Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A9 F28 I1 R1
|
151 |
87.4 |
2971636 |
99.2% |
2947862 |
138.5 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,612,831 |
T→C |
V311A (GTT→GCT) |
hyfR → |
DNA‑binding transcriptional activator HyfR |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,612,831 | 0 | T | C | 100.0%
| 390.2
/ NA
| 108 | V311A (GTT→GCT) | hyfR | DNA‑binding transcriptional activator HyfR |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (57/51); total (57/51) |
Only 100 of 109 total aligned reads displayed.
TCTGCGCTCCTTATACCGCTTACCTTTGGCAACCATACACCGGGTGCATTGTTGCTGGCGCATACCTCTTCCACTCTCTTTAGTGAGGAAAACTGCCAGCTACTACAACACATAGCCGATCGCATCGCTATTGCCGTTGGCAATGCCGATGCCTGGCGTAGCATGACCGATTTGCAGGAAAGTTTGCAGCAAGAAAACCACCAGCTTAGCGAGCAGCTCCTTTCGAATCTGGGCATCGGTGACATTATCTATCAAAGCCAGGCAATGGAAGAC > NC_000913/2612695‑2612967
|
tCTGCGCTCCTTATACCGCTTACCTTTGGCAACCATACACCGGGTGCATTGTTGCTGGCGCATACCTCTTCCACTCTCTTTAGTGAGGAAAACTGCCAGCTACTACAACACATAGCCGATCGCATCGCTATTGCCGCTgg < 2:1061713/140‑1 (MQ=255)
ccTTATACCGCTTACCTTTGGCAACCATACACCGGGTGCATTGTTGCTGGCGCATACCTCTTCCACTCTCTTTAGTGAGGAAAACTGCCAGCTACTACAACACATAGCCGATCGCATCGCTATTGCCGCTGGCAATGCCg < 1:737411/140‑1 (MQ=255)
ataCCGCTTACCTTTGGCAACCATACACCGGGTGCATTGTTGCTGGCGCATACCTCTTCCACTCTCTTTAGTGAGGAAAACTGCCAGCTACTACAACACATAGCCGATCGCATCGCTATTGCCGCTGGCAATGCCGATGc < 1:346775/140‑1 (MQ=255)
ataCCGCTTACCTTTGGCAACCATACACCGGGTGCATTGTTGCTGGCGCATACCTCTTCCACTCTCTTTAGTGAGGAAAACTGCCAGCTACTACAACACATAGCCGATCGCATCGCTATTGCCGCTGGCAATGCCGATGc < 2:892648/140‑1 (MQ=255)
gCTTACCTTTGGCAACCATACACCGGGTGCATTGTTGCTGGCGCATACCTCTTCCACTCTCTTTAGTGAGGAAAACTGCCAGCTACTACAACACATAGCCGATCGCATCGCTATTGCCGCTGGCAATGCCGATGCCTGGc > 2:1342697/1‑140 (MQ=255)
ttACCTTTGGCAACCCTACACCGGGTGCATTGTTGCTCGCGCATACCTCTTCCACTCTCTTTAGTGTGGAAAACTGCCAGCTACTACACCACATAGCCGATCGCATCGCTATTGCCGCTGGCAATGCCGATGCCTGGCGt > 1:585831/1‑140 (MQ=255)
ttACCTTTGGCAACCATACACCGGGTGCATTGTTGCTGGCGCATACCTCTTCCACTCTCTTTAGTGAGGAAAACTGCCAGCTACTACAACACATAGCCGATCGCATCGCTATTGCCGCTGGCAATGCCGATGc > 1:122918/1‑133 (MQ=255)
ttACCTTTGGCAACCATACACCGGGTGCATTGTTGCTGGCGCATACCTCTTCCACTCTCTTTAGTGAGGAAAACTGCCAGCTACTACAACACATAGCCGATCGCATCGCTATTGCCGCTGGCAATGCCGATGc < 2:122918/133‑1 (MQ=255)
ttACCTTTGGCAACCATACACCGGGTGCATTGTTGCTGGCGCATACCTCTTCCACTCTCTTTAGTGAGGAAAACTGCCAGCTACTACAACACATAGCCGATCGCATCGCTATTGCCGCTGGCAATGCCGATGc < 2:1374309/133‑1 (MQ=255)
ttACCTTTGGCAACCATACACCGGGTGCATTGTTGCTGGCGCATACCTCTTCCACTCTCTTTAGTGAGGAAAACTACCAGCTACTACAACACATAGCCGATCGCATCGCTATTGCCGCTGGCAATGCCGATGc > 1:1374309/1‑133 (MQ=255)
aCCTTTGGCAACCATACACCGGGTGCATTGTTGCTGGCGCATACCTCTTCCACTCTCTTTAGTGAGGAAAACTGCCAGCTACTACAACACATAGCCGATCGCATCGCTATTGCCGCTGGCAATGCCGATGcc > 2:671846/1‑132 (MQ=255)
aCCTTTGGCAACCATACACCGGGTGCATTGTTGCTGGCGCATACCTCTTCCACTCTCTTTAGTGAGGAAAACTGCCAGCTACTACAACACATAGCCGATCGCATCGCTATTGCCGCTGGCAATGCCGATGcc < 1:671846/132‑1 (MQ=255)
aCCTTTGGCAACCATACACCGGGTGCATTGTTGCTGGCGCATACCTCTTCCACTCTCTTTAGTGAGGAAAACTGCCAGCTACTACAACACATAGCCGATCGCATCGCTATTGCCGCTGGCAATGCCGATGc > 1:405949/1‑131 (MQ=255)
aCCTTTGGCAACCATACACCGGGTGCATTGTTGCTGGCGCATACCTCTTCCACTCTCTTTAGTGAGGAAAACTGCCAGCTACTACAACACATAGCCGATCGCATCGCTATTGCCGCTGGCAATGCCGATGc < 2:405949/131‑1 (MQ=255)
aCCTTTGGCAACCATACACCGGGTGCATTGTTGCTGGCGCATACCTCTTCCACTCTCTTTAGTGAGGAAAACTGCCAGCTACTACAACACATAGCCGATCGCATCGCTATTGCCGCTGGCAATGCCGATGCCTGGCGTAg > 2:332043/1‑140 (MQ=255)
acacCGGGTGCATTGTTGCTGGCGCATACCTCTTCCACTCTCTTTAGTGAGGAAAACTGCCAGCTACTGCAACACATAGCCGATCGCATCGCTATTGCCGCTGGCAATGCCGATGCCTGGCGTAGCATGACCGATTTGCa < 1:1040205/140‑1 (MQ=255)
acacCGGGTGCATTGTTGCTGGCGCATACCTCTTCCACTCTCTTTAGTGAGGAAAACTGCCAGCTACTACAACACATAGCCGATCGCATCGCTATTGCCGCTGGCAATGCCGATGCCTGGCGTAGCATGACCGATTTGCa < 1:1060320/140‑1 (MQ=255)
ggTGCATTGTTGCTGGCGCATACCTCTTCCACTCTCTTTAGTGAGGAAAACTGCCAGCTACTACAACACATAGCCGATCGCATCGCTATTGCCGCTGGCAATGCCGATGCCTGGCGTAGCATGACCGAt < 2:1106743/129‑1 (MQ=255)
ggTGCATTGTTGCTGGCGCATACCTCTTCCACTCTCTTTAGTGAGGAAAACTGCCAGCTACTACAACACATAGCCGATCGCATCGCTATTGCCGCTGGCAATGCCGATGCCTGGCGTAGCATGACCGAt > 1:1106743/1‑129 (MQ=255)
ggTGCATTGTTGCTGGCGCATACCTCTTCCACTCTCTTTAGTGAGGAAAACTGCCAGCTACTACAACACATAGCCGATCGCATCGCTATTGCCGCTGGCAATGCCGATGCCTGGCGTAGCATGACCGATTTGCAGGAAAg > 2:908208/1‑140 (MQ=255)
gCATTGTTGCTGGCGCATACCTCTTCCACTCTCTTTAGTGAGGAAAACTGCCAGCTACTACAACACATAGCCGATCGCATCGCTATTGCCGCTGGCAATGCCGATGCCTGGCGTAGCATGACCGATTTGCAGGAAAGttt > 1:347638/1‑140 (MQ=255)
cATTGTTGCTGGCGCATACCTCTTCCACTCTCTTTAGTGAGGAAAACTGCCAGCTACTACAACACATAGCCGATCGCATCGCTATTGCCGCTGGCAATGCCGATGCCTGGCGTAGCATGACCGATTTGCAGGAAAGTTTg > 1:149753/1‑140 (MQ=255)
aTTGTTGCTGGCGCATACCTCTTCCACTCTCTTTAGTGAGGAAAACTGCCAGCTACTACAACACATAGCCGATCGCATCGCTATTGCCGCTGGCAATGCCGATGCCTGGCGTAGCATGACCGATTTGCAGGAAAGTTTgc < 1:718111/140‑1 (MQ=255)
aTTGTTGCTGGCGCATACCTCTTCCACTCTCTTTAGTGAGGAAAACTGCCAGCTACTACAACACATAGCCGATCGCATCGCTATTGCCGCTGGCAATGCCGATGCCTGGCGTAGCATGACCGATTTGCAGGAAAGTTTgc > 2:400730/1‑140 (MQ=255)
aTTGTTGCTGGCGCATACCTCTTCCACTCTCTTTAGTGAGGAAAACTGCCAGCTACTACAACACATAGCCGATCGCATCGCTATTGCCGCTGGCAATGCCGATGCCTGGCGTAGCATGACCGATTTGCAGGAAAGTTTgc > 2:441866/1‑140 (MQ=255)
ttgCTGGCGCATACCTCTTCCACTCTCTTTAGTGAGGAAAACTGCCAGCTACTACAACACATAGCCGATCGCATCGCTATTGCCGCTGGCAATGCCGATGCCTGGCGTAGCATGACCGATTTGCAGGAAAGTTTgcagca < 2:347638/140‑1 (MQ=255)
tgCTGGCGCATACCTCTTCCACTCTCTTTAGTGAGGAAAACTGCCAGCTACTACAACACATAGCCGATCGCATCGCTATTGCCGCTGGCAATGCCGATGCCTGGCGTAGCATGACCGATTTGCAGGAAAGTTTGCAGCaa > 1:372798/1‑140 (MQ=255)
cTGGCGCATACCTCTTCCACTCTCTTTAGTGAGGAAAACTGCCAGCTACTACAACACATAGCCGATCGCATCGCTATTGCCGCTGGCAATGCCGATGCCTGGCGTAGCATGACCGATTTGCAGGAAAGTTTGCAGCAAGa > 2:381796/1‑140 (MQ=255)
ggCGCATACCTCTTCCACTCTCTTTAGTGAGGAAAACTGCCAGCTACTACAACACATAGCCGATCGCATCGCTATTGCCGCTGGCAATGCCGATGCCTGGCGTAGCATGACCGATTTGCAGGAAAGTTTGCAGCAAGaaa > 1:638970/1‑140 (MQ=255)
cgcATACCTCTTCCACTCTCTTTAGTGAGGAAAACTGCCAGCTACTACAACACATAGCCGATCGCATCGCTATTGCCGCTGGCAATGCCGATGCCTGGCGTAGCATGACCGATTTGCAGGAAAGTTTgc > 2:102752/1‑129 (MQ=255)
cgcATACCTCTTCCACTCTCTTTAGTGAGGAAAACTGCCAGCTACTACAACACATAGCCGATCGCATCGCTATTGCCGCTGGCAATGCCGATGCCTGGCGTAGCATGACCGATTTGCAGGAAAGTTTgc < 1:102752/129‑1 (MQ=255)
cgcATACCTCTTCCACTCTCTTTAGTGAGGAAAACTGCCAGCTACTACAACACATAGCCGATCGCATCGCTATTGCCGCTGGCAATGCCGATGCCTGGCGTAGCATGACCGATTTGCAGGAAAGTTTGCAGCAAGAAAac < 2:787345/140‑1 (MQ=255)
cATACCTCTTCCACTCTCTTTAGTGAGGAAAACTGCCAGCTACTACAACACATAGCCGATCGCATCGCTATTGCCGCTGGCAATGCCGATGCCTGGCGTAGCATGACCGATTTGCAGGAAAGTTTGCAGCAAGAAAacca < 1:332043/140‑1 (MQ=255)
aTACCTCTTCCACTCTCTTTAGTGAGGAAAACTGCCAGCTACTACAACACATAGCCGATCGCATCGCTATTGCCGCTGGCAATGCCGATGCCTGGCGTAGCATGACCGATTTGCAGGAAAGTTTGCAGCAAGAAAaccac > 2:1258832/1‑140 (MQ=255)
aTACCTCTTCCACTCTCTTTAGTGAGGAAAACTGCCAGCTACTACAACACATAGCCGATCGCATCGCTATTGCCGCTGGCAATGCCGATGCCTGGCGTAGCATGACCGATTTGCAGGAAAGTTTGCAGCAAGAAAaccac > 1:172463/1‑140 (MQ=255)
tACCTCTTCCACTCTCTTTAGTGAGGAAAACTGCCAGCTACTACAACACATAGCCGATCGCATCGCTATTGCCGCTGGCAATGCCGATGCCTGGCGTAGCATGACCGATTTGCAGGAAAGTTTGCAGCAAGAAAaccacc > 2:129037/1‑140 (MQ=255)
aCCTCTTCCACTCTCTTTAGTGAGGAAAACTGCCAGCTACTACAACACATAGCCGATCGCATCGCTATTGCCGCTGGCAATGCCGATGCCTGGCGTAGCATGACCGATTTGCAGGAAAGTTTGCAGCAGGAAAAccacca > 2:473405/1‑140 (MQ=255)
ctTCCACTCTCTTTAGTGAGGAAAACTGCCAGCTACTACAACACATAGCCGATCGCATCGCTATTGCCGCTGGCAATGCCGATACCTGGCGTAGCATGACCGATTTGCAGGAAAGTTTGCAGCAAGAAAACCACCAGCtt > 1:1033754/1‑140 (MQ=255)
ttCCACTCTCTTTAGTGAGGAAAACTGCCAGCTACTACAACACATAGCCGATCGCATCGCTATTGCCGCTGGCAATGCCGATGCCTGGCGTAGCATGACCGATTTGCAGGAAAGTTTGCAGCAAGAAAACCACCAGCTTa > 1:1068851/1‑140 (MQ=255)
ttCCACTCTCTTTAGTGAGGAAAACTGCCAGCTACTACAACACATAGCCGATCGCATCGCTATTGCCGCTGGCAATGCCGATGCCTGGCGTAGCATGACCGATTTGCAGGAAAGTTTGCAGCAAGAAAACCACCAGCTTa < 1:441866/140‑1 (MQ=255)
ctctctTTAGTGAGGAAAACTGCCAGCTACTACAACACATAGCCGATCGCATCGCTATTGCCGCTGGCAATGCCGATGCCTGGCGTAGCATGACCGATTTGCAGGAAAGTTTGCAGCAAGAAAACCACCAGCTTAGCGag > 2:691820/1‑140 (MQ=255)
ctctctTTAGTGAGGAAAACTGCCAGCTACTACAACACATAGCCGATCGCATCGCTATTGCCGCTGGCAATGCCGATGCCTGGCGTAGCATGACCGATTTGCAGGAAAGTTTGCAGCAAGAAAACCACCAGCTTAGCGag > 1:127285/1‑140 (MQ=255)
ctctctTTAGTGAGGAAAACTGCCAGCTACTACAACACATAGCCGATCGCATCGCTATTGCCGCTGGCAATGCCGATGCCTGGCGTAGCATGACCGATTTGCAGGAAAGTTTGCAGCAAGAAAACCACCAGCTTAGCGag > 1:1416002/1‑140 (MQ=255)
ctctctTTAGTGAGGAAAACTGCCAGCTACTACAACACATAGCCGATCGCATCGCTATTGCCGCTGGCAATGCCGATGCCTGGCGTAGCATGACCGATTTGCAGGAAAGTTTGCAGCAAGAAAACCACCAGCTTAGCGag > 2:296440/1‑140 (MQ=255)
ctctctTTAGTGAGGAAAACTGCCAGCTACTACAACACATAGCCGATCGCATCGCTATTGCCGCTGGCAATGCCGATGCCTGGCGTAGCATGACCGATTTGCAGGAAAGTTTGCAGCAAGAAAACCACCAGCTTAGCGag > 1:925455/1‑140 (MQ=255)
ctctTTAGTGAGGAAAACTGCCAGCTACTACAACACATAGCCGATCGCATCGCTATTGCCGCTGGCAATGCCGATGCCTGGCGTAGCATGACCGATTTGCAGGAAAGTTTGCAGCAAGAAAACCACCAGCTTAGCGagca > 1:1036750/1‑140 (MQ=255)
tctTTAGTGAGGAAAACTGCCAGCTACTACAACACATAGCCGATCGCATCGCTATTGCCGCTGGCAATGCCGATGCCTGGCGTAGCATGACCGATTTGCAGGAAAGTTTGCAGCAAGAAAACCACCAGCTTAGCGagcag < 2:635824/140‑1 (MQ=255)
tctTTAGTGAGGAAAACTGCCAGCTACTACAACACATAGCCGATCGCATCGCTATTGCCGCTGGCAATGCCGATGCCTGGCGTAGCATGACCGATTTGCAGGAAAGTTTGCAGCAAGAAAACCACCAGCTTAGCGagcag > 2:1179139/1‑140 (MQ=255)
tttAGTGAGGAAAACTGCCAGCTACTACAACACATAGCCGATCGCATCGCTATTGCCGCTGGCAATGCCGATGCCTGGCGTAGCATGACCGATTTGCAGGAAAGTTTGCAGCAAGAAAACCACCAGCTTAGCGAGCAGCt < 2:372798/140‑1 (MQ=255)
tttAGTGAGGAAAACTGCCAGCTACTACAACACATAGCCGATCGCATCGCTATTGCCGCTGGCAATGCCGATGCCTGGCGTAGCATGACCGATTTGCAGGAAAGTTTGCAGCAAGAAAACCACCAGCTTAGCGAGCAGCt < 1:938370/140‑1 (MQ=255)
tttAGTGAGGAAAACTGCCAGCTACTACAACACATAGCCGATCGCATCGCTATTGCCGCTGGCAATGCCGATGCCTGGCGTAGCATGACCGATTTGCAGGAAAGTTTGCAGCAAGAAAACCACCAGCTTAGCGAGCAGCt > 1:236014/1‑140 (MQ=255)
ttAGTGAGGAAAACTGCCAGCTACTACAACACATAGCCGATCGCATCGCTATTGCCGCTGGCAATGCCGATGCCTGGCGTAGCATGACCGATTTGCAGGAAAGTTTGCAGCAAGAAAACCACCAGCTTAGCGAGCAGCTc > 1:575991/1‑140 (MQ=255)
tGAGGAAAACTGCCAGCTACTACAACACATAGCCGATCGCATCGCTATTGCCGCTGGCAATGCCGATGCCTGGCGTAGCATGACCGATTTGCAGGAAAGTTTGCAGCAAGAAAACCACCAGCTTAGCGAGCAGCTCCttt > 2:188243/1‑140 (MQ=255)
tGAGGAAAACTGCCAGCTACTACAACACATAGCCGATCGCATCGCTATTGCCGCTGGCAATGCCGATGCCTGGCGTAGCATGACCGATTTGCAGGAAAGTTTGCAGCAAGAAAACCACCAGCTTAGCGAGCAGCTCCttt < 2:638970/140‑1 (MQ=255)
aGGAAAACTGCCAGCTACTACAACACATAGCCGATCGCATCGCTATTGCCGCTGGCAATGCCGATGCCTGGCGTAGCATGACCGATTTGCAGGAAAGTTTGCAGCAAGAAAACCACCAGCTTAGCGAGCAGCTCCTTTCg < 2:1416002/140‑1 (MQ=255)
aGGAAAACTGCCAGCTACTACAACACATAGCCGATCGCATCGCTATTGCCGCTGGCAATGCCGATGCCTGGCGTAGCATGACCGATTTGCAGGAAAGTTTGCAGCAAGAAAACCACCAGCTTAGCGAGCAGCTCCTTTCg < 2:127285/140‑1 (MQ=255)
ggAAAACTGCCAGCTACTACAACACATAGCCGATCGCATCGCTATTGCCGCTGGCAATGCCGATGCCTGGCGTAGCATGACCGATTTGCAGGAAAGTTTGCAGCAAGAAAACCACCAGCTTAGCGAGCAGCTCCTTTCGa > 1:1096003/1‑140 (MQ=255)
ggAAAACTGCCAGCTACTACAACACATAGCCGATCGCATCGCTATTGCCGCTGGCAATGCCGATGCCTGGCGTAGCATGACCGATTTGCAGGAAAGTTTGCAGCAAGAAAACCACCAGCTTAGCGAGCAGCTCCTTTCGa > 2:11464/1‑140 (MQ=255)
ggAAAACTGCCAGCTACTACAACACATAGCCGATCGCATCGCTATTGCCGCTGGCAATGCCGATGCCTGGCGTAGCATGACCGATTTGCAGGAAAGTTTGCAGCAAGAAAACCACCAGCTTAGCGAGCAGCTCCTTTCGa > 1:1409540/1‑140 (MQ=255)
aaaaCTGCCAGCTACTACAACACATAGCCGATCGCATCGCTATTGCCGCTGGCAATGCCGATGCCTGGCGTAGCATGACCGATTTGCAGGAAAGTTTGCAGCAAGAAAACCACCAGCTTAGCGAGCAGCTCCTTTCGAAt > 1:457409/1‑140 (MQ=255)
aaaaCTGCCAGCTACTACAACACATAGCCGATCGCATCGCTATTGCCGCTGGCAATGCCGATGCCTGGCGTAGCATGACCGATTTGCAGGAAAGTTTGCAGCAAGAAAACCACCAGCTTAGCGAGCAGCTCCTTTCGAAt < 1:544790/140‑1 (MQ=255)
aaaaCTGCCAGCTACTACAACACATAGCCGATCGCATCGCTATTGCCGCTGGCAATGCCGATGCCTGGCGTAGCATGACCGATTTGCAGGAAAGTTTGCAGCAAGAAAACCACCAGCTTAGCGAGCAGCTCCTTTCGAAt > 2:544790/1‑140 (MQ=255)
tGCCAGCTACTACAACACATAGCCGATCGCATCGCTATTGCCGCTGGCAATGCCGATACCTGGCGTAGCATGACCGATTTGCAGGAAAGTTTGCAGCAAGAAAACCACCAGCTTAGCGAGCAGCTCCTTTCGAATCTggg < 2:1033754/140‑1 (MQ=255)
gCCAGCTACTACAACACATAGCCGATCGCATCGCTATTGCCGCTGGCAATGCCGATGCCTGGCGTAGCATGACCGATTTGCAGGAAAGTTTGCAGCAAGAAAACCACCAGCTTAGCGAGCAGCTCCTTTCGAATCTGGGc < 2:149753/140‑1 (MQ=255)
cAGCTACTACAACACATAGCCGATCGCATCGCTATTGCCGCTGGCAATGCCGATGCCTGGCGTAGCATGACCGATTTGCAGGAAAGTTTGCAGCAAGAAAACCACCAGCTTAGCGAGCAGCTCCTTTCGAATCTGGGCAt < 1:11464/140‑1 (MQ=255)
cAGCTACTACAACACATAGCCGATCGCATCGCTATTGCCGCTGGCAATGCCGATGCCTGGCGTAGCATCACCGATTTGCAGGAAAGTTTGCAGCAAGAAAACCACCAGCTTAGCGAGCAGCTCCTTTCGAATCTGGGCAt < 2:1036750/140‑1 (MQ=255)
aGCTACTCCAACACATAGCCGATCGCATCGCTATTGCCGCTGGCAATGCCGATGCCTGGCGTAGCATGACCGATTTGCAGGAAAGTTTGCAGCAAGAAAACCACCAGCTTAGCGAGCAGCTCCTTTCGAATCTGGGCATc < 2:1276504/140‑1 (MQ=255)
aGCTACTACAACACATAGCCGATCGCATCGCTATTGCCGCTGGCAATGCCGATGCCTGGCGTAGCATGACCGATTTGCAGGAAAGTTTGCAGCAAGAAAACCACCAGCTTAGCGAGCAGCTCCTTTCGAATCTGGGCATc < 1:296440/140‑1 (MQ=255)
gCTACTACAACACATAGCCGATCGCATCGCTATTGCCGCTGGCAATGCCGATGCCTGGCGTAGCATGACCGATTTGCAGGAAAGTTTGCAGCAAGAAAACCACCAGCTTAGCGAGCAGCTCCTTTCGAATCTGGGCATCg < 1:400730/140‑1 (MQ=255)
ctacAACACATAGCCGATCGCATCGCTATTGCCGCTGGCAATGCCGATGCCTGGCGTAGCATGACCGATTTGCAGGAAAGTTTGCAGCAAGAAAACCACCAGCTTAGCGAGCAGCTCCTTTCGAATCTGGGCATCGGTGa < 2:339875/140‑1 (MQ=255)
ctacAACACATAGCCGATCGCATCGCTATTGCCGCTGGCAATGCCGATGCCTGGCGTAGCATGACCGATTTGCAGGAAAGTTTGCAGCAAGAAAACCACCAGCTTAGCGAGCAGCTCCTTTCGAATCTGGGCATCGGTGa < 2:746460/140‑1 (MQ=255)
acaacaCATAGCCGATCGCATCGCTATTGCCGCTGGCAATGCCGATGCCTGGCGTAGCATGACCGATTTGCAGGAAAGTTTGCAGCAAGAAAACCACCAGCTTAGCGAGCAGCTCCTTTCGAATCTGGGCATCGGTGACa < 1:654905/140‑1 (MQ=255)
acaacaCATAGCCGATCGCATCGCTATTGCCGCTGGCAATGCCGATGCCTGGCGTAGCATGACCGATTTGCAGGAAAGTTTGCAGCAAGAAAACCACCAGCTTAGCGAGCAGCTCCTTTCGAATCTGGGCATCGGTGACa < 2:1096003/140‑1 (MQ=255)
acaTAGCCGATCGCATCGCTATTGCCGCTGGCAATGCCGATGCCTGGCGTAGCATGACCGATTTGCAGGAAAGTTTGCAGCAAGAAAACCACCAGCTTAGCGAGCAGCTCCTTTCGAATCTGGGCAt < 1:1128497/127‑1 (MQ=255)
acaTAGCCGATCGCATCGCTATTGCCGCTGGCAATGCCGATGCCTGGCGTAGCATGACCGATTTGCAGGAAAGTTTGCAGCAAGAAAACCACCAGCTTAGCGAGCAGCTCCTTTCGAATCTGGGCAt > 2:1128497/1‑127 (MQ=255)
caTAGCCGATCGCATCGCTATTGCCGCTGGCAATGCCGATGCCTGGCGTAGCATGACCGATTTGCAGGAAAGTTTGCAGCAAGAAAACCACCAGCTTAGCGAGCAGCTCCTTTCGAATCTGGGCATCGGTGACATtatct > 1:574230/1‑140 (MQ=255)
aGCCGATCGCATCGCTATTGCCGCTGGCAATGCCGATGCCTGGCGTAGCATGACCGATTTGCAGGAAAGTTTGCAGCAAGAAAACCACCAGCTTAGCGAGCAGCTCCTTTCGAATCTGGGCATCGGTGACATtatgtatc > 2:1369371/1‑140 (MQ=255)
aGCCGATCGCATCGCTATTGCCGCTGGCAATGCCGATGCCTGGCGTAGCATGACCGATTTGCAGGAAAGTTTGCAGCAAGAAAACCACCAGCTTAGCGAGCAGCTCCTTTCGAATCTGGGCATCGGTGACATtatctatc > 1:818544/1‑140 (MQ=255)
aGCCGATCGCATCGCTATTGCCGCTGGCAATGCCGATGCCTGGCGTAGCATGACCGATTTGCAGGAAAGTTTGCAGCAAGAAAACCACCAGCTTAGCGAGCAGCTCCTTTCGAATCTGGGCATCGGTGACATtatctatc > 2:459513/1‑140 (MQ=255)
aGCCGATCGCATCGCTATTGCCGCTGGCAATGCCGATGCCTGGCGTAGCATGACCGATTTGCAGGAAAGTTTGCAGCAAGAAAACCACCAGCTTAGCGAGCAGCTCCTTTCGAATCTGGGCATCGGTGACATtatctatc > 2:1176911/1‑140 (MQ=255)
gCCGATCGCATCGCTATTGCCGCTGGCAATGCCGATGCCTGGCGTAGCATGACCGATTTGCAGGAAAGTTTGCAGCAAGAAAACCACCAGCTTAGCGAGCAGCTCCTTTCGAATCTGGGCATCGGTGACATTATCTATCa < 2:1409540/140‑1 (MQ=255)
ccGATCGCATCGCTATTGCCGCTGGCAATGCCGATGCCTGGCGTAGCATGACCGATTTGCAGGAAAGTTTGCAGCAAGAAAACCACCAGCTTAGCGAGCAGCTCCTTTCGAATCTGGGCATCGGTGACATTATCTATCaa > 2:753500/1‑140 (MQ=255)
ccGATCGCATCGCTATTGCCGCTGGCAATGCCGATGCCTGGCGTAGCATGACCGATTTGCAGGAAAGTTTGCAGCAAGAAAACCACCAGCTTAGCGAGCAGCTCCTTTCGAATCTGGGCATCGGTGACATTATCTATCaa > 2:751519/1‑140 (MQ=255)
ccGATCGCATCGCTATTGCCGCTGGCAATGCCGATGCCTGGCGTAGCATGACCGATTTGCAGGAAAGTTTGCAGCAAGAAAACCACCAGCTTAGCGAGCAGCTCCTTTCGAATCTGGGCATCGGTGACATTATCTATCaa < 1:691820/140‑1 (MQ=255)
atcgcatcgcTATTGCCGCTGGCAATGCCGATGCCTGGCGTAGCATGACCGATTTGCAGGAAAGTTTGCAGCAAGAAAACCACCAGCTTAGCGAGCAGCTCCTTTCGAATCTGGGCATCGGTGACATTATCTATCAAAGc > 1:1103146/1‑140 (MQ=255)
atcgcatcgcTATTGCCGCTGGCAATGCCGATGCCTGGCGTAGCATGACCGATTTGCAGGAAAGTTTGCAGCAAGAAAACCACCAGCTTAGCGAGCAGCTCCTTTCGAATCTGGGCATCGGTGACATTATCTATCAAAGc > 1:582175/1‑140 (MQ=255)
atcgcatcgcTATTGCCGCTGGCAATGCCGATGCCTGGCGTAGCATGACCGATTTGCAGGAAAGTTTGCAGCAAGAAAACCACCAGCTTAGCGAGCAGCTCCTTTCGAATCTGGGCATCGGTGACATTATCTATCAAAGc > 1:429136/1‑140 (MQ=255)
atcgcatcgcTATTGCCGCTGGCAATGCCGATGCCTGGCGTAGCATGACCGATTTGCAGGAAAGTTTGCAGCAAGAAAACCACCAGCTTAGCGAGCAGCTCCTTTCGAATCTGGGCATCGGTGACATTATCTATCAAAGc < 2:818544/140‑1 (MQ=255)
atcgcatcgcTATTGCCGCTGGCAATGCCGATGCCTGGCGTAGCATGACCGATTTGCAGGAAAGTTTGCAGCAAGAAAACCACCAGCTTAGCGAGCAGCTCCTTTCGAATCTGGGCATCGGTGACATTATCTATCAAAGc < 2:574230/140‑1 (MQ=255)
atcgcatcgcTATTGCCGCTGGCAATGCCGATGCCTGGCGTAGCATGACCGATTTGCAGGAAAGTTTGCAGCAAGAAAACCACCAGCTTAGCGAGCAGCTCCTTTCGAATCTGGGCATCGGTGACATTATCTATCAAAGc > 1:414723/1‑140 (MQ=255)
catcgcTATTGCCGCTGGCAATGCCGATGCCTGGCGTAGCATGACCGATTTGCAGGAAAGTTTGCAGCAAGAAAACCACCAGCTTAGCGAGCAGCTCCTTTCGAATCTGGGCATCGGTGACATTATCTATCAAAGCCAgg < 1:908208/140‑1 (MQ=255)
catcgcTATTGCCGCTGGCAATGCCGATGCCTGGCGTAGCATGACCGATTTGCAGGAAAGTTTGCAGCAAGAAAACCACCAGCTTAGCGAGCAGCTCCTTTCGAATCTGGGCATCGGTGACATTATCTATCAAAGCCAgg < 2:236014/140‑1 (MQ=255)
atcgcTATTGCCGCTGGCAATGCCGATGCCTGGCGTAGCATGACCGATTTGCAGGAAAGTTTGCAGCAAGAAAACCACCAGCTTAGCGAGCAGCTCCTTTCGAATCTGGGCATCGGTGACATTATCTATCAAAGCCAGGc < 2:472160/140‑1 (MQ=255)
atcgcTATTGCCGCTGGCAATGCCGATGCCTGGCGTAGCATGACCGATTTGCAGGAAAGTTTGCAGCAAGAAAACCACCAGCTTAGCGAGCAGCTCCTTTCGAATCTGGGCATCGGTGACATTATCTATCAAAGCCAGGc < 2:457409/140‑1 (MQ=255)
atcgcTATTGCCGCTGGCAATGCCGATGCCTGGCGTAGCATGACCGATTTGCAGGAAAGTTTGCAGCAAGAAAACCACCAGCTTAGCGAGCAGCTCCTTTCGAATCTGGGCATCGGTGACATTATCTATCAAAGCCAGGc > 2:279213/1‑140 (MQ=255)
tcgcTATTGCCGCTGGCAATGCCGATGCCTGGCGTAGCATGACCGATTTGCAGGAAAGTTTGCAGCAAGAAAACCACCAGCTTAGCGAGCAGCTCCTTTCGAATCTGGGCATCGGTGACATTATCTATCAAAGCCAGGCa < 1:417258/140‑1 (MQ=255)
tcgcTATTGCCGCTGGCAATGCCGATGCCTGGCGTAGCATGACCGATTTGCAGGAAAGTTTGCAGCAAGAAAACCACCAGCTTAGCGAGCAGCTCCTTTCGAATCTGGGCATCGGTGACATTATCTATCAAAGCCAGGCa < 1:1478457/140‑1 (MQ=255)
cgcTATTGCCGCTGGCAATGCCGATGCCTGGCGTAGCATGACCGATTTGCAGGAAAGTTTGCAGCAAGAAAACCACCAGCTTAGCGAGCAGCTCCTTTCGAATCTGGGCATCGGTGACATTATCTATCAAAGCCAGGCaa > 1:1081313/1‑140 (MQ=255)
tATTGCCGCTGGCAATGCCGATGCCTGGCGTAGCATGACCGATTTGCAGGAAAGTTTGCAGCAAGAAAACCACCAGCTTAGCGAGCAGCTCCTTTCGAATCTGGGCATCGGTGACATTATCTATCAAAGCCAGGCAATgg < 1:351208/140‑1 (MQ=255)
ccGCTGGCAATGCCGATGCCTGGCGTAGCATGACCGATTTGCAGGAAAGTTTGCAGCAAGAAAACCACCAGCTTAGCGAGCAGCTCCTTTCGAATCTGGGCATCGGTGACATTATCTATCAAAGCCAGGCAATGGAAGAc < 2:33983/140‑1 (MQ=255)
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TCTGCGCTCCTTATACCGCTTACCTTTGGCAACCATACACCGGGTGCATTGTTGCTGGCGCATACCTCTTCCACTCTCTTTAGTGAGGAAAACTGCCAGCTACTACAACACATAGCCGATCGCATCGCTATTGCCGTTGGCAATGCCGATGCCTGGCGTAGCATGACCGATTTGCAGGAAAGTTTGCAGCAAGAAAACCACCAGCTTAGCGAGCAGCTCCTTTCGAATCTGGGCATCGGTGACATTATCTATCAAAGCCAGGCAATGGAAGAC > NC_000913/2612695‑2612967
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
