Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A8 F28 I1 R1	258	142.3	4824480	99.1%	4781059	138.9

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,445,005	G→A	G652D (GGC→GAC)	ydbH →	PF11739 family protein YdbH

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,445,005	0	G	A	100.0%	382.5 / NA	111	G652D (GGC→GAC)	ydbH	PF11739 family protein YdbH
Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (47/64); total (47/64)

Only 100 of 112 total aligned reads displayed.

TGAACAAGGATTCCGCGCGGGAGGACACGGCGTGTTGAAAGGCGGTAGTGCCTGGATGCCAGATAATCAGGTTAACGGTGTCGATTTTGTCCTGCCTTTCCGTTTTGCCGATGGAGCCTGGCATCTGGGGACTCGCGGCCCCGTTACGTTGCGAATTGCCGAAGTGATTAATCTGGTGACAGCGAAAAATATTACGGCTGATTTGCAAGGGCGTTATCCGTGGACTGAAGAAGAACCCTTGCTGTTGACTGATGTTAGCGTCGATGTGTTAGG  >  NC_000913/1444868‑1445140

tGAACAAGGATTCCGCGCGGGAGGACACGGCGTGTTGAAAGGCGGTAGTGCCTGGATGCCAGATAATCAGGTTAACGGTGTCGATTTTGTCCTGCCTTTCCGTTTTGCCGATGGAGCCTGGCATCTGGGGACTCGCGAcc                                                                                                                                       <  2:70411/140‑1 (MQ=255)

    cAAGGATTCCGCGCGGGAGGACACGGCGTGTTGAAAGGCGGTAGTGCCTGGATGCCAGATAATCAGGTTAACGGTGTCGATTTTGTCCTGCCTTTCCGTTTTGCCGATGGAGCCTGGCATCTGGGGACTCGCGACCCCGt                                                                                                                                   <  2:1966736/140‑1 (MQ=255)

            ccGCGCGGGAGGACACGGCGTGTTGAAAGGCGGTAGTGCCTGGATGCCAGATAATCAGGTTAACGGTGTCGATTTTGTCCTGCCTTTCCGTTTTGCCGATGGAGCCTGGCATCTGGGGACTCGCGACCCCGTTACGTTGc                                                                                                                           >  1:1196955/1‑140 (MQ=255)

             cgcgcgGGAGGACACGGCGTGTTGAAAGGCGGTAGTGCCTGGATGCCAGATAATCAGGTTAACGGTGTCGATTTTGTCCTGCCTTTCCGTTTTGCCGATGGAGCCTGGCATCTGGGGACTCGCGACCCCGTTACGTTGCg                                                                                                                          <  2:1686286/140‑1 (MQ=255)

             cgcgcgGGAGGACACGGCGTGTTGAAAGGCGGTAGTGCCTGGATGCCAGATAATCAGGTTAACGGTGTCGATTTTGTCCTGCCTTTCCGTTTTGCCGATGGAGCCTGGCATCTGGGGACTCGCGACCCCGTTACGTTGCg                                                                                                                          >  1:1992645/1‑140 (MQ=255)

               cgcgGGAGGACACGGCGTGTTGAAAGGCGGTAGTGCCTGGATGCCAGATAATCAGGTTAACGGTGTCGATTTTGTCCTGCCTTTCCGTTTTGCCGATGGAGCCTGGCATCTGGGGACTCGCGACCCCGTTACGTTGCGaa                                                                                                                        >  1:812763/1‑140 (MQ=255)

               cgcgGGAGGACACGGCGTGTTGAAAGGCGGTAGTGCCTGGATGCCAGATAATCAGGTTAACGGTGTCGATTTTGTCCTGCCTTTCCGTTTTGCCGATGGAGCCTGGCATCTGGGGACTCGCGACCCCGTTACGTTGCGaa                                                                                                                        <  2:1285594/140‑1 (MQ=255)

                 cgGGAGGACACGGCGTGTTGAAAGGCGGTAGTGCCTGGATGCCAGATAATCAGGTTAACGGTGTCGATTTTGTCCTGCCTTTCCGTTTTGCCGATGGAGCCTGGCATCTGGGGACTCGCGACCCCGTTACGTTGCGAAtt                                                                                                                      <  2:1323639/140‑1 (MQ=255)

                     aggaCACGGCGTGTTGAAAGGCGGTAGTGCCTGGATGCCAGATAATCAGGTTAACGGTGTCGATTTTGTCCTGCCTTTCCGTTTTGCCGATGGAGCCTGGCATCTGGGGACTCGCGACCCCGTTACGTTGCGAATTGCCg                                                                                                                  <  2:1865746/140‑1 (MQ=255)

                     aggaCACGGCGTGTTGAAAGGCGGTAGTGCCTGGATGCCAGATAATCAGGTTAACGGTGTCGATTTTGTCCTGCCTTTCCGTTTTGCCGATGGAGCCTGGCATCTGGGGACTCGCGACCCCGTTACGTTGCGAATTGCCg                                                                                                                  <  1:263437/140‑1 (MQ=255)

                     aggaCACGGCGTGTTGAAAGGCGGTAGTGCCTGGATGCCAGATAATCAGGTTAACGGTGTCGATTTTGTCCTGCCTTTCCGTTTTGCCGATGGAGCCTGGCATCTGGGGACTCGCGACCCCGTTACGTTGCGAATTGCCg                                                                                                                  <  1:1152709/140‑1 (MQ=255)

                      ggaCACGGCGTGTTGAAAGGCGGTAGTGCCTGGATGCCAGATAATCAGGTTAACGGTGTCGATTTTGTCCTGCCTTTCCGTTTTGCCGATGGAGCCTGGCATCTGGGGACTCGCGACCCCGTTACGTTGCGAATTGCCGa                                                                                                                 <  2:1196955/140‑1 (MQ=255)

                      ggaCACGGCGTGTTGAAAGGCGGTAGTGCCTGGATGCCAGATAATCAGGTTAACGGTGTCGATTTTGTCCTGCCTTTCCGTTTTGCCGATGGAGCCTGGCATCTGGGGACTCGCGACCCCGTTACGTTGCGAATTGCCGa                                                                                                                 <  2:344321/140‑1 (MQ=255)

                      ggaCACGGCGTGTTGAAAGGCGGTAGTGCCTGGATGCCAGATAATCAGGTTAACGGTGTCGATTTTGTCCTGCCTTTCCGTTTTGCCGATGGAGCCTGGCATCTGGGGACTCGCGACCCCGTTACGTTGCGAATTGCCGa                                                                                                                 <  2:1220673/140‑1 (MQ=255)

                      ggaCACGGCGTGTTGAAAGGCGGTAGTGCCTGGATGCCAGATAATCAGGTTAACGGTGTCGATTTTGTCCTGCCTTTCCGTTTTGCCGATGGAGCCTGGCATCTGGGGACTCGCGACCCCGTTACGTTGCGAATTGCCGa                                                                                                                 <  1:940972/140‑1 (MQ=255)

                           cGGCGTGTTGAAAGGCGGTAGTGCCTGGATGCCAGATAATCAGGTTAACGGTGTCGATTTTGTCCTGCCTTTCCGTTTTGCCGATGGAGCCTGGCATCTGGGGACTCGCGACCCCGTTACGTTGCGAATTGCCGAAGTGa                                                                                                            <  2:1395967/140‑1 (MQ=255)

                            ggCGTGTTGAAAGGCGGTAGTGCCTGGATGCCAGATAATCAGGTTAACGGTGTCGATTTTGTCCTGCCTTTCCGTTTTGCCGATGGAGCCTGGCATCTGGGGACTCGCGACCCCGTTACGTTGCGAATTGCCGAAGTGAt                                                                                                           <  2:2128592/140‑1 (MQ=255)

                             gCGTGTTGAAAGGCGGTAGTGCCTGGATGCCAGAAAATCAGGTTAACGGTGTCGATTTTGTCCTGCCTTTCCGTTTTGCCGATGGAGCCTGGCATCTGGGGACTCGCGACCCCGTTACGTTGCGAATTGCCGAAGTGAtt                                                                                                          <  2:238560/140‑1 (MQ=255)

                              cGTGTTGAAAGGCGGTAGTGCCTGGATGCCAGATAATCAGGTTAACGGTGTCGATTTTGTCCTGCCTTTCCGTTTTGCCGATGGAGCCTGGCATCTGGGGACTCGCGACCCCGTTACGTTGCGTATTGCCGAAGTGATTa                                                                                                         >  2:1264086/1‑140 (MQ=255)

                              cGTGTTGAAAGGCGGTAGTGCCTGGATGCCAGATAATCAGGTTAACGGTGTCGATTTTGTCCTGCCTTTCCGTTTTGCCGATGGAGCCTGGCATCTGGGGACTCGCGACCCCGTTACGTTGCGAATTGCCGAAGTGATTa                                                                                                         >  2:239440/1‑140 (MQ=255)

                               gtgtTGAAAGGCGGTAGTGCCTGGATGCCAGATAATCAGGTTAACGGTGTCGATTTTGTCCTGCCTTTCCGTTTTGCCGATGGAGCCTGGCATCTGGGGACTCGCGACCCCGTTACGTTGCGAATTGCCGAAGTGATTaa                                                                                                        <  2:1359131/140‑1 (MQ=255)

                                tgtTGAAAGGCGGTAGTGCCTGGATGCCAGATAATCAGGTTAACGGTGTCGATTTTGTCCTGCCTTTCCGTTTTGCCGATGGAGCCTGGCATCTGGGGACTCGCGACCCCGTTACGTTGCGAATTGCCGAAGTGATTAAt                                                                                                       >  2:655572/1‑140 (MQ=255)

                                 gtTGAAAGGCGGTAGTGCCTGGATGCCAGATAATCAGGTTAACGGTGTCGATTTTGTCCTGCCTTTCCGTTTTGCCGATGGAGCCTGGCATCTGGGGACTCGCGACCCCGTTACGTTGCGAATTGCCGAAGTGATTAATc                                                                                                      >  2:654983/1‑140 (MQ=255)

                                 gtTGAAAGGCGGTAGTGCCTGGATGCCAGATAATCAGGTTAACGGTGTCGATTTTGTCCTGCCTTTCCGTTTTGCCGATGGAGCCTGGCATCTGGGGACTCGCGACCCCGTTACGTTGCGAATTGCCGAAGTGATTAATc                                                                                                      >  2:1104097/1‑140 (MQ=255)

                                  ttGAAAGGCGGTAGTGCCTGGATGCCAGATAATCAGGTTAACGGTGTCGATTTTGTCCTGCCTTTCCGTTTTGCCGATGGAGCCTGGCATCTGGGGACTCGCGACCCCGTTACGTTGCGAATTGCCGAAGTGATTAATCt                                                                                                     >  1:1513286/1‑140 (MQ=255)

                                       aGGCGGTAGTGCCTGGATGCCAGATAATCAGGTTAACGGTGTCGATTTTGTCCTGCCTTTCCGTTTTGCCGATGGAGCCTGGCATCTGGGGACTCGCGACCCCGTTACGTTGCGAATTGCCGAAGTGATTAATCTGGTGa                                                                                                <  1:897962/140‑1 (MQ=255)

                                         gCGGTAGTGCCTGGATGCCAGATAATCAGGTTAACGGTGTCGATTTTGTCCTGCCTTTCCGTTTTGCCGATGGAGCCTGGCATCTGGGGACTCGCGACCCCGTTACGTTGCGAATTGCCGAAGTGATTAATCTGGTGACa                                                                                              <  1:299421/140‑1 (MQ=255)

                                         gCGGTAGTGCCTGGATGCCAGATAATCAGGTTAACGGTGTCGATTTTGTCCTGCCTTTCCGTTTTGCCGATGGAGCCTGGCATCTGGGGACTCGCGACCCCGTTACGTTGCGAATTGCCGAAGTGATTAATCTGGTGACa                                                                                              <  1:970299/140‑1 (MQ=255)

                                          cGGTAGTGCCTGGATGCCAGATAATCAGGTTAACGGTGTCGATTTTGTCCTGCCTTTCCGTTTTGCCGATGGAGCCTGGCATCTGGGGACTCGCGACCCCGTTACGTTGCGAATTGCCGAAGTGATTAATCTGGTGACAg                                                                                             >  1:800533/1‑140 (MQ=255)

                                            gTAGTGCCTGGATGCCAGATAATCAGGTTAACGGTGTCGATTTTGTCCTGCCTTTCCGTTTTGCCGATGGAGCCTGGCATCTGGGGACTCGCGACCCCGTTACGTTGCGAATTGCCGAAGTGATTAATCTGGTGACAGCg                                                                                           <  2:1050885/140‑1 (MQ=255)

                                                  ccTGGATGCCAGATAATCAGGTTAACGGTGTCGATTTTGTCCTGCCTTTCCGTTTTGCCGATGGAGCCTGGCATCTGGGGACTCGCGACCCCGTTACGTTGCGAATTGCCGAAGTGATTAATCTGGTGACAGCGaaaaaa                                                                                     >  1:514690/1‑139 (MQ=255)

                                                   cTGGATGCCAGATAATCAGGTTAACGGTGTCGATTTTGTCCTGCCTTTCCGTTTTGCCGATGGAGCCTGGCATCTGGGGACTCGCGACCCCGTTACGTTGCGAATTGCCGAAGTGATTAATCTGGTGACAGCGAAAAata                                                                                    >  1:1474755/1‑140 (MQ=255)

                                                   cTGGATGCCAGATAATCAGGTTAACGGTGTCGATTTTGTCCTGCCTTTCCGTTTTGCCGATGGAGCCTGGCATCTGGGGACTCGCGACCCCGTTACGTTGCGAATTGCCGAAGTGATTAATCTGGTGACAGCGAAAAata                                                                                    >  2:2312565/1‑140 (MQ=255)

                                                      gATGCCAGATAATCAGGTTAACGGTGTCGATTTTGTCCTGCCTTTCCGTTTTGCCGATGGAGCCTGGCATCTGGGGACTCGCGACCCCGTTACGTTGCGAATTGCCGAAGTGATTAATCTGGTGACAGCGAAAAATATTa                                                                                 <  1:1527720/140‑1 (MQ=255)

                                                        tGCCAGATAATCAGGTTAACGGTGTCGATTTTGTCCTGCCTTTCCGTTTTGCCGATGGAGCCTGGCATCTGGGGACTCGCGACCCCGTTACGTTGCGAATTGCCGAAGTGATTAATCTGGTGACAGCGAAAAATATTACg                                                                               <  2:1992645/140‑1 (MQ=255)

                                                          ccAGATAATCAGGTTAACGGTGTCGATTTTGTCCTGCCTTTCCGTTTTGCCGATGGAGCCTGGCATCTGGGGACTCGCGACCCCGTTACGTTGCGAATTGCCGAAGTGATTAATCTGGTGACAGCGAAAAATATTACGGc                                                                             >  1:2258431/1‑140 (MQ=255)

                                                                   cAGGTTAACGGTGTCGATTTTGTCCTGCCTTTCCGTTTTGCCGATGGAGCCTGGCATCTGGGGACTCGCGACCCCGTTACGTTGCGTATTGCCGAAGTGATTAATCTGGTGACAGCGAAAAATATTACGGCTGATTTGCa                                                                    <  1:1264086/140‑1 (MQ=255)

                                                                   cAGGTTAACGGTGTCGATTTTGTCCTGCCTTTCCGTTTTGCCGATGGAGCCTGGCATCTGGGGACTCGCGACCCCGTTACGTTGCGAATTGCCGAAGTGATTAATCTGGTGACAGCGAAAAATATTACGGCTGATTTGCa                                                                    <  2:212720/140‑1 (MQ=255)

                                                                     ggTTAACGGTGTCGATTTTGTCCTGCCTTTCCGTTTTGCCGATGGAGCCTGGCATCTGGGGACTCGCGACCCCGTTACGTTGCGAATTGCCGAAGTGATTAATCTGGTGACAGCGAAAAATATTACGGCTGATTTGCAAg                                                                  <  2:2316385/140‑1 (MQ=255)

                                                                     ggTTAACGGTGTCGATTTTGTCCTGCCTTTCCGTTTTGCCGATGGAGCCTGGCATCTGGGGACTCGCGACCCCGTTACGTTGCGAATTGCCGAAGTGATTAATCTGGTGACAGCGAAAAATATTACGGCTGATTTGCAAg                                                                  <  1:16166/140‑1 (MQ=255)

                                                                     ggTTAACGGTGTCGATTTTGTCCTGCCTTTCCGTTTTGCCGATGGAGCCTGGCATCTGGGGACTCGCGACCCCGTTACGTTGCGAATTGCCGAAGTGATTAATCTGGTGACAGCGAAAAATATTACGGCTGATTTGCAAg                                                                  <  1:2176969/140‑1 (MQ=255)

                                                                        ctaCGCTGTCGATGTTGTGCTGCCTTTCCGTTTTGCCGATGGAGCCTGGCATCTGGGGACTCGCGACCCCGTTACGTTGCGAATTGCCGAAGTGATTAATCTGGTGACAGCGAAAAATATTACGGCTGATTTGCAAGGGc                                                               >  2:1779130/3‑140 (MQ=255)

                                                                         aaCGGTGTCGATTTTGTCCTGCCTTTCCGTTTTGCCGATGGAGCCTGGCATCTGGGGACTCGCGACCCCGTTACGTTGCGAATTGCCGAAGTGATTAATCTGGTGACAGCGAAAAATATTACGGCTGATTTGCAAGGGCg                                                              >  2:2365404/1‑140 (MQ=255)

                                                                          aCGGTGTCGATTTTGTCCTGCCTTTCCGTTTTGCCGATGGAGCCTGGCATCTGGGGACTCGCGACCCCGTTACGTTGCGAATTGCCGAAGTGATTAATCTGGTGACAGCGAAAAATATTACGGCTGATTTGCAAGGGCGt                                                             <  1:655572/140‑1 (MQ=255)

                                                                          aCGGTGTCGATTTTGTCCTGCCTTTCCGTTTTGCCGATGGAGCCTGGCATCTGGGGACTCGCGACCCCGTTACGTTGCGAATTGCCGAAGTGATTAATCTGGTGACAGCGAAAAATATTACGGCTGATTTGCAAGGGCGt                                                             <  2:1598616/140‑1 (MQ=255)

                                                                           cGGTGTCGATTTTGTCCTGCCTTTCCGTTTTGCCGATGGAGCCTGGCATCTGGGGACTCGCGACCCCGTTACGTTGCGAATTGCCGAAGTGATTAATCTGGTGACAGCGAAAAATATTACGGCTGATTTGCAAGGGCGtt                                                            >  1:2118770/1‑140 (MQ=255)

                                                                            ggTGTCGATTTTGTCCTGCCTTTCCGTTTTGCCGATGGAGCCTGGCATCTGGGGACTCGCGACCCCGTTACGTTGCGAATTGCCGAAGTGATTAATCTGGTGACAGCGAAAAATATTACGGCTGATTTGCAAGGGCGTTa                                                           >  2:2224551/1‑140 (MQ=255)

                                                                              tgtCGATTTTGTCCTGCCTTTCCGTTTTGCCGATGGAGCCTGGCATCTGGGGACTCGCGACCCCGTTACGTTGCGAATTGCCGAAGTGATTAATCTGGTGACAGCGAAAAATATTACGGCTGATTTGCAAGGGCGTTATc                                                         >  1:1654503/1‑140 (MQ=255)

                                                                                tCGATTTTGTCCTGCCTTTCCGTTTTGCCGATGGAGCCTGGCATCTGGGGACTCGCGACCCCGTTACGTTGCGAATTGCCGAAGTGATTAATCTGGTGACAGCGAAAAATATTACGGCTGATTTGCAAGGGCGTTATCCg                                                       >  1:1065319/1‑140 (MQ=255)

                                                                                tCGATTTTGTCCTGCCTTTCCGTTTTGCCGATGGAGCCTGGCATCTGGGGACTCGCGACCCCGTTACGTTGCGAATTGCCGAAGTGATTAATCTGGTGACAGCGAAAAATATTACGGCTGATTTGCAAGGGCGTTATCCg                                                       >  1:882755/1‑140 (MQ=255)

                                                                                tCGATTTTGTCCTGCCTTTCCGTTTTGCCGATGGAGCCTGGCATCTGGGGACTCGCGACCCCGTTACGTTGCGAATTGCCGAAGTGATTAATCTGGTGACAGCGAAAAATATTACGGCTGATTTGCAAGGGCGTTATCCg                                                       >  2:460023/1‑140 (MQ=255)

                                                                                tCGATTTTGTCCTGCCTTTCCGTTTTGCCGATGGAGCCTGGCATCTGGGGACTCGCGACCCCGTTACGTTGCGAATTGCCGAAGTGATTAATCTGGTGACAGCGAAAAATATTACGGCTGATTTGCAAGGGCGTTATCCg                                                       >  1:1186968/1‑140 (MQ=255)

                                                                                tCGATTTTGTCCTGCCTTTCCGTTTTGCCGATGGAGCCTGGCATCTGGGGACTCGCGACCCCGTTACGTTGCGAATTGCCGAAGTGATTAATCTGGTGACAGCGAAAAATATTACGGCTGATTTGCAAGGGCGTTATCCg                                                       >  1:1296754/1‑140 (MQ=255)

                                                                                tCGATTTTGTCCTGCCTTTCCGTTTTGCCGATGGAGCCTGGCATCTGGGGACTCGCGACCCCGTTACGTTGCGAATTGCCGAAGTGATTAATCTGGTGACAGCGAAAAATATTACGGCTGATTTGCAAGGGCGTTATCCg                                                       >  2:79702/1‑140 (MQ=255)

                                                                                tCGATTTTGTCCTGCCTTTCCGTTTTGCCGATGGAGCCTGGCATCTGGGGACTCGCGACCCCGTTACGTTGCGAATTGCCGAAGTGATTAATCTGGTGACAGCGAAAAATATTACGGCTGATTTGCAAGGGCGTTATCCg                                                       >  1:2064354/1‑140 (MQ=255)

                                                                                   aTTTTGTCCTGCCTTTCCGTTTTGCCGATGGAGCCTGGCATCTGGGGACTCGCGACCCCGTTACGTTGCGAATTGCCGAAGTGATTAATCTGGTGACAGCGAAAAATATTACGGCTGATTTGCAAGGGCGt                                                             <  1:616786/131‑1 (MQ=255)

                                                                                   aTTTTGTCCTGCCTTTCCGTTTTGCCGATGGAGCCTGGCATCTGGGGACTCGCGACCCCGTTACGTTGCGAATTGCCGAAGTGATTAATCTGGTGACAGCGAAAAATATTACGGCTGATTTGCAAGGGCGt                                                             >  2:616786/1‑131 (MQ=255)

                                                                                    ttttGTCCTGCCTTTCCGTTTTGCCGATGGAGCCTGGCATCTGGGGACTCGCGACCCCGTTACGTTGCGAATTGCCGAAGTGATTAATCTGGTGACAGCGAAAAATATTACGGCTGATTTGCAAGGGCGTTATCCGTGGa                                                   >  1:529055/1‑140 (MQ=255)

                                                                                     tttGTCCTGCCTTTCCGTTTTGCCGATGGAGCCTGGCATCTGGGGACTCGCGACCCCGTTACGTTGCGAATTGCCGAAGTGATTAATCTGGTGACAGCGAAAAATATTACGGCTGATTTGCAAGGGCGTTATCCGTGGAc                                                  <  2:623129/140‑1 (MQ=255)

                                                                                     tttGTCCTGCCTTTCCGTTTTGCCGATGGAGCCTGGCATCTGGGGACTCGCGACCCCGTTACGTTGCGAATTGCCGAAGTGATTAATCTGGTGACAGCGAAAAATATTACGGCTGATTTGCAAGGGCGTTATCCGTGGAc                                                  <  2:800533/140‑1 (MQ=255)

                                                                                      ttGTCCTGCCTTTCCGTTTTGCCGATGGAGCCTGGCATCTGGGGACTCGCGACCCCGTTACGTTGCGAATTGCCGAAGTGATTAATCTGGTGACAGCGAAAAATATTACGGCTGATTTGCAAGGGCGTTATCCGTGGACt                                                 <  2:514690/140‑1 (MQ=255)

                                                                                       tGTCCTGCCTTTCCGTTTTGCCGATGGAGCCTGGCATCTGGGGACTCGCGACCCCGTTACGTTGCGAATTGCCGAAGTGATTAATCTGGTGACAGCGAAAAATATTACGGCTGATTTGCAAGGGCGTTATCCGTGGACTg                                                <  1:2224551/140‑1 (MQ=255)

                                                                                        gTCCTGCCTTTCCGTTTTGCCGATGGAGCCTGGCATCTGGGGACTCGCGACCCCGTTACGTTGCGAATTGCCGAAGTGATTAATCTGGTGACAGCGAAAAATATTACGGCTGATTTGCAAGGGCGTTATCCGTGGACTga                                               >  2:2196820/1‑140 (MQ=255)

                                                                                        gTCCTGCCTTTCCGTTTTGCCGATGGAGCCTGGCATCTGGGGACTCGCGACCCCGTTACGTTGCGAATTGCCGAAGTGATTAATCTGGTGACAGCGAAAAATATTACGGCTGATTTGCAAGGGCGTTATCCGTGGACTga                                               >  2:1867446/1‑140 (MQ=255)

                                                                                        gTCCTGCCTTTCCGTTTTGCCGATGGAGCCTGGCATCTGGGGACTCGCGACCCCGTTACGTTGCGAATTGCCGAAGTGATTAATCTGGTGACAGCGAAAAATATTACGGCTGATTTGCAAGGGCGTTATCCGTGGACTga                                               >  1:254129/1‑140 (MQ=255)

                                                                                             gCCTTTCCGTTTTGCCGATGGAGCCTGGCATCTGGGGACTCGCGACCCCGTTACGTTGCGAATTGCCGAAGTGATTAATCTGGTGACAGCGAAAAATATTACGGCTGATTTGCAAGGGCGTTATCCGTGGACTgaagaag                                          <  2:1296754/140‑1 (MQ=255)

                                                                                              ccTTTCCGTTTTGCCGATGGAGCCTGGCATCTGGGGACTCGCGACCCCGTTACGTTGCGAATTGCCGAAGTGATTAATCTGGTGACAGCGAAAAATATTACGGCTGATTTGCAAGGGCGTTATCCGTg                                                     >  2:952164/1‑128 (MQ=255)

                                                                                              ccTTTCCGTTTTGCCGATGGAGCCTGGCATCTGGGGACTCGCGACCCCGTTACGTTGCGAATTGCCGAAGTGATTAATCTGGTGACAGCGAAAAATATTACGGCTGATTTGCAAGGGCGTTATCCGTg                                                     <  1:952164/128‑1 (MQ=255)

                                                                                                  tCCGTTTTGCCGATGGAGCCTGGCATCTGGGGACTCGCGACCCCGTTACGTTGCGAATTGCCGAAGTGATTAATCTGGTGACAGCGAAAAATATTACGGCTGATTTGCAAGGGCGTTATCCGTGGACTGAAGAAGAAccc                                     <  2:1450685/140‑1 (MQ=255)

                                                                                                  tCCGTTTTGCCGATGGAGCCTGGCATCTGGGGACTCGCGACCCCGTTACGTTGCGAATTGCCGAAGTGATTAATCTGGTGACAGCGAAAAATATTACGGCTGATTTGCAAGGGCGTTATCCGTGGACTGAAGAAGAAccc                                     <  2:238432/140‑1 (MQ=255)

                                                                                                       tttGCCGATGGAGCCTGGCATCTGGGGACTCGCGACCCCGTTACGTTGCGAATTGCCGAAGTGATTAATCTGGTGACAGCGAAAAATATTACGGCTGATTTGCAAGGGCGTTATCCGTGGACTGAAGAAGAACCCTTGCt                                <  1:810413/140‑1 (MQ=255)

                                                                                                       tttGCCGATGGAGCCTGGCATCTGGGGACTCGCGACCCCGTTACGTTGCGAATTGCCGAAGTGATTAATCTGGTGACAGCGAAAAATATTACGGCTGATTTGCAAGGGCGTTATCCGTGGACTGAAGAAGAACCCTTGCt                                <  1:79702/140‑1 (MQ=255)

                                                                                                        ttGCCGATGGAGCCTGGCATCTGGGGACTCGCGACCCCGTTACGTTGCGAATTGCCGAAGTGATTAATCTGGTGACAGCGAAAAATATTACGGCTGATTTGCAAGGGCGTTATCCGTGGACTGAAGAAGAACCCTTGCTg                               >  1:1668065/1‑140 (MQ=255)

                                                                                                        ttGCCGATGGAGCCTGGCATCTGGGGACTCGCGACCCCGTTACGTTGCGAATTGCCGAAGTGATTAATCTGGTGACAGCGAAAAATATTACGGCTGATTTGCAAGGGCGTTATCCGTGGACTGAAGAAGAACCCTTGCTg                               >  2:73883/1‑140 (MQ=255)

                                                                                                        ttGCCGATGGAGCCTGGCATCTGGGGACTCGCGACCCCGTTACGTTGCGAATTGCCGAAGTGATTAATCTGGTGACAGCGAAAAATATTACGGCTGATTTGCAAGGGCGTTATCCGTGGACTGAAGAAGAACCCTTGCTg                               >  1:824606/1‑140 (MQ=255)

                                                                                                         tGCCGATGGAGCCTGGCATCTGGGGACTCGCGACCCCGTTACGTTGCGAATTGCCGAAGTGATTAATCTGGTGACAGCGAAAAATATTACGGCTGATTTGCAAGGGCGTTATCCGTGGACTGAAGAAGAACCCTTGCTGt                              <  2:1668065/140‑1 (MQ=255)

                                                                                                          gCCGATGGAGCCTGGCATCTGGGGACTCGCGACCCCGTTACGTTGCGAATTGCCGAAGTGATTAATCTGGTGACAGCGAAAAATATTACGGCTGATTTGCAAGGGCGTTATCCGTGGACTgaagaaga                                         <  1:1764568/128‑1 (MQ=255)

                                                                                                           ccGATGGAGCCTGGCATCTGGGGACTCGCGACCCCGTTACGTTGCGAATTGCCGAAGTGATTAATCTGGTGACAGCGAAAAATATTACGGCTGATTTGCAAGGGCGTTATCCGTGGACTGAAGAAGAACCCTTGCTGTTg                            <  1:902867/140‑1 (MQ=255)

                                                                                                              aTGGAGCCTGGCATCTGGGGACTCGCGACCCCGTTACGTTGCGAATTGCCGAAGTGATTAATCTGGTGACAGCGAAAAATATTACGGCTGATTTGCAAGGGCGTTATCCGTGGACTGAAGAAGAACCCTTGCTGTTGACt                         <  2:1186968/140‑1 (MQ=255)

                                                                                                              aTGGAGCCTGGCATCTGGGGACTCGCGACCCCGTTACGTTGCGAATTGCCGAAGTGATTAATCTGGTGACAGCGAAAAATATTACGGCTGATTTGCAAGGGCGTTATCCGTGGACTGAAGAAGAACCCTTGCTGTTGACt                         <  2:1016066/140‑1 (MQ=255)

                                                                                                                      tGGCATCTGGGGACTCGCGACCCCGTTACGTTGCGAATTGCCGAAGTGATTAATCTGGTGACAGCGAAAAATATTACGGCTGATTTGCAAGGGCGTTATCCGTGGACTGAAGAAGAACCCTTGCTGTTGACTGATGTTAg                 <  1:2365404/140‑1 (MQ=255)

                                                                                                                         cATCTGGGGACTCGCGACCCCGTTACGTTGCGAATTGCCGAAGTGATTAATCTGGTGACAGCGAAAAATATTACGGCTGATTTGCAAGGGCGTTATCCGTGGACTGAAGAAGAACCCTTGCTGTTGACTGATGTTAGCGt              >  1:76716/1‑140 (MQ=255)

                                                                                                                         cATCTGGGGACTCGCGACCCCGTTACGTTGCGAATTGCCGAAGTGATTAATCTGGTGACAGCGAAAAATATTACGGCTGATTTGCAAGGGCGTTATCCGTGGACTGAAGAAGAACCCTTGCTGTTGACTGATGTTAGCGt              >  1:1380307/1‑140 (MQ=255)

                                                                                                                          aTCTGGGGACTCGCGACCCCGTTACGTTGCGAATTGCCGAAGTGATTAATCTGGTGACAGCGAAAAATATTACGGCTGATTTGCAAGGGCGTTATCCGTGGACTGAAGAAGAACCCTTGCTGTTGACTGATGTTAGCGTc             <  1:670629/140‑1 (MQ=255)

                                                                                                                           tCTGGGGACTCGCGACCCCGTTACGTTGCGAATTGCCGAAGTGATTAATCTGGTGACAGCGAAAAATATTACGGCTGATTTGCAAGGGCGTTATCCGTGGACTGAAGAAGAACCCTTGCTGTTGACTGATGTTAGCGTCg            <  2:2258431/140‑1 (MQ=255)

                                                                                                                           tCTGGGGACTCGCGACCCCGTTACGTTGCGAATTGCCGAAGTGATTAATCTGGTGACAGCGAAAAATATTACGGCTGATTTGCAAGGGCGTTATCCGTGGACTGAAGAAGAACCCTTGCTGTTGACTGATGTTAGCGTCg            <  2:1513286/140‑1 (MQ=255)

                                                                                                                            cTGGGGACTCGCGACCCCGTTACGTTGCGAATTGCCGAAGTGATTAATCTGGTGACAGCGAAAAATATTACGGCTGATTTGCAAGGGCGTTATCCGTGGACTGAAGAAGAACCCTTGCTGTTGACTGATGTTAGCGTCGa           >  2:1380914/1‑140 (MQ=255)

                                                                                                                             tGGGGACTCGCGACCCCGTTACGTTGCGAATTGCCGAAGTGATTAATCTGGTGACAGCGAAAAATATTACGGCTGATTTGCAAGGGCGTTATCCGTGGACTGAAGAAGAACCCTTGCTGTTGACTGATGTTAGTGTCGAt          <  1:1104097/140‑1 (MQ=255)

                                                                                                                             tGGGGACTCGCGACCCCGTTACGTTGCGAATTGCCGAAGTGATTAATCTGGTGACAGCGAAAAATATTACGGCTGATTTGCAAGGGCGTTATCCGTGGACTGAAGAAGAACCCTTGCTGTTGACTGATGTTAGCGTCGAt          <  1:42437/140‑1 (MQ=255)

                                                                                                                                 gACTCGCGACCCCGTTACGTTGCGAATTGCCGAAGTGATTAATCTGGTGACAGCGAAAAATATTACGGCTGATTTGCAAGGGCGTTATCCGTGGACTGAAGAAGAACCCTTGCTGTTGACTGATGTTAGCGTCGATgtgt      <  1:2312565/140‑1 (MQ=255)

                                                                                                                                 gACTCGCGACCCCGTTACGTTGCGAATTGCCGAAGTGATTAATCTGGTGACAGCGAAAAATATTACGGCTGATTTGCAAGGGCGTTATCCGTGGACTGAAGAAGAACCCTTGCTGTTGACTGATGTTAGCGTCGATgtgt      <  1:1779130/140‑1 (MQ=255)

                                                                                                                                  aCTCGCGACCCCGTTACGTTGCGAATTGCCGAAGTGATTAATCTGGTGACAGCGAAAAATATTACGGCTGATTTGCAAGGGCGTTATCCGTGGACTGAAGAAGAACCCTTGCTGTTGACTGATGTTAGCGTCGATGTGtt     <  2:529055/140‑1 (MQ=255)

                                                                                                                                  aCTCGCGACCCCGTTACGTTGCGAATTGCCGAAGTGATTAATCTGGTGACAGCGAAAAATATTACGGCTGATTTGCAAGGGCGTTATCCGTGGACTGAAGAAGAACCCTTGCTGTTGACTGATGTTAGCGTCGATGTGtt     <  2:812763/140‑1 (MQ=255)

                                                                                                                                   cTCGCGACCCCGTTACGTTGCGAATTGCCGAAGTGATTAATCTGGTGACAGCGAAAAATATTACGGCTGATTTGCAAGGGCGTTATCCGTGGACTGAAGAAGAACCCTTGCTGTTGACTGATGTTAGCGTCGATGTGTTa    <  2:882755/140‑1 (MQ=255)

                                                                                                                                    tCGCGACCCCGTTACGTTGCGAATTGCCGAAGTGATTAATCTGGTGACAGCGAAAAATATTACGGCTGATTTGCAAGGGCGTTATCCGTGGACTGAAGAAGAACCCTTGCTGTTGACTGATGTTAGCGTCGAtg         >  2:1298935/1‑134 (MQ=255)

                                                                                                                                    tCGCGACCCCGTTACGTTGCGAATTGCCGAAGTGATTAATCTGGTGACAGCGAAAAATATTACGGCTGATTTGCAAGGGCGTTATCCGTGGACTGAAGAAGAACCCTTGCTGTTGACTGATGTTAGCGTCGAtg         <  1:1298935/134‑1 (MQ=255)

                                                                                                                                    tCGCGACCCAGTTACGTTGCGAATTGCCGAAGTGATTAATCTGGTGACAGCGAAAAATATTACGGCTGATTTGCAAGGGCGTTATCCGTGGACTGAAGAAGAACCCTTGCTGTTGACTGATGTTAGCGTCGATGTGTTAg   >  2:1814080/1‑140 (MQ=255)

                                                                                                                                     cgcgACCCCGTTACGTTGCGAATTGCCGAAGTGATTAATCTGGTGACAGCGAAAAATATTACGGCTGATTTGCAAGGGCGTTATCCGTGGACTGAAGAAGAACCCTTGCTGTTGACTGATGTTAGCGTCGATGTGTTAgg  >  1:355574/1‑140 (MQ=255)

                                                                                                                                     cgcgACCCCGTTACGTTGCGAATTGCCGAAGTGATTAATCTGGTGACAGCGAAAAATATTACGGCTGATTTGCAAGGGCGTTATCCGTGGACTGAAGAAGAACCCTTGCTGTTGACTGATGTTAGCGTCGATGTGTTAgg  <  1:460023/140‑1 (MQ=255)

                                                                                                                                     cgcgACCCCGTTACGTTGCGAATTGCCGAAGTGATTAATCTGGTGACAGCGAAAAATATTACGGCTGATTTGCAAGGGCGTTATCCGTGGACTGAAGAAGAACCCTTGCTGTTGACTGATGTTAGCGTCGATGTGTTAgg  <  2:824606/140‑1 (MQ=255)

TGAACAAGGATTCCGCGCGGGAGGACACGGCGTGTTGAAAGGCGGTAGTGCCTGGATGCCAGATAATCAGGTTAACGGTGTCGATTTTGTCCTGCCTTTCCGTTTTGCCGATGGAGCCTGGCATCTGGGGACTCGCGGCCCCGTTACGTTGCGAATTGCCGAAGTGATTAATCTGGTGACAGCGAAAAATATTACGGCTGATTTGCAAGGGCGTTATCCGTGGACTGAAGAAGAACCCTTGCTGTTGACTGATGTTAGCGTCGATGTGTTAGG  >  NC_000913/1444868‑1445140

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

N/A