Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A7 F28 I1 R1	183	98.6	3427438	96.9%	3321187	138.7

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,927,068	T→C	Y591C (TAC→TGC)	ptrB ←	oligopeptidase B

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,927,068	0	T	C	100.0%	252.8 / NA	68	Y591C (TAC→TGC)	ptrB	oligopeptidase B
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (31/37); total (31/37)

TCAGCTCGCGCAATTTAGCGACCCATTTTGCCGGTTCCCAATATTGCACCTGAGAATCGTGCAAACCGGTCGTTACCAGTAAATGCGGATAAGCCTGTGCGGTGACGTTGTCATACGGGCTGTAGCTTTTCATGTACTCGTAATATTGCGGATCCTGCGGGTTACCCCACTCTTCAAACTCACCAGTGGTAAGAGGAATTGATTCATCAAGCATCGTTGTTACAACATCAACAAACGGTACCTGGGCGATAACGCCGTGGAATAATTCCG  >  NC_000913/1926934‑1927203

tCAGCTCGCGCAATTTAGCGACCCATTTTGCCGGTTCCCAATATTGCACCTGAGAATCGTGCAAACCGGTCGTTACCAGTAAATGCGGATAAGCCTGTGCGGTGACGTTGTCATACGGGCTGTAGCTTTTCATGCACTCg                                                                                                                                    <  2:1364613/140‑1 (MQ=255)

tCAGCTCGCGCAATTTAGCGACCCATTTTGCCGGTTCCCAATATTGCACCTGAGAATCGTGCAAACCGGTCGTTACCAGTAAATGCGGATAAGCCTGTGCGGTGACGTTGTCATACGGGCTGTAGCTTTTCATGCACTCg                                                                                                                                    >  1:529490/1‑140 (MQ=255)

        cgcAATTTAGCGACCCATTTTGCCGGTTCCCAATATTGCACCTGAGAATCGTGCAAACCGGTCGTTACCAGTAAATGCGGATAAGCCTGTGCGGTGACGTTGTCATACGGGCTGTAGCTTTTCATGCACTCGTAATATTg                                                                                                                            <  2:398479/140‑1 (MQ=255)

          cAATTTAGCGACCCATTTTGCCGGTTCCCAATATTGCACCTGAGAATCGTGCAAACCGGTCGTTACCAGTAAATGCGGATAAGCCTGTGCGGTGACGTTGTCATACGGGCTGTAGCTTTTCATGCACTCGTAATATTGCg                                                                                                                          <  2:476255/140‑1 (MQ=255)

           aaTTTAGCGACCCATTTTGCCGGTTCCCAATATTGCACCTGAGAATCGTGCAAACCGGTCGTTACCAGTAAATGCGGATAAGCCTGTGCGGTGACGTTGTCATACGGGCTGTAGCTTTTCATGCACTCGTAATATTGCgg                                                                                                                         <  1:1387946/140‑1 (MQ=255)

           aaTTTAGCGACCCATTTTGCCGGTTCCCAATATTGCACCTGAGAATCGTGCAAACCGGTCGTTACCAGTAAATGCGGATAAGCCTGTGCGGTGACGTTGTCATACGGGCTGTAGCTTTTCATGCACTCGTAATATTGCgg                                                                                                                         <  1:418351/140‑1 (MQ=255)

           aaTTTAGCGACCCATTTTGCCGGTTCCCAATATTGCACCTGAGAATCGTGCAAACCGGTCGTTACCAGTAAATGCGGATAAGCCTGTGCGGTGACGTTGTCATACGGGCTGTAGCTTTTCATGCACTCGTAATATTGCgg                                                                                                                         <  2:903586/140‑1 (MQ=255)

               tAGCGACCCATTTTGCCGGTTCCCAATATTGCACCTGAGAATCGTGCAAACCGGTCGTTACCAGTAAATGCGGATAAGCCTGTGCGGTGACGTTGTCATACGGGCTGTAGCTTTTCATGCACTCGTAATATTGCGGATcc                                                                                                                     <  2:117666/140‑1 (MQ=255)

                  cGACCCATTTTGCCGGTTCCCAATATTGCACCTGAGAATCGTGCAAACCGGTCGTTACCAGTAAATGCGGATAAGCCTGTGCGGTGACGTTGTCATACGGGCTGTAGCTTTTCATGCACTCGTAATATTGCGGATCCTGc                                                                                                                  >  1:97015/1‑140 (MQ=255)

                     cccATTTTGCCGGTTCCCAATATTGCACCTGAGAATCGTGCAAACCGGTCGTTACCAGTAAATGCGGATAAGCCTGTGCGGTGACGTTGTCATACGGGCTGTAGCTTTTCATGCACTCGTAATATTGCGGATCCTGCggg                                                                                                               >  2:1622252/1‑140 (MQ=255)

                      ccATTTTGCCGGTTCCCAATATTGCACCTGAGAATCGTGCAAACCGGTCGTTACCAGTAAATGCGGATAAGCCTGTGCGGTGACGTTGTCATACGGGCTGTAGCTTTTCATGCACTCGTAATATTGCGGATCCTGCGGGt                                                                                                              <  2:181999/140‑1 (MQ=255)

                       cATTTTGCCGGTTCCCAATATTGCACCTGAGAATCGTGCAAACCGGTCGTTACCAGTAAATGCGGATAAGCCTGTGCGGTGACGTTGTCATACGGGCTGTAGCTTTTCATGCACTCGTAATATTGCGGATCCTGCGGGtt                                                                                                             >  1:762289/1‑140 (MQ=255)

                        aTTTTGCCGGTTCCCAATATTGCACCTGAGAATCGTGCAAACCGGTCGTTACCAGTAAATGCGGATAAGCCTGTGCGGTGACGTTGTCATACGGGCTGTAGCTTTTCATGCACTCGTAATATTGCGGATCCTGCGGGTTa                                                                                                            <  1:168047/140‑1 (MQ=255)

                        aTTTTGCCGGTTCCCAATATTGCACCTGAGAATCGTGCAAACCGGTCGTTACCAGTAAATGCGGATAAGCCTGTGCGGTGACGTTGTCATACGGGCTGTAGCTTTTCATGCACTCGTAATATTGCGGATCCTGCGGGTTa                                                                                                            <  1:516282/140‑1 (MQ=255)

                              ccGGTTCCCAATATTGCACCTGAGAATCGTGCAAACCGGTCGTTACCAGTAAATGCGGATAAGCCTGTGCGGTGACGTTGTCATACGGGCTGTAGCTTTTCATGCACTCGTAATATTGCGGATCCTGCGGGTTACCCCAc                                                                                                      <  2:1652106/140‑1 (MQ=255)

                                  ttCCCAATATTGCACCTGAGAATCGTGCAAACCGGTCGTTACCAGTAAATGCGGATAAGCCTGTGCGGTGACGTTGTCATACGGGCTGTAGCTTTTCATGCACTCGTAATATTGCGGATCCTGCGGGTTACCCCACTCtt                                                                                                  >  2:654200/1‑140 (MQ=255)

                                   tCCCAATATTGCACCTGAGAATCGTGCAAACCGGTCGTTACCAGTAAATGCGGATAAGCCTGTGCGGTGACGTTGTCATACGGGCTGTAGCTTTTCATGCACTCGTAATATTGCGGATCCTGCGGGTTACCCCACTCTTc                                                                                                 <  2:375864/140‑1 (MQ=255)

                                   tCCCAATATTGCACCTGAGAATCGTGCAAACCGGTCGTTACCAGTAAATGCGGATAAGCCTGTGCGGTGACGTTGTCATACGGGCTGTAGCTTTTCATGCACTCGTAATATTGCGGATCCTGCGGGTTACCCCACTCTTc                                                                                                 <  1:1609421/140‑1 (MQ=255)

                                      cAATATTGCACCTGAGAATCGTGCAAACCGGTCGTTACCAGTAAATGCGGATAAGCCTGTGCGGTGACGTTGTCATACGGGCTGTAGCTTTTCATGCACTCGTAATATTGCGGATCCTGCGGGTTACCCCACTCTTCaaa                                                                                              <  2:97015/140‑1 (MQ=255)

                                           ttGCACCTGAGAATCGTGCAAACCGGTCGTTACCAGTAAATGCGGATAAGCCTGTGCGGTGACGTTGTCATACGGGCTGTAGCTTTTCATGCACTCGTAATATTGCGGATCCTGCGGGTTGCCCCACTCTTCAAACTcgc                                                                                         <  2:1439261/140‑3 (MQ=255)

                                           ttGCACCTGAGAATCGTGCAAACCGGTCGTTACCAGTAAATGCGGATAAGCCTGTGCGGTGACGTTGTCATACGGGCTGTAGCTTTTCATGCACTCGTAATATTGCGGATCCTGCGGGTTACCCCACTCTTCAAACTCAc                                                                                         <  2:529490/140‑1 (MQ=255)

                                           ttGCACCTGAGAATCGTGCAAACCGGTCGTTACCAGTAAATGCGGATAAGCCTGTGCGGTGACGTTGTCATACGGGCTGTAGCTTTTCATGCACTCGTAATATTGCGGATCCTGCGGGTTACCCCACTCTTCAAACTCAc                                                                                         <  1:524881/140‑1 (MQ=255)

                                           ttGCACCTGAGAATCGTGCAAACCGGTCGTTACCAGTAAATGCGGATAAGCCTGTGCGGTGACGTTGTCATACGGGCTGTAGCTTTTCATGCACTCGTAATATTGCGGATCCTGCGGGTTACCCCACTCTTCAAACTCAc                                                                                         <  1:1708970/140‑1 (MQ=255)

                                            tGCACCTGAGAATCGTGCAAACCGGTCGTTACCAGTAAATGCGGATAAGCCTGTGCGGTGACGTTGTCATACGGGCTGTAGCTTTTCATGCACTCGTAATATTGCGGATCCTGCGGGTTACCCCACTCTTCAAACTCAcc                                                                                        <  1:1571135/140‑1 (MQ=255)

                                              cACCTGAGAATCGTGCAAACCGGTCGTTACCAGTAAATGCGGATAAGCCTGTGCGGTGACGTTGTCATACGGGCTGTAGCTTTTCATGCACTCGTAATATTGCGGATCCTGCGGGTTACCCCACTCTTCAAACTCAc                                                                                         >  2:243549/1‑137 (MQ=255)

                                              cACCTGAGAATCGTGCAAACCGGTCGTTACCAGTAAATGCGGATAAGCCTGTGCGGTGACGTTGTCATACGGGCTGTAGCTTTTCATGCACTCGTAATATTGCGGATCCTGCGGGTTACCCCACTCTTCAAACTCAc                                                                                         <  1:243549/137‑1 (MQ=255)

                                              cACCTGAGAATCGTGCAAACCGGTCGTTACCAGTAAATGCGGATAAGCCTGTGCGGTGACGTTGTCATACGGGCTGTAGCTTTTCATGCACTCGTAATATTGCGGATCCTGCGGGTTACCCCACTCTTCAAACTCACCAg                                                                                      >  2:1680089/1‑140 (MQ=255)

                                              cACCTGAGAATCGTGCAAACCGGTCGTTACCAGTAAATGCGGATAAGCCTGTGCGGTGACGTTGTCATACGGGCTGTAGCTTTTCATGCACTCGTAATATTGCGGATCCTGCGGGTTACCCCACTCTTCAAACTCACCAg                                                                                      >  1:268629/1‑140 (MQ=255)

                                                   gagaATCGTGCAAACCGGTCGTTACCAGTAAATGCGGATAAGCCTGTGCGGTGACGTTGTCATACGGGCTGTAGCTTTTCATGCACTCGTAATATTGCGGATCCTGCGGGTTACCCCACTCTTCAAACTCACCAGTGGTa                                                                                 >  2:526765/1‑140 (MQ=255)

                                                    agaATCGTGCAAACCGGTCGTTACCAGTAAATGCGGATAAGCCTGTGCGGTGACGTTGTCATACGGGCTGTAGCTTTTCATGCACTCGTAATATTGCGGATCCTGCGGGTTACCCCACTCTTCAAACTCACCAGTGGTaa                                                                                >  2:76026/1‑140 (MQ=255)

                                                           tGCAAACCGGTCGTTACCAGTAAATGCGGATAAGCCTGTGCGGTGACGTTGTCATACGGGCTGTAGCTTTTCATGCACTCGTAATATTGCGGATCCTGCGGGTTACCCCACTCTTCAAACTCACCAGTGGTAag                                                                               >  1:1610340/1‑134 (MQ=255)

                                                           tGCAAACCGGTCGTTACCAGTAAATGCGGATAAGCCTGTGCGGTGACGTTGTCATACGGGCTGTAGCTTTTCATGCACTCGTAATATTGCGGATCCTGCGGGTTACCCCACTCTTCAAACTCACCAGTGGTAag                                                                               <  2:1610340/134‑1 (MQ=255)

                                                           tGCAAACCGGTCGTTACCAGTAAATGCGGATAAGCCTGTGCGGTGACGTTGTCATACGGGCTGTAGCTTTTCATGCACTCGTAATATTGCGGATCCTGCGGGTTACCCCACTCTTCAAACTCACCAGTGGTAAGAGGAAt                                                                         >  2:971615/1‑140 (MQ=255)

                                                           tGCAAACCGGTCGTTACCAGTAAATGCGGATAAGCCTGTGCGGTGACGTTGTCATACGGGCTGTAGCTTTTCATGCACTCGTAATATTGCGGATCCTGCGGGTTACCCCACTCTTCAAACTCACCAGTGGTAAGAGGAAt                                                                         >  1:2364/1‑140 (MQ=255)

                                                           tGCAAACCGGTCGTTACCAGTAAATGCGGATAAGCCTGTGCGGTGACGTTGTCATACGGGCTGTAGCTTTTCATGCACTCGTAATATTGCGGATCCTGCGGGTTACCCCACTCTTCAAACTCACCAGTGGTAAGAGGAAt                                                                         >  1:263385/1‑140 (MQ=255)

                                                               aaCCGGTCGTTACCAGTAAATGCGGATAAGCCTGTGCGGTGACGTTGTCATACGGGCTGTAGCTTTTCATGCACTCGTAATATTGCGGATCCTGCGGGTTACCCCACTCTTCAAACTCACCAGTGGTAAGAGGAATTGAt                                                                     <  1:1294385/140‑1 (MQ=255)

                                                               aaCCGGTCGTTACCAGTAAATGCGGATAAGCCTGTGCGGTGACGTTGTCATACGGGCTGTAGCTTTTCATGCACTCGTAATATTGCGGATCCTGCGGGTTACCCCACTCTTCAAACTCACCAGTGGTAAGAGGAATTGAt                                                                     <  1:1622252/140‑1 (MQ=255)

                                                                         tACCAGTAAATGCGGATAAGCCTGTGCGGTGACGTTGTCATACGGGCTGTAGCTTTTCATGCACTCGTAATATTGCGGATCCTGCGGGTTACCCCACTCTTCAAACTCACCAGTGGTAAGAGGAATTGATTCATCAAGCa                                                           <  1:1680089/140‑1 (MQ=255)

                                                                          aCCAGTAAATGCGGATAAGCCTGTGCGGTGACGTTGTCATACGGGCTGTAGCTTTTCATGCACTCGTAATATTGCGGATCCTGCGGGTTACCCCACTCTTCAAACTCACCAGTGGTAAGAGGAATTGATTCATCAAGCAt                                                          >  2:588871/1‑140 (MQ=255)

                                                                             aGTAAATGCGGATAAGCCTGTGCGGTGACGTTGTCATACGGGCTGTAGCTTTTCATGCACTCGTAATATTGCGGATCCTGCGGGTTACCCCACTCTTCAAACTCACCAGTGGTAAGAGGAATTGATTCATCAAGCATCgt                                                       <  2:268629/140‑1 (MQ=255)

                                                                               tAAATGCGGATAAGCCTGTGCGGTGACGTTGTCATACGGGCTGTAGCTTTTCATGCACTCGTAATATTGCGGATCCTGCGGGTTACCCCACTCTTCAAACTCACCAGTGGTAAGAGGAATTGATTCATCAAGCATCgttg                                                     >  1:1671599/1‑140 (MQ=255)

                                                                               tAAATGCGGATAAGCCTGTGCGGTGACGTTGTCATACGGGCTGTAGCTTTTCATGCACTCGTAATATTGCGGATCCTGCGGGTTACCCCACTCTTCAAACTCACCAGTGGTAAGAGGAATTGATTCATCAAGCATCgttg                                                     >  2:117400/1‑140 (MQ=255)

                                                                                   tGCGGATAAGCCTGTGCGGTGACGTTGTCATACGGGCTGTAGCTTTTCATGCACTCGTAATATTGCGGATCCTGCGGGTTACCCCACTCTTCAAACTCACCAGTGGTAAGAGGAATTGATTCATCAAGCATCGTTGTTac                                                 >  2:638572/1‑140 (MQ=255)

                                                                                         tAAGCCTGTGCGGTGACGTTGTCATACGGGCTGTAGCTTTTCATGCACTCGTAATATTGCGGATCCTGCGGGTTACCCCACTCTTCAAACTCACCAGTGGTAAGAGGAATTGATTCATCAAGCATCGTTGTTACAACATc                                           >  1:282272/1‑140 (MQ=255)

                                                                                            gCCTGTGCGGTGACGTTGTCATACGGGCTGTAGCTTTTCATGCACTCGTAATATTGCGGATCCTGCGGGTTACCCCACTCTTCAAACTCACCAGTGGTAAGAGGAATTGATTCATCAAGCATCGTTGTTACAACATcaac                                        >  2:1096463/1‑140 (MQ=255)

                                                                                               tgtgCGGTGACGTTGTCATACGGGCTGTAGCTTTTCATGCACTCGTAATATTGCGGATCCTGCGGGTTACCCCACTCTTCAAACTCACCAGTGGTAAGAGGAATTGATTCATCAAGCATCGTTGTTACAACATCAACaaa                                     <  2:667523/140‑1 (MQ=255)

                                                                                               tgtgCGGTGACGTTGTCATACGGGCTGTAGCTTTTCATGCACTCGTAATATTGCGGATCCTGCGGGTTACCCCACTCTTCAAACTCACCAGTGGTAAGAGGAATTGATTCATCAAGCATCGTTGTTACAACATCAACaaa                                     <  1:654200/140‑1 (MQ=255)

                                                                                               tgtgCGGTGACGTTGTCATACGGGCTGTAGCTTTTCATGCACTCGTAATATTGCGGATCCTGCGGGTTACCCCACTCTTCAAACTCACCAGTGGTAAGAGGAATTGATTCATCAAGCATCGTTGTTACAACATCAACaaa                                     <  1:526765/140‑1 (MQ=255)

                                                                                                   cGGTGACGTTGTCATACGGGCTGTAGCTTTTCATGCACTCGTAATATTGCGGATCCTGCGGGTTACCCCACTCTTCAAACTCACCAGTGGTAAGAGGAATTGATTCATCAAGCATCGTTGTTACAACATCAACAAACGGt                                 <  2:263385/140‑1 (MQ=255)

                                                                                                      tGACGTTGTCATACGGGCTGTAGCTTTTCATGCACTCGTAATATTGCGGTTCCTGCGGGTTACCCCACTCTTCAAACTCACCAGTGGTAAGAGGAATTGATTCATCAAGCATCGTTGTTacaaca                                             >  1:834908/1‑125 (MQ=255)

                                                                                                      tGACGTTGTCATACGGGCTGTAGCTTTTCATGCACTCGTAATATTGCGGTTCCTGCGGGTTACCCCACTCTTCAAACTCACCAGTGGTAAGAGGAATTGATTCATCAAGCATCGTTGTTacaaca                                             <  2:834908/125‑1 (MQ=255)

                                                                                                      tGACGTTGTCATACGGGCTGTAGCTTTTCATGCACTCGTAATATTGCGGATCCTGCGGGTTACCCCACTCTTCAAACTCACCAGTGGTAAGAGGAATTGATTCATCAAGCATCGTTGTTACAACATCAACAAACGGTAcc                              >  1:618846/1‑140 (MQ=255)

                                                                                                      tGACGTTGTCATACGGGCTGTAGCTTTTCATGCACTCGTAATATTGCGGATCCTGCGGGTTACCCCACTCTTCAAACTCACCAGTGGTAAGAGGAATTGATTCATCAAGCATCGTTGTTACAACATCAACAAACGGTAcc                              >  2:372598/1‑140 (MQ=255)

                                                                                                      tGACGTTGTCATACGGGCTGTAGCTTTTCATGCACTCGTAATATTGCGGATCCTGCGGGTTACCCCACTCTTCAAACTCACCAGTGGTAAGAGGAATTGATTCATCAAGCATCGTTGTTACAACATCAACAAACGGTAcc                              >  2:1620408/1‑140 (MQ=255)

                                                                                                      tGACGTTGTCATACGGGCTGTAGCTTTTCATGCACTCGTAATATTGCGGATCCTGCGGGTTACCCCACTCTTCAAACTCACCAGTGGTAAGAGGAATTGATTCATCAAGCATCGTTGTTACAACATCAACAAACGGTAcc                              >  2:668394/1‑140 (MQ=255)

                                                                                                           ttGTCATACGGGCTGTAGCTTTTCATGCACTCGTAATATTGCGGATCCTGCGGGTTACCCCACTCTTCAAACTCACCAGTGGTAAGAGGAATTGATTCATCAAGCATCGTTGTTACAACATCAACAAACGGTACCTGGGc                         >  1:917553/1‑140 (MQ=255)

                                                                                                                aTACGGGCTGTAGCTTTTCATGCACTCGTAATATTGCGGATCCTGCGGGTTACCCCACTCTTCAAACTCACCAGTGGTAAGAGGAATTGATTCATCAAGCATCGTTGTTACAACATCAACAAACGGTACCTGGGCGATaa                    <  1:668394/140‑1 (MQ=255)

                                                                                                                aTACGGGCTGTAGCTTTTCATGCACTCGTAATATTGCGGATCCTGCGGGTTACCCCACTCTTCAAACTCACCAGTGGTAAGAGGAATTGATTCATCAAGCATCGTTGTTACAACATCAACAAACGGTACCTGGGCGATaa                    <  2:917553/140‑1 (MQ=255)

                                                                                                                     ggCTGTAGCTTTTCATGCACTCGTAATATTGCGGATCCTGCGGGTTACCCCACTCTTCAAACTCACCAGTGGTAAGAGGAATTGATTCATCAAGCATCGTTGTTACAACATCAACAAACGGTACCTGGGCGATAACGCCg               <  1:971615/140‑1 (MQ=255)

                                                                                                                      gCTGTAGCTTTTCATGCACTCGTAATATTGCGGATCCTGCGGGTTACCCCACTCTTCAAACTCACCAGTGGTAAGAGGAATTGATTCATCAAGCATCGTTGTTACAACATCAACAAACGGTACCTGGGCGATAACGCCGt              >  1:30890/1‑140 (MQ=255)

                                                                                                                        tGTAGCTTTTCATGCACTCGTAATATTGCGGATCCTGCGGGTTACCCCACTCTTCAAACTCACCAGTGGTAAGAGGAATTGATTCATCAAGCATCGTTGTTACAACATCAACAAACGGTAcc                              >  2:1632229/1‑122 (MQ=255)

                                                                                                                        tGTAGCTTTTCATGCACTCGTAATATTGCGGATCCTGCGGGTTACCCCACTCTTCAAACTCACCAGTGGTAAGAGGAATTGATTCATCAAGCATCGTTGTTACAACATCAACAAACGGCACCTGGGCGATAACGCCGTgg            <  2:1212400/140‑1 (MQ=255)

                                                                                                                        tGTAGCTTCTCATGCACTCGTAATATTGCGGATCCTGCGGGTTACCCCACTCTTCAAACTCACCAGTGGTAAGAGGAATTGATTCATCAAGCATCGTTGTTACAACATCAACAAACGGTAcc                              <  1:1632229/122‑1 (MQ=255)

                                                                                                                            gCTTTTCATGCACTCGTAATATTGCGGATCCTGCGGGTTACCCCACTCTTCAAACTCACCAGTGGTAAGAGGAATTGATTCATCAAGCATCGTTGTTACAACATCAACAAACGGTACCTGGGCGATAACGCCGTGGaata        <  2:30890/140‑1 (MQ=255)

                                                                                                                                ttCATGCACTCGTAATATTGCGGATCCTGCGGGTTACCCCACTCTTCAAACTCACCAGTGGTAAGAGGAATTGATTCATCAAGCATCGTTGTTACAACATCAACAAACGGTACCTGGGCGATAACGCCGTGGAATAATTc    <  1:638572/140‑1 (MQ=255)

                                                                                                                                ttCATGCACTCGTAATATTGCGGATCCTGCGGGTTACCCCACTCTTCAAACTCACCAGTGGTAAGAGGAATTGATTCATCAAGCATCGTTGTTACAACATCAACAAACGGTACCTGGGCGATAACGCCGTGGAATAATTc    >  2:1432227/1‑140 (MQ=255)

                                                                                                                                ttCATGCACTCGTAATATTGCGGATCCTGCGGGTTACCCCACTCTTCAAACTCACCAGTGGTAAGAGGAATTGATTCATCAAGCATCGTTGTTACAACATCAACAAACGGTACCTGGGCGATAACGCCGTGGAATAATTc    >  2:1398488/1‑140 (MQ=255)

                                                                                                                                  cATGCACTCGTAATATTGCGGATCCTGCGGGTTACCCCACTCTTCAAACTCACCAGTGGTAAGAGGAATTGATTCATCAAGCATCGTTGTTACAACATCAACAAACGGTACCTGGGCGATAACGCCGTGGAATAATTCCg  >  1:1056404/1‑140 (MQ=255)

TCAGCTCGCGCAATTTAGCGACCCATTTTGCCGGTTCCCAATATTGCACCTGAGAATCGTGCAAACCGGTCGTTACCAGTAAATGCGGATAAGCCTGTGCGGTGACGTTGTCATACGGGCTGTAGCTTTTCATGTACTCGTAATATTGCGGATCCTGCGGGTTACCCCACTCTTCAAACTCACCAGTGGTAAGAGGAATTGATTCATCAAGCATCGTTGTTACAACATCAACAAACGGTACCTGGGCGATAACGCCGTGGAATAATTCCG  >  NC_000913/1926934‑1927203

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

N/A