Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A9 F28 I1 R1 151 87.4 2971636 99.2% 2947862 138.5

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 1,879,114 T→C T48A (ACG→GCG)  yeaQ ← PF04226 family protein YeaQ

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,879,1140TC100.0% 327.3 / NA 92T48A (ACG→GCG) yeaQPF04226 family protein YeaQ
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (46/46);  total (46/46)

TGTGCAGCCTTTGTGCAATTTAAGCGTTAACTTTTAATCTTCCTGTAGATAAATAGCACGACAATCGCACCAATAACGGCAACCACGAAGCTGCCAAAATTGAAGCCATCGACTTTACCAAAGCCAAACAGCGTGCTGATCCATCCGCCGACTACGGCACCGACTATCCCCAGCAGGATAGTCATAAAGAATCCACCTCCATCTTTACCTGGCATGATCCACTTCGCCAGAATACCGGCAATAAGCCCAAAAATAATCCATGACAGA  >  NC_000913/1878981‑1879247
                                                                                                                                     |                                                                                                                                     
tgtgCAGCCTTTGTGCAATTTAAGCGTTAACTTTTAATCTTCCTGTAGATAAATAGCACGACAATCGCACCAATAACGGCAACCACGAAGCTGCCAAAATTGAAGCCATCGACTTTACCAAAGCCAAACAGCGCGCTGat                                                                                                                                 >  1:546416/1‑140 (MQ=255)
  tgCAGCCTTTGTGCAATTTAAGCGTTAACTTTTAATCTTCCTGTAGATAAATAGCACGACAATCGCACCAATAACGGCAACCACGAAGCTGCCAAAATTGAAGCCATCGACTTTACCAAAGCCAAACAGCGCGCTGatcc                                                                                                                               >  2:540991/1‑140 (MQ=255)
    cAGCCTTTGTGCAATTTAAGTGTTAACTTTTAATCTTCCTGTAGATAAATAGCACGACAATCGCACCAATAACGGCAACCACGAAGCTGCCAAAATTGAAGCCATCGACTTTACCAAAGCCAAACAGCGCGCTGatccat                                                                                                                             >  1:757096/1‑140 (MQ=255)
       ccTTTGTGCAATTTAAGCGTTAACTTTTAATCTTCCTGTAGATAAATAGCACGACAATCGCACCAATAACGGCAACCACGAAGCTGCCAAAATTGAAGCCATCGACTTTACCAAAGCCAAACAGCGCGCTGATCCATccg                                                                                                                          >  2:358129/1‑140 (MQ=255)
       ccTTTGTGCAATTTAAGCGTTAACTTTTAATCTTCCTGTAGATAAATAGCACGACAATCGCACCAATAACGGCAACCACGAAGCTGCCAAAATTGAAGCCATCGACTTTACCAAAGCCAAACAGCGCGCTGATCCATccg                                                                                                                          >  1:139925/1‑140 (MQ=255)
          ttGTGCAATTTAAGCGTTAACTTTTAATCTTCCTGTAGATAAATAGCACGACAATCGCACCAATAACGGCAACCACGAAGCTGCCAAAATTGAAGCCATCGACTTTACCAAAGCCAAACAGCGCGCTGATCCATccgccg                                                                                                                       >  2:1336512/1‑140 (MQ=255)
             tgCAATTTAAGCGTTAACTTTTAATCTTCCTGTAGATAAATAGCACGACAATCGCACCAATAACGGCAACCACGAAGCTGCCAAAATTGAAGCCATCGACTTTACCAAAGCCAAACAGCGCGCTGATCCATCCGCCGACt                                                                                                                    <  1:540991/140‑1 (MQ=255)
             tgCAATTTAAGCGTTAACTTTTAATCTTCCTGTAGATAAATAGCACGACAATCGCACCAATAACGGCAACCACGAAGCTGCCAAAATTGAAGCCATCGACTTTACCAAAGCCAAACAGCGCGCTGATCCATCCGCCGACt                                                                                                                    <  2:632111/140‑1 (MQ=255)
              gCAATTTAAGCGTTAACTTTTAATCTTCCTGTAGATAAATAGCACGACAATCGCACCAATAACGGCAACCACGAAGCTGCCAAAATTGAAGCCATCGACTTTACCAAAGCCAAACAGCGCGCTGATCCATCCGCCGACTa                                                                                                                   <  2:730672/140‑1 (MQ=255)
                 aTTTAAGCGTTAACTTTTAATCTTCCTGTAGATAAATAGCACGACAATCGCACCAATAACGGCAACCACGAAGCTGCCAAAATTGAAGCCATCGACTTTACCAAAGCCAAACAGCGCGCTGATCCATCCGCCGACTACgg                                                                                                                >  1:38178/1‑140 (MQ=255)
                  tttAAGCGTTAACTTTTAATCTTCCTGTAGATAAATAGCACGACAATCGCACCAATAACGGCAACCACGAAGCTGCCAAAATTGAAGCCATCGACTTTACCAAAGCCAAACAGCGCGCTGATCCATCCGCCGACTACGGc                                                                                                               >  2:1425516/1‑140 (MQ=255)
                            aaCTTTTAATCTTCCTGTAGATAAATAGCACGACAATCGCACCAATAACGGCAACCACGAAGCTGCCAAAATTGAAGCCATCGACTTTACCAAAGCCAAACAGCGCGCTGATCCATCCGCCGACTACGGCACCGACTAt                                                                                                      >  2:84566/1‑139 (MQ=255)
                            aaCTTTTAATCTTCCTGTAGATAAATAGCACGACAATCGCACCAATAACGGCAACCACGAAGCTGCCAAAATTGAAGCCATCGACTTTACCAAAGCCAAACAGCGCGCTGATCCATCCGCCGACTACGGCACCGACTAt                                                                                                      <  1:84566/139‑1 (MQ=255)
                            aaCTTTTAATCTTCCTGTAGATAAATAGCACGACAATCGCACCAATAACGGCAACCACGAAGCTGCCAAAATTGAAGCCATCGACTTTACCAAAGCCAAACAGCGCGCTGATCCATCCGCCGACTACGGCACCGACTATc                                                                                                     >  2:1187499/1‑140 (MQ=255)
                            aaCTTTTAATCTTCCTGTAGATAAATAGCACGACAATCGCACCAATAACGGCAACCACGAAGCTGCCAAAATTGAAGCCATCGACTTTACCAAAGCCAAACAGCGCGCTGATCCATCCGCCGACTACGGCACCGACTATc                                                                                                     <  2:793122/140‑1 (MQ=255)
                            aaCTTTTAATCTTCCTGTAGATAAATAGCACGACAATCGCACCAATAACGGCAACCACGAAGCTGCCAAAATTGAAGCCATCGACTTTACCAAAGCCAAACAGCGCGCTGATCCATCCGCCGACTACGGCACCGACTATc                                                                                                     >  1:1040979/1‑140 (MQ=255)
                                 ttAATCTTCCTGTAGATAAATAGCACGACAATCGCACCAATAACGGCAACCACGAAGCTGCCAAAATTGAAGCCATCGACTTTACCAAAGCCAAACAGCGCGCTGATCCATCCGCCGACTACGGCACCGACTATCCCcag                                                                                                <  2:430070/140‑1 (MQ=255)
                                 ttAATCTTCCTGTAGATAAATAGCACGACAATCGCACCAATAACGGCAACCACGAAGCTGCCAAAATTGAAGCCATCGACTTTACCAAAGCCAAACAGCGCGCTGATCCATCCGCCGACTACGGCACCGACTATCCCcag                                                                                                >  1:504476/1‑140 (MQ=255)
                                 ttAATCTTCCTGTAGATAAATAGCACGACAATCGCACCAATAACGGCAACCACGAAGCTGCCAAAATTGAAGCCATCGACTTTACCAAAGCCAAACAGCGCGCTGATCCATCCGCCGACTACGGCACCGACTATCCCcag                                                                                                >  2:598658/1‑140 (MQ=255)
                                      cTTCCTGTAGATAAATAGCACGACAATCGCACCAATAACGGCAACCACGAAGCTGCCAAAATTGAAGCCATCGACTTTACCAAAGCCAAACAGCGCGCTGATCCATCCGCCGACTACGGCACCGACTATCCCCAGCAGGa                                                                                           <  1:610552/140‑1 (MQ=255)
                                      cTTCCTGTAGATAAATAGCACGACAATCGCACCAATAACGGCAACCACGAAGCTGCCAAAATTGAAGCCATCGACTTTACCAAAGCCAAACAGCGCGCTGATCCATCCGCCGACTACGGCACCGACTATCCCCAGCAGGa                                                                                           <  1:1425516/140‑1 (MQ=255)
                                      cTTCCTGTAGATAAATAGCACGACAATCGCACCAATAACGGCAACCACGAAGCTGCCAAAATTGAAGCCATCGACTTTACCAAAGCCAAACAGCGCGCTGATCCATCCGCCGACTACGGCACCGACTATCCCCAGCAGGa                                                                                           <  2:38178/140‑1 (MQ=255)
                                      cTTCCTGTAGATAAATAGCACGACAATCGCACCAATAACGGCAACCACGAAGCTGCCAAAATTGAAGCCATCGACTTTACCAAAGCCAAACAGCGCGCTGATCCATCCGCCGACTACGGCACCGACTATCCCCAGCAGGa                                                                                           <  2:504476/140‑1 (MQ=255)
                                      cTTCCTGTAGATAAATAGCACGACAATCGCACCAATAACGGCAACCACGAAGCTGCCAAAATTGAAGCCATCGACTTTACCAAAGCCAAACAGCGCGCTGATCCATCCGCCGACTACGGCACCGACTATCCCCAGCAGGa                                                                                           <  2:813078/140‑1 (MQ=255)
                                      cTTCCTGTAGATAAATAGCACGACAATCGCACCAATAACGGCAACCACGAAGCTGCCAAAATTGAAGCCATCGACTTTACCAAAGCCAAACAGCGCGCTGATCCATCCGCCGACTACGGCACCGACTATCCCCAGCAGGa                                                                                           <  1:1294454/140‑1 (MQ=255)
                                         ccTGTAGATAAATAGCACGACAATCGCACCAATAACGGCAACCACGAAGCTGCCAAAATTGAAGCCATCGACTTTACCAAAGCCAAACAGCGCGCTGATCCATCGGCCGACTACGGCACCGACTATCCCCAGCAGGATAg                                                                                        >  2:383420/1‑140 (MQ=255)
                                         ccTGTAGATAAATAGCACGACAATCGCACCAATAACGGCAACCACGAAGCTGCCAAAATTGAAGCCATCGACTTTACCAAAGCCAAACAGCGCGCTGATCCATCCGCCGACTACGGCACCGACTATCCCCAGCAGGATAg                                                                                        >  1:92338/1‑140 (MQ=255)
                                         ccTGTAGATAAATAGCACGACAATCGCACCAATAACGGCAACCACGAAGCTGCCAAAATTGAAGCCATCGACTTTACCAAAGCCAAACAGCGCGCTGATCCATCCGCCGACTACGGCACCGACTATCCCCAGCAGGATAg                                                                                        >  2:771277/1‑140 (MQ=255)
                                           tGTAGATAAATAGCACGACAATCGCACCAATAACGGCAACCACGAAGCTGCCAAAATTGAAGCCATCGACTTTACCAAAGCCAAACAGCGCGCTGATCCATCCGCCGACTACGGCACCGACTATCCCCAGCAGGATAGTc                                                                                      >  1:342444/1‑140 (MQ=255)
                                           tGTAGATAAATAGCACGACAATCGCACCAATAACGGCAACCACGAAGCTGCCAAAATTGAAGCCATCGACTTTACCAAAGCCAAACAGCGCGCTGATCCATCCGCCGACTACGGCACCGACTATCCCCAGCAGGATAGTc                                                                                      <  2:379034/140‑1 (MQ=255)
                                                   aaTAGCACGACAATCGCACCAATAACGGCAACCACGAAGCTGCCAAAATTGAAGCCATCGACTTTACCAAAGCCAAACAGCGCGCTGATCCATCCGCCGACTACGGCACCGACTATCCCCAGCAGGa                                                                                           >  2:1258635/1‑127 (MQ=255)
                                                   aaTAGCACGACAATCGCACCAATAACGGCAACCACGAAGCTGCCAAAATTGAAGCCATCGACTTTACCAAAGCCAAACAGCGCGCTGATCCATCCGCCGACTACGGCACCGACTATCCCCAGCAGGa                                                                                           <  1:472837/127‑1 (MQ=255)
                                                   aaTAGCACGACAATCGCACCAATAACGGCAACCACGAAGCTGCCAAAATTGAAGCCATCGACTTTACCAAAGCCAAACAGCGCGCTGATCCATCCGCCGACTACGGCACCGACTATCCCCAGCAGGa                                                                                           >  2:472837/1‑127 (MQ=255)
                                                   aaTAGCACGACAATCGCACCAATAACGGCAACCACGAAGCTGCCAAAATTGAAGCCATCGACTTTACCAAAGCCAAACAGCGCGCTGATCCATCCGCCGACTACGGCACCGACTATCCCCAGCAGGa                                                                                           <  1:1258635/127‑1 (MQ=255)
                                                    aTAGCACGACAATCGCACCAATAACGGCAACCACGAAGCTGCCAAAATTGAAGCCGTCGACTTTACCAAAGCCAAACAGCGCGCTGATCCATCCGCCGACTACGGCACCGACTATCCCCAGCAGGATAGTCATAAAGAAt                                                                             >  1:1104121/1‑140 (MQ=255)
                                                    aTAGCACGACAATCGCACCAATAACGGCAACCACGAAGCTGCCAAAATTGAAGCCATCGACTTTACCAAAGCCAAACAGCGCGCTGATCCATCCGCCGACTACGGCACCGACTATCCCCAGCAGGATAGTCATAAAGAAt                                                                             >  1:122848/1‑140 (MQ=255)
                                                       gCACGACAATCGCACCAATAACGGCAACCACGAAGCTGCCAAAATTGAAGCCATCGACTTTACCAAAGCCAAACAGCGCGCTGATCCATCCGCCGACTACGGCACCGACTATCCCCAGCAGGATAGTCATAAAGAATCCa                                                                          >  1:647366/1‑140 (MQ=255)
                                                       gCACGACAATCGCACCAATAACGGCAACCACGAAGCTGCCAAAATTGAAGCCATCGACTTTACCAAAGCCAAACAGCGCGCTGATCCATCCGCCGACTACGGCACCGACTATCCCCAGCAGGATAGTCATAAAGAATCCa                                                                          >  2:1347612/1‑140 (MQ=255)
                                                       gCACGACAATCGCACCAATAACGGCAACCACGAAGCTGCCAAAATTGAAGCCATCGACTTTACCAAAGCCAAACAGCGCGCTGATCCATCCGCCGACTACGGCACCGACTATCCCCAGCAGGATAGTCATAAAGAATCCa                                                                          >  2:65402/1‑140 (MQ=255)
                                                       gCACGACAATCGCACCAATAACGGCAACCACGAAGCTGCCAAAATTGAAGCCAGCGACTTTACCAAAGCCAAACAGCGCGCTGATCCATCCGCCGACTACGGCACCGACTATCCCCAGCAGGATAGTCATAAAGAATCCa                                                                          >  1:613689/1‑140 (MQ=255)
                                                         aCGACAATCGCACCAATAACGGCAACCACGAAGCTGCCAAAATTGAAGCCATCGACTTTACCAAAGCCAAACAGCGCGCTGATCCATCCGCCGACTACGGCACCGACTATCCCCAGCAGGATAGTCATAAAg                                                                                <  1:142043/132‑1 (MQ=255)
                                                         aCGACAATCGCACCAATAACGGCAACCACGAAGCTGCCAAAATTGAAGCCATCGACTTTACCAAAGCCAAACAGCGCGCTGATCCATCCGCCGACTACGGCACCGACTATCCCCAGCAGGATAGTCATAAAg                                                                                >  2:142043/1‑132 (MQ=255)
                                                         aCGACAATCGCACCAATAACGGCAACCACGAAGCTGCCAAAATTGAAGCCATCGACTTTACCAAAGCCAAACAGCGCGCTGATCCATCCGCCGACTACGGCACCGACTATCCCCAGCAGGATAGTCATAAAGAATCCAcc                                                                        >  2:394141/1‑140 (MQ=255)
                                                         aCGACAATCGCACCAATAACGGCAACCACGAAGCTGCCAAAATTGAAGCCATCGACTTTACCAAAGCCAAACAGCGCGCTGATCCATCCGCCGACTACGGCACCGACTATCCCCAGCAGGATAGTCATAAAGAATCCAcc                                                                        >  1:196749/1‑140 (MQ=255)
                                                         aCGACAATCGCACCAATAACGGCAACCACGAAGCTGCCAAAATTGAAGCCATCGACTTTACCAAAGCCAAACAGCGCGCTGATCCATCCGCCGACTACGGCACCGACTATCCCCAGCAGGATAGTCATAAAGAATCCAcc                                                                        >  1:1079881/1‑140 (MQ=255)
                                                          cGACAATCGCACCAATAACGGCAACCACGAAGCTGCCAAAATTGAAGCCATCGACTTTACCAAAGCCAAACAGCGCGCTGATCCATCCGCCGACTACGGCACCGACTATCCCCAGCAGGATAGTCATAAAGAATCCCCCt                                                                       <  2:1040979/140‑1 (MQ=255)
                                                          cGACAATCGCACCAATAACGGCAACCACGAAGCTGCCAAAATTGAAGCCATCGACTTTACCAAAGCCAAACAGCGCGCTGATCCATCCGCCGACTACGGCACCGACTATCCCCAGCAGGATAGTCATAAAGAATCCACCt                                                                       >  2:753277/1‑140 (MQ=255)
                                                          cGACAATCGCACCAATAACGGCAACCACGAAGCTGCCAAAATTGAAGCCATCGACTTTACCAAAGCCAAACAGCGCGCTGATCCATCCGCCGACTACGGCACCGACTATCCCCAGCAGGATAGTCATAAAGAATCCACCt                                                                       >  2:268319/1‑140 (MQ=255)
                                                          cGACAATCGCACCAATAACGGCAACCACGAAGCTGCCAAAATTGAAGCCATCGACTTTACCAAAGCCAAACAGCGCGCTGATCCATCCGCCGACTACGGCACCGACTATCCCCAGCAGGATAGTCATAAAGAATCCACCt                                                                       >  2:613470/1‑140 (MQ=255)
                                                          cGACAATCGCACCAATAACGGCAACCACGAAGCTGCCAAAATTGAAGCCATCGACTTTACCAAAGCCAAACAGCGCGCTGATCCATCCGCCGACTACGGCACCGACTATCCCCAGCAGGATAGTCATAAAGAATCCACCt                                                                       >  2:937700/1‑140 (MQ=255)
                                                          cGACAATCGCACCAATAACGGCAACCACGAAGCTGCCAAAATTGAAGCCATCGACTTTACCAAAGCCAAACAGCGCGCTGATCCATCCGCCGACTACGGCACCGACTATCCCCAGCAGGATAGTCATAAAGAATCCACCt                                                                       <  1:1397174/140‑1 (MQ=255)
                                                          cGACAATCGCACCAATAACGGCAACCACGAAGCTGCCAAAATTGAAGCCATCGACTTTACCAAAGCCAAACAGCGCGCTGATCCATCCGCCGACTACGGCACCGACTATCCCCAGCAGGATAGTCATAAAGAATCCACCt                                                                       <  1:1233076/140‑1 (MQ=255)
                                                              aaTCGCACCAATAACGGCAACCACGAAGCTGCCAAAATTGAAGCCATCGACTTTACCAAAGCCAAACAGCGCGCTGATCCATCCGCCGACTACGGCACCGACTATCCCCAGCAGGATAGTCATAAAGAATCCACCTCCAt                                                                   <  1:1336512/140‑1 (MQ=255)
                                                               aTCGCACCAATAACGGCAACCACGAAGCTGCCAAAATTGAAGCCATCGACTTTACCAAAGCCAAACAGCGCGCTGATCCATCCGCCGACTACGGCACCGACTATCCCCAGCAGGATAGTCATAAAGAATCCACCTCCATc                                                                  <  1:394141/140‑1 (MQ=255)
                                                                tCGCACCAATAACGGCAACCACGAAGCTGCCAAAATTGAAGCCATCGACTTTACCAAAGCCAAACAGCGCGCTGATCCATCCGCCGACTACGGCACCGACTATCCCCAGCAGGATAGTCATAAAGAATCCACCTCCATCt                                                                 <  1:358129/140‑1 (MQ=255)
                                                                    aCCAATAACGGCAACCACGAAGCTGCCAAAATTGAAGCCATCGACTTTACCAAAGCCAAACAGCGCGCTGATCCATCCGCCGACTACGGCACCGACTATCCCCAGCAGGATAGTCATAAAGAATCCTCCTCCATCTTTAc                                                             <  2:1275097/140‑1 (MQ=255)
                                                                    aCCAATAACGGCAACCACGAAGCTGCCAAAATTGAAGCCATCGACTTTACCAAAGCCAAACAGCGCGCTGATCCATCCGCCGACTACGGCACCGACTATCCCCAGCAGGATAGTCATAAAGAATCCACCTCCATCTTTAc                                                             <  1:613470/140‑1 (MQ=255)
                                                                    aCCAATAACGGCAACCACGAAGCTGCCAAAATTGAAGCCATCGACTTTACCAAAGCCAAACAGCGCGCTGATCCATCCGCCGACTACGGCACCGACTATCCCCAGCAGGATAGTCATAAAGAATCCACCTCCATCTTTAc                                                             <  1:65402/140‑1 (MQ=255)
                                                                    aCCAATAACGGCAACCACGAAGCTGCCAAAATTGAAGCCATCGACTTTACCAAAGCCAAACAGCGCGCTGATCCATCCGCCGACTACGGCACCGACTATCCCCAGCAGGATAGTCATAAAGAATCCACCTCCATCTTTAc                                                             <  2:546416/140‑1 (MQ=255)
                                                                    aCCAATAACGGCAACCACGAAGCTGCCAAAATTGAAGCCATCGACTTTACCAAAGCCAAACAGCGCGCTGATCCATCCGCCGACTACGGCACCGACTATCCCCAGCAGGATAGTCATAAAGAATCCACCTCCATCTTTAc                                                             <  2:1079881/140‑1 (MQ=255)
                                                                    aCCAATAACGGCAACCACGAAGCTGCCAAAATTGAAGCCATCGACTTTACCAAAGCCAAACAGCGCGCTGATCCATCCGCCGACTACGGCACCGACTATCCCCAGCAGGATAGTCATAAAGAATACACCTCCATCTTTAc                                                             <  2:342444/140‑1 (MQ=255)
                                                                       aaTAACGGCAACCACGAAGCTGCCAAAATTGAAGCCATCGACTTTACCAAAGCCAAACAGCGCGCTGATCCATCCGCCGACTACGGCACCGACTATCCCCAGCAGGATAGTCATAAAGAATCCACCTCCATCTTTACCTg                                                          <  1:1187499/140‑1 (MQ=255)
                                                                        aTAACGGCAACCACGAAGCTGCCAAAATTGAAGCCATCGACTTTACCAAAGCCAAACAGCGCGCTGATCCATCCGCCGACTACGGCACCGACTATCCCCAGCAGGATAGTCATAAAGATTCCACCTCCATCTTTACCTg                                                          <  1:1436787/139‑1 (MQ=255)
                                                                        aTAACGGCAACCACGAAGCTGCCAAAATTGAAGCCATCGACTTTACCAAAGCCAAACAGCGCGCTGATCCATCCGCCGACTACGGCACCGACTATCCCCAGCAGGATAGTCATAAAGATTCCACCTCCATCTTTACCTg                                                          >  2:1436787/1‑139 (MQ=255)
                                                                         tAACGGCAACCACGAAGCTGCCAAAATTGAAGCCGTCGACTTTACCAAAGCCAAACAGCGCGCTGATCCATCCGCCGACTACGGCACCGACTATCCCCAGCAGGATAGTCATAAAGAATCCACCTCCATCTTTACCTGGc                                                        <  2:1104121/140‑1 (MQ=255)
                                                                               cAACCACGAAGCTGCCAAAATTGAAGCCATCGACTTTACCAAAGCCAAACAGCGCGCTGATCCATCCGCCGACTACGGCACCGACTATCCCCAGCAGGATAGTCATAAAGAATCCACCTCCATCTTTACCTGGCATGATc                                                  <  2:139925/140‑1 (MQ=255)
                                                                                aaCCACGAAGCTGCCAAAATTGAAGCCATCGACTTTACCAAAGCCAAACAGCGCGCTGATCCATCCGCCGACTACGGCACCGACTATCCCCAGCAGGATAGTCATAAAGAATCCACCTCCATCTTTAcc                                                            >  2:13692/1‑129 (MQ=255)
                                                                                aaCCACGAAGCTGCCAAAATTGAAGCCATCGACTTTACCAAAGCCAAACAGCGCGCTGATCCATCCGCCGACTACGGCACCGACTATCCCCAGCAGGATAGTCATAAAGAATCCACCTCCATCTTTAcc                                                            <  1:13692/129‑1 (MQ=255)
                                                                                 aCCACGAAGCTGCCAAAATTGAGGCCATCGACTTTACCAAAGCCAAACAGCGCGCTGATCCATCCGCCGACTACGGCACCGACTATCCCCAGCAGGATAGTCATAAAGAATCCACCTCCATCTTTa                                                              >  1:557040/1‑126 (MQ=255)
                                                                                 aCCACGAAGCTGCCAAAATTGAGGCCATCGACTTTACCAAAGCCAAACAGCGCGCTGATCCATCCGCCGACTACGGCACCGACTATCCCCAGCAGGATAGTCATAAAGAATCCACCTCCATCTTTa                                                              <  2:557040/126‑1 (MQ=255)
                                                                                  ccACGAAGCTGCCAAAATTGAAGCCATCGACTTTACCAAAGCCAAACAGCGCGCTGATCCATCCGCCGACTACGGCACCGACTATCCCCAGCAGGATAGTCATAAAGAATCCACCTCCATCTTTACCTg                                                          <  2:157371/129‑1 (MQ=255)
                                                                                  ccACGAAGCTGCCAAAATTGAAGCCATCGACTTTACCAAAGCCAAACAGCGCGCTGATCCATCCGCCGACTACGGCACCGACTATCCCCAGCAGGATAGTCATAAAGAATCCACCTCCATCTTTACCTg                                                          >  1:157371/1‑129 (MQ=255)
                                                                                  ccACGAAGCTGCCAAAATTGAAGCCATCGACTTTACCAAAGCCAAACAGCGCGCTGATCCATCCGCCGACTACGGCACCGACTATCCCCAGCAGGATAGTCATAAAGAATCCACCTCCATCTTTACCTGGCATGATCCAc                                               <  2:122848/140‑1 (MQ=255)
                                                                                  ccACGAAGCTGCCAAAATTGAAGCCATCGACTTTACCAAAGCCAAACAGCGCGCTGATCCATCCGCCGACTACGGCACCGACTATCCCCAGCAGGATAGTCATAAAGAATCCACCTCCATCTTTACCTGGCATGATCCAc                                               >  2:400767/1‑140 (MQ=255)
                                                                                  ccACGAAGCTGCCAAAATTGAAGCCATCGACTTTACCAAAGCCAAACAGCGCGCTGATCCATCCGCCGACTACGGCACCGACTATCCCCAGCAGGATAGTCATAAAGAATCCACCTCCATCTTTACCTGGCATGATCCAc                                               >  1:605955/1‑140 (MQ=255)
                                                                                  ccACGAAGCTGCCAAAATTGAAGCCATCGACTTTACCAAAGCCAAACAGCGCGCTGATCCATCCGCCGACTACGGCACCGACTATCCCCAGCAGGATAGTCATAAAGAATCCACCTCCATCTTTACCTGGCATGATCCAc                                               >  1:866616/1‑140 (MQ=255)
                                                                                    aCGAAGCTGCCAAAATTGAAGCCATCGACTTTACCAAAGCCAAACAGCGCGCTGATCCATCCGCCGACTACGGCACCGACTATCCCCAGCAGGATAGTCATAAAGAATCCACCTCCATCTTTACCTGGCATGATCCACtt                                             <  2:757096/140‑1 (MQ=255)
                                                                                       aaGCTGCCAAAATTGAAGCCATCGACTTTACCAAAGCCAAACAGCGCGCTGATCCATCCGCCGACTACGGCACCGACTATCCCCAGCAGGATAGTCATAAAGAATCCACCTCCATCTTTACCTGGCATGATCCACTTCGc                                          <  2:196749/140‑1 (MQ=255)
                                                                                        aGCTGCCAAAATTGAAGCCATCGACTTTACCAAAGCCAAACAGCGCGCTGATCCATCCGCCGACTACGGCACCGACTATCCCCAGCAGGATAGTCATAAAGAATCCACCTCCATCTTTACCTGGCATGATCCACTTCGcc                                         <  2:866616/140‑1 (MQ=255)
                                                                                             ccAAAATTGAAGCCATCGACTTTACCAAAGCCAAACAGCGCGCTGATCCATCCGCCGACTACGGCACCGACTATCCCCAGCAGGATAGTCATAAAGAATCCACCTCCATCTTTACCTGGCATGATCCACTTCGCCAGAAt                                    >  2:1172685/1‑140 (MQ=255)
                                                                                             ccAAAATTGAAGCCATCGACTTTACCAAAGCCAAACAGCGCGCTGATCCATCCGCCGACTACGGCACCGACTATCCCCAGCAGGATAGTCATAAAGAATCCACCTCCATCTTTACCTGGCATGATCCACTTCGCCAGAAt                                    >  1:279206/1‑140 (MQ=255)
                                                                                                    tGAAGCCATCGACTTTACCAAAGCCAAACAGCGCGCTGATCCATCCGCCGACTACGGCACCGACTATCCCCAGCAGGATAGTCATAAAGAATCCACCTCCATCTTTACCTGGCATGATCCACTTCGCCa                                        >  1:573749/1‑129 (MQ=255)
                                                                                                    tGAAGCCATCGACTTTACCAAAGCCAAACAGCGCGCTGATCCATCCGCCGACTACGGCACCGACTATCCCCAGCAGGATAGTCATAAAGAATCCACCTCCATCTTTACCTGGCATGATCCACTTCGCCa                                        <  2:573749/129‑1 (MQ=255)
                                                                                                    tGAAGCCATCGACTTTACCAAAGCCAAACAGCGCGCTGATCCATCCGCCGACTACGGCACCGACTATCCCCAGCAGGATAGTCATAAAGAATCCACCTCCATCTTTACCTGGCATGATCCACTTCGCCAGAATACCGGCa                             >  2:390241/1‑140 (MQ=255)
                                                                                                       aGCCATCGACTTTACCAAAGCCAAACAGCGCGCTGATCCATCGGCCGACTACGGCACCGACTATCCCCAGCAGGATAGTCATAAAGAATCCTCCTCCATCTTTACCTGGCATGATCCACTTCGCCAGAATACCGGCAATa                          <  1:383420/140‑1 (MQ=255)
                                                                                                       aGCCATCGACTTTACCAAAGCCAAACAGCGCGCTGATCCATCCGCCGACTACGGCACCGACTATCCCCAGCAGGATAGTCATAAAGAATCCACCTCCATCTTTACCTGGCATGATCCACTTCGCCAGAATAcc                                 <  2:1157950/133‑1 (MQ=255)
                                                                                                       aGCCATCGACTTTACCAAAGCCAAACAGCGCGCTGATCCATCCGCCGACTACGGCACCGACTATCCCCAGCAGGATAGTCATAAAGAATCCACCTCCATCTTTACCTGGCATGATCCACTTCGCCAGAATAcc                                 >  1:1157950/1‑133 (MQ=255)
                                                                                                           aTCGACTTTACCAAAGCCAAACAGCGCGCTGATCCATCGGCCGACTACGGCACCGACTATCCCCAGCAGGATAGTCATAAAGAATCCACCTCCATCTTTACCTGGCATGATCCACTTCGCCAGAATACCGGCAATAAGcc                      >  1:996911/1‑140 (MQ=255)
                                                                                                           aTCGACTTTACCAAAGCCAAACAGCGCGCTGATCCATCCGCCGACTACGGCACCGACTATCCCCAGCAGGATAGTCATAAAGAATCCACCTCCATCTTTACCTGGCATGATCCACTTCGCCAGAATACCGGCAATAAGcc                      >  2:762844/1‑140 (MQ=255)
                                                                                                            tCGACTTTACCAAAGCCAAACAGCGCGCTGATCCATCCGCCGACTACGGCACCGACTATCCCCAGCAGGATAGTCATAAAGAATCCACCTCCATCTTTACCTGGCATGATCCACTTCGCCAGAATACCGGCAATAAGccc                     <  1:400767/140‑1 (MQ=255)
                                                                                                            tCGACTTTACCAAAGCCAAACAGCGCGCTGATCCATCCGCCGACTACGGCACCGACTATCCCCAGCAGGATAGTCATAAAGAATCCACCTCCATCTTTACCTGGCATGATCCACTTCGCCAGAATACCGGCAATAAGccc                     <  1:771277/140‑1 (MQ=255)
                                                                                                                 tttACCAAAGCCAAACAGCGCGCTGATCCATCCGCCGACTACGGCACCGACTATCCCCAGCAGGATAGTCATAAAGAATCCACCTCCATCTTTACCTGGCATGATCCACTTCGCCAGAATACCGGCAATAAGCCCaaaaa                <  2:613689/140‑1 (MQ=255)
                                                                                                                         aGCCAAACAGCGCGCTGATCCATCCGCCGACTACGGCACCGACTATCCCCAGCAGGATAGTCATAAAGAATCCACCTCCATCTTTACCTGGCATGATCCACTTCGCCAGAATACCGGCAATAAGCCCAAAAATAATCCAt        <  1:762844/140‑1 (MQ=255)
                                                                                                                               aCAGCGCGCTGATCCATCCGCCGACTACGGCACCGACTATCCCCAGCAGGATAGTCATAAAGAATCCACCTCCATCTTTACCTGGCATGATCCACTTCGCCAGAATACCGGCAATAAGCCCAAAAATAATCCATGACAGa  <  1:840340/140‑1 (MQ=255)
                                                                                                                                     |                                                                                                                                     
TGTGCAGCCTTTGTGCAATTTAAGCGTTAACTTTTAATCTTCCTGTAGATAAATAGCACGACAATCGCACCAATAACGGCAACCACGAAGCTGCCAAAATTGAAGCCATCGACTTTACCAAAGCCAAACAGCGTGCTGATCCATCCGCCGACTACGGCACCGACTATCCCCAGCAGGATAGTCATAAAGAATCCACCTCCATCTTTACCTGGCATGATCCACTTCGCCAGAATACCGGCAATAAGCCCAAAAATAATCCATGACAGA  >  NC_000913/1878981‑1879247

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A