Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A9 F28 I1 R1
|
151 |
87.4 |
2971636 |
99.2% |
2947862 |
138.5 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,535,174 |
A→G |
pseudogene (160/1017 nt) |
yjhR → |
KpLE2 phage‑like element; PLD‑like domain‑containing protein YjhR |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,535,174 | 0 | A | G | 100.0%
| 438.8
/ NA
| 122 | pseudogene (160/1017 nt) | yjhR | KpLE2 phage‑like element; PLD‑like domain‑containing protein YjhR |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (59/63); total (59/63) |
Only 100 of 124 total aligned reads displayed.
TAGAGGCATGAAGCCAAATGGAGGGAGCCGTCATAACCCTCTTGAAGCTGAAACAATAGCAGCATGGCTGGTGGCACATAAGGATGATATAGAGCGCCATTACGGGGAACCACTGTACAAAGTTGTTGGTGTTGTGACGCCATTTTCGGCGCAGGTTAATGCTATCAAAATGTCATTGCGTAAGCTGGAAATTAATGGCAAAGACGAGCAGGGTTTACTGACAGTGGGGACTGTGCACTCCTTGCAGGGGGCGGAAAGGGCGATTGTTCTCT > NC_000913/4535038‑4535309
|
cATGAAGCCAAATGGAGGGAGCCGTCATAACCCTCTTGAAGCTGAAACAATAGCAGCATGGCTGGTGGCACATAAGGATGATATAGAGCGCCATTACGGGGAACCACTGTACAAAGTTGTTGGTGTTGTGGCGCCAtttt < 1:1040246/140‑1 (MQ=255)
cATGAAGCCAAATGGAGGGAGCCGTCATAACCCTCTTGAAGCTGAAACAATAGCAGCATGGCTGGTGGCACATAAGGATGATATAGAGCGCCATTACGGGGAACCACTGTACAAAGTTGTTGGTGTTGTGGCGCCAtttt < 2:191022/140‑1 (MQ=255)
aaGCCAAATGGAGGGAGCCGTCATAACCCTCTTGAAGCTGAAACAATAGCAGCATGGCTGGTGGCACATAAGGATGATATAGAGCGCCATTACGGGGAACCACTGTACAAAGTTGTTGGTGTTGTGGCGCCATTTTCGgc > 1:245821/1‑140 (MQ=255)
aGCCAAATGGAGGGAGCCGTCATAACCCTCTTGAAGCTGAAACAATAGCAGCATGGCTGGTGGCACATAAGGATGATATAGAGCGCCATTACGGGGAACCACTGTACAAAGTTGTTGGTGTTGTGGCGCCATTTTCGgcg < 2:882155/140‑1 (MQ=255)
aGCCAAATGGAGGGAGCCGTCATAACCCTCTTGAAGCTGAAACAATAGCAGCATGGCTGGTGGCACATAAGGATGATATAGAGCGCCATTACGGGGAACCACTGTACAAAGTTGTTGGTGTTGTGGCGCCATTTTCGgcg < 2:662733/140‑1 (MQ=255)
aGCCAAATGGAGGGAGCCGTCATAACCCTCTTGAAGCTGAAACAATAGCAGCATGGCTGGTGGCACATAAGGATGATATAGAGCGCCATTACGGGGAACCACTGTACAAAGTTGTTGGTGTTGTGGCGCCATTTTCGgcg < 2:1059402/140‑1 (MQ=255)
aGCCAAATGGAGGGAGCCGTCATAACCCTCTTGAAGCTGAAACAATAGCAGCATGGCTGGTGGCACATAAGGATGATATAGAGCGCCATTACGGGGAACCACTGTACAAAGTTGTTGGTGTTGTGGCGCCATTTTCGgcg < 2:1069932/140‑1 (MQ=255)
aGCCAAATGGAGGGAGCCGTCATAACCCTCTTGAAGCTGAAACAATAGCAGCATGGCTGGTGGCACATAAGGATGATATAGAGCGCCATTACGGGGAACCACTGTACAAAGTTGTTGGTGTTGTGGCGCCATTTTCGgcg < 2:520679/140‑1 (MQ=255)
aGCCAAATGGAGGGAGCCGTCATAACCCTCTTGAAGCTGAAACAATAGCAGCATGGCTGGTGGCACATAAGGATGATATAGAGCGCCATTACGGGGAACCACTGTACAAAGTTGTTGGTGTTGTGGCGCCATTTTCGgcg < 2:513371/140‑1 (MQ=255)
aGCCAAATGGAGGGAGCCGTCATAACCCTCTTGAAGCTGAAACAATAGCAGCATGGCTGGTGGCACATAAGGATGATATAGAGCGCCATTACGGGGAACCACTGTACAAAGTTGTTGGTGTTGTGGCGCCATTTTCGgcg < 2:1092435/140‑1 (MQ=255)
aGCCAAATGGAGGGAGCCGTCATAACCCTCTTGAAGCTGAAACAATAGCAGCATGGCTGGTGGCACATAAGGATGATATAGAGCGCCATTACGGGGAACCACTGTACAAAGTTGTTGGTGTTGTGGCGCCATTTTCGgcg < 2:220912/140‑1 (MQ=255)
aaaTGGAGGGAGCCGTCATAACCCTCTTGAAGCTGAAACAATAGCAGCATGGCTGGTGGCACATAAGGATGATATAGAGCGTCATTACGGGGAACCACTGTACAAAGTTGTTGGTGTTGTGGCGCCATTTTCGGCGCAgg > 2:575371/1‑140 (MQ=255)
aaaTGGAGGGAGCCGTCATAACCCTCTTGAAGCTGAAACAATAGCAGCATGGCTGGTGGCACATAAGGATGATATAGAGCGCCATTACGGGGAACCACTGTACAAAGTTGTTGGTGTTGTGGCGCCATTTTCGgcg > 1:1147689/1‑136 (MQ=255)
agggagCCGTCATAACCCTCTTGAAGCTGAAACAATAGCAGCATGGCTGGTGGCACATAAGGATGATATAGAGCGCCATTACGGGGAACCACTGTACAAAGTTGTTGGTGTTGTGGCGCCATTTTCGGCGCAGGTTAATg < 2:848671/140‑1 (MQ=255)
ggagCCGTCATAACCCTCTTGAAGCTGAAACAATAGCAGCATGGCTGGTGGCACATAAGGATGATATAGAGCGCCATTACGGGGAACCACTGTACAAAGTTGTTGGTGTTGTGGCGCCATTTTCGGCGCAGGTTAATGCt > 1:40142/1‑140 (MQ=255)
ggagCCGTCATAACCCTCTTGAAGCTGAAACAATAGCAGCATGGCTGGTGGCACATAAGGATGATATAGAGCGCCATTACGGGGAACCACTGTACAAAGTTGTTGGTGTTGTGGCGCCATTTTCGGCGCAGGTTAATGCt > 1:538322/1‑140 (MQ=255)
cGTCATAACCCTCTTGAAGCTGAAACAATAGCAGCATGGCTGGTGGCACATAAGGATGATATAGAGCGCCATTACGGGGAACCACTCTACAAAGTTGTTGGTGTTGTGGCGCCATTTTCGGCGCAGGTTa < 2:1341812/130‑1 (MQ=255)
cGTCATAACCCTCTTGAAGCTGAAACAATAGCAGCATGGCTGGTGGCACATAAGGATGATATAGAGCGCCATTACGGGGAACCACTCTACAAAGTTGTTGGTGTTGTGGCGCCATTTTCGGCGCAGGTTa > 1:1341812/1‑130 (MQ=255)
tCATAACCCTCTTGAAGCTGAAACAATAGCAGCATGGCTGGTGGCACATAAGGATGATATAGAGCGCCATTACGGGGAACCACTGTACAAAGTTGTTGGTGTTGTGGCGCCATTTTCGGCGCAGGTTAATGCTATCaaaa < 2:141158/140‑1 (MQ=255)
cATAACCCTCTTGAAGCTGAAACAATAGCAGCATGGCTGGTGGCACATAAGGATGATATAGAGCGCCATTACGGGGAACCACTGTACAAAGTTGTTGGTGTTGTGGCGCCATTTTCGGCGCAGGTTAATGCTATCAAAAt > 1:1098833/1‑140 (MQ=255)
cccTCTTGAAGCTGAAACAATAGCAGCATGGCTGGTGGCACATAAGGATGATATAGAGCGCCATTACGGGGGACCACTGTACAAAGTTGTTGGTGTTGTGGCGCCATTTTCGGCGCAGGTTAATGCTATCAAAATGTCAt > 2:636345/1‑140 (MQ=255)
ctctTGAAGCTGAAACAATAGCAGCATGGCTGGTGGCACATAAGGATGATATAGAGCGCCATTACGGGGAACCACTGTACAAAGTTGTTGGTGTTGTGGCGCCATTTTCGGCGCAGGTTAATGCTATCAAAATGTCATTg > 2:425131/1‑140 (MQ=255)
tctTGAAGCTGAAACAATAGCAGCATGGCTGGTGGCACATAAGGATGATATAGAGCGCCATTACGGGGAACCACTGTACAAAGTTGTTGGTGTTGTGGCGCCATTTTCGGCGCAGGTTAATGCTATCAAAATGTCATTGc > 2:546055/1‑140 (MQ=255)
tctTGAAGCTGAAACAATAGCAGCATGGCTGGTGGCACATAAGGATGATATAGAGCGCCATTACGGGGAACCACTGTACAAAGTTGTTGGTGTTGTGGCGCCATTTTCGGCGCAGGTTAATGCTATCAAAATGTCATTGc > 1:572896/1‑140 (MQ=255)
ttGAAGCTGAAACAATAGCAGCATGGCTGGTGGCACATAAGGATGATATAGAGCGCCATTACGGGGAACCACTGTACAAAGTTGTTGGTGTTGTGGCGCCATTTTCGGCGCAGGTTAATGCTATCAAAATGTCATTGCGt > 1:823222/1‑140 (MQ=255)
ttGAAGCTGAAACAATAGCAGCATGGCTGGTGGCACATAAGGATGATATAGAGCGCCATTACGGGGAACCACTGTACAAAGTTGTTGGTGTTGTGGCGCCATTTTCGGCGCAGGTTAATGCTATCAAAATGTCATTGCGt > 2:718259/1‑140 (MQ=255)
ttGAAGCTGAAACAATAGCAGCATGGCTGGTGGCACATAAGGATGATATAGAGCGCCATTACGGGGAACCACTGTACAAAGTTGTTGGTGTTGTGGCGCCATTTTCGGCGCAGGTTAATGCTATCAAAATGTCATTGCGt > 2:941640/1‑140 (MQ=255)
gCTGAAACAATAGCAGCATGGCTGGTGGCACATAAGGATGATATAGAGCGCCATTACGGGGAACCACTGTACAAAGTTGTTGGTGTTGTGGCGCCATTTTCGGCGCAGGTTAATGCTATCAAAATGTCATTGCGTAAGCt > 1:1182896/1‑140 (MQ=255)
tGAAACAATAGCAGCATGGCTGGTGGCACATAAGGATGATATAGAGCGCCATTACGGGGAACCACTGTACAAAGTTGTTGGTGTTGTGGCGCCATTTTCGGCGCAGGTTAATGCTATCAAAATGTCATTGCGTAAGCTgg < 1:546055/140‑1 (MQ=255)
tGAAACAATAGCAGCATGGCTGGTGGCACATAAGGATGATATAGAGCGCCATTACGGGGAACCACTGTACAAAGTTGTTGGTGTTGTGGCGCCATTTTCGGCGCAGGTTAATGCTATCAAAATGTCATTGCGTAAGCTgg < 2:1098833/140‑1 (MQ=255)
aaaCAATAGCAGCATGGCTGGTGGCACATAAGGATGATATAGAGCGCCATTACGGGGGACCACTGTACAAAGTTGTTGGTGTTGTGGCGCCATTTTCGGCGCAGGTTAATGCTATCAAAATGTCATTGCGTAAGCTGGaa < 1:636345/140‑1 (MQ=255)
caTGGCTGGTGGCACATAAGGATGATATAGAGCGCCATTACGGGGAACCACTGTACAAAGTTGTTGGTGTTGTGGCGCCATTTTCGGCGCAGGTTAATGCTATCAAAATGTCATTGCGTAAGCTGGAAATTAATGGCaaa > 1:478222/1‑140 (MQ=255)
caTGGCTGGTGGCACATAAGGATGATATAGAGCGCCATTACGGGGAACCACTGTACAAAGTTGTTGGTGTTGTGGCGCCATTTTCGGCGCAGGTTAATGCTATCAAAATGTCATTGCGTAAGCTGGAAATTAATGGCaaa < 1:320785/140‑1 (MQ=255)
aTGGCTGGTGGCACATAAGGATGATATAGAGCGCCATTACGGGGAACCACTGTACAAAGTTGTTGGTGTTGTGGCGCCATTTTCGGCGCAGGTTAATGCTATCAAAATGTCATTGCGTAAGCTGGAAATTAATGGCa < 2:567117/137‑1 (MQ=255)
aTGGCTGGTGGCACATAAGGATGATATAGAGCGCCATTACGGGGAACCACTGTACAAAGTTGTTGGTGTTGTGGCGCCATTTTCGGCGCAGGTTAATGCTATCAAAATGTCATTGCGTAAGCTGGAAATTAATGGCa > 1:567117/1‑137 (MQ=255)
tGGCTGGTGGCACATAAGGATGATATAGAGCGCCATTACGGGGACCCACTGTACAAAGTTGTTGGTGTTGTGGCGCCATTTTCGGCGCAGGTTAATGCTATCAAAATGTCATTGCGTAAGCTg < 1:711343/123‑1 (MQ=255)
tGGCTGGTGGCACATAAGGATGATATAGAGCGCCATTACGGGGAACCACTGTACAAAGTTGTTGGTGTTGTGGCGCCATTTTCGGCGCAGGTTAATGCTATCAAAATGTCATTGCGTAAGCTGGAAATTAATGGCAAAGa > 1:10026/1‑140 (MQ=255)
tGGCTGGTGGCACATAAGGATGATATAGAGCGCCATTACGGGGAACCACTGTACAAAGTTGTTGGTGTTGTGGCGCCATTTTCGGCGCAGGTTAATGCTATCAAAATGTCATTGCGTAAGCTGGAAATTAATGGCAAAGa > 1:1375371/1‑140 (MQ=255)
ggtggCACATAAGGATGATATAGAGCGCCATTACGGGGAACCACTGTACAAAGTTGTTGGTGTTGTGGCGCCATTTTCGGCGCAGGTTAATGCTATCAAAATGTCATTGCGTAAGCTGGAAATTAATGGCAAAGACGAGc < 2:572896/140‑1 (MQ=255)
tggCACATAAGGATGATATAGAGCGCCATTACGGGGAACCACTGTACAAAGTTGTTGGTGTTGTGGCGCCATTTTCGGCGCAGGTTAATGCTATCAAAATGTCATTGCGTAAGCTGGAAATTAATGGCAAAGACGAGCAg > 2:248909/1‑140 (MQ=255)
tggCACATAAGGATGATATAGAGCGCCATTACGGGGAACCACTGTACAAAGTTGTTGGTGTTGTGGCGCCATTTTCGGCGCAGGTTAATGCTATCAAAATGTCATTGCGTAAGCTGGAAATTAATGGCAAAGACGAGCAg < 1:941640/140‑1 (MQ=255)
gCACATAAGGATGATATAGAGCGCCATTACGGGGAACCACTGTACAAAGTTGTTGGTGTTGTGGCGCCATTTTCGGCGCAGGTTAATGCTATCAAAATGTCATTGCGTAAGCTGGAAATTAATGGCAAAGACGAGCAggg < 1:1773/140‑1 (MQ=255)
acaTAAGGATGATATAGAGCGCCATTACGGGGAACCACTGTACAAAGTTGTTGGTGTTGTGGCGCCATTTTCGGCGCAGGTTAATGCTATCAAAATGTCATTGCGTAAGCTGGAAATTAATGGCAAAGACGAGCAGGGtt > 2:1409255/1‑140 (MQ=255)
caTAAGGATGATATAGAGCGCCATTACGGGGAACCACTGTACAAAGTTGTTGGTGTTGTGGCGCCATTTTCGGCGCAGGTTAATGCTATCAAAATGTCATTGCGTAAGCTGGAAATTAATGGCAAAGACGAGc < 2:526811/133‑1 (MQ=255)
caTAAGGATGATATAGAGCGCCATTACGGGGAACCACTGTACAAAGTTGTTGGTGTTGTGGCGCCATTTTCGGCGCAGGTTAATGCTATCAAAATGTCATTGCGTAAGCTGGAAATTAATGGCAAAGACGAGc > 1:526811/1‑133 (MQ=255)
caTAAGGATGATATAGAGCGCCATTACGGGGAACCACTGTACAAAGTTGTTGGTGTTGTGGCGCCATTTTCGGCGCAGGTTAATGCTATCAAAATGTCATTGCGTAAGCTGGAAATTAATGGCAAAGACGAGCAGGGttt < 1:8091/140‑1 (MQ=255)
aGGATGATATAGAGCGTCATTACGGGGAACCACTGTACAAAGTTGTTGGTGTTGTGGCGCCATTTTCGGCGCAGGTTAATGCTATCAAAATGTCATTGCGTAAGCTGGAAATTAATGGCAAAGACGAGCAGGGTTTACTg < 1:575371/140‑1 (MQ=255)
aGGATGATATAGAGCGCCATTACGGGGAACCACTGTACAAAGTTGTTGGTGTTGTGGCGCCATTTTCGGCGCAGGTTAATGCTATCAAAATGTCATTGCGTAAGCTGGAAATTAATGGCAAAGACGAGCAGGGTTTACTg < 2:577137/140‑1 (MQ=255)
aGGATGATATAGAGCGCCATTACGGGGAACCACTGTACAAAGTTGTTGGTGTTGTGGCGCCATTTTCGGCGCAGGTTAATGCTATCAAAATGTCATTGCGTAAGCTGGAAATTAATGGCAAAGACGAGCAGGGTTTACTg < 1:248909/140‑1 (MQ=255)
tataGAGCGCCATTACGGGGAACCACTGTACAAAGTTGTTGGTGTTGTGGCGCCATTTTCGGCGCAGGTTAATGCTATCAAAATGTCATTGCGTAAGCTGGAAATTAATGGCAAAGACGAGCAGGGTTTACTg < 2:1137325/133‑1 (MQ=255)
tataGAGCGCCATTACGGGGAACCACTGTACAAAGTTGTTGGTGTTGTGGCGCCATTTTCGGCGCAGGTTAATGCTATCAAAATGTCATTGCGTAAGCTGGAAATTAATGGCAAAGACGAGCAGGGTTTACTGACAGTgg < 2:425165/140‑1 (MQ=255)
tataGAGCGCCATTACGGGGAACCACTGTACAAAGTTGTTGGTGTTGTGGCGCCATTTTCGGCGCAGGTTAATGCTATCAAAATGTCATTGCGTAAGCTGGAAATTAATGGCAAAGACGAGCAGGGTTTACTGACAGTgg < 1:1409255/140‑1 (MQ=255)
ataGAGCGCCATTACGGGGAACCACTGTACAAAGTTGTTGGTGTTGTGGCGCCATTTTCGGCGCAGGTTAATGCTATCAAAATGTCATTGCGTAAGCTGGAAATTAATGGCAAAGACGAGCAGGGTTTACTGACAGTggg < 2:10026/140‑1 (MQ=255)
taGAGCGCCATTACGGGGAACCACTGTACAAAGTTGTTGGTGTTGTGGCGCCATTTTCGGCGCAGGTTAATGCTATCAAAATGTCATTGCGTAAGCTGGAAATTAATGGCAAAGACGAGCAGGGTTTACTGa > 2:1275489/1‑132 (MQ=255)
agagCGCCATTACGGGGAACCACTGTACAAAGTTGTTGGTGTTGTGGCGCCATTTTCGGCGCAGGTTAATGCTATCAAAATGTCATTGCGTAAGCTGGAAATTAATGGCAAAGACGAGCAGGGTTTACTGACAGTGGGGa < 2:1002039/140‑1 (MQ=255)
agagCGCCATTACGGGGAACCACTGTACAAAGTTGTTGGTGTTGTGGCGCCATTTTCGGCGCAGGTTAATGCTATCAAAATGTCATTGCGTAAGCTGGAAATTAATGGCAAAGACGAGCAGGGTTTACTGACAGTGGGGa < 2:1083546/140‑1 (MQ=255)
gagCGCCATTACGGGGAACCACTGTACAAAGTTGTTGGTGTTGTGGCGCCATTTTCGGCGCAGGTTAATGCTATCAAAATGTCATTGCGTAAGCTGGAAATTAATGGCAAAGACGAGCAGGGTTTACTGACAGTGGGGa < 2:102899/139‑1 (MQ=255)
gagCGCCATTACGGGGAACCACTGTACAAAGTTGTTGGTGTTGTGGCGCCATTTTCGGCGCAGGTTAATGCTATCAAAATGTCATTGCGTAAGCTGGAAATTAATGGCAAAGACGAGCAGGGTTTACTGACAGTGGGGa > 1:102899/1‑139 (MQ=255)
agCGCCATTACGGGGAACCACTGTACAAAGTTGTTGGTGTTGTGGCGCCATTTTCGGCGCAGGTTAATGCTATCAAAATGTCATTGCGTAAGCTGGAAATTAATGGCAAAGACGAGCAGGGTTTACTGAc < 2:1392796/130‑1 (MQ=255)
agCGCCATTACGGGGAACCACTGTACAAAGTTGTTGGTGTTGTGGCGCCATTTTCGGCGCAGGTTAATGCTATCAAAATGTCATTGCGTAAGCTGGAAATTAATGGCAAAGACGAGCAGGGTTTACTGAc > 1:1392796/1‑130 (MQ=255)
agCGCCATTACGGGGAACCACTGTACAAAGTTGTTGGTGTTGTGGCGCCATTTTCGGCGCAGGTTAATGCTATCAAAATGTCATTGCGTAAGCTGGAAATTAATGGCAAAGACGAGCAGGGTTTACTGACAGTGGGGAc < 2:941119/139‑1 (MQ=255)
agCGCCATTACGGGGAACCACTGTACAAAGTTGTTGGTGTTGTGGCGCCATTTTCGGCGCAGGTTAATGCTATCAAAATGTCATTGCGTAAGCTGGAAATTAATGGCAAAGACGAGCAGGGTTTACTGACAGTGGGGACt > 2:1162898/1‑140 (MQ=255)
gcgcCATTACGGGGAACCACTGTACAAAGTTGTTGGTGTTGTGGCGCCATTTTCGGCGCAGGTTAATGCTATCAAAATGTCATTGCGTAAGCTGGAAATTAATGGCAAAGACGAGCAGGGTTTAc < 2:371487/125‑1 (MQ=255)
gcgcCATTACGGGGAACCACTGTACAAAGTTGTTGGTGTTGTGGCGCCATTTTCGGCGCAGGTTAATGCTATCAAAATGTCATTGCGTAAGCTGGAAATTAATGGCAAAGACGAGCAGGGTTTAc > 1:371487/1‑125 (MQ=255)
gcgcCATTACGGGGAACCACTGTACAAAGTTGTTGGTGTTGTGGCGCCATTTTCGGCGCAGGTTAATGCTATCAAAATGTCATTGCGTAAGCTGGAAATTAATGGCAAAGACGAGCAGGGTTTACTGACa > 1:1103330/1‑130 (MQ=255)
gcgcCATTACGGGGAACCACTGTACAAAGTTGTTGGTGTTGTGGCGCCATTTTCGGCGCAGGTTAATGCTATCAAAATGTCATTGCGTAAGCTGGAAATTAATGGCAAAGACGAGCAGGGTTTACTGACa < 2:1103330/130‑1 (MQ=255)
gcgcCATTACGGGGAACCACTGTACAAAGTTGTTGGTGTTGTGGCGCCATTTTCGGCGCAGGTTAATGCTATCAAAATGTCATTGCGTAAGCTGGAAATTAATGGCAAAGACGAGCAGGGTTTACTGACAGTGGGGa < 1:111304/137‑1 (MQ=255)
gcgcCATTACGGGGAACCACTGTACAAAGTTGTTGGTGTTGTGGCGCCATTTTCGGCGCAGGTTAATGCTATCAAAATGTCATTGCGTAAGCTGGAAATTAATGGCAAAGACGAGCAGGGTTTACTGACAGTGGGGa > 2:111304/1‑137 (MQ=255)
cgcCATTACGGGGAACCACTGTACAAAGTTGTTGGTGTTGTGGCGCCATTTTCGGCGCAGGTTAATGCTATCAAAATGTCATTGCGTAAGCTGGAAATTAATGGCAAAGACGAGCAGGGTTTACTGACAGTGGGGACtgt < 2:1375371/140‑1 (MQ=255)
cgcCATTACGGGGAACCACTGTACAAAGTTGTTGGTGTTGTGGCGCCATTTTCGGCGCAGGTTAATGCTATCAAAATGTCATTGCGTAAGCTGGAAATTAATGGCAAAGACGAGCAGGGTTTACTGACAGTGGGGACtgt > 1:728928/1‑140 (MQ=255)
cgcCATTACGGGGAACCACTGTACAAAGTTGTTGGTGTTGTGGCGCCATTTTCGGCGCAGGCTAATGCTATCAAAATGTCATTGCGTAAGCTGGAAATTAATGGCAAAGACGAGCAGGGTTTACTGACAGTGGGGACtgt > 2:1067761/1‑140 (MQ=255)
ccATTACGGGGAACCACTGTACAAAGTTGTTGGTGTTGTGGCGCCATTTTCGGCGCAGGTTAATGCTATCAAAATGTCATTGCGTAAGCTGGAAATTAATGGCAAAGACGAGCAGGGTTTACTGACAGTGGGGACTGTGc > 2:355026/1‑140 (MQ=255)
ccATTACGGGGAACCACTGTACAAAGTTGTTGGTGTTGTGGCGCCATTTTCGGCGCAGGCTAATGCTATCAAAATGTCATTGCGTAAGCTGGAAATTAATGGCAAAGACGAGCAGGGTTTACTGACAGTGGGGACTGTGc < 1:1067761/140‑1 (MQ=255)
cATTACGGGGAACCACTGTACAAAGTTGTTGGTGTTGTGGCGCCATTTTCGGCGCAGGTTAATGCTATCAAAATGTCATTGCGTAAGCTGGAAATTAATGGCAAAGACGAGCAGGGTTTACTGACAGTGGGGa < 2:168026/133‑1 (MQ=255)
cATTACGGGGAACCACTGTACAAAGTTGTTGGTGTTGTGGCGCCATTTTCGGCGCAGGTTAATGCTATCAAAATGTCATTGCGTAAGCTGGAAATTAATGGCAAAGACGAGCAGGGTTTACTGACAGTGGGGACTGTGcc > 1:1214643/1‑139 (MQ=255)
cATTACGGGGAACCACTGTACAAAGTTGTTGGTGTTGTGGCGCCATTTTCGGCGCAGGTTAATGCTATCAAAATGTCATTGCGTAAGCTGGAAATTAATGGCAAAGACGAGCAGGGTTTACTGACAGTGGGGACTGTGCa > 2:1230383/1‑140 (MQ=255)
aTTACGGGGAACCACTGTACAAAGTTGTTGGTGTTGTGGCGCCATTTTCGGCGCAGGTTAATGCTATCAAAATGTCATTGCGTAAGCTGGAAATTAATGGCAAAGACGAGCAGGGTTTACTGACAGTGGGGACTGTGCAc < 2:1182896/140‑1 (MQ=255)
ttACGGGGAACCACTGTACAAAGTTGTTGGTGTTGTGGCGCCATTTTCGGCGCAGGTTAATGCTATCAAAATGTCATTGCGTAAGCTGGAAATTAATGGCAAAGACGAGCAGGGTTTACTGACAGTGGGGACtgtg > 1:1378366/1‑136 (MQ=255)
ttACGGGGAACCACTGTACAAAGTTGTTGGTGTTGTGGCGCCATTTTCGGCGCAGGTTAATGCTATCAAAATGTCATTGCGTAAGCTGGAAATTAATGGCAAAGACGAGCAGGGTTTACTGACAGTGGGGACtgtg < 2:1378366/136‑1 (MQ=255)
tACGGGGAACCACTGTACAAAGTTGTTGGTGTTGTGGCGCCATTTTCGGCGCAGGTTAATGCTATCAAAATGTCATTGCGTAAGCTGGAAATTAATGGCAAAGACGAGCAGGGTTTACTGACAGTGGGGACTGTGCACTc < 1:925876/140‑1 (MQ=255)
tACGGGGAACCACTGTACAAAGTTGTTGGTGTTGTGGCGCCATTTTCGGCGCAGGTTAATGCTATCAAAATGTCATTGCGTAAGCTGGAAATTAATGGCAAAGACGAGCAGGGTTTACTGACAGTGGGGACTGTGCACTc < 1:355026/140‑1 (MQ=255)
gAACCACTGTACAAAGTTGTTGGTGTTGTGGCGCCATTTTCGGCGCAGGTTAATGCTATCAAAATGTCATTGCGTAAGCTGGAAATTAATGGCAAAGACGAGCAGGGTTTACTGACAGTGGGGACTGTGCACTCCTTGCa < 1:1345465/140‑1 (MQ=255)
aaCCACTGTACAAAGTTGTTGGTGTTGTGGCGCCATTTTCGGCGCAGGTTAATGCTATCAAAATGTCATTGCGTAAGCTGGAAATTAATGGCAAAGACGAGCAGGGTTTACTGACAGTGGGGACTGTGCACTCCTTGCa < 2:639397/139‑1 (MQ=255)
aaCCACTGTACAAAGTTGTTGGTGTTGTGGCGCCATTTTCGGCGCAGGTTAATGCTATCAAAATGTCATTGCGTAAGCTGGAAATTAATGGCAAAGACGAGCAGGGTTTACTGACAGTGGGGACTGTGCACTCCTTGCa > 1:639397/1‑139 (MQ=255)
aaCCACTGTACAAAGTTGTTGGTGTTGTGGCGCCATTTTCGGCGCAGGTTAATGCTATCAAAATGTCATTGCGTAAGCTGGAAATTAATGGCAAAGACGAGCAGGGTTTACTGACAGTGGGGACTGTGCACTCCTTGCAg < 2:1351508/140‑1 (MQ=255)
aaCCACTGTACAAAGTTGTTGGTGTTGTGGCGCCATTTTCGGCGCAGGTTAATGCTATCAAAATGTCATTGCGTAAGCTGGAAATTAATGGCAAAGACGAGCAGGGTTTACTGACAGTGGGGACTGTGCACTCCTTGCAg > 1:343584/1‑140 (MQ=255)
aaCCACTGTACAAAGTTGTTGGTGTTGTGGCGCCATTTTCGGCGCAGGTTAATGCTATCAAAATGTCATTGCGTAAGCTGGAAATTAATGGCAAAGACGAGCAGGGTTTACTGACAGTGGGGACTGTGCACTCCTTGCAg > 1:1071319/1‑140 (MQ=255)
aaCCACTGTACAAAGTTGTTGGTGTTGTGGCGCCATTTTCGGCGCAGGTTAATGCTATCAAAATGTCATTGCGTAAGCTGGAAATTAATGGCAAAGACGAGCAGGGTTTACTGACAGTGGGGACTGTGCACTCCTTGCAg > 1:215739/1‑140 (MQ=255)
aaCCACTGTACAAAGTTGTTGGTGTTGTGGCGCCATTTTCGGCGCAGGTTAATGCTATCAAAATGTCATTGCGTAAGCTGGAAATTAATGGCAAAGACGAGCAGGGTTTACTGACAGTGGGGACTGTGCACTCCTTGCAg > 2:565247/1‑140 (MQ=255)
cTGTACAAAGTTGTTGGTGTTGTGGCGCCATTTTCGGCGCAGGTTAATGCTATCAAAATGTCATTGCGTAAGCTGGAAATTAATGGCAAAGACGAGCAGGGTTTACTGACAGTGGGGACTGTGCACTCCTTGCAGGGGGc > 1:1406729/1‑140 (MQ=255)
tACAAAGTTGTTGGTGTTGTGGCGCCATTTTCGGCGCAGGTTAATGCTATCAAAATGTCATTGCGTAAGCTGGAAATTAATGGCAAAGACGAGCAGGGTTTACTGACAGTGGGGACTGTGCACTCCTTGCAGGGGGCGGa < 1:576328/140‑1 (MQ=255)
aaGTTGTTGGTGTTGTGGCGCCATTTTCGGCGCAGGTTAATGCTATCAAAATGTCATTGCGTAAGCTGGAAATTAATGGCAAAGACGAGCAGGGTTTACTGACAGTGGGGACTGTGCACTCCTTGCAGGGGGCGGAAAgg > 1:925139/1‑140 (MQ=255)
aGTTGTTGGTGTTGTGGCGCCATTTTCGGCGCAGGTTAATGCTATCAAAATGTCATTGCGTAAGCTGGAAATTAATGGCAAAGACGAGCAGGGTTTACTGACAGTGGGGACTGTGCACTCCTTGCAGGGGGCGGAAAggg > 2:788569/1‑140 (MQ=255)
gttgGTGTTGTGGCGCCATTTTCGGCGCAGGTTAATGCTATCAAAATGTCATTGCGTAAGCTGGAAATTAATGGCAAAGACGAGCAGGGTTTACTGACAGTGGGGACTGTGCACTCCTTGCAGGGGGCGGAAAGGGCGAt > 2:1405402/1‑140 (MQ=255)
ttgGTGTTGTGGCGCCATTTTCGGCGCAGGTTAATGCTATCAAAATGTCATTGCGTAAGCTGGAAATTAATGGCAAAGACGAGCAGGGTTTACTGACAGTGGGGACTGTGCACTCCTTGCAGGGGGCGGAAAGGGCGAtt > 2:806307/1‑140 (MQ=255)
gtgtTGTGGCGCCATTTTCGGCGCAGGTTAATGCTATCAAAATGTCATTGCGTAAGCTGGAAATTAATGGCAAAGACGAGCAGGGTTTACTGACAGTGGGGACTGTGCACTCCTTGCAGGGGGCGGAAAGGGCGATTGtt < 2:475024/140‑1 (MQ=255)
gtgtTGTGGCGCCATTTTCGGCGCAGGTTAATGCTATCAAAATGTCATTGCGTAAGCTGGAAATTAATGGCAAAGACGAGCAGGGTTTACTGACAGTGGGGACTGTGCACTCCTTGCAGGGGGCGGAAAGGGCGATTGtt < 1:1230383/140‑1 (MQ=255)
gttgtGGCGCCATTTTCGGCGCAGGTTAATGCTATCAAAATGTCATTGCGTAAGCTGGAAATTAATGGCAAAGACGAGCAGGGTTTACTGACAGTGGGGACTGTGCACTCCTTGCAGGGGGCGGAAAGGGCGATTGTtct > 1:1103732/1‑140 (MQ=255)
tgtgGCGCCATTTTCGGCGCAGGTTAATGCTATCAAAATGTCATTGCGTAAGCTGGAAATTAATGGCAAAGACGAGCAGGGTTTACTGACAGTGGGGACTGTGCACTCCTTGCAGGGGGCGGAAAGGGCGATTGTTctct < 1:1442151/140‑1 (MQ=255)
tgtgGCGCCATTTTCGGCGCAGGTTAATGCTATCAAAATGTCATTGCGTAAGCTGGAAATTAATGGCAAAGACGAGCAGGGTTTACTGACAGTGGGGACTGTGCACTCCTTGCAGGGGGCGGAAAGGGCGATTGTTctct < 2:823222/140‑1 (MQ=255)
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TAGAGGCATGAAGCCAAATGGAGGGAGCCGTCATAACCCTCTTGAAGCTGAAACAATAGCAGCATGGCTGGTGGCACATAAGGATGATATAGAGCGCCATTACGGGGAACCACTGTACAAAGTTGTTGGTGTTGTGACGCCATTTTCGGCGCAGGTTAATGCTATCAAAATGTCATTGCGTAAGCTGGAAATTAATGGCAAAGACGAGCAGGGTTTACTGACAGTGGGGACTGTGCACTCCTTGCAGGGGGCGGAAAGGGCGATTGTTCTCT > NC_000913/4535038‑4535309
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
