Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A7 F28 I1 R1 183 98.6 3427438 96.9% 3321187 138.7

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 1,444,662 A→G T538A (ACC→GCC)  ydbH → PF11739 family protein YdbH

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,444,6620AG100.0% 253.6 / NA 68T538A (ACC→GCC) ydbHPF11739 family protein YdbH
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base G (30/38);  total (30/38)

CATCGTCTGGGTACGTGACGCACAGCATCCCTCCTTTAGCGGCGCGCTGTCACTGGACGCCGGGCAAACGCTGTTCACTGGCGGCAGTGTGTTACCGCCATCAACCTTAAAATTTAGCGTCGATGGGCGCGATCCTACCTATTTCCTCTTTAAAGGCGATTTACATGCTGGTGAGATTGGCCCGGTTCGGGTAAATGGTCGCTGGGACGGTATTCGTCTGCGCGGTAACGCCTG‑‑GTGGCCTAAACAATCACTGACCGTATTCCAG  >  NC_000913/1444526‑1444790
                                                                                                                                        |                                                                                                                                  
cATCGTCTGGGTACGTGACGCACAGCATCCCTCCTTTAGCGGCGCGCTGTCACTGGACGCCGGGCAAACGCTGTTCACTGGCGGCAGTGTGTTACCGCCATCAACCTTAAAATTTAGCGTCGATGGGCGCGATcctgcct                                                                                                                                 <  1:209402/140‑1 (MQ=255)
  tCGTCTGGGTACGTGACGCACAGCATCCCTCCTTTAGCGGCGCGCTGTCACTGGACGCCGGGCAAACGCTGTTCACTGGCGGCAGTGTGTTACCGCCATCAACCTTAAAATTTAGCGTCGATGGGCGCGATCCTGCCTAt                                                                                                                               >  2:1262618/1‑140 (MQ=255)
     tCTGGGTACGTGACGCACAGCATCCCTCCTTTAGCGGCGCGCTGTCACTGGACGCCGGGCAAACGCTGTTCACTGGCGGCAGTGTGTTACCGCCATCAACCTTAAAATTTAGCGTCGATGGGCGCGATCCTGCCTATTTc                                                                                                                            <  2:1248143/140‑1 (MQ=255)
     tCTGGGTACGTGACGCACAGCATCCCTCCTTTAGCGGCGCGCTGTCACTGGACGCCGGGCAAACGCTGTTCACTGGCGGCAGTGTGTTACCGCCATCAACCTTAAAATTTAGCGTCGATGGGCGCGATCCTGCCTATTTc                                                                                                                            <  1:848838/140‑1 (MQ=255)
      cTGGGTACGTGACGCACAGCATCCCTCCTTTAGCGGCGCGCTGTCACTGGACGCCGGGCAAACGCTGTTCACTGGCGGCAGTGTGTTACCGCCATCAACCTTAAAATTTAGCGTCGATGGGCGCGATCCTGCCTATTTcc                                                                                                                           <  1:948530/140‑1 (MQ=255)
           tACGTGACGCACAGCATCCCTCCTTTAGCGGCGCGCTGTCACTGGACGCCGGGCAAACGCTGTTCACTGGCGGCAGTGTGTTACCGCCATCAACCTTAAAATTTAGCGTCGATGGGCGCGATCCTGCCTATTTCCTCttt                                                                                                                      >  1:1579862/1‑140 (MQ=255)
            aCGTGACGCACAGCATCCCTCCTTTAGCGGCGCGCTGTCACTGGACGCCGGGCAAACGCTGTTCACTGGCGGCAGTGTGTTACCGCCATCAACCTTAAAATTTAGCGTCGATGGGCGCGATCCTGCCTATTTCCTCTTTa                                                                                                                     <  1:797353/140‑1 (MQ=255)
            aCGTGACGCACAGCATCCCTCCTTTAGCGGCGCGCTGTCACTGGACGCCGGGCAAACGCTGTTCACTGGCGGCAGTGTGTTACCGCCATCAACCTTAAAATTTAGCGTCGATGGGCGCGATCCTGCCTATTTCCTCTTTa                                                                                                                     >  2:501600/1‑140 (MQ=255)
              gTGACGCACAGCATCCCTCCTTTAGCGGCGCGCTGTCACTGGACGCCGGGCAAACGCTGTTCACTGGCGGCAGTGTGTTACCGCCATCAACCTTAAAATTTAGCGTCGATGGGCGCGATCCTGCCTATTTCCTCTTTaaa                                                                                                                   >  2:1631904/1‑140 (MQ=255)
              gTGACGCACAGCATCCCTCCTTTAGCGGCGCGCTGTCACTGGACGCCGGGCAAACGCTGTTCACTGGCGGCAGTGTGTTACCGCCATCAACCTTAAAATTTAGCGTCGATGGGCGCGATCCTGCCTATTTCCTCTTTaaa                                                                                                                   >  1:1116057/1‑140 (MQ=255)
                gACGCACAGCATCCCTCCTTTAGCGGCGCGCTGTCACTGGACGCCGGGCAAACGCTGTTCACTGGCGGCAGTGTGTTACCGCCATCAACCTTAAAATTTAGCGTCGATGGGCGCGATCCTGCCTATTTCCTCTTTAAAgg                                                                                                                 <  1:1529610/140‑1 (MQ=255)
                 aCGCACAGCATCCCTCCTTTAGCGGCGCGCTGTCACTGGACGCCGGGCAAACGCTGTTCACTGGCGGCAGTGTGTTACCGCCATCAACCTTAAAATTTAGCGTCGATGGGCGCGATCCTGCCTATTTCCTCTTTAAAGGc                                                                                                                <  2:1176516/140‑1 (MQ=255)
                 aCGCACAGCATCCCTCCTTTAGCGGCGCGCTGTCACTGGACGCCGGGCAAACGCTGTTCACTGGCGGCAGTGTGTTACCGCCATCAACCTTAAAATTTAGCGTCGATGGGCGCGATCCTGCCTATTTCCTCTTTAAAGGc                                                                                                                <  2:11689/140‑1 (MQ=255)
                 aCGCACAGCATCCCTCCTTTAGCGGCGCGCTGTCACTGGACGCCGGGCAAACGCTGTTCACTGGCGGCAGTGTGTTACCGCCATCAACCTTAAAATTTAGCGTCGATGGGCGCGATCCTGCCTATTTCCTCTTTAAAGGc                                                                                                                <  1:1563388/140‑1 (MQ=255)
                      caGCATCCCTCCTTTAGCGGCGCGCTGTCACTGGACGCCGGGCAAACGCTGTTCACTGGCGGCAGTGTGTTACCGCCATCAACCTTAAAATTTAGCGTCGATGGGCGCGATCCTGCCTATTTCCTCTTTAAAGGCGAttt                                                                                                           <  1:1262618/140‑1 (MQ=255)
                      caGCATCCCTCCTTTAGCGGCGCGCTGTCACTGGACGCCGGGCAAACGCTGTTCACTGGCGGCAGTGTGTTACCGCCATCAACCTTAAAATTTAGCGTCGATGGGCGCGATCCTGCCTATTTCCTCTTTAAAGGCGAttt                                                                                                           <  1:501600/140‑1 (MQ=255)
                      caGCATCCCTCCTTTAGCGGCGCGCTGTCACTGGACGCCGGGCAAACGCTGTTCACTGGCGGCAGTGTGTTACCGCCATCAACCTTAAAATTTAGCGTCGATGGGCGCGATCCTGCCTATTTCCTCTTTAAAGGCGAttt                                                                                                           <  2:368267/140‑1 (MQ=255)
                      caGCATCCCTCCTTTAGCGGCGCGCTGTCACTGGACGCCGGGCAAACGCTGTTCACTGGCGGCAGTGTGTTACCGCCATCAACCTTAAAATTTAGCGTCGATGGGCGCGATCCTGCCTATTTCCTCTTTAAAGGCGAttt                                                                                                           <  2:486068/140‑1 (MQ=255)
                        gCATCCCTCCTTTAGCGGCGCGCTGTCACTGGACGCCGGGCAAACGCTGTTCACTGGCGGCAGTGTGTTACCGCCATCAACCTTAAAATTTAGCGTCGATGGGCGCGATCCTGCCTATTTCCTCTTTAAAGGCGATTTAc                                                                                                         <  1:1070950/140‑1 (MQ=255)
                         cATCCCTCCTTTAGCGGCGCGCTGTCACTGGACGCCGGGCAAACGCTGTTCACTGGCGGCAGTGTGTTACCGCCATCAACCTTAAAATTTAGCGTCGATGGGCGCGATCCTGCCTATTTCCTCTTTAAAGGCGATTTACa                                                                                                        <  1:933073/140‑1 (MQ=255)
                         cATCCCTCCTTTAGCGGCGCGCTGTCACTGGACGCCGGGCAAACGCTGTTCACTGGCGGCAGTGTGTTACCGCCATCAACCTTAAAATTTAGCGTCGATGGGCGCGATCCTGCCTATTTCCTCTTTAAAGGCGATTTACa                                                                                                        <  2:175144/140‑1 (MQ=255)
                                         gcgcgcTGTCACTGGACGCCGGGCAAACGCTGTTCACTGGCGGCAGTGTGTTACCGCCATCAACCTTAAAATTTAGCGTCGATGGGCGCGATCCTGCCTATTTCCTCTTTAAAGGCGATTTACATGCTGGTGAGATTGGc                                                                                        >  1:1366909/1‑140 (MQ=255)
                                          cgcgcTGTCACTGGACGCCGGGCAAACGCTGTTCACTGGCGGCAGTGTGTTACCGCCATCAACCTTAAAATTTAGCGTCGATGGGCGCGATCCTGCCTATTTCCTCTTTAAAGGCGATTTACATGCTGGTGAGATTGGcc                                                                                       <  2:2332/140‑1 (MQ=255)
                                          cgcgcTGTCACTGGACGCCGGGCAAACGCTGTTCACTGGCGGCAGTGTGTTACCGCCATCAACCTTAAAATTTAGCGTCGATGGGCGCGATCCTGCCTATTTCCTCTTTAAAGGCGATTTACATGCTGGTGAGATTGGcc                                                                                       <  1:61102/140‑1 (MQ=255)
                                           gcgcTGTCACTGGACGCCGGGCAAACGCTGTTCACTGGCGGCAGTGTGTTACCGCCATCAACCTTAAAATTTAGCGTCGATGGGCGCGATCCTGCCTATTTCCTCTTTAAAGGCGATTTACATGCTGGTGAGATTGGccc                                                                                      >  2:1609937/1‑140 (MQ=255)
                                           gcgcTGTCACTGGACGCCGGGCAAACGCTGTTCACTGGCGGCAGTGTGTTACCGCCATCAACCTTAAAATTTAGCGTCGATGGGCGCGATCCTGCCTATTTCCTCTTTAAAGGCGATTTACATGCTGGTGAGATTGGc                                                                                        <  2:931311/138‑1 (MQ=255)
                                           gcgcTGTCACTGGACGCCGGGCAAACGCTGTTCACTGGCGGCAGTGTGTTACCGCCATCAACCTTAAAATTTAGCGTCGATGGGCGCGATCCTGCCTATTTCCTCTTTAAAGGCGATTTACATGCTGGTGAGATTGGc                                                                                        >  1:931311/1‑138 (MQ=255)
                                             gcTGTCACTGGACGCCGGGCAAACGCTGTTCACTGGCGGCAGTGTGTTACCGCCATCAACCTTAAAATTTAGCGTCGATGGGCGCGATCCTGCCTATTTCCTCTTTAAAGGCGATTTACATGCTGGTGAGATTGGCCCgg                                                                                    <  1:1422416/140‑1 (MQ=255)
                                               tGTCACTGGACGCCGGGCAAACGCTGTTCACTGGCGGCAGTGTGTTACCGCCATCAACCTTAAAATTTAGCGTCGATGGGCGCGATCCTGCCTATTTCCTCTTTAAAGGCGATTTACATGCTGGTGAGATTGGCCCGGtt                                                                                  <  1:426565/140‑1 (MQ=255)
                                               tGTCACTGGACGCCGGGCAAACGCTGTTCACTGGCGGCAGTGTGTTACCGCCATCAACCTTAAAATTTAGCGTCGATGGGCGCGATCCTGCCTATTTCCTCTTTAAAGGCGATTTACATGCTGGTGAGATTGGCCCGGtt                                                                                  <  2:581524/140‑1 (MQ=255)
                                                         cGCCGGGCAAACGCTGTTCACTGGCGGCAGTGTGTTACCGCCATCAACCTTAAAATTTAGCGTCGATGGGCGCGATCCTGCCTATTTCCTCTTTAAAGGCGATTTACATGCTGGTGAGATTGGCCCGGTTCGGGTAAATg                                                                        >  1:743073/1‑140 (MQ=255)
                                                         cGCCGGGCAAACGCTGTTCACTGGCGGCAGTGTGTTACCGCCATCAACCTTAAAATTTAGCGTCGATGGGCGCGATCCTGCCTATTTCCTCTTTAAAGGCGATTTACATGCTGGTGAGATTGGCCCGGTTCGGGTAAATg                                                                        >  1:1061315/1‑140 (MQ=255)
                                                           ccGGGCAAACGCTGTTCACTGGCGGCAGTGTGTTACCGCCATCAACCTTAAAATTTAGCGTCGATGGGCGCGATCCTGCCTATTTCCTCTTTAAAGGCGATTTACATGCTGGTGAGATTGGCCCGGTTCGGGTAAATGGt                                                                      <  2:1509184/140‑1 (MQ=255)
                                                           ccGGGCAAACGCTGTTCACTGGCGGCAGTGTGTTACCGCCATCAACCTTAAAATTTAGCGTCGATGGGCGCGATCCTGCCTATTTCCTCTTTAAAGGCGATTTACATGCTGGTGAGATTGGCCCGGTTCGGGTAAATGGt                                                                      >  2:224871/1‑140 (MQ=255)
                                                            cGGGCAAACGCTGTTCACTGGCGGCAGTGTGTTACCGCCATCAACCTTAAAATTTAGCGTCGATGGGCGCGATCCTGCCTATTTCCTCTTTAAAGGCGATTTACATGCTGGTGAGATTGGCCCGGTTCGGGTAAATGGTc                                                                     >  2:1136921/1‑140 (MQ=255)
                                                                   aCGCTGTTCACTGGCGGCAGTGTGTTACCGCCATCAACCTTAAAATTTAGCGTCGATGGGCGCGATCCTGCCTATTTCCTCTTTAAAGGCGATTTACATGCTGGTGAGATTGGCCCGGTTCGGGTAAATGGTCGCTGGGa                                                              <  1:949692/140‑1 (MQ=255)
                                                                   aCGCTGTTCACTGGCGGCAGTGTGTTACCGCCATCAACCTTAAAATTTAGCGTCGATGGGCGCGATCCTGCCTATTTCCTCTTTAAAGGCGATTTACATGCTGGTGAGATTGGCCCGGTTCGGGTAAATGGTCGCTGGGa                                                              <  2:1116057/140‑1 (MQ=255)
                                                                   aCGCTGTTCACTGGCGGCAGTGTGTTACCGCCATCAACCTTAAAATTTAGCGTCGATGGGCGCGATCCTGCCTATTTCCTCTTTAAAGGCGATTTACATGCTGGTGAGATTGGCCCGGTTCGGGTAAATGGTCGCTGGGa                                                              <  1:866238/140‑1 (MQ=255)
                                                                   aCGCTGTTCACTGGCGGCAGTGTGTTACCGCCATCAACCTTAAAATTTAGCGTCGATGGGCGCGATCCTGCCTATTTCCTCTTTAAAGGCGATTTACATGCTGGTGAGATTGGCCCGGTTCGGGTAAATGGTCGCTGGGa                                                              <  1:1003008/140‑1 (MQ=255)
                                                                             cTGGCGGCAGTGTGTTACCGCCATCAACCTTAAAATTTAGCGTCGATGGGCGCGATCCTGCCTATTTCCTCTTTAAAGGCGATTTACATGCTGGTGAGATTGGCCCGGTTCGGGTAAATGGTCGCTGGGACGGTATTCGt                                                    <  1:1689171/140‑1 (MQ=255)
                                                                                   gcAGTGTGTTACCGCCATCAACCTTAAAATTTAGCGTCGATGGGCGCGATCCTGCCTATTTCCTCTTTAAAGGCGATTTACATGCTGGTGAGATTGGCCCGGTTCGGGTAAATGGTCGCTGGGACGGTATTCGTCTgcgc                                              >  1:1054699/1‑140 (MQ=255)
                                                                                   gcAGTGTGTTACCGCCATCAACCTTAAAATTTAGCGTCGATGGGCGCGATCCTGCCTATTTCCTCTTTAAAGGCGATTTACATGCTGGTGAGATTGGCCCGGTTCGGGTAAATGGTCGCTGGGACGGTATTCGTCTgcgc                                              >  1:933610/1‑140 (MQ=255)
                                                                                           ttACCGCCATCAACCTTAAAATTTAGCGTCGATGGGCGCGATCCTGCCTATTTCCTCTTTAAAGGCGATTTACATGCTGGTGAGATTGGCCCGGTTCGGGTAAATGGTCGCTGGGACGGTATTCGTCTGCGCGGTAACGc                                      >  1:443278/1‑140 (MQ=255)
                                                                                              ccGCCATCAACCTTAAAATTTAGCGTCGATGGGCGCGATCCTGCCTATTTCCTCTTTAAAGGCGATTTACATGCTGGTGAGATTGGCCCGGTTCGGGTAAATGGTCGCTGGGTCGGTATTCGTCTGCGCGGTAACGCCtg                                   <  2:1002483/140‑1 (MQ=255)
                                                                                              ccGCCATCAACCTTAAAATTTAGCGTCGATGGGCGCGATCCTGCCTATTTCCTCTTTAAAGGCGATTTACATGCTGGTGAGATTGGCCCGGTTCGGGTAAATGGTCGCTGGGACGGTATTCGTCTGCGCGGTAACGCCtg                                   <  2:1061315/140‑1 (MQ=255)
                                                                                              ccGCCATCAACCTTAAAATTTAGCGTCGATGGGCGCGATCCTGCCTATTTCCTCTTTAAAGGCGATTTACATGCTGGTGAGATTGGCCCGGTTCGGGTAAATGGTCGCTGGGACGGTATTCGTCTGCGCGGTAACGCCtg                                   >  2:500361/1‑140 (MQ=255)
                                                                                              ccGCCATCAACCTTAAAATTTAGCGTCGATGGGCGCGATCCTGCCTATTTCCTCTTTAAAGGCGATTTACATGCTGGTGAGATTGGCCCGGTTCGGGTAAATGGTCGCTGGGACGGTATTCGTCTGCGCGGTAACGCCtg                                   <  2:443278/140‑1 (MQ=255)
                                                                                               cGCCATCAACCTTAAAATTTAGCGTCGATGGGCGCGATCCTGCCTATTTCCTCTTTAAAGGCGATTTACATGCTGGTGAGATTGGCCCGGTTCGGGTAAATGGTCGCTGGGACGGTATTCGTCTGCGCGGTAACGCCtg‑‑g                                >  1:1418970/1‑140 (MQ=255)
                                                                                                 ccATCAACCTTAAAATTTAGCGTCGATGGGCGCGATCCTGCCTATTTCCTCTTTAAAGGCGATTTACATGCTGGTGAGATTGGCCCGGTTCGGGTAAATGGTCGCTGGGACGGTATTCGTCTGCGCGGTAACGCCtg‑‑gtg                              >  2:697559/1‑140 (MQ=255)
                                                                                                 ccATCAACCTTAAAATTTAGCGTCGATGGGCGCGATCCTGCCTATTTCCTCTTTAAAGGCGATTTACATGCTGGTGAGATTGGCCCGGTTCGGGTAAATGGTCGCTGGGACGGTATTCGTCTGCGCGGTAACGCCtg‑‑gtg                              >  1:628580/1‑140 (MQ=255)
                                                                                                   aTCAACCTTAAAATTTAGCGTCGATGGGCGCGATCCTGCCTATTTCCTCTTTAAAGGCGATTTACATGCTGGTGAGATTGGCCCGGTTCGGGTAAATGGTCGCTGGGACGGTATTCGTCTGCGCGGTAACGCCTG‑‑GTGGc                            >  2:902056/1‑140 (MQ=255)
                                                                                                   aTCAACCTTAAAATTTAGCGTCGATGGGCGCGATCCTGCCTATTTCCTCTTTAAAGGCGATTTACATGCTGGTGAGATT‑GCCCGGTTCGGGTAAATGGTCGCTGGGACGGTATTCGTCTGCGCGGTAACGCCTG‑‑GTGGcc                           >  1:194411/1‑140 (MQ=255)
                                                                                                    tCAACCTTAAAATTTAGCGTCGATGGGCGCGATCCTGCCTATTTCCTCTTTAAAGGCGATTTACATGCTGGTGAGATTGGCCCGGTTCGGGTAAATGGTCGCTGGGACGGTATTCGTCTGCGCGGTAACGCCTG‑‑GTGGcc                           <  2:628580/140‑1 (MQ=255)
                                                                                                    tCAACCTTAAAATTTAGCGTCGATGGGCGCGATCCTGCCTATTTCCTCTTTAAAGGCGATTTACATGCTGGTGAGATTGGCCCGGTTCGGGTAAATGGTCGCTGGGACGGTATTCGTCTGCGCGGTAACGCCTG‑‑GTGGcc                           <  2:743073/140‑1 (MQ=255)
                                                                                                    tCAACCTTAAAATTTAGCGTCGATGGGCGCGATCCTGCCTATTTCCTCTTTAAAGGCGATTTACATGCTGGTGAGATTGGCCCGGTTCGGGTAAATGGTCGCTGGGACGGTATTCGTCTGCGCGGTAACGCCTG‑‑GTGGcc                           <  2:1366909/140‑1 (MQ=255)
                                                                                                     cAACCTTAAAATTTAGCGTCGATGGGCGCGATCCTGCCTATTTCCTCTTTAAAGGCGATTTACATGCTGGTGAGATTGGCCCGGTTCGGGTAAATGGTCGCTGGGACGGTATTCGTCTGCGCGGTAACGCCtg‑‑g                                <  2:730702/134‑1 (MQ=255)
                                                                                                     cAACCTTAAAATTTAGCGTCGATGGGCGCGATCCTGCCTATTTCCTCTTTAAAGGCGATTTACATGCTGGTGAGATTGGCCCGGTTCGGGTAAATGGTCGCTGGGACGGTATTCGTCTGCGCGGTAACGCCtg‑‑g                                >  1:730702/1‑134 (MQ=255)
                                                                                                        ccTTAAAATTTAGCGTCGATGGGCGCGATCCTGCCTATTTCCTCTTTAAAGGCGATTTACATGCTGGTGAGATTGGCCCGGTTCGGGTAAATGGTCGCTGGGACGGTATTCGTCTGCGCGGTAACGCCTG‑‑GTGGCCTaaa                       >  1:402066/1‑140 (MQ=255)
                                                                                                           tAAAATTTAGCGTCGATGGGCGCGATCCTGCCTATTTCCTCTTTAAAGGCGATTTACATGCTGGTGAGATTGGCCCGGTTCGGGTAAATGGTCGCTGGGACGGTATTCGTCTGCGCGGTAACGCCtg                                   <  2:1333489/127‑1 (MQ=255)
                                                                                                           tAAAATTTAGCGTCGATGGGCGCGATCCTGCCTATTTCCTCTTTAAAGGCGATTTACATGCTGGTGAGATTGGCCCGGTTCGGGTAAATGGTCGCTGGGACGGTATTCGTCTGCGCGGTAACGCCTG‑‑GTGGCCTAAACaa                    >  2:932400/1‑140 (MQ=255)
                                                                                                           tAAAATTTAGCGTCGATAGGCGCGATCCTGCCTATTTCCTCTTTAAAGGCGATTTACATGCTGGTGAGATTGGCCCGGTTCGGGTAAATGGTCGCTGGGACGGTATTCGTCTGCGCGGTAACGCCtg                                   >  1:1333489/1‑127 (MQ=255)
                                                                                                               aTTTAGCGTCGATGGGCGCGATCCTGCCTATTTCCTCTTTAAAGGCGATTTACATGCTGGTGAGATTGGCCCGGTTCGGGTAAATGGTCGCTGGGACGGTATTCGTCTGCGCGGTAACGCCTG‑‑GTGGCCTAAACAATCAc                <  1:902056/140‑1 (MQ=255)
                                                                                                                tttAGCGTCGATGGGCGCGATCCTGCCTATTTCCTCTTTAAAGGCGATTTACATGCTGGTGAGATTGGCCCGGTTCGGGTAAATGGTCGCTGGGACGGTATTCGTCTGCGCGGTAACGCCTG‑‑GTGGCCTAAACAATCACt               <  1:224871/140‑1 (MQ=255)
                                                                                                                  tAGCGTCGATGGGCGCGATCCTGCCTATTTCCTCTTTAAAGGCGATTTACATGCTGGTGAGATTGGCCCGGTTCGGGTAAATGGTCGCTGGGACGGTATTCGTCTGCGCGGTAACGCCTG‑‑GTGGCCTAAACAATCACTGa             >  2:934119/1‑140 (MQ=255)
                                                                                                                   aGCGTCGATGGGCGCGATCCTGCCTATTTCCTCTTTAAAGGCGATTTACATGCTGGTGAGATTGGCCCGGTTCGGGTAAATGGTCGCTGGGACGGTATTCGTCTGCGCGGTAACGCCTG‑‑GTGGCCTAAACAATCACTGAc            >  1:1239625/1‑140 (MQ=255)
                                                                                                                         gATGGGCGCGATCCTGCCTATTTCCTCTTTAAAGGCGATTTACATGCTGGTGAGATTGGCCCGGTTCGGGTAAATGGTCGCTGGGACGGTATTCGTCTGCGCGGTAACGCCTGGTGTGGCCTAAACAATCACTGACCGTa        >  1:918732/1‑140 (MQ=255)
                                                                                                                          aTGGGCGCGATCCTGCCTATTTCCTCTTTAAAGGCGATTTACATGCTGGTGAGATTGGCCCGGTTCGGGTAAATGGTCGCTGGGACGGTATTCGTCTGCGCGGTAACGCCTG‑‑GTGGCCTAAACAATCACTGACCGTATTc     >  1:133179/1‑140 (MQ=255)
                                                                                                                          aTGGGCGCGATCCTGCCTATTTCCTCTTTAAAGGCGATTTACATGCTGGTGAGATTGGCCCGGTTCGGGTAAATGGTCGCTGGGACGGTATTCGTCTGCGCGGTAACGCCTG‑‑GTGGCCTAAACAATCACTGACCGTATTc     >  1:1443168/1‑140 (MQ=255)
                                                                                                                             ggCGCGATCCTGCCTATTTCCTCTTTAAAGGCGATTTACATGCTGGTGAGATTGGCCCGGTTCGGGTAAATGGTCGCTGGGACGGTATTCGTCTGCGCGGTAACGCCTG‑‑GTGGCCTAAACAATCACTGACCGTATTCCAg  <  2:108206/140‑1 (MQ=255)
                                                                                                                                        |                                                                                                                                  
CATCGTCTGGGTACGTGACGCACAGCATCCCTCCTTTAGCGGCGCGCTGTCACTGGACGCCGGGCAAACGCTGTTCACTGGCGGCAGTGTGTTACCGCCATCAACCTTAAAATTTAGCGTCGATGGGCGCGATCCTACCTATTTCCTCTTTAAAGGCGATTTACATGCTGGTGAGATTGGCCCGGTTCGGGTAAATGGTCGCTGGGACGGTATTCGTCTGCGCGGTAACGCCTG‑‑GTGGCCTAAACAATCACTGACCGTATTCCAG  >  NC_000913/1444526‑1444790

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A