Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A7 F28 I1 R1 183 98.6 3427438 96.9% 3321187 138.7

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 1,869,913 C→T A320V (GCC→GTC)  yeaH → DUF444 domain‑containing protein YeaH

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,869,9130CT99.2% 464.0 / ‑4.5 131A320V (GCC→GTC) yeaHDUF444 domain‑containing protein YeaH
Reads supporting (aligned to +/- strand):  ref base C (0/1);  new base T (66/64);  total (66/65)
Fisher's exact test for biased strand distribution p-value = 4.96e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.29e-01

Only 100 of 133 total aligned reads displayed.

TCTGCTGTATCTGTTCCTCAGCAGAACGTATAAGAACGTGGAAGTCGTATACATCCGCCATCATACCCAGGCGAAAGAAGTCGATGAACATGAGTTTTTCTACTCGCAGGAAACAGGCGGCACCATTGTTTCCAGCGCCCTGAAACTGATGGATGAGGTAGTGAAAGAGCGTTATAACCCGGCACAGTGGAATATTTACGCTGCACAAGCATCGGACGGCGATAACTGGGCCGATGACTCTCCGCTTTGCCATGAAATCCTGGCGAAAAAATTA  >  NC_000913/1869776‑1870049
                                                                                                                                         |                                                                                                                                        
tCTGCTGTATCTGTTCCTCAGCAGAACGTATAAGAACGTGGAAGTCGTATACATCCGCCATCATACCCAGGCGAAAGAAGTCGATGAACATGAGTTTTTCTACTCGCAGGAAACAGGCGGCACCATTGTTTCCAGCGtcc                                                                                                                                        >  2:1679448/1‑140 (MQ=255)
  tgctgTATCTGTTCCTCAGCAGAACGTATAAGAACGTGGAAGTCGTATACATCCGCCATCATACCCAGGCGAAAGAAGTCGATGAACATGAGTTTTTCTACTCGCAGGAAACAGGCGGCACCATTGTTTCCAGCGTCCTg                                                                                                                                      >  2:267392/1‑140 (MQ=255)
  tgctgTATCTGTTCCTCAGCAGAACGTATAAGAACGTGGAAGTCGTATACATCCGCCATCATACCCAGGCGAAAGAAGTCGATGAACATGAGTTTTTCTACTCGCAGGAAACAGGCGGCACCATTGTTTCCAGCGTCCTg                                                                                                                                      >  2:712807/1‑140 (MQ=255)
   gctgTATCTGTTCCTCAGCAGAACGTATAAGAACGTGGAAGTCGTATACATCCGCCATCATACCCAGGCGAAAGAAGTCGATGAACATGAGTTTTTCTACTCGCAGGAAACAGGCGGCACCATTGTTTCCAGCGTCCTGa                                                                                                                                     <  1:983866/140‑1 (MQ=255)
    ctgTATCTGTTCCTCAGCAGAACGTATAAGAACGTGGAAGTCGTATACATCCGCCATCATACCCAGGCGAAAGAAGTCGATGAACATGAGTTTTTCTACTCGCAGGAAACAGGCGGCACCATTGTTTCCAGCGTCCTGaa                                                                                                                                    >  2:1015553/1‑140 (MQ=255)
    ctgTATCTGTTCCTCAGCAGAACGTATAAGAACGTGGAAGTCGTATACATCCGCCATCATACCCAGGCGAAAGAAGTCGATGAACATGAGTTTTTCTACTCGCAGGAAACAGGCGGCACCATTGTTTCCAGCGTCCTGaa                                                                                                                                    >  1:825936/1‑140 (MQ=255)
    ctgTATCTGTTCCTCAGCAGAACGTATAAGAACGTGGAAGTCGTATACATCCGCCATCATACCCAGGCGAAAGAAGTCGATGAACATGAGTTTTTCTACTCGCAGGAAACAGGCGGCACCATTGTTTCCAGCGTCCTGaa                                                                                                                                    >  1:1175900/1‑140 (MQ=255)
    ctgTATCTGTTCCTCAGCAGAACGTATAAGAACGTGGAAGTCGTATACATCCGCCATCATACCCAGGCGAAAGAAGTCGATGAACATGAGTTTTTCTACTCGCAGGAAACAGGCGGCACCATTGTTTCCAGCGTCCTGaa                                                                                                                                    >  1:1235790/1‑140 (MQ=255)
    ctgTATCTGTTCCTCAGCAGAACGTATAAGAACGTGGAAGTCGTATACATCCGCCATCATACCCAGGCGAAAGAAGTCGATGAACATGAGTTTTTCTACTCGCAGGAAACAGGCGGCACCATTGTTTCCAGCGTCCTGaa                                                                                                                                    >  2:1585886/1‑140 (MQ=255)
    ctgTATCTGTTCCTCAGCAGAACGTATAAGAACGTGGAAGTCGTATACATCCGCCATCATACCCAGGCGAAAGAAGTCGATGAACATGAGTTTTTCTACTCGCAGGAAACAGGCGGCACCATTGTTTCCAGCGTCCTGa                                                                                                                                     >  1:1312584/1‑139 (MQ=255)
    ctgTATCTGTTCCTCAGCAGAACGTATAAGAACGTGGAAGTCGTATACATCCGCCATCATACCCAGGCGAAAGAAGTCGATGAACATGAGTTTTTCTACTCGCAGGAAACAGGCGGCACCATTGTTTCCAGCGTCCTGa                                                                                                                                     <  2:1312584/139‑1 (MQ=255)
       tATCTGTTCCTCAGCAGAACGTATAAGAACGTGGAAGTCGTATACATCCGCCATCATACCCAGGCGAAAGAAGTCGATGAACATGAGTTTTTCTACTCGCAGGAAACAGGCGGCACCATTGTTTCCAGCGTCCTGaa                                                                                                                                    >  2:1611976/1‑137 (MQ=255)
       tATCTGTTCCTCAGCAGAACGTATAAGAACGTGGAAGTCGTATACATCCGCCATCATACCCAGGCGAAAGAAGTCGATGAACATGAGTTTTTCTACTCGCAGGAAACAGGCGGCACCATTGTTTCCAGCGTCCTGaa                                                                                                                                    <  1:1611976/137‑1 (MQ=255)
       tATCTGTTCCTCAGCAGAACGTATAAGAACGTGGAAGTCGTATACATCCGCCATCATACCCAGGCGAAAGAAGTCGATGAACATGAGTTTTTCTACTCGCAGGAAACAGGCGGCACCATTGTTTCCAGCGTCCTGAAACt                                                                                                                                 <  1:674082/140‑1 (MQ=255)
        aTCTGTTCCTCAGCAGAACGTATAAGAACGTGGAAGTCGTATACATCCGCCATCATACCCAGGCGAAAGAAGTCGATGAACATGAGTTTTTCTACTCGCAGGAAACAGGCGGCACCATTGTTTCCAGCGTCCTGAAACTg                                                                                                                                <  2:799186/140‑1 (MQ=255)
         tCTGTTCCTCAGCAGAACGTATAAGAACGTGGAAGTCGTATACATCCGCCATCATACCCAGGCGAAAGAAGTCGATGAACATGAGTTTTTCTACTCGCAGGAAACAGGCGGCACCATTGTTTCCAGCGTCCTGaaa                                                                                                                                   >  2:1294333/1‑136 (MQ=255)
            gTTCCTCAGCAGAACGTATAAGAACGTGGAAGTCGTATACATCCGCCATCATACCCAGGCGAAAGAAGTCGATGAACATGAGTTTTTCTACTCGCAGGAAACAGGCGGCACCATTGTTTCCAGCGTCCTGAAACTgatgg                                                                                                                            <  2:1481203/140‑1 (MQ=255)
              tCCTCAGCAGAACGTATAAGAACGTGGAAGTCGTATACATCCGCCATCATACCCAGGCGAAAGAAGTCGATGAACATGAGTTTTTCTACTCGCAGGAAACAGGCGGCACCATTGTTTCCAGCGTCCTg                                                                                                                                      <  1:219495/128‑1 (MQ=255)
              tCCTCAGCAGAACGTATAAGAACGTGGAAGTCGTATACATCCGCCATCATACCCAGGCGAAAGAAGTCGATGAACATGAGTTTTTCTACTCGCAGGAAACAGGCGGCACCATTGTTTCCAGCGTCCTGAAACTgatggat                                                                                                                          <  2:389253/140‑1 (MQ=255)
              tCCTCAGCAGAACGTATAAGAACGTGGAAGTCGTATACATCCGCCATCATACCCAGGCGAAAGAAGTCGATGAACATGAGTTTTTCTACTCGCAGGAAACAGGCGGCACCATTGTTTCCAGCGTCCTGAAACTgatggat                                                                                                                          <  2:226807/140‑1 (MQ=255)
              tCCTCAGCAGAACGTATAAGAACGTGGAAGTCGTATACATCCGCCATCATACCCAGGCGAAAGAAGTCGATGAACATGAGTTTTTCTACTCGCAGGAAACAGGCGGCACCATTGTTTCCAGCGTCCTGAAACTgatggat                                                                                                                          <  2:1235790/140‑1 (MQ=255)
              tCCTCAGCAGAACGTATAAGAACGTGGAAGTCGTATACATCCGCCATCATACCCAGGCGAAAGAAGTCGATGAACATGAGTTTTTCTACTCGCAGGAAACAGGCGGCACCATTGTTTCCAGCGTCCTGAAACTg                                                                                                                                >  2:599881/1‑134 (MQ=255)
                cTCAGCAGAACGTATAAGAACGTGGAAGTCGTATACATCCGCCATCATACCCAGGCGAAAGAAGTCGATGAACATGAGTTTTTCTACTCGCAGGAAACAGGCGGCACCATTGTTTCCAGCGTCCTGAAACTGATGGATGa                                                                                                                        <  1:1502044/140‑1 (MQ=255)
                 tCAGCAGAACGTATAAGAACGTGGAAGTCGTATACATCCGCCATCATACCCAGGCGAAAGAAGTCGATGAACATGAGTTTTTCTACTCGCAGGAAACAGGCGGCACCATTGTTTCCAGCGTCCTGAAACTGATGGATGAg                                                                                                                       >  1:1268604/1‑140 (MQ=255)
                 tCAGCAGAACGTATAAGAACGTGGAAGTCGTATACATCCGCCATCATACCCAGGCGAAAGAAGTCGATGAACATGAGTTTTTCTACTCGCAGGAAACAGGCGGCACCATTGTTTCCAGCGTCCTGAAACTGATGGATGAg                                                                                                                       >  1:378709/1‑140 (MQ=255)
                   agcagAACGTATAAGAACGTGGAAGTCGTATACATCCGCCATCATACCCAGGCGAAAGAAGTCGATGAACATGAGTTTTTCTACTCGCAGGAAACAGGCGGCACCATTGTTTCCAGCGTCCTGAAACTGATGGATGAGGt                                                                                                                     >  2:988655/1‑140 (MQ=255)
                   agcagAACGTATAAGAACGTGGAAGTCGTATACATCCGCCATCATACCCAGGCGAAAGAAGTCGATGAACATGAGTTTTTCTACTCGCAGGAAACAGGCGGCACCATTGTTTCCAGCGTCCTGAAACTGATGGATGAGGt                                                                                                                     >  2:623226/1‑140 (MQ=255)
                       gAACGTATAAGAACGTGGAAGTCGTATACATCCGCCATCATACCCAGGCGAAAGAAGTCGATGAACATGAGTTTTTCTACTCGCAGGAAACAGGCGGCACCATTGTTTCCAGCGTCCTGAAACTGATGGATGAGGTAGTg                                                                                                                 >  2:1361244/1‑140 (MQ=255)
                          cGTATAAGAACGTGGAAGTCGTATACATCCGCCATCATACCCAGGCGAAAGAAGTCGATGAACATGAGTTTTTCTACTCGCAGGAAACAGGCGGCACCATTGTTTCCAGCGTCCTGAAACTGATGGATGAGGTAGTGaaa                                                                                                              >  2:678815/1‑140 (MQ=255)
                          cGTATAAGAACGTGGAAGTCGTATACATCCGCCATCATAACCAGGCGAAAGAAGTCGATGAACATGAGTTTTTCTACTCGCAGGAAACAGGCGGCACCATTGTTTCCAGCGTCCTGAAACTGATGGATGAGGTAGTGaaa                                                                                                              <  1:177296/140‑1 (MQ=255)
                           gTATAAGAACGTGGAAGTCGTATACATCCGCCATCATACCCAGGCGAAAGAAGTCGATGAACATGAGTTTTTCTACTCGCAGGAAACAGGCGGCACCATTGTTTCCAGCGTCCTGAAACTGATGGATGAGGTAGTGAAag                                                                                                             <  2:1684036/140‑1 (MQ=255)
                           gTATAAGAACGTGGAAGTCGTATACATCCGCCATCATACCCAGGCGAAAGAAGTCGATGAACATGAGTTTTTCTACTCGCAGGAAACAGGCGGCACCATTGTTTCCAGCGTCCTGAAACTGATGGATGAGGTAGTGAAag                                                                                                             <  2:1169290/140‑1 (MQ=255)
                             ataAGAACGTGGAAGTCGTATACATCCGCCATCATACCCAGGCGAAAGAAGTCGATGAACATGAGTTTTTCTACTCGCAGGAAACAGGCGGCACCATTGTTTCCAGCGTCCTGAAACTGATGGATGAGGTAGTGAAagag                                                                                                           >  2:662995/1‑140 (MQ=255)
                             ataAGAACGTGGAAGTCGTATACATCCGCCATCATACCCAGGCGAAAGAAGTCGATGAACATGAGTTTTTCTACTCGCAGGAAACAGGCGGCACCATTGTTTCCAGCGTCCTGAAACTGATGGATGAGGTAGTGAAagag                                                                                                           >  2:1697721/1‑140 (MQ=255)
                             ataAGAACGTGGAAGTCGTATACATCCGCCATCATACCCAGGCGAAAGAAGTCGATGAACATGAGTTTTTCTACTCGCAGGAAACAGGCGGCACCATTGTTTCCAGCGTCCTGAAACTGATGGATGAGGTAGTGAAagag                                                                                                           <  2:1175900/140‑1 (MQ=255)
                                  aaCGTGGAAGTCGTATACATCCGCCATCATACCCAGGCGAAAGAAGTCGATGAACATGAGTTTTTCTACTCGCAGGAAACAGGCGGCACCATTGTTTCCAGCGTCCTGAAACTGATGGATGAGGTAGTGAAAGAGCGTta                                                                                                      <  1:1697721/140‑1 (MQ=255)
                                  aaCGTGGAAGTCGTATACATCCGCCATCATACCCAGGCGAAAGAAGTCGATGAACATGAGTTTTTCTACTCGCAGGAAACAGGCGGCACCATTGTTTCCAGCGTCCTGAAACTGATGGATGAGGTAGTGAAAGAGCGTta                                                                                                      <  1:662995/140‑1 (MQ=255)
                                    cGTGGAAGTCGTATACATCCGCCATCATACCCAGGCGAAAGAAGTCGATGAACATGAGTTTTTCTACTCGCAGGAAACAGGCGGCACCATTGTTTCCAGCGTCCTGAAACTGATGGATGAGGTAGTGAAAGAGCGTtata                                                                                                    >  2:132832/1‑140 (MQ=255)
                                    cGTGGAAGTCGTATACATCCGCCATCATACCCAGGCGAAAGAAGTCGATGAACATGAGTTTTTCTACTCGCAGGAAACAGGCGGCACCATTGTTTCCAGCGTCCTGAAACTGATGGATGAGGTAGTGAAAGAGCGTtata                                                                                                    >  2:866286/1‑140 (MQ=255)
                                    cGTGGAAGTCGTATACATCCGCCATCATACCCAGGCGAAAGAAGTCGATGAACATGAGTTTTTCTACTCGCAGGAAACAGGCGGCACCATTGTTTCCAGCGTCCTGAAACTGATGGATGAGGTAGTGAAAGAGCGTtata                                                                                                    >  2:806444/1‑140 (MQ=255)
                                    cGTGGAAGTCGTATACATCCGCCATCATACCCAGGCGAAAGAAGTCGATGAACATGAGTTTTTCTACTCGCAGGAAACAGGCGGCACCATTGTTTCCAGCGTCCTGAAACTGATGGATGAGGTAGTGAAAGAGCGTtata                                                                                                    >  2:980440/1‑140 (MQ=255)
                                     gTGGAAGTCGTATACATCCGCCATCATACCCAGGCGAAAGAAGTCGATGAACATGAGTTTTTCTACTCGCAGGAAACAGGCGGCACCATTGTTTCCAGCGTCCTGAAACTGATGGATGAGGTAGTGAAAGAGCGTTATaa                                                                                                   >  2:340762/1‑140 (MQ=255)
                                      tGGAAGTCGTATACATCCGCCATCATACCCAGGCGAAAGAAGTCGATGAACATGAGTTTTTCTACTCGCAGGAAACAGGCGGCACCATTGTTTCCAGCGTCCTGAAACTGATGGATGAGGTAGTGaaa                                                                                                              <  1:1180635/128‑1 (MQ=255)
                                      tGGAAGTCGTATACATCCGCCATCATACCCAGGCGAAAGAAGTCGATGAACATGAGTTTTTCTACTCGCAGGAAACAGGCGGCACCATTGTTTCCAGCGTCCTGAAACTGATGGATGAGGTAGTGAAAGAGCGTTATAAc                                                                                                  >  1:812985/1‑140 (MQ=255)
                                      tGGAAGTCGTATACATCCGCCATCATACCCAGGCGAAAGAAGTCGATGAACATGAGTTTTTCTACTCGCAGGAAACAGGCGGCACCATTGTTTCCAGCGTCCTGAAACTGATGGATGAGGTAGTGAAAGAGCGTTATAAc                                                                                                  >  2:976433/1‑140 (MQ=255)
                                      tGGAAGTCGTATACATCCGCCATCATACCCAGGCGAAAGAAGTCGATGAACATGAGTTTTTCTACTCGCAGGAAACAGGCGGCACCATTGTTTCCAGCGTCCTGAAACTGATGGATGAGGTAGTGAAAGAGCGTTATAAc                                                                                                  >  1:1462616/1‑140 (MQ=255)
                                       ggAAGTCGTATACATCCGCCATCATACCCAGGCGAAAGAAGTCGATGAACATGAGTTTTTCTACTCGCAGGAAACAGGCGGCACCATTGTTTCCAGCGTCCTGAAACTGATGGATGAGGTAGTGAAAGAGCGTTATAAcc                                                                                                 <  1:998358/140‑1 (MQ=255)
                                       ggAAGTCGTATACATCCGCCATCATACCCAGGCGAAAGAAGTCGATGAACATGAGTTTTTCTACTCGCAGGAAACAGGCGGCACCATTGTTTCCAGCGTCCTGAAACTGATGGATGAGGTAGTGAAAGAGCGTTATAAcc                                                                                                 <  2:910671/140‑1 (MQ=255)
                                            tCGTATACATCCGCCATCATACCCAGGCGAAAGAAGTCGATGAACATGAGTTTTTCTACTCGCAGGAAACAGGCGGCACCATTGTTTCCAGCGTCCTGAAACTGATGGATGAGGTAGTGAAAGAGCGTTATAACCCGGca                                                                                            <  1:1679448/140‑1 (MQ=255)
                                            tCGTATACATCCGCCATCATACCCAGGCGAAAGAAGTCGATGAACATGAGTTTTTCTACTCGCAGGAAACAGGCGGCACCATTGTTTCCAGCGTCCTGAAACTGATGGATGAGGTAGTGAAAGAGCGTTATAACCCGGca                                                                                            <  1:294670/140‑1 (MQ=255)
                                            tCGTATACATCCGCCATCATACCCAGGCGAAAGAAGTCGATGAACATGAGTTTTTCTACTCGCAGGAAACAGGCGGCACCATTGTTTCCAGCGTCCTGAAACTGATGGATGAGGTAGTGAAAGAGCGTTATAACCCGGca                                                                                            <  1:678815/140‑1 (MQ=255)
                                            tCGTATACATCCGCCATCATACCCAGGCGAAAGAAGTCGATGAACATGAGTTTTTCTACTCGCAGGAAACAGGCGGCACCATTGTTTCCAGCGTCCTGAAACTGATGGATGAGGTAGTGAAAGAGCGTTATAACCCGGca                                                                                            <  1:1015553/140‑1 (MQ=255)
                                               tataCATCCGCCATCATACCCAGGCGAAAGAAGTCGATGAACATGAGTTTTTCTACTCGCAGGAAACAGGCGGCACCATTGTTTCCAGCGTCCTGAAACTGATGGATGAGGTAGTGAAAGAGCGTTATAACCCGGCACAg                                                                                         >  1:197729/1‑140 (MQ=255)
                                               tataCATCCGCCATCATACCCAGGCGAAAGAAGTCGATGAACATGAGTTTTTCTACTCGCAGGAAACAGGCGGCACCATTGTTTCCAGCGTCCTGAAACTGATGGATGAGGTAGTGAAAGAGCGTTATAACCCGGCACAg                                                                                         >  1:790884/1‑140 (MQ=255)
                                                  aCATCCGCCATCATACCCAGGCGAAAGAAGTCGATGAACATGAGTTTTTCTACTCGCAGGAAACAGGCGGCACCATTGTTTCCAGCGTCCTGAAACTGATGGATGAGGTAGTGAAAGAGCGTTATAACCCGGCACAGTgg                                                                                      <  2:198415/140‑1 (MQ=255)
                                                      ccGCCATCATACCCAGGCGAAAGAAGTCGATGAACATGAGTTTTTCTACTCGCAGGAAACAGGCGGCACCATTGTTTCCAGCGTCCTGAAACTGATGGATGAGGTAGTGAAAGAGCGTTATAACCCGGCACAGTGGAata                                                                                  >  1:1248443/1‑140 (MQ=255)
                                                      ccGCCATCATACCCAGGCGAAAGAAGTCGATGAACATGAGTTTTTCTACTCGCAGGAAACAGGCGGCACCATTGTTTCCAGCGTCCTGAAACTGATGGATGAGGTAGTGAAAGAGCGTTATAACCCGGCACAGTGGAata                                                                                  >  1:402275/1‑140 (MQ=255)
                                                      ccGCCATCATACCCAGGCGAAAGAAGTCGATGAACATGAGTTTTTCTACTCGCAGGAAACAGGCGGCACCATTGTTTCCAGCGTCCTGAAACTGATGGATGAGGTAGTGAAAGAGCGTTATAACCCGGCACAGTGGAata                                                                                  >  1:44659/1‑140 (MQ=255)
                                                      ccGCCATCATACCCAGGCGAAAGAAGTCGATGAACATGAGTTTTTCTACTCGCAGGAAACAGGCGGCACCATTGTTTCCAGCGTCCTGAAACTGATGGATGAGGTAGTGAAAGAGCGTTATAACCCGGCACAGTGGAata                                                                                  >  2:587856/1‑140 (MQ=255)
                                                      ccGCCATCATACCCAGGCGAAAGAAGTCGATGAACATGAGTTTTTCTACTCGCAGGAAACAGGCGGCACCATTGTTTCCAGCGTCCTGAAACTGATGGATGAGGTAGTGAAAGAGCGTTATAACCCGGCACAGTGGAata                                                                                  >  1:783204/1‑140 (MQ=255)
                                                      ccGCCATCATACCCAGGCGAAAGAAGTCGATGAACATGAGTTTTTCTACTCGCAGGAAACAGGCGGCACCATTGTTTCCAGCGTCCTGAAACTGATGGATGAGGTAGTGAAAGAGCGTTATAACCCGGCACAGTGGAata                                                                                  >  1:1134884/1‑140 (MQ=255)
                                                      ccGCCATCATACCCAGGCGAAAGAAGTCGATGAACATGAGTTTTTCTACTCGCAGGAAACAGGCGGCACCATTGTTTCCAGCGTCCTGAAACTGATGGATGAGGTAGTGAAAGAGCGTTATAACCCGGCACAGTGGAata                                                                                  >  1:1088243/1‑140 (MQ=255)
                                                        gCCATCATACCCAGGCGAAAGAAGTCGATGAACATGAGTTTTTCTACTCGCAGGAAACAGGCGGCACCATTGTTTCCAGCGTCCTGAAACTGATGGATGAGGTAGTGAAAGAGCGTTATAACCCGGCACAGTgg                                                                                      >  1:463937/1‑134 (MQ=255)
                                                        gCCATCATACCCAGGCGAAAGAAGTCGATGAACATGAGTTTTTCTACTCGCAGGAAACAGGCGGCACCATTGTTTCCAGCGTCCTGAAACTGATGGATGAGGTAGTGAAAGAGCGTTATAACCCGGCACAGTgg                                                                                      <  2:1203658/134‑1 (MQ=255)
                                                          catcatACCCAGGCGAAAGAAGTCGATGAACATGAGTTTTTCTACTCGCAGGAAACAGGCGGCACCATTGTTTCCAGCGTCCTGAAACTGATGGATGAGGTAGTGAAAGAGCGTTATAACCCGGCACAGTGGAATATTTa                                                                              <  2:402275/140‑1 (MQ=255)
                                                          catcatACCCAGGCGAAAGAAGTCGATGAACATGAGTTTTTCTACTCGCAGGAAACAGGCGGCACCATTGTTTCCAGCGTCCTGAAACTGATGGATGAGGTAGTGAAAGAGCGTTATAACCCGGCACAGTGGAATATTTa                                                                              <  1:319297/140‑1 (MQ=255)
                                                           atcatACCCAGGCGAAAGAAGTCGATGAACATGAGTTTTTCTACTCGCAGGAAACAGGCGGCACCATTGTTTCCAGCGTCCTGAAACTGATGGATGAGGTAGTGAAAGAGCGTTATAACCCGGCACAGTGGAATATTTAc                                                                             <  1:1633042/140‑1 (MQ=255)
                                                           atcatACCCAGGCGAAAGAAGTCGATGAACATGAGTTTTTCTACTCGCAGGAAACAGGCGGCACCATTGTTTCCAGCGTCCTGAAACTGATGGATGAGGTAGTGAAAGAGCGTTATAACCCGGCACAGTGGAATATTTAc                                                                             <  1:623226/140‑1 (MQ=255)
                                                            tcatACCCAGGCGAAAGAAGTCGATGAACATGAGTTTTTCTACTCGCAGGAAACAGGCGGCACCATTGTTTCCAGCGTCCTGAAACTGATGGATGAGGTAGTGAAAGAGCGTTATAACCCGGCACAGTGGAATATTTACg                                                                            <  1:941111/140‑1 (MQ=255)
                                                            tcatACCCAGGCGAAAGAAGTCGATGAACATGAGTTTTTCTACTCGCAGGAAACAGGCGGCACCATTGTTTCCAGCGTCCTGAAACTGATGGATGAGGTAGTGAAAGAGCGTTATAACCCGGCACAGTGGAATATTTACg                                                                            <  2:44659/140‑1 (MQ=255)
                                                            tcatACCCAGGCGAAAGAAGTCGATGAACATGAGTTTTTCTACTCGCAGGAAACAGGCGGCACCATTGTTTCCAGCGTCCTGAAACTGATGGATGAGGTAGTGAAAGAGCGTTATAACCCGGCACAGTGGAATATTTACg                                                                            <  2:344560/140‑1 (MQ=255)
                                                            tcatACCCAGGCGAAAGAAGTCGATGAACATGAGTTTTTCTACTCGCAGGAAACAGGCGGCACCATTGTTTCCAGCGCCCTGAAACTGATGGATGAGGTAGTGAAAGAGCGTTATAACCCGGCACAGTGGAATATTTACg                                                                            <  1:267548/140‑1 (MQ=255)
                                                             catACCCAGGCGAAAGAAGTCGATGAACATGAGTTTTTCTACTCGCAGGAAACAGGCGGCACCATTGTTTCCAGCGTCCTGAAACTGATGGATGAGGTAGTGAAAGAGCGTTATAACCCGGCACAGTGGAATATTTACGc                                                                           <  2:67325/140‑1 (MQ=255)
                                                             catACCCAGGCGAAAGAAGTCGATGAACATGAGTTTTTCTACTCGCAGGAAACAGGCGGCACCATTGTTTCCAGCGTCCTGAAACTGATGGATGAGGTAGTGAAAGAGCGTTATAACCCGGCACAGTGGAATATTTACGc                                                                           <  2:1268604/140‑1 (MQ=255)
                                                               tACCCAGGCGAAAGAAGTCGATGAACATGAGTTTTTCTACTCGCAGGAAACAGGCGGCACCATTGTTTCCAGCGTCCTGAAACTGATGGATGAGGTAGTGAAAGAGCGTTATAACCCGGCACAGTGGAATATTTACGCTg                                                                         <  2:825936/140‑1 (MQ=255)
                                                                  ccAGGCGAAAGAAGTCGATGAACATGAGTTTTTCTACTCGCAGGAAACAGGCGGCACCATTGTTTCCAGCGTCCTGAAACTGATGGATGAGGTAGTGAAAGAGCGTTATAACCCGGCACAGTGGAATATTTACGCTGcac                                                                      <  1:980440/140‑1 (MQ=255)
                                                                      gCGAAAGAAGTCGATGAACATGAGTTTTTCTACTCGCAGGAAACAGGCGGCACCATTGTTTCCAGCGTCCTGAAACTGATGGATGAGGTAGTGAAAGAGCGTTATAACCCGGCACAGTGGAATATTTACGCTGCACAAGc                                                                  >  2:205544/1‑140 (MQ=255)
                                                                      gCGAAAGAAGTCGATGAACATGAGTTTTTCTACTCGCAGGAAACAGGCGGCACCATTGTTTCCAGCGTCCTGAAACTGATGGATGAGGTAGTGAAAGAGCGTTATAACCCGGCACAGTGGAATATTTACGCTGCACAAGc                                                                  >  2:679658/1‑140 (MQ=255)
                                                                      gCGAAAGAAGTCGATGAACATGAGTTTTTCTACTCGCAGGAAACAGGCGGCACCATTGTTTCCAGCGTCCTGAAACTGATGGATGAGGTAGTGAAAGAGCGTTATAACCCGGCACAGTGGAATATTTACGCTGCACAAGc                                                                  >  1:256364/1‑140 (MQ=255)
                                                                      gCGAAAGAAGTCGATGAACATGAGTTTTTCTACTCGCAGGAAACAGGCGGCACCATTGTTTCCAGCGTCCTGAAACTGATGGATGAGGTAGTGAAAGAGCGTTATAACCCGGCACAGTGGAATATTTACGCTGCACAAGc                                                                  >  2:616472/1‑140 (MQ=255)
                                                                           agaagTCGATGAACATGAGTTTTTCTACTCGCAGGAAACAGGCGGCACCATTGTTTCCAGCGTCCTGAAACTGATGGATGAGGTAGTGAAAGAGCGTTATAACCCGGCACAGTGGAATATTTACGCTGCACAAGCATCgg                                                             <  1:157302/140‑1 (MQ=255)
                                                                           agaagTCGATGAACATGAGTTTTTCTACTCGCAGGAAACAGGCGGCACCATTGTTTCCAGCGTCCTGAAACTGATGGATGAGGTAGTGAAAGAGCGTTATAACCCGGCACAGTGGAATATTTACGCTGCACAAGCATCgg                                                             <  1:205544/140‑1 (MQ=255)
                                                                            gaagTCGATGAACATGAGTTTTTCTACTCGCAGGAAACAGGCGGCACCATTGTTTCCAGCGTCCTGAAACTGATGGATGAGGTAGTGAAAGAGCGTTATAACCCGGCACAGTGGAATATTTACGCTGCACAAGCATCGGa                                                            <  2:1448768/140‑1 (MQ=255)
                                                                             aagTCGATGAACATGAGTTTTTCTACTCGCAGGAAACAGGCGGCACCATTGTTTCCAGCGTCCTGAAACTGATGGATGAGGTAGTGAAAGAGCGTTATAACCCGGCACAGTGGAATATTTACGCTGCACAAGCATCGGAc                                                           <  2:1134884/140‑1 (MQ=255)
                                                                                       aCATGAGTTTTTCTACTCGCAGGAAACAGGCGGCACCATTGTTTCCAGCGTCCTGAAACTGATGGATGAGGTAGTGAAAGAGCGTTATAACCCGGCACAGTGGAATATTTACGCTGCACAAGCATCGGACGGCGATAACt                                                 <  1:616472/140‑1 (MQ=255)
                                                                                       aCATGAGTTTTTCTACTCGCAGGAAACAGGCGGCACCATTGTTTCCAGCGTCCTGAAACTGATGGATGAGGTAGTGAAAGAGCGTTATAACCCGGCACAGTGGAATATTTACGCTGCACAAGCATCGGACGGCGATAACt                                                 <  1:1077446/140‑1 (MQ=255)
                                                                                         aTGAGTTTTTCTACTCGCAGGAAACAGGCGGCACCATTGTTTCCAGCGTCCTGAAACTGATGGATGAGGTAGTGAAAGAGCGTTATAACCCGGCACAGTGGAATATTTACGCTGCACAAGCATCGGACGGCGATAACTgg                                               <  1:691771/140‑1 (MQ=255)
                                                                                              tttttCTACTCGCAGGAAACAGGCGGCACCATTGTTTCCAGCGTCCTGAAACTGATGGATGAGGTAGTGAAAGAGCGTTATAACCCGGCACAGTGGAATATTTACGCTGCACAAGCATCGGACGGCGATAACTGGGCCGa                                          >  1:1422135/1‑140 (MQ=255)
                                                                                              tttttCTACTCGCAGGAAACAGGCGGCACCATTGTTTCCAGCGTCCTGAAACTGATGGATGAGGTAGTGAAAGAGCGTTATAACCCGGCACAGTGGAATATTTACGCTGCACAAGCATCGGACGGCGATAACTGGGCCGa                                          <  2:256364/140‑1 (MQ=255)
                                                                                              tttttCTACTCGCAGGAAACAGGCGGCACCATTGTTTCCAGCGTCCTGAAACTGATGGATGAGGTAGTGAAAGAGCGTTATAACCCGGCACAGTGGAATATTTACGCTGCACAAGCATCGGACGGCGATAACTGGGCCGa                                          <  1:976433/140‑1 (MQ=255)
                                                                                                tttCTACTCGCAGGAAACAGGCGGCACCATTGTTTCCAGCGTCCTGAAACTGATGGATGAGGTAGTGAAAGAGCGTTATAACCCGGCACAGTGGAATATTTACGCTGCACAAGCATCGGACGGCGATAACTGGGCCGATg                                        >  2:1382167/1‑140 (MQ=255)
                                                                                                   cTACTCGCAGGAAACAGGCGGCACCATTGTTTCCAGCGTCCTGAAACTGATGGATGAGGTAGTGAAAGAGCGTTATAACCCGGCACAGTGGAATATTTACGCTGCACAAGCATCGGACGGCGATAACTGGGCCGATGAct                                     <  1:806444/140‑1 (MQ=255)
                                                                                                           aGGAAACAGGCGGCACCATTGTTTCCAGCGTCCTGAAACTGATGGATGAGGTAGTGAAAGAGCGTTATAACCCGGCACAGTGGAATATTTACGCTGCACAAGCATCGGACGGCGATAACTGGGCCGATGACTCTCCGCtt                             <  2:197729/140‑1 (MQ=255)
                                                                                                                              tGTTTCCAGCGTCCTGAAACTGATGGATAAGGTAGTGAAAGAGCGTTATAACCCGGCACAGTGGAATATTTACGCTGCACAAGCATCGGACGGCGATAACTGGGCCGATGACTCTCCGCTTTGCCATGAAATCCTGGCGa          >  2:595434/1‑140 (MQ=255)
                                                                                                                                tttCCAGCGTCCTGAAACTGATGGATGAGGTAGTGAAAGAGCGTTATAACCCGGCACAGTGGAATATTTACGCTGCACAAGCATCGGACGGCGATAACTGGGCCGATGACTCTCCGCTTTGCCATGAAATCCTGGCGaaa        <  1:1382167/140‑1 (MQ=255)
                                                                                                                                tttCCAGCGTCCTGAAACTGATGGATGAGGTAGTGAAAGAGCGTTATAACCCGGCACAGTGGAATATTTACGCTGCACAAGCATCGGACGGCGATAACTGGGCCGATGACTCTCCGCTTTGCCATGAAATCCTGGCGaaa        <  1:1103649/140‑1 (MQ=255)
                                                                                                                                   ccAGCGTCCTGAAACTGATGGATGAGGTAGTGAAAGAGCGTTATAACCCGGCACAGTGGAATATTTACGCTGCACAAGCATCGGACGGCGATAACTGGGCCGATGACTCTCCGCTTTGCCATGAAATCCTGGCGaaaaaa     <  1:587856/140‑1 (MQ=255)
                                                                                                                                     aGCGTCCTGAAACTGATGGATGAGGTAGTGAAAGAGCGTTATAACCCGGCACAGTGGAATATTTACGCTGCACAAGCATCGGACGGCGATAACTGGGCCGATGACTCTCCGCTTTGCCATGAAATCCTGGCGAAAAAatt   >  1:392693/1‑140 (MQ=255)
                                                                                                                                     aGCGTCCTGAAACTGATGGATGAGGTAGTGAAAGAGCGTTATAACCCGGCACAGTGGAATATTTACGCTGCACAAGCATCGGACGGCGATAACTGGGCCGATGACTCTCCGCTTTGCCATGAAATCCTGGCGAAAAAatt   >  1:865149/1‑140 (MQ=255)
                                                                                                                                      gcgtCCTGAAACTGATGGATGAGGTAGTGAAAGAGCGTTATAACCCGGCACAGTGGAATATTTACGCTGCACAAGCATCGGACGGCGATAACTGGGCCGATGACTCTCCGCTTTGCCATGAAATCCTGGCGAAAAAatta  >  2:368294/1‑140 (MQ=255)
                                                                                                                                         |                                                                                                                                        
TCTGCTGTATCTGTTCCTCAGCAGAACGTATAAGAACGTGGAAGTCGTATACATCCGCCATCATACCCAGGCGAAAGAAGTCGATGAACATGAGTTTTTCTACTCGCAGGAAACAGGCGGCACCATTGTTTCCAGCGCCCTGAAACTGATGGATGAGGTAGTGAAAGAGCGTTATAACCCGGCACAGTGGAATATTTACGCTGCACAAGCATCGGACGGCGATAACTGGGCCGATGACTCTCCGCTTTGCCATGAAATCCTGGCGAAAAAATTA  >  NC_000913/1869776‑1870049

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A