Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A7 F28 I1 R1
|
183 |
98.6 |
3427438 |
96.9% |
3321187 |
138.7 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,538,189 |
C→T |
D193N (GAT→AAT) |
nanM ← |
N‑acetylneuraminate mutarotase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,538,189 | 0 | C | T | 100.0%
| 322.0
/ NA
| 89 | D193N (GAT→AAT) | nanM | N‑acetylneuraminate mutarotase |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (49/40); total (49/40) |
GCATCCGTTCGCAATCCTGGTTTGGCTTCGCCATT‑AATAAGCCAGG‑TTTTATCACCTTTATT‑CACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCAAAAGACAACAGAAACTTATTGAAGAAATAATCTTCTGCTTTTTTGTCAAAATAGTGAGCATTGATTTTATCTATAGCGGTTGAATCTTTTCCAGCCTCGTTGAGATCTTCAAAATAGCCATTGAAGATATTC > NC_000913/4538056‑4538322
|
gCATCCGTTCGCAATCCTGGTTTGGCTTCGCCATT‑AATAAGCCAGG‑TTTTATCACCTTTATT‑CACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATTAAAAGa > 2:1314085/1‑140 (MQ=255)
gCATCCGTTCGCAATCCTGGTTTGGCTTCGCCATT‑AATAAGCCAGG‑TTTTATCACCTTTATT‑CACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATTAAAAGa > 2:701133/1‑140 (MQ=255)
ccATCCTTCCGCATTCTTGTTTTGGCTCCGCAATA‑AAAAAGCCGGT‑TTTTATCCCTTTTATC‑CACACCCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATTAAAAGa < 2:198578/139‑1 (MQ=255)
cATCCGTTCGCAATCCTGGTTTGGCTTCGCCATT‑AATAAGCCAGG‑TTTTATCACCTTTATT‑CACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATTAAAAGac > 2:984055/1‑140 (MQ=255)
tCCGTTCGCAATCCTGGTTTGGCTTCGCCATT‑AATAAGCCAGG‑TTTTATCACCTTTATT‑CACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATTAAAAGacaa > 1:1554958/1‑140 (MQ=255)
ccGTTCGCAATCCTGGTTTGGCTTCGCCATT‑AATAAGCCAGG‑TTTTATCACCTTTATT‑CACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATTAAAAGacaac > 2:1515155/1‑140 (MQ=255)
cGCAATCCTGGTTTGGCTTCGCCATT‑AATAAGCCAGG‑TTTTATCACCTTTATT‑CACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATTAAAAGACAACAGaaa > 2:1625783/1‑140 (MQ=255)
tCCTGGTTTGGCTTCGCCATT‑AATAAGCCAGG‑TTTTATCACCTTTATT‑CACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATTAAAAGACAACAGAAACTTAt > 1:1017606/1‑140 (MQ=255)
ttgttttGTCTTCCCCATT‑AATACGCCGGT‑TTTTTCCACCTTTTTC‑CACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATTAAAAGACAACAGAAACTTATTg < 2:148200/136‑1 (MQ=255)
ttGGTTGGGCTCCCCAATA‑AAAAAGCCAGT‑TTTTATCCCTTTTATC‑CACACCCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATTAAAAGACAACAGAAACTTATTg < 2:976416/139‑1 (MQ=255)
tGGTTTGGCTTCCCCATT‑AAAAAGCGAGT‑TTTTATCCCTTTTATT‑CAAAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATTAAAAGACAACAGAAACTTATTga < 1:1600114/140‑1 (MQ=255)
tgTTTGGCCTCCCCATTAAAAAAGCCGGT‑TTTTACCCCTTTTATC‑CACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATTAAAAGACAACAGAAACTTATTga < 2:205591/139‑1 (MQ=255)
tttGGCTTCGCCATT‑AATAAGCCAGG‑TTTTATCACCTTTATT‑CACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATTAAAAGACAACAGAAACTTATTgaaga > 1:1256932/1‑140 (MQ=255)
gCTTCGCCATT‑AATAAGCCAGG‑TTTTATCACCTTTATT‑CACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATTAAAAGACAACAGAAACTTATTGAAGAaata > 2:1020880/1‑140 (MQ=255)
cGCCATT‑AATAAGCCAGG‑TTTTATCACCTTTATT‑CACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATTAAAAGACAACAGAAACTTATTGAAGAAATAAtct > 1:696828/1‑140 (MQ=255)
ccATT‑AATAAGCCAGG‑TTTTATCACCTTTATT‑CACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATTAAAAGACAACAGAAACTTATTGAAGAAATAAtcttc > 1:932449/1‑140 (MQ=255)
aaaGCCCGG‑TTTTTTCCCTTTTTTTCCAAAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATTAAAAGACAACAGAAACTTATTGAAGAAATAATCTTCTGCttt < 2:1256932/139‑1 (MQ=255)
aaccAGGTTTTTACCCCTTTTATT‑CAAAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATTAAAAGACAACAGAAACTTATTGAAGAAATAATCTTCTGCttttt < 1:661899/138‑1 (MQ=255)
aGCCAGG‑TTTTATCACCTTTATT‑CACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATTAAAAGACAACAGAAACTTATTGAAGAAATAATCTTCTGCtttttt > 2:23861/1‑140 (MQ=255)
gcgtttttttATCCCTTTTTTC‑CAAACCCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATTAAAAGACAACAGAAACTTATTGAAGAAATAATCTTCTGCTTTTTTg < 2:1198880/134‑1 (MQ=255)
ccAGG‑TTTTATCACCTTTATT‑CACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATTAAAAGACAACAGAAACTTATTGAAGAAATAATCTTCTGCTTTTTTGt > 2:972781/1‑140 (MQ=255)
ccAGG‑TTTTATCACCTTTATT‑CACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATTAAAAGACAACAGAAACTTATTGAAGAAATAATCTTCTGCTTTTTTGt > 1:774035/1‑140 (MQ=255)
gg‑TTTTATCACCTTTATT‑CACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATTAAAAGACAACAGAAACTTATTGAAGAAATAATCTTCTGCTTTTTTGTCaa > 1:1019995/1‑140 (MQ=255)
agtttttACCCCCTTTATC‑CACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATTAAAAGACAACAGAAACTTATTGAAGAAATAATCTTCTGCTTTTTTGTCa < 2:1019995/137‑1 (MQ=255)
g‑TTTTATCACCTTTATT‑CACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATTAAAAGACAACAGAAACTTATTGAAGAAATAATCTTCTGCTATTTTGTCaaa > 2:609772/1‑140 (MQ=255)
ttcccttttATC‑CACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATTAAAAGACAACAGAAACTTATTGAAGAAATAATCTTCTGCTTTTTTGTCAAAATAGt < 2:696828/134‑1 (MQ=255)
aTCACCTTTATT‑CACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATTAAAAGACAACAGAAACTTATTGAAGAAATAATCTTCTGCTTTTTTGTCa < 1:1643051/133‑1 (MQ=255)
aTCACCTTTATT‑CACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATTAAAAGACAACAGAAACTTATTGAAGAAATAATCTTCTGCTTTTTTGTCa > 2:1643051/1‑133 (MQ=255)
cTTTATT‑CACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATTAAAAGACAACAGAAACTTATTGAAGAAATAATCTTCTGCTTTTTTGTCAAAATAGTGAGCa > 2:1028018/1‑140 (MQ=255)
tttATT‑CACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATTAAAAGACAACAGAAACTTATTGAAGAAATAATCTTCTGCTTTTTTGTCAAAATAGTGAGCAt > 1:969419/1‑140 (MQ=255)
tATT‑CACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATTAAAAGACAACAGAAACTTATTGAAGAAATAATCTTCTGCTTTTTTGTCAAAATAGTGAGCATTg > 2:1234224/1‑140 (MQ=255)
tATT‑CACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATTAAAAGACAACAGAAACTTATTGAAGAAATAATCTTCTGCTTTTTTGTCAAAATAGTGAGCATTg < 1:1515155/140‑1 (MQ=255)
tt‑CACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATTAAAAGACAACAGAAACTTATTGAAGAAATAATCTTCTGCTTTTTTGTCAAAATAGTGAGCATTGAt < 1:984055/140‑1 (MQ=255)
tt‑CACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATTAAAAGACAACAGAAACTTATTGAAGAAATAATCTTCTGCTTTTTTGTCAAAATAGTGAGCATTGAt < 2:1554958/140‑1 (MQ=255)
tacacaCCCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATTAAAAGACAACAGAAACTTATTGAAGAAATAATCTTCTGCTTTTTTGTCAAAATAGTGAGCATTGAt < 2:1631071/138‑1 (MQ=255)
t‑CACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATTAAAAGACAACAGAAACTTATTGAAGAAATAATCTTCTGCTTTTTTGTCAAAATAGTGAGCATTGAtt < 2:969419/140‑1 (MQ=255)
t‑CACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATTAAAAGACAACAGAAACTTATTGAAGAAATAATCTTCTGCTTTTTTGTCAAAATAGTGAGCATTGAtt < 2:932449/140‑1 (MQ=255)
t‑CACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATTAAAAGACAACAGAAACTTATTGAAGAAATAATCTTCTGCTATTTTGTCAAAATAGTGAGCATTGAtt < 1:609772/140‑1 (MQ=255)
caacacCCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATTAAAAGACAACAGAAACTTATTGAAGAAATAATCTTCTGCTTTTTTGTCAAAATAGTGAGCATTGAtt < 1:106165/138‑1 (MQ=255)
caacaTCCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATTAAAAGACAACAGAAACTTATTGAAGAAATAATCTTCTGCTTTTTTGTCAAAATAGTGAGCATTGAtt < 1:574455/138‑1 (MQ=255)
aaCCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATTAAAAGACAACAGAAACTTATTGAAGAAATAATCTTCTGCTTTTTTGTCAAAATAGTGAGCATTGATTTTAt > 1:1432884/1‑140 (MQ=255)
aaCCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATTAAAAGACAACAGAAACTTATTGAAGAAATAATCTTCTGCTTTTTTGTCAAAATAGTGAGCATTGATTTTAt > 2:1079640/1‑140 (MQ=255)
aaCCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATTAAAAGACAACAGAAACTTATTGAAGAAATAATCTTCTGCTTTTTTGTCAAAATAGTGAGCATTGATTTTAt > 1:1567042/1‑140 (MQ=255)
aaCCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATTAAAAGACAACAGAAACTTATTGAAGAAATAATCTTCTGCTTTTTTGTCAAAATAGTGAGCATTGATTTTAt > 2:1402599/1‑140 (MQ=255)
aaCCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATTAAAAGACAACAGAAACTTATTGAAGAAATAATCTTCTGCTTTTTTGTCAAAATAGTGAGCATTGATTTTAt > 2:596685/1‑140 (MQ=255)
ccgccgCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTTAGGGATTAAAAGACAACAGAAACTTATTGAAGAAATAATCTTCAGCTTTTTTGTCAAAATAGTGAGCATTGATTTTATCt > 2:348742/1‑140 (MQ=255)
ccgccgCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATTAAAAGACAACAGAAACTTATTGAAGAAATAATCTTCTGCTTTTTTGTCAAAATAGTGAGCATTGATTTTATCt > 2:575819/1‑140 (MQ=255)
gccgcACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATTAAAAGACAACAGAAACTTATTGAAGAAATAATCTTCTGCTTTTTTGTCAAAATAGTGAGCATTGATTTTATCtat < 2:1686295/140‑1 (MQ=255)
ccgcACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATTAAAAGACAACAGAAACTTATTGAAGAAATAATCTTCTGCTTTTTTGTCAAAATAGTGAGCATTGATTTTATCtata > 1:255568/1‑140 (MQ=255)
aGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATTAAAAGACAACAGAAACTTATTGAAGAAATAATCTTCTGCTTTTTTGTCAAAATAGTGAGCATTGATTTTATCTATAGCGGTTg < 1:1234224/140‑1 (MQ=255)
gCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATTAAAAGACAACAGAAACTTATTGAAGAAATAATCTTCTGCTTTTTTGTCAAAATAGTGAGCATTGATTTTATCTATAGCGGTTGa > 1:915536/1‑140 (MQ=255)
cGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATTAAAAGACAACAGAAACTTATTGAAGAAATAATCTTCTGCTTTTTTGTCAAAATAGTGAGCATTGATTTTATCTATAGCGGTTGAAt < 1:701133/140‑1 (MQ=255)
cGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATTAAAAGACAACAGAAACTTATTGAAGAAATAATCTTCTGCTTTTTTGTCAAAATAGTGAGCATTGATTTTATCTATAGCGGTTGAAt < 1:1402599/140‑1 (MQ=255)
gTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATTAAAAGACAACAGAAACTTATTGAAGAAATAATCTTCTGCTTTTTTGTCAAAATAGTGAGCATTGATTTTATCTATAGCGGTTGAATc < 2:1432884/140‑1 (MQ=255)
ccGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATTAAAAGACAACAGAAACTTATTGAAGAAATAATCTTCTGCTTTTTTGTCAAAATAGTGAGCATTGATTTTATCTATAGCGGTTGAATCttt > 1:828142/1‑140 (MQ=255)
cAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATTAAAAGACAACAGAAACTTATTGAAGAAATAATCTTCTGCTTTTTTGTCAAAATAGTGAGCATTGATTTTATCTATAGCGGTTGAATCTTTTCCAGc < 2:319004/140‑1 (MQ=255)
cAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATTAAAAGACAACAGAAACTTATTGAAGAAATAATCTTCTGCTTTTTTGTCAAAATAGTGAGCATTGATTTTATCTATAGCGGTTGAATCTTTTCCAGc > 1:319004/1‑140 (MQ=255)
cAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATTAAAAGACAACAGAAACTTATTGAAGAAATAATCTTCTGCTTTTTTGTCAAAATAGTGAGCATTGATTTTATCTATAGCGGTTGAATCTTTTCCAGc < 1:463824/140‑1 (MQ=255)
aGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATTAAAAGACAACAGAAACTTATTGAAGAAATAATCTTCTGCTTTTTTGTCAAAATAGTGAGCATTGATTTTATCTATAGCGGTTGAATCTTTTCCAGcc < 1:1314085/140‑1 (MQ=255)
aGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATTAAAAGACAACAGAAACTTATTGAAGAAATAATCTTCTGCTTTTTTGTCAAAATAGTGAGCATTGATTTTATCTATAGCGGTTGAATCTTTTCCAGcc < 1:23861/140‑1 (MQ=255)
gggCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATTAAAAGACAACAGAAACTTATTGAAGAAATAATCTTCTGCTTTTTTGTCAAAATAGTGAGCATTGATTTTATCTATAGCGGTTGAATCTTTTCCAGCCt > 1:776379/1‑140 (MQ=255)
gggCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATTAAAAGACAACAGAAACTTATTGAAGAAATAATCTTCTGCTTTTTTGTCAAAATAGTGAGCATTGATTTTATCTATAGCGGTTGAATCTTTTCCAGCCt > 1:1700880/1‑140 (MQ=255)
ggCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATTAAAAGACAACAGAAACTTATTGAAGAAATAATCTTCTGCTTTTTTGTCAAAATAGTGAGCATTGATTTTATCTATAGCGGTTGAATCTTTTCCAGCCTc > 2:1084940/1‑140 (MQ=255)
ggCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATTAAAAGACAACAGAAACTTATTGAAGAAATAATCTTCTGCTTTTTTGTCAAAATAGTGAGCATTGATTTTATCTATAGCGGTTGAATCTTTTCCAGCCTc > 1:1141201/1‑140 (MQ=255)
gATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATTAAAAGACAACAGAAACTTATTGAAGAAATAATCTTCTGCTTTTTTGTCAAAATAGTGAGCATTGATTTTATCTATAGCGGTTGAATCTTTTCCAGCCTCGtt < 2:1141201/140‑1 (MQ=255)
aTTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATTAAAAGACAACAGAAACTTATTGAAGAAATAATCTTCTGCTTTTTTGTCAAAATAGTGAGCATTGATTTTATCTATAGCGGTTGAATCTTTTCCAGcc < 1:33053/134‑1 (MQ=255)
aTTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATTAAAAGACAACAGAAACTTATTGAAGAAATAATCTTCTGCTTTTTTGTCAAAATAGTGAGCATTGATTTTATCTATAGCGGTTGAATCTTTTCCAGcc > 2:33053/1‑134 (MQ=255)
aTTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATTAAAAGACAACAGAAACTTATTGAAGAAATAATCTTCTGCTTTTTTGTCAAAATAGTGAGCATTGATTTTATCTATAGCGGTTGAATCTTTTCCAGCCTCGTTg > 2:1259639/1‑140 (MQ=255)
aTTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATTAAAAGACAACAGAAACTTATTGAAGAAATAATCTTCTGCTTTTTTGTCAAAATAGTGAGCATTGATTTTATCTATAGCGGTTGAATCTTTTCCAGCCTCGTTg > 2:275468/1‑140 (MQ=255)
aTTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATTAAAAGACAACAGAAACTTATTGAAGAAATAATCTTCTGCTTTTTTGTCAAAATAGTGAGCATTGATTTTATCTATAGCGGTTGAATCTTTTCCAGCCTCGTTg > 1:654718/1‑140 (MQ=255)
aTTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATTAAAAGACAACAGAAACTTATTGAAGAAATAATCTTCTGCTTTTTTGTCAAAATAGTGAGCATTGATTTTATCTATAGCGGTTGAATCTTTTCCAGCCTCGTTg > 1:749953/1‑140 (MQ=255)
aTTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATTAAAAGACAACAGAAACTTATTGAAGAAATAATCTTCTGCTTTTTTGTCAAAATAGTGAGCATTGATTTTATCTATAGCGGTTGAATCTTTTCCAGCCTCGTTg > 1:1121111/1‑140 (MQ=255)
ttCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATTAAAAGACAACAGAAACTTATTGAAGAAATAATCTTCTGCTTTTTTGTCAAAATAGTGAGCATTGATTTTATCTATAGCGGTTGAATCTTTTCCAGCCTCGTTga > 2:7569/1‑140 (MQ=255)
tCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATTAAAAGACAACAGAAACTTATTGAAGAAATAATCTTCTGCTTTTTTGTCAAAATAGTGAGCATTGATTTTATCTATAGCGGTTGAATCTTTTCCAGCCTCGTTgag > 1:42339/1‑140 (MQ=255)
gCCAGCGTAACTCCATTGCTGTGTTGAGGGATTAAAAGACAACAGAAACTTATTGAAGAAATAATCTTCTGCTTTTTTGTCAAAATAGTGAGCATTGATTTTATCTATAGCGGTTGAATCTTTTCCAGCCTCGTTGAGAt < 2:1456573/140‑1 (MQ=255)
aCTCCATTGCTGTGTTGAGGGATTAAAAGACAACAGAAACTTATTGAAGAAATAATCTTCTGCTTTTTTGTCAAAATAGTGAGCATTGATTTTATCTATAGCGGTTGAATCTTTTCCAGCCTCGTTGAGATCTTCAAAAt > 1:920862/1‑140 (MQ=255)
tCCATTGCTGTGTTGAGGGATTAAAAGACAACAGAAACTTATTGAAGAAATAATCTTCTGCTTTTTTGTCAAAATAGTGAGCATTGATTTTATCTATAGCGGTTGAATCTTTTCCAGCCTCGTTGAGATCTTCAAAATAg < 1:1020880/140‑1 (MQ=255)
ttGCTGTGTTGAGGGATTAAAAGACAACAGAAACTTATTGAAGAAATAATCTTCTGCTTTTTTGTCAAAATAGTGAGCATTGATTTTATCTATAGCGGTTGAATCTTTTCCAGCCTCGTTGAGATCTTCAAAATAGCCAt < 2:749953/140‑1 (MQ=255)
ttGCTGTGTTGAGGGATTAAAAGACAACAGAAACTTATTGAAGAAATAATCTTCTGCTTTTTTGTCAAAATAGTGAGCATTGATTTTATCTATAGCGGTTGAATCTTTTCCAGCCTCGTTGAGATCTTCAAAATAGCCAt < 1:596685/140‑1 (MQ=255)
gtgtTGAGGGATTAAAAGACAACAGAAACTTATTGAAGAAATAATCTTCTGCTTTTTTGTCAAAATAGTGAGCATTGATTTTATCTATAGCGGTTGAATCTTTTCCAGCCTCGTTGAGATCTTCAAAATa < 2:932344/130‑1 (MQ=255)
gtgtTGAGGGATTAAAAGACAACAGAAACTTATTGAAGAAATAATCTTCTGCTTTTTTGTCAAAATAGTGAGCATTGATTTTATCTATAGCGGTTGAATCTTTTCCAGCCTCGTTGAGATCTTCAAAATa > 1:932344/1‑130 (MQ=255)
gtgtTGAGGGATTAAAAGACAACAGAAACTTATTGAAGAAATAATCTTCTGCTTTTTTGTCAAAATAGTGAGCATTGATTTTATCTATAGCGGTTGAATCTTTTCCAGCCTCGTTGAGATCTTCAAAATAGCCATTGAAg < 1:1625783/140‑1 (MQ=255)
tgtTGAGGGATTAAAAGACAACAGAAACTTATTGAAGAAATAATCTTCTGCTTTTTTGTCAAAATAGTGAGCATTGATTTTATCTATAGCGGTTGAATCTTTTCCAGCCTCGTTGAGATCTTCAAAATAGCCATTGAAg < 1:1318179/139‑1 (MQ=255)
tgtTGAGGGATTAAAAGACAACAGAAACTTATTGAAGAAATAATCTTCTGCTTTTTTGTCAAAATAGTGAGCATTGATTTTATCTATAGCGGTTGAATCTTTTCCAGCCTCGTTGAGATCTTCAAAATAGCCATTGAAg > 2:1318179/1‑139 (MQ=255)
tgtTGAGGGATTAAAAGACAACAGAAACTTATTGAAGAAATAATCTTCTGCTTTTTTGTCAAAATAGTGAGCATTGATTTTATCTATAGCGGTTGAATCTTTTCCAGCCTCGTTGAGATCTTCAAAATAGCCATTGAAGa > 1:296266/1‑140 (MQ=255)
gAGGGATTAAAAGACAACAGAAACTTATTGAAGAAATAATCTTCTGCTTTTTTGTCAAAATAGTGAGCATTGATTTTATCTATAGCGGTTGAATCTTTTCCAGCCTCGTTGAGATCTTCAAAATAGCCATTGAAGATAtt < 1:1259639/140‑1 (MQ=255)
aGGGATTAAAAGACAACAGAAACTTATTGAAGAAATAATCTTCTGCTTTTTTGTCAAAATAGTGAGCATTGATTTTATCTATAGCGGTTGAATCTTTTCCAGCCTCGTTGAGATCTTCAAAATAGCCATTGAAGata > 2:1634844/1‑137 (MQ=255)
aGGGATTAAAAGACAACAGAAACTTATTGAAGAAATAATCTTCTGCTTTTTTGTCAAAATAGTGAGCATTGATTTTATCTATAGCGGTTGAATCTTTTCCAGCCTCGTTGAGATCTTCAAAATAGCCATTGAAGata < 1:1634844/137‑1 (MQ=255)
aGGGATTAAAAGACAACAGAAACTTATTGAAGAAATAATCTTCTGCTTTTTTGTCAAAATAGTGAGCATTGATTTTATCTATAGCGGTTGAATCTTTTCCAGCCTCGTTGAGATCTTCAAAATAGCCATTGAAGATATTc > 2:881797/1‑140 (MQ=255)
|
GCATCCGTTCGCAATCCTGGTTTGGCTTCGCCATT‑AATAAGCCAGG‑TTTTATCACCTTTATT‑CACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCAAAAGACAACAGAAACTTATTGAAGAAATAATCTTCTGCTTTTTTGTCAAAATAGTGAGCATTGATTTTATCTATAGCGGTTGAATCTTTTCCAGCCTCGTTGAGATCTTCAAAATAGCCATTGAAGATATTC > NC_000913/4538056‑4538322
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
