/1‑137 (MQ=255)
aGTGAATTGCTTGGCGATCAGGCGCAAACGCCACAGGTCGGTGTAGTCTGCGAGACGTTCTCAGCCTGTATCAGTCTGGTGGCAAAAAGCGATTTTCTCAGCAAACTGCCTGAAGAAATGGGCTGCGATCCCTTGCACgg > 1:1041546/1‑140 (MQ=255)
aGTGAATTGCTTGGCGATCAGGCGCAAACGCCACAGGTCGGTGTAGTCTGCGAGACGTTCTCAGCCTGTATCAGTCTGGTGGCAAAAAGCGATTTTCTCAGCAAACTGCCTGAAGAAATGGGCTGCGATCCCTTGCACgg > 2:822401/1‑140 (MQ=255)
aGTGAATTGCTTGGCGATCAGGCGCAAACGCCACAGGTCGGTGTAGTCTGCGAGACGTTCTCAGCCTGTATCAGTCTGGTGGCAAAAAGCGATTTTCTCAGCAAACTGCCTGAAGAAATGGGCTGCGATCCCTTGCACgg > 2:846426/1‑140 (MQ=255)
tGAATTGCTTGGCGATCAGGCGCAAACGCCACAGGTCGGTGTAGTCTGCGAGACGTTCTCAGCCTGTATCAGTCTGGTGGCAAAAAGCGATTTTCTCAGCAAACTGCCTGAAGAAATGGGCTGCGATCCCTTGCACGGAc < 2:1416671/140‑1 (MQ=255)
gAATTGCTTGGCGATCAGGCGCAAACGCCACAGGTCGGTGTAGTCTGCGAGACGTTCTCAGCCTGTATCAGTCTGGTGGCAAAAAGCGATTTTCTCAGCAAACTGCCTGAAGAAATGGGCTGCGATCCCTTGCACGGACa < 2:314056/140‑1 (MQ=255)
aTTGCTTGGCGATCAGGCGCAAACGCCACAGGTCGGTGTAGTCTGCGAGACGTTCTCAGCCTGTATCAGTCTGGTGGCAAAAAGCGATTTTCTCAGCAAACTGCCTGAAGAAATGGGCTGCGATCCCTTGCACGGACAgg < 1:1130207/140‑1 (MQ=255)
ttGCTTGGCGATCAGGCGCAAACGCCACAGGTCGGTGTAGTCTGCGAGACGTTCTCAGCCTGTATCAGTCTGGTGGCAAAAAGCGATTTTCTCAGCAAACTGCCTGAAGAAATGGGCTGCGATCCCTTGCACGGACAggg < 1:1468876/140‑1 (MQ=255)
ttGCTTGGCGATCAGGCGCAAACGCCACAGGTCGGTGTAGTCTGCGAGACGTTCTCAGCCTGTATCAGTCTGGTGGCAAAAAGCGATTTTCTCAGCAAACTGCCTGAAGAAATGGGCTGCGATCCCTTGCACGGACAggg < 2:148132/140‑1 (MQ=255)
tGCTTGGCGATCAGGCGCAAACGCCACAGGTCGGTGTAGTCTGCGAGACGTTCTCAGCCTGTATCAGTCTGGTGGCAAAAAGCGATTTTCTCAGCAAACTGCCTGAAGAAATGGGCTGCGATCCCTTGCACGGACAgggg < 2:432721/140‑1 (MQ=255)
tGCTTGGCGATCAGGCGCAAACGCCACAGGTCGGTGTAGTCTGCGAGACGTTCTCAGCCTGTATCAGTCTGGTGGCAAAAAGCGATTTTCTCAGCAAACTGCCTGAAGAAATGGGCTGCGATCCCTTGCACGGACAgggg > 1:681691/1‑140 (MQ=255)
|
ATTCGCGATCTTTTGCCGCCCGGGACACCCCGCCATTGGTGCCCGTTCGATCAAACAGTTACTGGATTACAGCTGGACAATGCCGACGCCACACGGCAGCTACTACAAACAGTTGAGTGAATTGCTTGACGATCAGGCGCAAACGCCACAGGTCGGTGTAGTCTGCGAGACGTTCTCAGCCTGTATCAGTCTGGTGGCAAAAAGCGATTTTCTCAGCAAACTGCCTGAAGAAATGGGCTGCGATCCCTTGCACGGACAGGGG > NC_000913/1405250‑1405511
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
