Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A7 F28 I1 R1
|
183 |
98.6 |
3427438 |
96.9% |
3321187 |
138.7 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,699,689 |
T→C |
V112A (GTA→GCA) |
malX → |
PTS enzyme IIBC component MalX |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,699,689 | 0 | T | C | 98.4%
| 457.6
/ ‑0.9
| 125 | coding (335/1593 nt) | malX | PTS enzyme IIBC component MalX |
| Reads supporting (aligned to +/- strand): ref base T (0/0); major base C (60/63); minor base . (1/1); total (61/64) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.61e-01 |
Only 100 of 126 total aligned reads displayed.
TTGGCTCGTTTGCTTTTAGTTTCCTGCCTGTCATGTTCTGTATCGCCATCCCGCTGGGCCTGGCACGCGAAAATAAAGGCGTAGCGGCATTCGCTGGCTTCATCGGTTATGCGGTAATGAACCTCGCGGTAAACTTCTGGTTGACCAATAAAGGCATTCTGCCAACCACGGATGCCGCGGTTCTGAAAGCCAATAACATCCAGAGCATTCTTGGGATCCAGTCGATCGATACCGGGATCCTCGGTGCGGTGATCGCCGGTATTAT > NC_000913/1699560‑1699824
|
ttGGCTCGTTTGCTTTTAGTTTCCTGCCTGTCATGTTCTGTATCGCCATCCCGCTGGGCCTGGCACGCGAAAATAAAGGCGTAGCGGCATTCGCTGGCTTCATCGGTTATGCGGTAATGAACCTCGCGGCAAACTTCTgg < 1:1111244/140‑1 (MQ=255)
ggCTCGTTTGCTTTTAGTTTCCTGCCTGTCATGTTCTGTATCGCCATCCCGCTGGGCCTGGCACGCGAAAATAAAGGCGTAGCGGCATTCGCTGGCTTCATCGGTTATGCGGTAATGAACCTCGCGGCAAACTTCTGGtt < 2:1660367/140‑1 (MQ=255)
gCTCGTTTGCTTTTAGTTTCCTGCCTGTCATGTTCTGTATCGCCATCCCGCTGGGCCTGGCACGCGAAAATAAAGGCGTAGCGGCATTCGCTGGCTTCATCGGTTATGCGGTAATGAACCTCGCGGCAAACTTCTGGTTg > 1:564840/1‑140 (MQ=255)
gCTCGTTTGCTTTTAGTTTCCTGCCTGTCATGTTCTGTATCGCCATCCCGCTGGGCCTGGCACGCGAAAATAAAGGCGTAGCGGCATTCGCTGGCTTCATCGGTTATGCGGTAATGAACCTCGCGGCAAACTTCTGGTTg < 1:1264865/140‑1 (MQ=255)
gCTCGTTTGCTTTTAGTTTCCTGCCTGTCATGTTCTGTATCGCCATCCCGCTGGGCCTGGCACGCGAAAATAAAGGCGTAGCGGCATTCGCTGGCTTCATCGGTTATGCGGTAATGAACCTCGCGGCAAACTTCTGGTTg > 1:830238/1‑140 (MQ=255)
gCTCGTTTGCTTTTAGTTTCCTGCCTGTCATGTTCTGTATCGCCATCCCGCTGGGCCTGGCACGCGAAAATAAAGGCGTAGCGGCATTCGCTGGCTTCATCGGTTATGCGGTAATGAACCTCGCGGCAAACTTCTGGTTg > 1:30175/1‑140 (MQ=255)
gCTCGTTTGCTTTTAGTTTCCTGCCTGTCATGTTCTGTATCGCCATCCCGCTGGGCCTGGCACGCGAAAATAAAGGCGTAGCGGCATTCGCTGGCTTCATCGGTTATGCGGTAATGAACCTCGCGGCAAACTTCTGGTTg > 2:1292040/1‑140 (MQ=255)
cTCGTTTGCTTTTAGTTTCCTGCCTGTCATGTTCTGTATCGCCATCCCGCTGGGCCTGGCACGCGAAAATAAAGGCGTAGCGGCATTCGCTGGCTTCATCGGTTATGCGGTAATGAACCTCGCGGCAAACTTCTGGTTGa > 2:1600840/1‑140 (MQ=255)
cTCGTTTGCTTTTAGTTTCCTCCCTGTCATGTTCTGTATCACCATCCCGCCGGGCCTGGCACGCGAAAATAAAGGCGTAGCGGCCTTCGCCGGCTTCATCGGGTATGCGGCAATGCACCTCCGGGCAACCCTTTGGTTgc > 2:752529/1‑139 (MQ=255)
tCGTTTGCTTTTAGTTTCCTGCCTGTCATGTTCTGTATCGCCATCCCGCTGGGCCTGGCACGCGAAAATAAAGGCGTAGCGGCATTCGCTGGCTTCATCGGTTATGCGGTAATGAACCTCGCGGCAAACTTCTGGTTGAc > 1:612701/1‑140 (MQ=255)
tttGCTTTTAGTTTCCTGCCTGTCATGTTCTGTATCGCCATCCCGCTGGGCCTGGCACGCGAAAATAAAGGCGTAGCGGCATTCGCTGGCTTCATCGGTTATGCGGTAATGAACCTCGCGGCAAACTTCTGGTTGACCaa > 1:697952/1‑140 (MQ=255)
cTTTTAGTTTCCTGCCTGTCATGTTCTGTATCGCCATCCCGCTGGGCCTGGCACGCGAAAATAAAGGCGTAGCGGCATTCGCTGGCTTCATCGGTTATGCGGTAATGAACCTCGCGGCAAACTTCTGGTTGACCAATaaa > 1:1024263/1‑140 (MQ=255)
tttAGTTTCCTGCCTGTCATGTTCTGTATCGCCATCCCGCTGGGCCTGGCACGCG‑AAATAAAGGCGTAGCGGCATTCGCTGGCTTCATCGGTTATGCGGTAATGAACCTCGCGGCAAACTTCTGGTTGACCAATAAAGGc > 2:589222/1‑140 (MQ=255)
tCCTGCCTGTCATGTTCTGTATCGCCATCCCGCTGGGCCTGGCACGCGAAAATAAAGGCGTAGCGGCATTCGCTGGCTTCATCGGTTATGCGGTAATGAACCTCGCGGCAAACTTCTGGTTGACCAATAAAGGCATTCTg < 1:9690/140‑1 (MQ=255)
cctgcctgTCATGTTCTGTATCGCCATCCCGCTGGGCCTGGCACGCGAAAATAAAGGCGTAGCGGCATTCGCTGGCTTCATCGGTTATGCGGTAATGAACCTCGCGGCAAACTTCTGGTTGACCAATAAAg > 2:478090/1‑131 (MQ=255)
cctgcctgTCATGTTCTGTATCGCCATCCCGCTGGGCCTGGCACGCGAAAATAAAGGCGTAGCGGCATTCGCTGGCTTCATCGGTTATGCGGTAATGAACCTCGCGGCAAACTTCTGGTTGACCAATAAAg < 1:478090/131‑1 (MQ=255)
cctgcctgTCATGTTCTGTATCGCCATCCCGCTGGGCCTGGCACGCGAAAATAAAGGCGTAGCGGCATTCGCTGGCTTCATCGGTTATGCGGTAATGAACCTCGCGGCAAACTTCTGGTTGACCAATAAAGGCATTCTGc < 1:868644/140‑1 (MQ=255)
ctgcctgTCATGTTCTGTATCGCCATCCCGCTGGGCCTGGCACGCGAAAATAAAGGCGTAGCGGCATTCGCTGGCTTCATCGGTTATGCGGTAATGAACCTCGCGGCAAACTTCTGGTTGACCAATaa > 2:699076/1‑128 (MQ=255)
ctgcctgTCATGTTCTGTATCGCCATCCCGCTGGGCCTGGCACGCGAAAATAAAGGCGTAGCGGCATTCGCTGGCTTCATCGGTTATGCGGTAATGAACCTCGCGGCAAACTTCTGGTTGACCAATaa < 1:699076/128‑1 (MQ=255)
ctgcctgTCATGTTCTGTATCGCCATCCCGCTGGGCCTGGCACGCGAAAATAAAGGCGTAGCGGCATTCGCTGGCTTCATCGGTTATGCGGTAATGAACCTCGCGGCAAACTTCTGGTTGACCAATAAAGGCATTCTGcc > 2:1660120/1‑140 (MQ=255)
gcctgTCATGTTCTGTATCGCCATCCCGCTGGGCCTGGCACGCGAAAATAAAGGCGTAGCGGCATTCGCTGGCTTCATCGGTTATGCGGTAATGAACCTCGCGGCAAACTTCTGGTTGACCAATAAAGGCATTCTGCCaa > 1:223562/1‑140 (MQ=255)
aTGTTCTGTATCGCCATCCCGCTGGGCCTGGCACGCGAAAATAAAGGCGTAGCGGCATTCGCTGGCTTCATCGGTTATGCGGTAATGAACCTCGCGGCAAACTTCTGGTTGACCAATAAAGGCATTCTGCCAACCACGGa < 1:1515029/140‑1 (MQ=255)
cTGTATCGCCATCCCGCTGGGCCTGGCACGCGAAAATAAAGGCGTAGCGGCATTCGCTGGCTTCATCGGTTATGCGGTAATGAACCTCGCGGCAAACTTCTGGTTGACCAATAAAGGCATTCTGCCAACCACGGATGCcg < 1:285488/140‑1 (MQ=255)
tGTATCGCCATCCCGCTGGGCCTGGCACGCGAAAATAAAGGCGTAGCGGCATTCGCTGGCTTCATCGGTTATGCGGTAATGAACCTCGCGGCAAACTTCTGGTTGACCAATAAAGGCATTCTGCCAACCACGGATGCcgc > 2:1696948/1‑140 (MQ=255)
tGTATCGCCATCCCGCTGGGCCTGGCACGCGAAAATAAAGGCGTAGCGGCATTCGCTGGCTTCATCGGTTATGCGGTAATGAACCTCGCGGCAAACTTCTGGTTGACCAATAAAGGCATTCTGCCAACCACGGATGCcgc > 1:335174/1‑140 (MQ=255)
tATCGCCATCCCGCTGGGCCTGGCACGCGAAAATAAAGGCGTAGCGGCATTCGCTGGCTTCATCGGTTATGCGGTAATGAACCTCGCGGCAAACTTCTGGTTGACCAATAAAGGCATTCTGCCAACCACGGATGCCGCgg > 1:1336664/1‑140 (MQ=255)
tATCGCCATCCCGCTGGGCCTGGCACGCGAAAATAAAGGCGTAGCGGCATTCGCTGGCTTCATCGGTTATGCGGTAATGAACCTCGCGGCAAACTTCTGGTTGACCAATAAAGGCATTCTGCCAACCACGGATGCCGCgg > 1:1384427/1‑140 (MQ=255)
tATCGCCATCCCGCTGGGCCTGGCACGCGAAAATAAAGGCGTAGCGGCATTCGCTGGCTTCATCGGTTATGCGGTAATGAACCTCGCGGCAAACTTCTGGTTGACCAATAAAGGCATTCTGCCAACCACGGATGCCGCgg > 2:1025523/1‑140 (MQ=255)
tATCGCCATCCCGCTGGGCCTGGCACGCGAAAATAAAGGCGTAGCGGCATTCGCTGGCTTCATCGGTTATGCGGTAATGAACCTCGCGGCAAACTTCTGGTTGACCAATAAAGGCATTCTGCCAACCACGGATGCCGCgg > 1:1690892/1‑140 (MQ=255)
tATCGCCATCCCGCTGGGCCTGGCACGCGAAAATAAAGGCGTAGCGGCATTCGCTGGCTTCATCGGTTATGCGGTAATGAACCTCGCGGCAAACTTCTGGTTGACCAATAAAGGCATTCTGCCAACCACGGATGCCGCgg > 1:562622/1‑140 (MQ=255)
ccATCCCGCTGGGCCTGGCACGCGAAAATAAAGGCGTAGCGGCATTCGCTGGCTTCATCGGTTATGCGGTAATGACCCTCGCGGCAAACTTCTGGTTGACCAATAAAGGCATTCTGCCAACCACGGATGCCGCGGTTCTg < 1:752529/140‑1 (MQ=255)
ccATCCCGCTGGGCCTGGCACGCGAAAATAAAGGCGTAGCGGCATTCGCTGGCTTCATCGGTTATGCGGTAATGAACCTCGCGGCAAACTTCTGGTTGACCAATAAAGGCATTCTGCCAACCACGGATGCCGCGGTTCTg > 2:85876/1‑140 (MQ=255)
ccATCCCGCTGGGCCTGGCACGCGAAAATAAAGGCGTAGCGGCATTCGCTGGCTTCATCGGTTATGCGGTAATGAACCTCGCGGCAAACTTCTGGTTGACCAATAAAGGCATTCTGCCAACCACGGATGCCGCGGTTCTg > 1:1270662/1‑140 (MQ=255)
ccATCCCGCTGGGCCTGGCACGCGAAAATAAAGGCGTAGCGGCATTCGCTGGCTTCATCGGTTATGCGGTAATGAACCTCGCGGCAAACTTCTGGTTGACCAATAAAGGCATTCTGCCAACCACGGATGCCGCGGTTCTg < 1:1600840/140‑1 (MQ=255)
ccATCCCGCTGGGCCTGGCACGCGAAAATAAAGGCGTAGCGGCATTCGCTGGCTTCATCGGTTATGCGGTAATGAACCTCGCGGCAAACTTCTGGTTGACCAATAAAGGCATTCTGCCAACCACGGATGCCGCGGTTCTg < 1:1097973/140‑1 (MQ=255)
cATCCCGCTGGGCCTGGCACGCGAAAATAAAGGCGTAGCGGCATTCGCTGGCTTCATCGGTTATGCGGTAATGAACCTCGCGGCAAACTTCTGGTTGACCAATAAAGGCATTCTGCCAACCACGGATGCCGCGGTTCTGa < 2:30175/140‑1 (MQ=255)
aTCCCGCTGGGCCTGGCACGCGAAAATAAAGGCGTAGCGGCATTCGCTGGCTTCATCGGTTATGCGGTAATGAACCTCGCGGCAAACTTCTGGTTGACCAATAAAGGCATTCTGCCAACCACGGATGCCGCGGTTCTGaa < 1:1292040/140‑1 (MQ=255)
tCCCGCTGGGCCTGGCACGCGAAAATAAAGGCGTAGCGGCATTCGCTGGCTTCATCGGTTATGCGGTAATGAACCTCGCGGCAAACTTCTGGTTGACCAATAAAGGCATTCTGCCAACCACGGATGCcg > 2:1229400/1‑129 (MQ=255)
tCCCGCTGGGCCTGGCACGCGAAAATAAAGGCGTAGCGGCATTCGCTGGCTTCATCGGTTATGCGGTAATGAACCTCGCGGCAAACTTCTGGTTGACCAATAAAGGCATTCTGCCAACCACGGATGCCGCGGTTCTGaaa > 2:548474/1‑140 (MQ=255)
tCCCGCTGGGCCTGGCACGCGAAAATAAAGGCGTAGCGGCATTCGCTGGCTTCATCGGTTATGCGGTAATGAACCTCGCGGCAAACTTCTGGTTGACCAATAAAGGCATTCTGCCAACCACGGATGCCGCGGTTCTGaaa > 2:915029/1‑140 (MQ=255)
tCCCGCTGGGCCTGGCACGCGAAAATAAAGGCGTAGCGGCATTCGCTGGCTTCATCGGTTATGCGGTAATGAACCTCGCGGCAAACTTCTGGTTGACCAATAAAGGCATTCTGCCAACCACGGATGCCGCGGTTCTGaaa > 1:455498/1‑140 (MQ=255)
tCCCGCTGGGCCTGGCACGCGAAAATAAAGGCGTAGCGGCATTCGCTGGCTTCATCGGTTATGCGGTAATGAACCTCGCGGCAAACTTCTGGTTGACCAATAAAGGCATTCTGCCAACCACGGATGCCGCGGTTCTGaaa > 1:427314/1‑140 (MQ=255)
tCCCGCTGGGCCTGGCACGCGAAAATAAAGGCGTAGCGGCATTCGCTGGCTTCATCGGTTATGCGGTAATGAACCTCGCGGCAAACTTCTGGTTGACCAATAAAGGCATTCTGCCAACCACGGATGCCGCGGTTCTGaaa > 1:259684/1‑140 (MQ=255)
tCCCGCTGGGCCTGGCACGCGAAAATAAAGGCGTAGCGGCATTCGCTGGCTTCATCGGTTATGCGGTAATGAACCTCGCGGCAAACTTCTGGTTGACCAATAAAGGCATTCTGCCAACCACGGATGCCGCGGTTCTGa < 1:1133528/138‑1 (MQ=255)
tCCCGCTGGGCCTGGCACGCGAAAATAAAGGCGTAGCGGCATTCGCTGGCTTCATCGGTTATGCGGTAATGAACCTCGCGGCAAACTTCTGGTTGACCAATAAAGGCATTCTGCCAACCACGGATGCCGCGGTTCTGa > 2:1133528/1‑138 (MQ=255)
cccGCTGGGCCTGGCACGCGAAAATAAAGGCGTAGCGGCATTCGCTGGCTTCATCGGTTATGCGGTAATGAACCTCGCGGCAAACTTCTGGTTGACCAATAAAGGCATTCTGCCAACCACGGATGCCGCGGTTCTGAAAg < 1:548474/140‑1 (MQ=255)
ccGCTGGGCCTGGCACGCGAAAATAAAGGCGTAGCGGCATTCGCTGGCTTCATCGGTTATGCGGTAATGAACCTCGCGGCAAACTTCTGGTTGACCAATAAAGGCATTCTGCCAACCACGGATGCCGCGGTTCTGAAAGc < 1:700311/140‑1 (MQ=255)
ccGCTGGGCCTGGCACGCGAAAATAAAGGCGTAGCGGCATTCGCTGGCTTCATCGGTTATGCGGTAATGAACCTCGCGGCAAACTTCTGGTTGACCAATAAAGGCATTCTGCCAACCACGGATGCCGCGGTTCTGAAAGc < 2:335174/140‑1 (MQ=255)
ccGCTGGGCCTGGCACGCGAAAATAAAGGCGTAGCGGCATTCGCTGGCTTCATCGGTTATGCGGTAATGAACCTCGCGGCAAACTTCTGGTTGACCAATAAAGGCATTCTGCCAACCACGGATGCCGCGGTTCTGAAAGc < 2:417891/140‑1 (MQ=255)
ccGCTGGGCCTGGCACGCGAAAATAAAGGCGTAGCGGCATTCGCTGGCTTCATCGGTTATGCGGTAATGAACCTCGCGGCAAACTTCTGGTTGACCAATAAAGGCATTCTGCCAACCACGGATGCCGCGGTTCTGAAAGc < 1:238435/140‑1 (MQ=255)
ccGCTGGGCCTGGCACGCGAAAATAAAGGCGTAGCGGCATTCGCTGGCTTCATCGGTTATGCGGTAATGAACCTCGCGGCAAACTTCTGGTTGACCAATAAAGGCATTCTGCCAACCACGGATGCCGCGGTTCTGAAAGc < 1:17521/140‑1 (MQ=255)
gggCCTGGCACGCGAAAATAAAGGCGTAGCGGCATTCGCTGGCTTCATCGGTTATGCGGTAATGAACCTCGCGGCAAACTTCTGGTTGACCAATAAAGGCATTCTGCCAACCACGGATGCCGCGGTTCTGAAAGCCAATa < 2:914022/140‑1 (MQ=255)
ccTGACACGCGAAAATAAAGGCGTAGCGGCATTCGCTGGCTTCATCGGTTATGCGGTAATGAACCTCGCGGCAAACTTCTGGTTGACCAATAAAGGCATTCTGCCAACCACGGATGCCGCGGTTCTGAAAGCCAATAACa > 2:604098/1‑140 (MQ=255)
tGGCACGCGAAAATAAAGGCGTAGCGGCATTCGCTGGCTTCATCGGTTATGCGGTAATGAACCTCGCGGCAAACTTCTGGTTGACCAATAAAGGCATTCTGCCAACCACGGATGCCGCGGTTCTGAAAGCCAATAACATc < 2:261693/140‑1 (MQ=255)
tGGCACGCGAAAATAAAGGCGTAGCGGCATTCGCTGGCTTCATCGGTTATGCGGTAATGAACCTCGCGGCAAACTTCTGGTTGACCAATAAAGGCATTCTGCCAACCACGGATGCCGCGGTTCTGAAAGCCAATAACATc < 2:697952/140‑1 (MQ=255)
gCACGCGAAAATAAAGGCGTAGCGGCATTCGCTGGCTTCATCGGTTATGCGGTAATGAACCTCGCGGCAAACTTCTGGTTGACCAATAAAGGCATTCTGCCAACCACGGATGCCGCGGTTCTGAAAGCCAATAACATCCa > 1:577714/1‑140 (MQ=255)
aCGCGAAAATAAAGGCGTAGCGGCATTCGCTGGCTTCATCGGTTATGCGGTAATGAACCTCGCGGCAAACTTCTGGTTGACCAATAAAGGCATTCTGCCAACCACGGATGCCGCGGTTCTGAAAGCCAATAACATCCaga < 2:455498/140‑1 (MQ=255)
cgcgAAAATAAAGGCGTAGCGGCATTCGCTGGCTTCATCGGTTATGCGGTAATGAACCTCGCGGCAAACTTCTGGTTGACCAATAAAGGCATTCTGCCAACCACGGATGCCGCGGTTCTGAAAGCCAATAACATCCagag < 2:259684/140‑1 (MQ=255)
gcgAAAATAAAGGCGTAGCGGCATTCGCTGGCTTCATCGGTTATGCGGTAATGAACCTCGCGGCAAACTTCTGGTTGACCAATAAAGGCATTCTGCCAACCACGGATGCCGCGGTTCTGAAAGCCAATAACATCCAGAGc > 1:1578720/1‑140 (MQ=255)
gcgAAAATAAAGGCGTAGCGGCATTCGCTGGCTTCATCGGTTATGCGGTAATGAACCTCGCGGCAAACTTCTGGTTGACCAATAAAGGCATTCTGCCAACCACGGATGCCGCGGTTCTGAAAGCCAATAACATCCAGAGc < 1:703390/140‑1 (MQ=255)
cgAAAATAAAGGCGTAGCGGCATTCGCTGGCTTCATCGGTTATGCGGTAATGAACCTCGCGGCAAACTTCTGGTTGACCAATAAAGGCATTCTGCCAACCACGGATGCCGCGGTTCTGAAAGCCAATAACATCCAGAGCa < 2:1578720/140‑1 (MQ=255)
cgAAAATAAAGGCGTAGCGGCATTCGCTGGCTTCATCGGTTATGCGGTAATGAACCTCGCGGCAAACTTCTGGTTGACCAATAAAGGCATTCTGCCAACCACGGATGCCGCGGTTCTGAAAGCCAATAACATCCAGAGCa > 1:522049/1‑140 (MQ=255)
cgAAAATAAAGGCGTAGCGGCATTCGCTGGCTTCATCGGTTATGCGGTAATGAACCTCGCGGCAAACTTCTGGTTGACCAATAAAGGCATTCTGCCAACCACGGATGCCGCGGTTCTGAAAGCCAATAACATCCAGAGCa < 1:1181081/140‑1 (MQ=255)
cgAAAATAAAGGCGTAGCGGCATTCGCTGGCTTCATCGGTTATGCGGTAATGAACCTCGCGGCAAACTTCTGGTTGACCAATAAAGGCATTCTGCCAACCACGGATGCCGCGGTTCTGAAAGCCAATAACATCCAGAGCa > 2:404140/1‑140 (MQ=255)
cgAAAATAAAGGCGTAGCGGCATTCGCTGGCTTCATCGGTTATGCGGTAATGAACCTCGCGGCAAACTTCTGGTTGACCAATAAAGGCATTCTGCCAACCACGGATGCCGCGGTTCTGAAAGCCAATAACATCCAGAGCa < 2:1384427/140‑1 (MQ=255)
aGGCGTAGCGGCATTCGCTGGCTTCATCGGTTATGCGGTAATGAACCTCGCGGCAAACTTCTGGTTGACCAATAAAGGCATTCTGCCAACCACGGATGCCGCGGTTCTGAAAGCCAATAACATCCAGAGCATTCTTGGGa < 2:576742/140‑1 (MQ=255)
cGTAGCGGCATTCGCTGGCTTCATCGGTTATGCGGTAATGAACCTCGCGGCAAACTTCTGGTTGACCAATAAAGGCATTCTGCCAACCACGGATGCCGCGGTTCTGAAAGCCAATAACATCCAGAGCATTCTTGGGATcc < 2:223562/140‑1 (MQ=255)
gCATTCGCTGGCTTCATCGGTTATGCGGTAATGAACCTCGCGGCAAACTTCTGGTTGACCAATAAAGGCATTCTGCCAACCACGGATGCCGCGGTTCTGAAAGCCAATAACATCCAGAGCATTCTTGGGATCCAGtcgat < 1:1660120/140‑1 (MQ=255)
gCATTCGCTGGCTTCATCGGTTATGCGGTAATGAACCTCGCGGCAAACTTCTGGTTGACCAATAAAGGCATTCTGCCAACCACGGATGCCGCGGTTCTGAAAGCCAATAACATCCAGAGCATTCTTGGGATCCAGtcgat < 1:404140/140‑1 (MQ=255)
gCATTCGCTGGCTTCATCGGTTATGCGGTAATGAACCTCGCGGCAAACTTCTGGTTGACCAATAAAGGCATTCTGCCAACCACGGATGCCGCGGTTCTGAAAGCCAATAACATCCAGAGCATTCTTGGGATCCAGtcgat < 1:85876/140‑1 (MQ=255)
gCATTCGCTGGCTTCATCGGTTATGCGGTAATGAACCTCGCGGCAAACTTCTGGTTGACCAATAAAGGCATTCTGCCAACCACGGATGCCGCGGTTCTGAAAGCCAATAACATCCAGAGCATTCTTGGGATCCAGtcgat < 2:427314/140‑1 (MQ=255)
gCATTCGCTGGCTTCATCGGTTATGCGGTAATGAACCTCGCGGCAAACTTCTGGTTGACCAATAAAGGCATTCTGCCAACCACGGATGCCGCGGTTCTGAAAGCCAATAACATCCAGAGCATTCTTGGGATCCAGtcgat < 1:1635809/140‑1 (MQ=255)
aTTCGCTGGCTTCATCGGTTATGCGGTAATGAACCTCGCGGCAAACTTCTGGTTGACCAATAAAGGCATTCTGCCAACCACGGATGCCGCGGTTCTGAAAGCCAATAACATCCAGAGCATTCTTGGGATCCAGtcgatcg > 1:1392129/1‑140 (MQ=255)
ttCGCTGGCTTCATCGGTTATGCGGTAATGAACCTCGCGGCAAACTTCTGGTTGACCAATAAAGGCATTCTGCCAACCACGGATGCCGCGGTTCTGAAAGCCAATAACATCCAGAGCATTCTTGGGATCCAGtcgatcga > 1:939410/1‑140 (MQ=255)
ttCGCTGGCTTCATCGGTTATGCGGTAATGAACCTCGCGGCAAACTTCTGGTTGACCAATAAAGGCATTCTGCCAACCACGGATGCCGCGGTTCTGAAAGCCAATAACATCCAGAGCATTCTTGGGATCCAGtcgatcga > 1:541527/1‑140 (MQ=255)
ttCGCTGGCTTCATCGGTTATGCGGTAATGAACCTCGCGGCAAACTTCTGGTTGACCAATAAAGGCATTCTGCCAACCACGGATGCCGCGGTTCTGAAAGCCAATAACATCCAGAGCATTCTTGGGATCCAGtcgatcga > 2:1166444/1‑140 (MQ=255)
cTGGCTTCATCGGTTATGCGGTAATGAACCTCGCGGCAAACTTCTGGTTGACCAATAAAGGCATTCTGCCAACCACGGATGCCGCGGTTCTGAAAGCCAATAACATCCAGAGCATTCTTGGGATCCAGTCGATCGATAcc < 2:1353216/140‑1 (MQ=255)
gCTTCATCGGTTATGCGGTAATGAACCTCGCGGCAAACTTCTGGTTGACCAATAAAGGCATTCTGCCAACCACGGATGCCGCGGTTCTGAAAGCCAATAACATCCAGAGCATTCTTGGGATCCAGTCGATCGATACCggg < 2:448565/140‑1 (MQ=255)
ttCATCGGTTATGCGGTAATGAACCTCGCGGCAAACTTCTGGTTGACCAATAAAGGCATTCTGCCAACCACGGATGCCGCGGTTCTGAAAGCCAATAACATCCAGAGCATTCTTGGGATCCAGTCGATCGATACCGGGAt < 1:1545033/140‑1 (MQ=255)
tCATCGGTTATGCGGTAATGAACCTCGCGGCAAACTTCTGGTTGACCAATAAAGGCATTCTGCCAACCACGGATGCCGCGGTTCTGAAAGCCAATAACATCCAGAGCATTCTTGGGATCCAGtcgat > 1:1436910/1‑127 (MQ=255)
cATCGGTTATGCGGTAATGAACCTCGCGGCAAACTTCTGGTTGACCAATAAAGGCATTCTGCCAACCACGGATGCCGCGGTTCTGAAAGCCAATAACATCCAGAGCATTCTTGGGATCCAGTCGATCGATACCGGGATcc < 2:550169/140‑1 (MQ=255)
aTCGGTTATGCGGTAATGAACCTCGCGGCAAACTTCTGGTTGACCAATAAAGGCATTCTGCCAACCACGGATGCCGCGGTTCTGAAAGCCAATAACATCCAGAGCATTCTTGGGATCCAGTCGATCGATACCGGGATCCt < 2:1690892/140‑1 (MQ=255)
aTCGGTTATGCGGTAATGAACCTCGCGGCAAACTTCTGGTTGACCAATAAAGGCATTCTGCCAACCACGGATGCCGCGGTTCTGAAAGCCAATAACATCCAGAGCATTCTTGGGATCCAGTCGATCGATACCGGGATCCt < 2:62519/140‑1 (MQ=255)
cGGTTATGCGGTAATGAACCTCGCGGCAAACTTCTGGTTGACCAATAAAGGCATTCTGCCAACCACGGATGCCGCGGTTCTGAAAGCCAATAACATCCAGAGCATTCTTGGGATCCAGTCGATCGATACCGGGATCCTcg < 2:366841/140‑1 (MQ=255)
ttATGCGGTAATGAACCTCGCGGCAAACTTCTGGTTGACCAATAAAGGCATTCTGCCAACCACGGATGCCGCGGTTCTGAAAGCCAATAACATCCAGAGCATTCTTGGGATCCAGTCGATCGATACCGGGATCCTcggtg < 2:1024263/140‑1 (MQ=255)
ttATGCGGTAATGAACCTCGCGGCAAACTTCTGGTTGACCAATAAAGGCATTCTGCCAACCACGGATGCCGCGGTTCTGAAAGCCAATAACATCCAGAGCATTCTTGGGATCCAGTCGATCGATACCGGGATCCTcggtg < 2:416655/140‑1 (MQ=255)
tGCGGTAATGAACCTCGCGGCAAACTTCTGGTTGACCAATAAAGGCATTCTGCCAACCACGGATGCCGCGGTTCTGAAAGCCAATAACATCCAGAGCATTCTTGGGATCCAGTCGATCGATACCGGGATCCTcggtgcgg > 2:697970/1‑140 (MQ=255)
cGGTAATGAACCTCGCGGCAAACTTCTGGTTGACCAATAAAGGCATTCTGCCAACCACGGATGCCGCGGTTCTGAAAGCCAATAACATCCAGAGCATTCTTGGGATCCAGTCGATCGATACCGGGATCCTcggtgcggtg > 2:1176015/1‑140 (MQ=255)
cGGTAATGAACCTCGCGGCAAACTTCTGGTTGACCAATAAAGGCATTCTGCCAACCACGGATGCCGCGGTTCTGAAAGCCAATAACATCCAGAGCATTCTTGGGATCCAGTCGATCGATACCGGGATCCTcggtgcggtg < 2:186982/140‑1 (MQ=255)
aTGAACCTCGCGGCAAACTTCTGGTTGACCAATAAAGGCATTCTGCCAACCATGGATGCCGCGGTTCTGAAAGCCAATAACATCCAGAGCATTCTTGGGATCCAGTCGATCGATACCGGGATCCTCGGTGCGGTGATCGc > 1:1051317/1‑140 (MQ=255)
aTGAACCTCGCGGCAAACTTCTGGTTGACCAATAAAGGCATTCTGCCAACCACGGATGCCGCGGTTCTGAAAGCCAATAACATCCAGAGCATTCTTGGGATCCAGTCGATCGATACCGGGATCCTCGGTGCGGTGATCGc < 1:1025523/140‑1 (MQ=255)
aTGAACCTCGCGGCAAACTTCTGGTTGACCAATAAAGGCATTCTGCCAACCACGGATGCCGCGGTTCTGAAAGCCAATAACATCCAGAGCATTCTTGGGATCCAGTCGATCGATACCGGGATCCTCGGTGCGGTGATCGc < 2:562622/140‑1 (MQ=255)
aTGAACCTCGCGGCAAACTTCTGGTTGACCAATAAAGGCATTCTGCCAACCACGGATGCCGCGGTTCTGAAAGCCAATAACATCCAGAGCATTCTTGGGATCCAGTCGATCGATACCGGGATCCTCGGTGCGGTGATCGc > 2:1483950/1‑140 (MQ=255)
gAACCTCGCGGCAAACTTCTGGTTGACCAATAAAGGCATTCTGCCAACCACGGATGCCGCGGTTCTGAAAGCCAATAACATCCAGAGCATTCTTGGGATCCAGTCGATCGATACCGGGATCCTCGGTGCGGTGATCGCCg < 2:518056/140‑1 (MQ=255)
aaCCTCGCGGCAAACTTCTGGTTGACCAATAAAGGCATTCTGCCAACCACGGATGCCGCGGTTCTGAAAGCCAATAACATCCAGAGCATTCTTGGGATCCAGTCGATCGATACCGGGATCCTCGGTGCGGTGATCGCCgg > 1:1045574/1‑140 (MQ=255)
cTCGCGGCAAACTTCTGGTTGACCAATAAAGGCATTCTGCCAACCACGGATGCCGCGGTTCTGAAAGCCAATAACATCCAGAGCATTCTTGGGATCCAGTCGATCGATACCGGGATCCTCGGTGCGGTGATCGCCGGtat < 1:589222/140‑1 (MQ=255)
cgcgGCAAACTTCTGGTTGACCAATAAAGGCATTCTGCCAACCACGGATGCCGCGGTTCTGAAAGCCAATAACATCCAGAGCATTCTTGGGATCCAGTCGATCGATACCGGGATCCTCGGTGCGGTGATCGCCGGtatta > 2:1519292/1‑140 (MQ=255)
gcgGCAAACTTCTGGTTGACCAATAAAGGCATTCTGCCAACCACGGATGCCGCGGTTCTGAAAGCCAATAACATCCAGAGCATTCTTGGGATCCAGTCGATCGATACCGGGATCCTCGGTGCGGTGATCGCCGGtattat < 2:1336664/140‑1 (MQ=255)
gcgGCAAACTTCTGGTTGACCAATAAAGGCATTCTGCCAACCACGGATGCCGCGGTTCTGAAAGCCAATAACATCCAGAGCATTCTTGGGATCCAGTCGATCGATACCGGGATCCTCGGTGCGGTGATCGCCGGtattat < 2:541527/140‑1 (MQ=255)
cgGCAAACTTCTGGTTGACCAATAAAGGCATTCTGCCAACCACGGATGCCGCGGTTCTGAAAGCCAATAACATCCAGAGCATTCTTGGGATCCAGTCGATCGATACCGGGATCCTCGGTGCGGTGATCGc < 1:1381001/130‑1 (MQ=255)
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TTGGCTCGTTTGCTTTTAGTTTCCTGCCTGTCATGTTCTGTATCGCCATCCCGCTGGGCCTGGCACGCGAAAATAAAGGCGTAGCGGCATTCGCTGGCTTCATCGGTTATGCGGTAATGAACCTCGCGGTAAACTTCTGGTTGACCAATAAAGGCATTCTGCCAACCACGGATGCCGCGGTTCTGAAAGCCAATAACATCCAGAGCATTCTTGGGATCCAGTCGATCGATACCGGGATCCTCGGTGCGGTGATCGCCGGTATTAT > NC_000913/1699560‑1699824
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
