Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A7 F28 I1 R1
|
183 |
98.6 |
3427438 |
96.9% |
3321187 |
138.7 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,580,480 |
G→A |
A104V (GCC→GTC) |
ydeM ← |
putative anaerobic sulfatase maturation enzyme YdeM |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,580,480 | 0 | G | A | 99.0%
| 342.9
/ ‑5.4
| 98 | A104V (GCC→GTC) | ydeM | putative anaerobic sulfatase maturation enzyme YdeM |
| Reads supporting (aligned to +/- strand): ref base G (1/0); new base A (49/48); total (50/48) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.98e-01 |
ATGATTTCAGACGCTCGATGGCTGCTATCACTTTTGCAAAAGTACCGTTACCTGAATTACTGCGTCTGTAACGGTCATGTAACTCCTGGGGGCCATCGATCGAGATACCAACCAGAAATTCATGTTCTTTGAGAAAGGCACACCATTCATTATTCAATAAAATGCCATTCGTTTGTAATGCATTAAAAATACGTTTTTGGCCTGCATAGCGTTGTTGATAGTGAATAACTTTACGGAAAAAATCCAGGCCAGCCAGAGTGGGTTCACCGCCTTG > NC_000913/1580343‑1580616
|
atGATTTCAGACGCTCGATGGCTGCTATCACTTTTGCAAAAGTACCGTTACCTGAATTACTGCGTCTGTAACGGTCATGTAACTCCTGGGGGCCATCGATCGAGATACCAACCAGAAATTCATGTTCTTTGAGAAAGAca < 1:716881/140‑1 (MQ=255)
gATTTCAGACGCTCGATGGCTGCTATCACTTTTGCAAAAGTACCGTTACCTGAATTACTGCGTCTGTAACGGTCATGTAACTCCTGGGGGCCATCGATCGAGATACCAACCAGAAATTCATGTTCTTTGAGAAAGAcaca < 1:702141/140‑1 (MQ=255)
gATTTCAGACGCTCGATGGCTGCTATCACTTTTGCAAAAGTACCGTTACCTGAATTACTGCGTCTGTAACGGTCATGTAACTCCTGGGGGCCATCGATCGAGATACCAACCAGAAATTCATGTTCTTTGAGAAAGAcaca < 2:912984/140‑1 (MQ=255)
gATTTCAGACGCTCGATGGCTGCTATCACTTTTGCAAAAGTACCGTTACCTGAATTACTGCGTCTGTAACGGTCATGTAACTCCTGGGGGCCATCGATCGAGATACCAACCAGAAATTCATGTTCTTTGAGAAAGAcaca < 1:544039/140‑1 (MQ=255)
gATTTCAGACGCTCGATGGCTGCTATCACTTTTGCAAAAGTACCGTTACCTGAATTACTGCGTCTGTAACGGTCATGTAACTCCTGGGGGCCATCGATCGAGATACCAACCAGAAATTCATGTTCTTTGAGAAAGAcaca > 2:544039/1‑140 (MQ=255)
gATTTCAGACGCTCGATGGCTGCTATCACTTTTGCAAAAGTACCGTTACCTGAATTACTGCGTCTGTAACGGTCATGTAACTCCTGGGGGCCATCGATCGAGATACCAACCAGAAATTCATGTTCTTTGAGAAAGAcaca < 1:150967/140‑1 (MQ=255)
gATTTCAGACGCTCGATGGCTGCTATCACTTTTGCAAAAGTACCGTTACCTGAATTACTGCGTCTGTAACGGTCATGTAACTCCTGGGGGCCATCGATCGAGATACCAACCAGAAATTCATGTTCTTTGAGAAAGAcaca < 2:1497579/140‑1 (MQ=255)
gATTTCAGACGCTCGATGGCTGCTATCACTTTTGCAAAAGTACCGTTACCTGAATTACTGCGTCTGTAACGGTCATGTAACTCCTGGGGGCCATCGATCGAGATACCAACCAGAAATTCATGTTCTTTGAGAAAGAcaca > 2:343834/1‑140 (MQ=255)
tttCAGACGCTCGATGGCTGCTATCACTTTTGCAAAAGTACCGTTACCTGAATTACTGCGTCTGTAACGGTCATGTAACTCCTGGGGGCCATCGATCGAGATACCAACCAGAAATTCATGTTCTTTGAGAAAGACACAcc < 1:763683/140‑1 (MQ=255)
tttCAGACGCTCGATGGCTGCTATCACTTTTGCAAAAGTACCGTTACCTGAATTACTGCGTCTGTAACGGTCATGTAACTCCTGGGGGCCATCGATCGAGATACCAACCAGAAATTCATGTTCTTTGAGAAAGACACAcc > 1:232738/1‑140 (MQ=255)
cAGACGCTCGATGGCTGCTATCACTTTTGCAAAAGTACCGTTACCTGAATTACTGCGTCTGTAACGGTCATGTAACTCCTGGGGGCCATCGATCGAGATACCAACCAGAAATTCATGTTCTTTGAGAAAGACACACcatt > 2:550602/1‑140 (MQ=255)
gACGCTCGATGGCTGCTATCACTTTTGCAAAAGTACCGTTACCTGAATTACTGCGTCTGTAACGGTCATGTAACTCCTGGGGGCCATCGATCGAGATACCAACCAGAAATTCATGTTCTTTGAGAAAGACACACcattca < 1:1068485/140‑1 (MQ=255)
gACGCTCGATGGCTGCTATCACTTTTGCAAAAGTACCGTTACCTGAATTACTGCGTCTGTAACGGTCATGTAACTCCTGGGGGCCATCGATCGAGATACCAACCAGAAATTCATGTTCTTTGAGAAAGACACACcattca < 2:587124/140‑1 (MQ=255)
cGCTCGATGGCTGCTATCACTTTTGCAAAAGTACCGTTACCTGAATTACTGCGTCTGTAACGGTCATGTAACTCCTGGGGGCCATCGATCGAGATACCAACCAGAAATTCATGTTCTTTGAGAAAGACACACcattcatt > 1:1040597/1‑140 (MQ=255)
cTCGATGGCTGCTATCACTTTTGCAAAAGTACCGTTACCTGAATTACTGCGTCTGTAACGGTCATGTAACTCCTGGGGGCCATCGATCGAGATACCAACCAGAAATTCATGTTCTTTGAGAAAGAca > 2:1636289/1‑127 (MQ=255)
cTCGATGGCTGCTATCACTTTTGCAAAAGTACCGTTACCTGAATTACTGCGTCTGTAACGGTCATGTAACTCCTGGGGGCCATCGATCGAGATACCAACCAGAAATTCATGTTCTTTGAGAAAGACACACCATTCattat > 1:994696/1‑140 (MQ=255)
cTCGATGGCTGCTATCACTTTTGCAAAAGTACCGTTACCTGAATTACTGCGTCTGTAACGGTCATGTAACTCCTGGGGGCCATCGATCGAGATACCAACCAGAAATTCATGTTCTTTGAGAAAGACACACCATTCattat > 2:841258/1‑140 (MQ=255)
cTCGATGGCTGCTATCACTTTTGCAAAAGTACCGTTACCTGAATTACTGCGTCTGTAACGGTCATGTAACTCCTGGGGGCCATCGATCGAGATACCAACCAGAAATTCATGTTCTTTGAGAAAGACACACCATTCattat > 2:419838/1‑140 (MQ=255)
cGATGGCTGCTATCACTTTTGCAAAAGTACCGTTACCTGAATTACTGCGTCTGTAACGGTCATGTAACTCCTGGGGGCCATCGATCGAGATACCAACCAGAAATTCATGTTCTTTGAGAAAGACACACCATTCATTATTc > 2:331329/1‑140 (MQ=255)
ctATCACTTTTGCAAAAGTACCGTTACCTGAATTACTGCGTCTGTAACGGTCATGTAACTCCTGGGGGCCATCGATCGAGATACCAACCAGAAATTCATGTTCTTTGAGAAAGACACACCATTCATTATTCAATAAAATg > 2:1029383/1‑140 (MQ=255)
ctATCACTTTTGCAAAAGTACCGTTACCTGAATTACTGCGTCTGTAACGGTCATGTAACTCCTGGGGGCCATCGATCGAGATACCAACCAGAAATTCATGTTCTTTGAGAAAGACACACCATTCATTATTCAATAAAATg > 2:1319261/1‑140 (MQ=255)
ctATCACTTTTGCAAAAGTACCGTTACCTGAATTACTGCGTCTGTAACGGTCATGTAACTCCTGGGGGCCATCGATCGAGATACCAACCAGAAATTCATGTTCTTTGAGAAAGACACACCATTCATTATTCAATAAAATg < 2:406578/140‑1 (MQ=255)
tCACTTTTGCAAAAGTACCGTTACCTGAATTACTGCGTCTGTAACGGTCATGTAACTCCTGGGGGCCATCGATCGAGATACCAACCAGAAATTCATGTTCTTTGAGAAAGACACACCATTCATTATTCAATAAAATGCCa < 1:1637807/140‑1 (MQ=255)
tCACTTTTGCAAAAGTACCGTTACCTGAATTACTGCGTCTGTAACGGTCATGTAACTCCTGGGGGCCATCGATCGAGATACCAACCAGAAATTCATGTTCTTTGAGAAAGACACACCATTCATTATTCAATAAAATGCCa < 2:994696/140‑1 (MQ=255)
tCACTTTTGCAAAAGTACCGTTACCTGAATTACTGCGTCTGTAACGGTCATGTAACTCCTGGGGGCCATCGATCGAGATACCAACCAGAAATTCATGTTCTTTGAGAAAGACACACCATTCATTATTCAATAAAATGCCa < 1:1108349/140‑1 (MQ=255)
tCACTTTTGCAAAAGTACCGTTACCTGAATTACTGCGTCTGTAACGGTCATGTAACTCCTGGGGGCCATCGATCGAGATACCAACCAGAAATTCATGTTCTTTGAGAAAGACACACCATTCATTATTCAATAAAATGCCa < 1:419838/140‑1 (MQ=255)
cACTTTTGCAAAAGTACCGTTACCTGAATTACTGCGTCTGTAACGGTCATGTAACTCCTGGGGGCCATCGATCGAGATACCAACCAGAAATTCATGTTCTTTGAGAAAGACACACCATTCATTATTCAATAAAATGCCAt < 2:12690/140‑1 (MQ=255)
aCTTTTGCAAAAGTACCGTTACCTGAATTACTGCGTCTGTAACGGTCATGTAACTCCTGGGGGCCATCGATCGAGATACCAACCAGAAATTCATGTTCTTTGAGAAAGACACACCATTCATTATTCAATAAAATGCCAtt < 1:573268/140‑1 (MQ=255)
tGCAAAAGTACCGTTACCTGAATTACTGCGTCTGTAACGGTCATGTAACTCCTGGGGGCCATCGATCGAGATACCAACCAGAAATTCATGTTCTTTGAGAAAGACACACCATTCATTATTCAATAAAATGCCa < 2:1444721/133‑1 (MQ=255)
tGCAAAAGTACCGTTACCTGAATTACTGCGTCTGTAACGGTCATGTAACTCCTGGGGGCCATCGATCGAGATACCAACCAGAAATTCATGTTCTTTGAGAAAGACACACCATTCATTATTCAATAAAATGCCa > 1:1444721/1‑133 (MQ=255)
aaaaGTACCGTTACCTGAATTACTGCGTCTGTAACGGTCATGTAACTCCTGGGGGCCATCGATCGAGATACCAACCAGAAATTCATGTTCTTTGAGAAAGACACACCATTCATTATTCAATAAAATGCCATTCGTTTGTa < 2:1148635/140‑1 (MQ=255)
tACCGTTACCTGAATTACTGCGTCTGTAACGGTCATGTAACTCCTGGGGGCCATCGATCGAGATACCAACCAGAAATTCATGTTCTTTGAGAAAGACACACCATTCATTATTCAATAAAATGCCATTCGTTTGTAATGCa < 2:369162/140‑1 (MQ=255)
tACCGTTACCTGAATTACTGCGTCTGTAACGGTCATGTAACTCCTGGGGGCCATCGATCGAGATACCAACCAGAAATTCATGTTCTTTGAGAAAGACACACCATTCATTATTCAATAAAATGCCATTCGTTTGTAATGCa < 1:931993/140‑1 (MQ=255)
ccGTTACCTGAATTACTGCGTCTGTAACGGTCATGTAACTCCTGGGGGCCATCGATCGAGATACCAACCAGAAATTCATGTTCTTTGAGAAAGACACACCATTCATTATTCAATAAAATGCCATTCGTTTGTaa < 1:102759/134‑1 (MQ=255)
ccGTTACCTGAATTACTGCGTCTGTAACGGTCATGTAACTCCTGGGGGCCATCGATCGAGATACCAACCAGAAATTCATGTTCTTTGAGAAAGACACACCATTCATTATTCAATAAAATGCCATTCGTTTGTaa > 2:102759/1‑134 (MQ=255)
cGTTACCTGAATTACTGCGTCTGTAACGGTCATGTAACTCCTGGGGGCCATCGATCGAGATACCAACCAGAAATTCATGTTCTTTGAGAAAGACACACCATTCATTATTCAATAAAATGCCATTCGTTTGTAATGCATTa > 1:32291/1‑140 (MQ=255)
aCCTGAATTACTGCGTCTGTAACGGTCATGTAACTCCTGGGGGCCATCGATCGAGATACCAACCAGAAATTCATGTTCTTTGAGAAAGACACACCATTCATTATTCAATAAAATGCCATTCGTTTGTAATGCATTaaaaa > 1:376500/1‑140 (MQ=255)
ccTGAATTACTGCGTCTGTAACGGTCATGTAACTCCTGGGGGCCATCGATCGAGATACCAACCAGAAATTCATGTTCTTTGAGAAAGACACACCATTCATTATTCAATAAAATGCCATTCGTTTGTAATGCATTAAAAAt > 2:13606/1‑140 (MQ=255)
cTGAATTACTGCGTCTGTAACGGTCATGTAACTCCTGGGGGCCATCGATCGAGATACCAACCAGAAATTCATGTTCTTTGAGAAAGACACACCATTCATTATTCAATAAAATGCCATTCGTTTGTAATGCATTAAAAATa < 2:1040597/140‑1 (MQ=255)
cTGAATTACTGCGTCTGTAACGGTCATGTAACTCCTGGGGGCCATCGATCGAGATACCAACCAGAAATTCATGTTCTTTGAGAAAGACACACCATTCATTATTCAATAAAATGCCATTCGTTTGTAATGCATTAAAAATa > 1:1508123/1‑140 (MQ=255)
tGAATTACTGCGTCTGTAACGGTCATGTAACTCCTGGGGGCCATCGATCGAGATACCAACCAGAAATTCATGTTCTTTGAGAAAGACACACCATTCATTATTCAATAAAATGCCATTCGTTTGTAATGCATTAAAAATAc > 1:1359850/1‑140 (MQ=255)
ttACTGCGTCTGTAACGGTCATGTAACTCCTGGGGGCCATCGATCGAGATACCAACCAGAAATTCATGTTCTTTGAGAAAGACACACCATTCATTATTCAATAAAATGCCATTCGTTTGTAATGCATTAAAAATACGttt < 2:310320/140‑1 (MQ=255)
cTGCGTCTGTAACGGTCATGTAACTCCTGGGGGCCATCGATCGAGATACCAACCAGAAATTCATGTTCTTTGAGAAAGACACACCATTCATTATTCAATAAAATGCCATTCGTTTGTAATGCATTAAAAATACGTTTTTg > 1:1255516/1‑140 (MQ=255)
gCGTCTGTAACGGTCATGTAACTCCTGGGGGCCATCGATCGAGATACCAACCAGAAATTCATGTTCTTTGAGAAAGACACACCATTCATTATTCAATAAAATGCCATTCGTTTGTAATGCATTAAAAATACGTTTTTGGc < 2:1255516/140‑1 (MQ=255)
cGTCTGTAACGGTCATGTAACTCCTGGGGGCCATCGATCGAGATACCAACCAGAAATTCATGTTCTTTGAGAAAGACACACCATTCATTATTCAATAAAATGCCATTCGTTTGTAATGCATTAAAAATACGTTTTTGGcc > 2:997290/1‑140 (MQ=255)
tCTGTAACGGTCATGTAACTCCTGGGGGCCATCGATCGAGATACCAACCAGAAATTCATGTTCTTTGAGAAAGACACACCATTCATTATTCAATAAAATGCCATTCGTTTGTAATGCATTAAAAATACGTTTTTGGCCTg > 1:1081738/1‑140 (MQ=255)
cTGTAACGGTCATGTAACTCCTGGGGGCCATCGATCGAGATACCAACCAGAAATTCATGTTCTTTGAGAAAGACACACCATTCATTATTCAATAAAATGCCATTCGTTTGTAATGCATT‑AAAATACGTTTTTGGCCTGCa < 1:1081085/140‑1 (MQ=255)
tGTAACGGTCATGTAACTCCTGGGGGCCATCGATCGAGATACCAACCAGAAATTCATGTTCTTTGAGAAAGACACACCATTCATTATTCAATAAAATGCCATTCGTTTGTAATGCATTAAAAATACGTTTTTGGCCTGCa < 1:841258/140‑1 (MQ=255)
tGTAACGGTCATGTAACTCCTGGGGGCCATCGATCGAGATACCAACCAGAAATTCATGTTCTTTGAGAAAGACACACCATTCATTATTCAATAAAATGCCATTCGTTTGTAATGCATTAAAAATACGTTTTTGGCCTGCa < 2:590259/140‑1 (MQ=255)
tGTAACGGTCATGTAACTCCTAGGGGCCATCGATCGAGATACCAACCAGAAATTCATGTTCTCTGAGAAAGACACACCATTCATTATTCAATAAAATGCCATTCGATTGTAAAGCATTAAAAATATGTTTTTGCCCTGCa > 2:1099432/1‑140 (MQ=255)
gTAACGGTCATGTAACTCCTGGGGGCCATCGATCGAGATACCAACCAGAAATTCATGTTCTTTGAGAAAGACACACCATTCATTATTCAATAAAATGCCATTCGTTTGTAATGCATTAAAAATACGTTTTTGGCCTGCAt < 2:281138/140‑1 (MQ=255)
tAACGGTCATGTAACTCCTGGGGGCCATCGATCGAGATACCAACCAGAAATTCATGTTCTTTGAGAAAGACACACCATTCATTATTCAATAAAATGCCATTCGTTTGTAATGCATTAAAAATACGTTTTTGGCCTGCATa < 2:232738/140‑1 (MQ=255)
aCGGTCATGTAACTCCTGGGGGCCATCGATCGAGATACCAACCAGAAATTCATGTTCTTTGAGAAAGACACACCATTCATTATTCAATAAAATGCCATTCGTTTGTAATGCATTAAAAATACGTTTTTGGCCTGCATAGc < 2:1361222/140‑1 (MQ=255)
gTCATGTAACTCCTGGGGGCCATCGATCGAGATACCAACCAGAAATTCATGTTCTTTGAGAAAGACACACCATTCATTATTCAATAAAATGCCATTCGTTTGTAATGCATTAAAAATACGTTTTTGGCCTGCATAGCgtt > 2:650963/1‑140 (MQ=255)
tCATGTAACTCCTGGGGGCCATCGATCGAGATACCAACCAGAAATTCATGTTCTTTGAGAAAGACACACCATTCATTATTCAATAAAATGCCATTCGTTTGTAATGCATTAAAAATACGTTTTTGGc < 1:562191/127‑1 (MQ=255)
tCATGTAACTCCTGGGGGCCATCGATCGAGATACCAACCAGAAATTCATGTTCTTTGAGAAAGACACACCATTCATTATTCAATAAAATGCCATTCGTTTGTAATGCATTAAAAATACGTTTTTGGc > 2:562191/1‑127 (MQ=255)
cATGTAACTCCTGGGGGCCATCGATCGAGATACCAACCAGAAATTCATGTTCTTTGAGAAAGACACACCATTCATTATTCAATAAAATGCCATTCGTTTGTAATGCATTAAAAATACGTTTTTGGCCTGCATAGCgttgt < 1:1335234/140‑1 (MQ=255)
aTGTAACTCCTGGGGGCCATCGATCGAGATACCAACCAGAAATTCATGTTCTTTGAGAAAGACACACCATTCATTATTCAATAAAATGCCATTCGTTTGTAATGCATTAAAAATACGTTTTTGGCCTGCATAGCgttgtt > 2:383405/1‑140 (MQ=255)
aTGTAACTCCTGGGGGCCATCGATCGAGATACCAACCAGAAATTCATGTTCTTTGAGAAAGACACACCATTCATTATTCAATAAAATGCCATTCGTTTGTAATGCATTAAAAATACGTTTTTGGCCTGCATAGCgttgtt > 1:1123679/1‑140 (MQ=255)
gTAACTCCTGGGGGCCATCGATCGAGATACCAACCAGAAATTCATGTTCTTTGAGAAAGGCACACCATTCATTATTCAATAAAATGCCATTCGTTTGTAATGCATTAAAAATACGTTTTTGGCCTGCATAGCGTTGTTGa > 2:1647978/1‑140 (MQ=255)
gTAACTCCTGGGGGCCATCGATCGAGATACCAACCAGAAATTCATGTTCTTTGAGAAAGACACACCATTCATTATTCAATAAAATGCCATTCGTTTGTAATGCATTAAAAATACGTTTTTGGCCTGCATAGCGTTGTTGa < 1:331329/140‑1 (MQ=255)
gTAACTCCTGGGGGCCATCGATCGAGATACCAACCAGAAATTCATGTTCTTTGAGAAAGACACACCATTCATTATTCAATAAAATGCCATTCGTTTGTAATGCATTAAAAATACGTTTTTGGCCTGCATAGCGTTGTTGa < 1:592314/140‑1 (MQ=255)
ccTGGGGGCCATCGATCGAGATACCAACCAGAAATTCATGTTCTTTGAGAAAGACACACCATTCATTATTCAATAAAATGCCATTCGTTTGTAATTCATTAAAAATACGTTTTTGGCCTGCATAGCgt < 2:1193187/128‑1 (MQ=255)
ccTGGGGGCCATCGATCGAGATACCAACCAGAAATTCATGTTCTTTGAGAAAGACACACCATTCATTATTCAATAAAATGCCATTCGTTTGTAATTCATTAAAAATACGTTTTTGGCCTGCATAGCgt > 1:1193187/1‑128 (MQ=255)
ccTGGGGGCCATCGATCGAGATACAAACCAGAAATTCATGTTCTTTGAGAAAGACACACCATTCATTATTCAATAAAATGCCATTCGTTTGTAATGCATTAAAAATACGTTTTTGGCCTGCATAGCGTTGTTGATAGTGa > 1:1483681/1‑140 (MQ=255)
cTGGGGGCCATCGATCGAGATACCAACCAGAAATTCATGTTCTTTGAGAAAGACACACCATTCATTATTCAATAAAATGCCATTCGTTTGTAATGCATTAAAAATACGTTTTTGGCCTGCATAGc < 1:1056196/125‑1 (MQ=255)
cTGGGGGCCATCGATCGAGATACCAACCAGAAATTCATGTTCTTTGAGAAAGACACACCATTCATTATTCAATAAAATGCCATTCGTTTGTAATGCATTAAAAATACGTTTTTGGCCTGCATAGc > 2:1056196/1‑125 (MQ=255)
tGGGGGCCATCGATCGAGATACCAACCAGAAATTCATGTTCTTTGAGAAAGACACACCATTCATTATTCAATAAAATGCCATTCGTTTGTAATGCATTAAAAATACGTTTTTGGCCTGCATAGCg > 2:616344/1‑125 (MQ=255)
tGGGGGCCATCGATCGAGATACCAACCAGAAATTCATGTTCTTTGAGAAAGACACACCATTCATTATTCAATAAAATGCCATTCGTTTGTAATGCATTAAAAATACGTTTTTGGCCTGCATAGCg < 1:616344/125‑1 (MQ=255)
ggggCCATCGATCGAGATACCAACCAGAAATTCATGTTCTTTGAGAAAGACACACCATTCATTATTCAATAAAATGCCATTCGTTTGTAATGCATTAAAAATACGTTTTTGGCCTGCATAGCGTTGTTGATAGTGaa > 2:1316541/1‑137 (MQ=255)
ggggCCATCGATCGAGATACCAACCAGAAATTCATGTTCTTTGAGAAAGACACACCATTCATTATTCAATAAAATGCCATTCGTTTGTAATGCATTAAAAATACGTTTTTGGCCTGCATAGCGTTGTTGATAGTGaa < 1:1316541/137‑1 (MQ=255)
ggggCCATCGATCGAGATACCAACCAGAAATTCATGTTCTTTGAGAAAGACACACCATTCATTATTCAATAAAATGCCATTCGTTTGTAATGCATTAAAAATACGTTTTTGGCCTGCATAGCGTTGTTGATAGTGAATaa > 2:364409/1‑140 (MQ=255)
ggggCCATCGATCGAGATACCAACCAGAAATTCATGTTCTTTGAGAAAGACACACCATTCATTATTCAATAAAATGCCATTCGTTTGTAATGCATTAAAAATACGTTTTTGGCCTGCATAGCGTTGTTGATAGTGAATaa > 1:736962/1‑140 (MQ=255)
cATCGATCGAGATACCAACCAGAAATTCATGTTCTTTGAGAAAGACACACCATTCATTATTCAATAAAATGCCATTCGTTTGTAATGCATTAAAAATACGTTTTTGGCCTGCATAGCGTTGTTGATAGTGAATAACTTTa > 2:481971/1‑140 (MQ=255)
tcgatcgaGATACCAACCAGAAATTCATGTTCTTTGAGAAAGACACACCATTCATTATTCAATAAAATGCCATTCGTTTGTAATGCATTAAAAATACGTTTTTGGCCTGCATAGCGTTGTTGATAGTGAATAACTTTACg > 2:651913/1‑140 (MQ=255)
tcgatcgaGATACCAACCAGAAATTCATGTTCTTTGAGAAAGACACACCATTCATTATTCAATAAAATGCCATTCGTTTGTAATGCATTAAAAATACGTTTTTGGCCTGCATAGCGTTGTTGATAGTGAATAACTTTACg > 2:1456227/1‑140 (MQ=255)
gaTACCAACCAGAAATTCATGTTCTTTGAGAAAGACACACCATTCATTATTCAATAAAATGCCACTCGTTTGTAATGCATTAAAAATACGTTTTTGGCCTGCATAGCGTTGTTGATAGTGAATAACTTTACGGAAAAAAt < 2:1359850/140‑1 (MQ=255)
accaaccaGAAATTCATGTTCTTTGAGAAAGACACACCATTCATTATTCAATAAAATGCCATTCGTTTGTAATGCATTAAAAATACGTTTTTGGCCTGCATAGCGTTGTTGATAGTGAATAACTTTACGGAAAAAATCCa > 1:1659203/1‑140 (MQ=255)
caaccaGAAATTCATGTTCTTTGAGAAAGACACACCATTCATTATTCAATAAAATGCCATTCGTTTGTAATGCATTAAAAATACGTTTTTGGCCTGCATAGCGTTGTTGATAGTGAATAACTTTACGGAAAAAATCCAgg < 1:66487/140‑1 (MQ=255)
caaccaGAAATTCATGTTCTTTGAGAAAGACACACCATTCATTATTCAATAAAATGCCATTCGTTTGTAATGCATTAAAAATACGTTTTTGGCCTGCATAGCGTTGTTGATAGTGAATAACTTTACGGAAAAAATCCAgg > 2:66487/1‑140 (MQ=255)
caaccaGAAATTCATGTTCTTTGAGAAAGACACACCATTCATTATTCAATAAAATGCCATTCGTTTGTAATGCATTAAAAATACGTTTTTGGCCTGCATAGCGTTGTTGATAGTGAATAACTTTACGGAAAAAATCCAgg > 1:1266077/1‑140 (MQ=255)
caaccaGAAATTCATGTTCTTTGAGAAAGACACACCATTCATTATTCAATAAAATGCCATTCGTTTGTAATGCATTAAAAATACGTTTTTGGCCTGCATAGCGTTGTTGATAGTGAATAACTTTACGGAAAAAATCCAgg < 1:1427261/140‑1 (MQ=255)
aaccaGAAATTCATGTTCTTTGAGAAAGACACACCATTCATTATTCAATAAAATGCCATTCGTTTGTAATGCATTAAAAATACGTTTTTGGCCTGCATAGCGTTGTTGATAGTGAATAACTTTACGGAAAAAATCCAGgc > 1:493834/1‑140 (MQ=255)
aaccaGAAATTCATGTTCTTTGAGAAAGACACACCATTCATTATTCAATAAAATGCCATTCGTTTGTAATGCATTAAAAATACGTTTTTGGCCTGCATAGCGTTGTTGATAGTGAATAACTTTACGGAAAAAATCCAGgc > 2:1701495/1‑140 (MQ=255)
aaccaGAAATTCATGTTCTTTGAGAAAGAAACACCATTCATTATTCAATAAAATGCCATTCGTTTGTAATGCATTAAAAATACGTTTTTGGCCTGCATAGCGTTGTTGATAGTGAATAACTTTACGGAAAAAATCCAGgc > 1:799441/1‑140 (MQ=255)
accaGAAATTCATGTTCTTTGAGAAAGACACACCATTCATTATTCAATAAAATGCCATTCGTTTGTAATGCATTAAAAATACGTTTTTGGCCTGCATAGCGTTGTTGATAGTGAATAACTTTACGGAAAAAATCCAGgcc > 2:1063757/1‑140 (MQ=255)
caGAAATTCATGTTCTTTGAGAAAGACACACCATTCATTATTCAATAAAATGCCATTCGTTTGTAATGCATTAAAAATACGTTTTTGGCCTGCATAGCGTTGTTGATAGTGAATAACTTTACGGAAAAAATCCAGgccag < 2:1508123/140‑1 (MQ=255)
aGAAATTCATGTTCTTTGAGAAAGACACACCATTCATTATTCAATAAAATGCCATTCGTTTGTAATGCATTAAAAATACGTTTTTGGCCTGCATAGCGTTGTTGATAGTGAATAACTTTACGGAAAAAATCCAGgccagc < 1:1701495/140‑1 (MQ=255)
aGAAATTCATGTTCTTTGAGAAAGACACACCATTCATTATTCAATAAAATGCCATTCGTTTGTAATGCATTAAAAATACGTTTTTGGCCTGCATAGCGTTGTTGATAGTGAATAACTTTACGGAAAAAATCCAGgccagc > 2:1002615/1‑140 (MQ=255)
gAAATTCATGTTCTTTGAGAAAGACACACCATTCATTATTCAATAAAATGCCATTCGTTTGTAATGCATTAAAAATACGTTTTTGGCCTGCATAGCGTTGTTGATAGTGAATAACTTTACGGAAAAAATCCAGgccagcc > 2:945209/1‑140 (MQ=255)
ttCATGTTCTTTGAGAAAGACACACCATTCATTATTCAATAAAATGCCATTCGTTTGTAATGCATTAAAAATACGTTTTTGGCCTGCATAGCGTTGTTGATAGTGAATAACTTTACGGAAAAAATCCAGGCCAGCCagag < 2:493834/140‑1 (MQ=255)
cATGTTCTTTGAGAAAGACACACCATTCATTATTCAATAAAATGCCATTCGTTTGTAATGCATTAAAAATACGTTTTTGGCCTGCATAGCGTTGTTGATAGTGAATAACTTTACGGAAAAAATCCAGGCCAGCCAGAGTg > 2:241319/1‑140 (MQ=255)
aTGTTCTTTGAGAAAGACACACCATTCATTATTCAATAAAATGCCATTCGTTTGTAATGCATTAAAAATACGTTTTTGGCCTGCATAGCGTTGTTGATAGTGAATAACTTTACGGAAAAAATCCAGGCCAGCCAGAGTgg > 2:663644/1‑140 (MQ=255)
tCTTTGAGAAAGACACACCATTCATTATTCAATAAAATGCCATTCGTTTGTAATGCATTAAAAATACGTTTTTGGCCTGCATAGCGTTGTTGATAGTGAATAACTTTACGGAAAAAATCCAGGCCAGCCAGAGTGGGTTc < 1:241319/140‑1 (MQ=255)
cTTTGAGAAAGACACACCATTCATTATTCAATAAAATGCCATTCGTTTGTAATGCATTAAAAATACGTTTTTGGCCTGCATAGCGTTGTTGATAGTGAATAACTTTACGGAAAAAATCCAGGCCAGCCAGAGTGGGTTCa > 2:96397/1‑140 (MQ=255)
tGAGAAAGACACACCATTCATTATTCAATAAAATGCCATTCGTTTGTAATGCATTAAAAATACGTTTTTGGCCTGCATAGCGTTGTTGATAGTGAATAACTTTACGGAAAAAATCCAGGCCAGCCAGAGTGGGTTCACCg > 2:1152033/1‑140 (MQ=255)
tGAGAAAGACACACCATTCATTATTCAATAAAATGCCATTCGTTTGTAATGCATTAAAAATACGTTTTTGGCCTGCATAGCGTTGTTGATAGTGAATAACTTTACGGAAAAAATCCAGGCCAGCCAGAGTGGGTTCACCg > 1:1277962/1‑140 (MQ=255)
aaGACACACCATTCATTATTCAATAAAATGCCATTCGTTTGTAATGCATTAAAAATACGTTTTTGGCCTGCATAGCGTTGTTGATAGTGAATAACTTTACGGAAAAAATCCAGGCCAGCCAGAGTGGGTTCACCGCCTTg < 1:651913/140‑1 (MQ=255)
aaGACACACCATTCATTATTCAATAAAATGCCATTCGTTTGTAATGCATTAAAAATACGTTTTTGGCCTGCATAGCGTTGTTGATAGTGAATAACTTTACGGAAAAAATCCAGGCCAGCCAGAGTGGGTTCACCGCCTTg < 1:710100/140‑1 (MQ=255)
aaGACACACCATTCATTATTCAATAAAATGCCATTCGTTTGTAATGCATTAAAAATACGTTTTTGGCCTGCATAGCGTTGTTGATAGTGAATAACTTTACGGAAAAAATCCAGGCCAGCCAGAGTGGGTTCACCGCCTTg < 1:1063757/140‑1 (MQ=255)
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ATGATTTCAGACGCTCGATGGCTGCTATCACTTTTGCAAAAGTACCGTTACCTGAATTACTGCGTCTGTAACGGTCATGTAACTCCTGGGGGCCATCGATCGAGATACCAACCAGAAATTCATGTTCTTTGAGAAAGGCACACCATTCATTATTCAATAAAATGCCATTCGTTTGTAATGCATTAAAAATACGTTTTTGGCCTGCATAGCGTTGTTGATAGTGAATAACTTTACGGAAAAAATCCAGGCCAGCCAGAGTGGGTTCACCGCCTTG > NC_000913/1580343‑1580616
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
