Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A7 F28 I1 R1 183 98.6 3427438 96.9% 3321187 138.7

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 2,135,590 A→C G21G (GGT→GGG)  wzc ← protein‑tyrosine kinase Wzc

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,135,5900AC100.0% 456.1 / NA 121G21G (GGT→GGG) wzcprotein‑tyrosine kinase Wzc
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base C (58/63);  total (58/63)

Only 100 of 124 total aligned reads displayed.

CTCGATTTGTACCAGTGCGTCGGCACTATAAATCGGCGTGGCGAAGAAGGTGTAAACCACGGCACAGAGGGCGAATACGGTGGTGATGCCAATCACCCACCAGCGCGCTTCAATGACGGTGCCGACCAGGCGACCAATATCGATTTCATCACTGCCCGTTACCGGAGCGGCATGTTGTTTTACTTTTTCTGTCATTCTTATACCTGCTCTGCGTTCAATGCCTGCGCCCACTGGCGGGCAGACCGTTCAAGTAATGTGTACACCGCTGC  >  NC_000913/2135458‑2135726
                                                                                                                                    |                                                                                                                                        
cTCGATTTGTACCAGTGCGTCGGCACTATAAATCGGCGTGGCGAAGAAGGTGTAAACCACGGCACAGAGGGCGAATACGGTGGTGATGCCAATCACCCACCAGCGCGCTTCAATGACGGTGCCGACCAGGCGCCCAatat                                                                                                                                   >  1:1079449/1‑140 (MQ=255)
 tCGATTTGTACCAGTGCGTCGGCACTATAAATCGGCGTGGCGAAGAAGGTGTAAACCACGGCACAGAGGGCGAATACGGTGGTGATGCCAATCACCCACCAGCGCGCTTCAATGACGGTGCCGACCAGGCGCCCAATATc                                                                                                                                  <  2:1222295/140‑1 (MQ=255)
         tACCAGTGCGTCGGCACTATAAATCGGCGTGGCGAAGAAGGTGTAAACCACGGCACAGAGGGCGAATACGGTGGTGATGCCAATCACCCACCAGCGCGCTTCAATGACGGTGCCGACCAGGCGCCCAATATCGATTtcat                                                                                                                          <  1:134529/140‑1 (MQ=255)
           ccAGTGCGTCGGCACTATAAATCGGCGTGGCGAAGAAGGTGTAAACCACGGCACAGAGGGCGAATACGGTGGTGATGCCAATCACCCACCAGCGCGCTTCAATGACGGTGCCGACCAGGCGCCCAATATCGATTtcatca                                                                                                                        <  2:974527/140‑1 (MQ=255)
              gTGCGTCGGCACTATAAATCGGCGTGGCGAAGAAGGTGTAAACCACGGCACAGAGGGCGAATACGGTGGTGATGCCAATCACCCACCAGCGCGCTTCAATGACGGTGCCGACCAGGCGCCCAATATCGATTTCATCACTg                                                                                                                     <  2:1289913/140‑1 (MQ=255)
               tGCGTCGGCACTATAAATCGGCGTGGCGAAGAAGGTGTAAACCACGGCACAGAGGGCGAATACGGTGGTGATGCCAATCACCCACCAGCGCGCTTCAATGACGGTGCCGACCAGGCGCCCAATATCGATTTCATCAc                                                                                                                       <  1:43992/137‑1 (MQ=255)
               tGCGTCGGCACTATAAATCGGCGTGGCGAAGAAGGTGTAAACCACGGCACAGAGGGCGAATACGGTGGTGATGCCAATCACCCACCAGCGCGCTTCAATGACGGTGCCGACCAGGCGCCCAATATCGATTTCATCAc                                                                                                                       >  2:43992/1‑137 (MQ=255)
               tGCGTCGGCACTATAAATCGGCGTGGCGAAGAAGGTGTAAACCACGGCACAGAGGGCGAATACGGTGGTGATGCCAATCACCCACCAGCGCGCTTCAATGACGGTGCCGACCAGGCGCCCAATATCGATTTCATCACTGc                                                                                                                    >  1:624086/1‑140 (MQ=255)
               tGCGTCGGCACTATAAATCGGCGTGGCGAAGAAGGTGTAAACCACGGCACAGAGGGCGAATACGGTGGTGATGCCAATCACCCACCAGCGCGCTTCAATGACGGTGCCGACCAGGCGCCCAATATCGATTTCATCACTGc                                                                                                                    >  2:87293/1‑140 (MQ=255)
               tGCGTCGGCACTATAAATCGGCGTGGCGAAGAAGGTGTAAACCACGGCACAGAGGGCGAATACGGTGGTGATGCCAATCACCCACCAGCGCGCTTCAATGACGGTGCCGACCAGGCGCCCAATATCGATTTCATCACTGc                                                                                                                    >  1:1233198/1‑140 (MQ=255)
                 cGTCGGCACTATAAATCGGCGTGGCGAAGAAGGTGTAAACCACGGCACAGAGGGCGAATACGGTGGTGATGCCAATCACCCACCAGTGCGCTTCAATGACGGTGCCGACCAGGCGCCCAATATCGATTTCATCACTGccc                                                                                                                  >  2:1560400/1‑140 (MQ=255)
                 cGTCGGCACTATAAATCGGCGTGGCGAAGAAGGTGTAAACCACGGCACAGAGGGCGAATACGGTGGTGATGCCAATCACCCACCAGCGCGCTTCAATGACGGTGCCGACCAGGCGCCCAATATCGATTTCATCACTGccc                                                                                                                  >  2:493408/1‑140 (MQ=255)
                   tCGGCACTATAAATCGGCGTGGCGAAGAAGGTGTAAACCACGGCACAGAGGGCGAATACGGTGGTGATGCCAATCACCCACCAGCGCGCTTCAATGACGGTGCCGACCAGGCGCCCAATATCGATTTCATCACTGCCCGt                                                                                                                >  2:1449289/1‑140 (MQ=255)
                         cTATAAATCGGCGTGGCGAAGAAGGTGTAAACCACGGCACAGAGGGCGAATACGGTGGTGATGCCAATCACCCACCAGCGCGCTTCAATGACGGTGCCGACCAGGCGCCCAATATCGATTTCATCACTGCCCGTTACCgg                                                                                                          >  2:1403047/1‑140 (MQ=255)
                          tataAATCGGCGTGGCGAAGAAGGTGTAAACCACGGCACAGAGGGCGAATACGGTGGTGATGCCAATCACCCACCAGCGCGCTTCAATGACGGTGCCGACCAGGCGCCCAATATCGATTTCATCACTGCCCGTTACCGGa                                                                                                         <  2:144386/140‑1 (MQ=255)
                           ataAATCGGCGTGGCGAAGAAGGTGTAAACCACGGCACAGAGGGCGAATACGGTGGTGATGCCAATCACCCACCAGCGCGCTTCAATGACGGTGCCGACCAGGCGCCCAATATCGATTTCATCACTGCCCGTTACCGGAg                                                                                                        >  1:1353979/1‑140 (MQ=255)
                             aaaTCGGCGTGGCGAAGAAGGTGTAAACCACGGCACAGAGGGCGAATACGGTGGTGATGCCAATCACCCACCAGCGCGCTTCAATGACGGTGCCGACCAGGCGCCCAATATCGATTTCATCACTGCCCGTTACCGGAGCg                                                                                                      <  2:1485753/140‑1 (MQ=255)
                                tCGGCGTGGCGAAGAAGGTGTAAACCACGGCACAGAGGGCGAATACGGTGGTGATGCCAATCACCCACCAGCGCGCTTCAATGACGGTGCCGACCAGGCGCCCAATATCGATTTCATCACTGCCCGTTACCGGAGCGGCa                                                                                                   <  1:506954/140‑1 (MQ=255)
                                    cGTGGCGAAGAAGGTGTAAACCACGGCACAGAGGGCGAATACGGTGGTGATGCCAATCACCCACCAGCGCGCTTCAATGACGGTGCCGACCAGGCGCCCAATATCGATTTCATCACTGCCCGTTACCGGAGCGGCAtgtt                                                                                               >  1:1665742/1‑140 (MQ=255)
                                    cGTGGCGAAGAAGGTGTAAACCACGGCACAGAGGGCGAATACGGTGGTGATGCCAATCACCCACCAGCGCGCTTCAATGACGGTGCCGACCAGGCGCCCAATATCGATTTCATCACTGCCCGTTACCGGAGCGGCAtgtt                                                                                               >  2:626346/1‑140 (MQ=255)
                                    cGTGGCGAAGAAGGTGTAAACCACGGCACAGAGGGCGAATACGGTGGTGATGCCAATCACCCACCAGCGCGCTTCAATGACGGTGCCGACCAGGCGCCCAATATCGATTTCATCACTGCCCGTTACCGGAGCGGCAtgtt                                                                                               >  2:1554751/1‑140 (MQ=255)
                                        gCGAAGAAGGTGTAAACCACGGCACAGAGGGCGAATACGGTGGTGATGCCAATCACCCACCAGCGCGCTTCAATGACGGTGCCGACCAGGCGCCCAATATCGATTTCATCACTGCCCGTTACCGGAGCGGCATGTTGttt                                                                                           >  2:493526/1‑140 (MQ=255)
                                             gaagGTGTAAACCACGGCACAGAGGGCGAATACGGTGGTGATGCCAATCACCCACCAGCGCGCTTCAATGACGGTGCCGACCAGGCGCCCAATATCGATTTCATCACTGCCCGTTACCGGAGCGGCATGTTGTTTTACtt                                                                                      >  1:1188261/1‑140 (MQ=255)
                                                ggTGTAAACCACGGCACAGAGGGCGAATACGGTGGTGATGCCAATCACCCACCAGCGCGCTTCAATGACGGTGCCGACCAGGCGCCCAATATCGATTTCATCACTGCCCGTTACCGGAGCGGCATGTTGTTTTACttttt                                                                                   >  1:392511/1‑140 (MQ=255)
                                                    tAAACCACGGCACAGAGGGCGAATACGGTGGTGATGCCAATCACCCACCAGCGCGCTTCAATGACGGTGCCGACCAGGCGCCCAATATCGATTTCATCACTGCCCGTTACCGGAGCGGTATGTTGTTTTACTTTTTCTGt                                                                               <  2:1213161/140‑1 (MQ=255)
                                                     aaaCCACGGCACAGAGGGCGAATACGGTGGTGATGCCAATCACCCACCAGCGCGCTTCAATGACGGTGCCGACCAGGCGCCCAATATCGATTTCATCACTGCCCGTTACCGGAGCGGCATGTTGTTTTACTTTTTCTGTc                                                                              <  1:1038220/140‑1 (MQ=255)
                                                     aaaCCACGGCACAGAGGGCGAATACGGTGGTGATGCCAATCACCCACCAGCGCGCTTCAATGACGGTGCCGACCAGGCGCCCAATATCGATTTCATCACTGCCCGTTACCGGAGCGGCATGTTGTTTTACTTTTTCTGTc                                                                              <  1:5710/140‑1 (MQ=255)
                                                     aaaCCACGGCACAGAGGGCGAATACGGTGGTGATGCCAATCACCCACCAGCGCGCTTCAATGACGGTGCCGACCAGGCGCCCAATATCGATTTCATCACTGCCCGTTACCGGAGCGGCATGTTGTTTTACTTTTTCTGTc                                                                              <  1:990826/140‑1 (MQ=255)
                                                     aaaCCACGGCACAGAGGGCGAATACGGTGGTGATGCCAATCACCCACCAGCGCGCTTCAATGACGGTGCCGACCAGGCGCCCAATATCGATTTCATCACTGCCCGTTACCGGAGCGGCATGTTGTTTTACTTTTTCTGTc                                                                              <  1:1006825/140‑1 (MQ=255)
                                                     aaaCCACGGCACAGAGGGCGAATACGGTGGTGATGCCAATCACCCACCAGCGCGCTTCAATGACGGTGCCGACCAGGCGCCCAATATCGATTTCATCACTGCCCGTTACCGGAGCGGCATGTTGTTTTACTTTTTCTGTc                                                                              <  1:493408/140‑1 (MQ=255)
                                                     aaaCCACGGCACAGAGGGCGAATACGGTGGTGATGCCAATCACCCACCAGCGCGCTTCAATGACGGTGCCGACCAGGCGCCCAATATCGATTTCATCACTGCCCGTTACCGGAGCGGCATGTTGTTTTACTTTTTCTGTc                                                                              <  1:626346/140‑1 (MQ=255)
                                                      aaCCACGGCACAGAGGGCGAATACGGTGGTGATGCCAATCACCCACCAGCGCGCTTCAATGACGGTGCCGACCAGGCGCCCAATATCGATTTCATCACTGCCCGTTACCGGAGCGGCATGTTGTTTTACTTTTTCTGTCa                                                                             <  1:454386/140‑1 (MQ=255)
                                                       aCCACGGCACAGAGGGCGAATACGGTGGTGATGCCAATCACCCACCAGCGCGCTTCAATGACGGTGCCGACCAGGCGCCCAATATCGATTTCATCACTGCCCGTTACCGGAGCGGCATGTTGTTTTACTTTTTCTGTCAt                                                                            >  2:507855/1‑140 (MQ=255)
                                                          aCGGCACAGAGGGCGAATACGGTGGTGATGCCAATCACCCACCAGCGCGCTTCAATGACGGTGCCGACCAGGCGCCCAATATCGATTTCATCACTGCCCGTTACCGGAGCGGCATGTTGTTTTACTTTTTCTGTCATTCt                                                                         >  1:1212821/1‑140 (MQ=255)
                                                           cGGCACAGAGGGCGAATACGGTGGTGATGCCAATCACCCACCAGCGCGCTTCAATGACGGTGCCGACCAGGCGCCCAATATCGATTTCATCACTGCCCGTTACCGGAGCGGCATGTTGTTTTACTTTTTCTGt                                                                               >  2:88896/1‑133 (MQ=255)
                                                           cGGCACAGAGGGCGAATACGGTGGTGATGCCAATCACCCACCAGCGCGCTTCAATGACGGTGCCGACCAGGCGCCCAATATCGATTTCATCACTGCCCGTTACCGGAGCGGCATGTTGTTTTACTTTTTCTGt                                                                               <  1:85791/133‑1 (MQ=255)
                                                           cGGCACAGAGGGCGAATACGGTGGTGATGCCAATCACCCACCAGCGCGCTTCAATGACGGTGCCGACCAGGCGCCCAATATCGATTTCATCACTGCCCGTTACCGGAGCGGCATGTTGTTTTACTTTTTCTGt                                                                               <  1:88896/133‑1 (MQ=255)
                                                           cGGCACAGAGGGCGAATACGGTGGTGATGCCAATCACCCACCAGCGCGCTTCAATGACGGTGCCGACCAGGCGCCCAATATCGATTTCATCACTGCCCGTTACCGGAGCGGCATGTTGTTTTACTTTTTCTGt                                                                               >  2:85791/1‑133 (MQ=255)
                                                           cGGCACAGAGGGCGAATACGGTGGTGATGCCAATCACCCACCAGCGCGCTTCAATGACGGTGCCGACCAGGCGCCCAATATCGATTTCATCACTGCCCGTTACCGGAGCGGCATGTTGTTTTACTTTTTCTGTc                                                                              >  1:557190/1‑134 (MQ=255)
                                                           cGGCACAGAGGGCGAATACGGTGGTGATGCCAATCACCCACCAGCGCGCTTCAATGACGGTGCCGACCAGGCGCCCAATATCGATTTCATCACTGCCCGTTACCGGAGCGGCATGTTGTTTTACTTTTTCTGTCATTCtt                                                                        >  1:924804/1‑140 (MQ=255)
                                                           cGGCACAGAGGGCGAATACGGTGGTGATGCCAATCACCCACCAGCGCGCTTCAATGACGGTGCCGACCAGGCGCCCAATATCGATTTCATCACTGCCCGTTACCGGAGCGGCATGTTGTTTTACTTTTTCTGTCATTCtt                                                                        >  1:553787/1‑140 (MQ=255)
                                                           cGGCACAGAGGGCGAAAACGGGGGGGATGCCAATCACCCACCCGCGCGCTTCAATGACGGTGCCGACCAGGCGCCCAATATCGATTTCATCACTGCCCGTTACCGGGGCGGGATGGTGTTTTTCTTTTTTTTTCATTCtt                                                                        >  2:720698/1‑140 (MQ=255)
                                                            ggCACAGAGGGCGAATACGGTGGTGATGCCAATCACCCACCAGCGCGCTTCAATGACGGTGCCGACCAGGCGCCCAATATCGATTTCATCACTGCCCGTTACCGGAGCGGCATGTTGTTTTACTTTTTCTGTCATTCt                                                                         >  1:1042246/1‑138 (MQ=255)
                                                            ggCACAGAGGGCGAATACGGTGGTGATGCCAATCACCCACCAGCGCGCTTCAATGACGGTGCCGACCAGGCGCCCAATATCGATTTCATCACTGCCCGTTACCGGAGCGGCATGTTGTTTTACTTTTTCTGTCATTCt                                                                         <  2:1042246/138‑1 (MQ=255)
                                                            ggCACAGAGGGCGAATACGGTGGTGATGCCAATCACCCACCAGCGCGCTTCAATGACGGTGCCGACCAGGCGCCCAATATCGATTTCATCACTGCCCGTTACCGGAGCGGCATGTTGTTTTACTTTTTCTGTCATTCTta                                                                       >  1:426992/1‑140 (MQ=255)
                                                            ggCACAGAGGGCGAATACGGTGGTGATGCCAATCACCCACCAGCGCGCTTCAATGACGGTGCCGACCAGGCGCCCAATATCGATTTCATCACTGCCCGTTACCGGAGCGGCATGTTGTTTTACTTTTTCTGTCATTCTta                                                                       >  2:1710126/1‑140 (MQ=255)
                                                                   agGGCGAATACGGTGGTGATGCCAATCACCCACCAGCGCGCTTCAATGACGGTGCCGACCAGGCGCCCAATATCGATTTCATCACTGCCCGTTACCGGAGCGGCATGTTGTTTTACTTTTTCTGTCATTCTTATACCTGc                                                                <  2:392511/140‑1 (MQ=255)
                                                                     ggCGAATACGGTGGTGATGCCAATCACCCACCAGCGCGCTTCAATGACGGTGCCGACCAGGCGCCCAATATCGATTTCATCACTGCCCGTTACCGGAGCGGCATGTTGTTTTACTTTTTCTGTCATTCTTATACCTGctc                                                              >  2:447395/1‑140 (MQ=255)
                                                                        gAATACGGTGGTGATGCCAATCACCCACCAGCGCGCTTCAATGACGGTGCCGACCAGGCGCCCAATATCGATTTCATCACTGCCCGTTACCGGAGCGGCATGTTGTTTTACTTTTTCTGTCATTCTTATACCTGCTCTGc                                                           >  1:113306/1‑140 (MQ=255)
                                                                         aaTACGGTGGTGATGCCAATCACCCACCAGCGCGCTTCAATGACGGTGCCGACCAGGCGCCCAATATCGATTTCATCACTGCCCGTTACCGGAGCGGCATGTTGTTTTACTTTTTCTGTCATTCTTATACCTGCTCTg                                                            <  1:1259309/138‑1 (MQ=255)
                                                                         aaTACGGTGGTGATGCCAATCACCCACCAGCGCGCTTCAATGACGGTGCCGACCAGGCGCCCAATATCGATTTCATCACTGCCCGTTACCGGAGCGGCATGTTGTTTTACTTTTTCTGTCATTCTTATACCTGCTCTg                                                            >  2:1259309/1‑138 (MQ=255)
                                                                              ggtggtGATGCCAATCACCCACCAGCGCGCTTCAATGACGGTGCCGACCAGGCGCCCAATATCGATTTCATCACTGCCCGTTACCGGAGCGGCATGTTGTTTTACTTTTTCTGTCATTCTTATACCTGCTCTGCGTTCaa                                                     >  1:1162856/1‑140 (MQ=255)
                                                                               gtggtgATGCCAATCACCCACCAGCGCGCTTCAATGACGGTGCCGACCAGGCGCCCAATATCGATTTCATCACTGCCCGTTACCGGAGCGGCATGTTGTTTTACTTTTTCTGTCATTCTTATACCTGCTCTGCGTTCAAt                                                    >  2:27926/1‑140 (MQ=255)
                                                                                 ggtgATGCCAATCACCCACCAGCGCGCTTCAATGACGGTGCCGACCAGGCGCCCAATATCGATTTCATCACTGCCCGTTACCGGAGCGGCATGTTGTTTTACTTTTTCTGTCATTCTTATACCTGCTCTGCGTTCAATGc                                                  >  1:554414/1‑140 (MQ=255)
                                                                                  gtgATGCCAATCACCCACCAGCGCGCTTCAATGACGGTGCCGACCAGGCGCCCAATATCGATTTCATCACTGCCCGTTACCGGAGCGGCATGTTGTTTTACTTTTTCTGTCATTCTTATACCTGctct                                                             <  1:1540942/128‑1 (MQ=255)
                                                                                  gtgATGCCAATCACCCACCAGCGCGCTTCAATGACGGTGCCGACCAGGCGCCCAATATCGATTTCATCACTGCCCGTTACCGGAGCGGCATGTTGTTTTACTTTTTCTGTCATTCTTATACCTGctct                                                             >  2:1540942/1‑128 (MQ=255)
                                                                                  gtgATGCCAATCACCCACCAGCGCGCTTCAATGACGGTGCCGACCAGGCGCCCAATATCGATTTCATCACTGCCCGTTACCGGAGCGGCATGTTGTTTTACTTTTTCTGTCATTCTTATACCTGCTCTGCGTTCAATGcc                                                 >  2:130270/1‑140 (MQ=255)
                                                                                  gtgATGCCAATCACCCACCAGCGCGCTTCAATGACGGTGCCGACCAGGCGCCCAATATCGATTTCATCACTGCCCGTTACCGGAGCGGCATGTTGTTTTAC‑TTTTCTGTCATTCTTATACCTGCTCTGCGTTCAATGCCt                                                <  1:87293/140‑1 (MQ=255)
                                                                                   tgATGCCAATCACCCACCAGCGCGCTTCAATGACGGTGCCGACCAGGCGCCCAATATCGATTTCATCACTGCCCGTTACCGGAGCGGCATGTTGTTTTACTTTTTCTGTCATTCTTATACCTGCTCTGCGTTCAATGCCt                                                >  1:581625/1‑140 (MQ=255)
                                                                                   tgATGCCAATCACCCACCAGCGCGCTTCAATGACGGTGCCGACCAGGCGCCCAATATCGATTTCATCACTGCCCGTTACCGGAGCGGCATGTTGTTTTACTTTTTCTGTCATTCTTATACCTGCTCTGCGTTCAATGCCt                                                >  2:139159/1‑140 (MQ=255)
                                                                                   tgATGCCAATCACCCACCAGCGCGCTTCAATGACGGTGCCGACCAGGCGCCCAATATCGATTTCATCACTGCCCGTTACCGGAGCGGCATGTTGTTTTACTTTTTCTGTCATTCCTATACCTGCTCTGCGTTCAATGCCt                                                >  1:1658828/1‑140 (MQ=255)
                                                                                     aTGCCAATCACCCACCAGCGCGCTTCAATGACGGTGCCGACCAGGCGCCCAATATCGATTTCATCACTGCCCGTTACCGGAGCGGCATGTTGTTTTACTTTTTCTGTCATTCTTATACCTGCTCTGCGTTCAATGCCTgc                                              >  1:1412454/1‑140 (MQ=255)
                                                                                     aTGCCAATCACCCACCAGCGCGCTTCAATGACGGTGCCGACCAGGCGCCCAATATCGATTTCATCACTGCCCGTTACCGGAGCGGCATGTTGTTTTACTTTTTCTGTCATTCTTATACCTGCTCTGCGTTCAATGCCTgc                                              >  2:77094/1‑140 (MQ=255)
                                                                                     aTGCCAATCACCCACCAGCGCGCTTCAATGACGGTGCCGACCAGGCGCCCAATATCGATTTCATCACTGCCCGTTACCGGAGCGGCATGTTGTTTTACTTTTTCTGTCATTCTTATACCTGCTCTGCGTTCAATGCCTgc                                              >  2:1374361/1‑140 (MQ=255)
                                                                                          aaTCACTCACCAGCGCGCTTCAATGACGGTGCCGACCAGGCGCCCAATATCGATTTCATCACTGCCCGTTACCGGAGCGGCATGTTGTTTTACTTTTTCTGTCATTCTTATACCTGCTCTGCGTTCAATGCCTGCGCCCa                                         >  1:744752/1‑140 (MQ=255)
                                                                                            tCACCCACCAGCGCGCTTCAATGACGGTGCCTACCAGGCGCCCAATATCGATTTCATCACTGCCCGTTACCGGAGCGGCATGTTGTTTTACTTTTTCTGTCATTCTTATACCTGCTCTGCGTTCAATGCCTGCGCCCACt                                       >  1:231787/1‑140 (MQ=255)
                                                                                            tCACCCACCAGCGCGCTTCAATGACGGTGCCGACCAGGCGCCCAATATCGATTTCATCACTGCCCGTTACCGGAGCGGCATGTTGTTTTACTTTTTCTGTCATTCTTATACCTGCTCTGCGTTCAATGCCTGCGCCCACt                                       <  2:924804/140‑1 (MQ=255)
                                                                                            tCACCCACCAGCGCGCTTCAATGACGGTGCCGACCAGGCGCCCAATATCGATTTCATCACTGCCCGTTACCGGAGCGGCATGATGTTTTACTTTTTCTGTCATTCTTATACCTGCTCTGCGTTCAATGc                                                  >  2:1204296/1‑129 (MQ=255)
                                                                                                  accaGCGCGCTTCAATGACGGTGCCGACCAGGCGCCCAATATCGATTTCATCACTGCCCGTTACCGGAGCGGCATGTTGTTTTACTTTTTCTGTCATTCTTATACCTGCTCTGCGTTCAATGCCTGCGCCCACTgg                                     >  2:1550317/1‑136 (MQ=255)
                                                                                                  accaGCGCGCTTCAATGACGGTGCCGACCAGGCGCCCAATATCGATTTCATCACTGCCCGTTACCGGAGCGGCATGTTGTTTTACTTTTTCTGTCATTCTTATACCTGCTCTGCGTTCAATGCCTGCGCCCACTgg                                     <  1:1550317/136‑1 (MQ=255)
                                                                                                  accaGCGCGCTTCAATGACGGTGCCGACCAGGCGCCCAATATCGATTTCATCACTGCCCGTTACCGGAGCGGCATGTTGTTTTACTTTTTCTGTCATTCTTATACCTGCTCTGCGTTCAATGCCTGCGCCCACTGGCggg                                 <  1:1710126/140‑1 (MQ=255)
                                                                                                     aGCGCGCTTCAATGACGGTGCCGACCAGGCGCCCAATATCGATTTCATCACTGCCCGTTACCGGAGCGGCATGTTGTTTTACTTTTTCTGTCATTCTTATACCTGCTCTGCGTTCAATGCCTGCGCCCACTGGCGGGCAg                              <  2:754938/140‑1 (MQ=255)
                                                                                                     aGCGCGCTTCAATGACGGTGCCGACCAGGCGCCCAATATCGATTTCATCACTGCCCGTTACCGGAGCGGCATGTTGTTTTACTTTTTCTGTCATTCTTATACCTGCTCTGCGTTCAATGCCTGCGCCCACTGGCGGGCAg                              <  1:77094/140‑1 (MQ=255)
                                                                                                     aGCGCGCTTCAATGACGGTGCCGACCAGGCGCCCAATATCGATTTCATCACTGCCCGTTACCGGAGCGGCATGTTGTTTTACTTTTTCTGTCATTCTTATACCTGCTCTGCGTTCAATGCCTGCGCCCACTGGCGGGCAg                              <  2:426992/140‑1 (MQ=255)
                                                                                                       cgcgcTTCAATGACGGTGCCGACCAGGCGCCCAATATCGATTTCATCACTGCCCGTTACCGGAGCGGCATGTTGTTTTACTTTTTCTGTCATTCTTATACCTGCTCTGCGTTCAATGCCTGCGCCCACTGGCGGGCAGAc                            <  2:581625/140‑1 (MQ=255)
                                                                                                       cgcgcTTCAATGACGGTGCCGACCAGGCGCCCAATATCGATTTCATCACTGCCCGTTACCGGAGCGGCATGTTGTTTTACTTTTTCTGTCATTCTTATACCTGCTCTGCGTTCAATGCCTGCGCCCACTGGCGGGCAGAc                            <  1:507855/140‑1 (MQ=255)
                                                                                                         cgcTTCAATGACGGTGCCGACCAGGCGCCCAATATCGATTTCATCACTGCCCGTTACCGGAGCGGCATGTTGTTTTACTTTTTCTGTCATTCTTATACCTGCTCTGCGTTCAATGCCTGCGCCCACTGGCGGGCAGACCg                          <  2:178924/140‑1 (MQ=255)
                                                                                                          gcTTCAATGACGGTGCCGACCAGGCGCCCAATATCGATTTCATCACTGCCCGTTACCGGAGCGGCATGTTGTTTTACTTTTTCTGTCATTCTTATACCTGCTCTGCGTTCAATGCCTGCGCCCACTGGCGGGCAGACCGt                         >  1:941871/1‑140 (MQ=255)
                                                                                                            ttCAATGACGGTGCCGACCAGGCGCCCAATATCGATTTCATCACTGCCCGTTACCGGAGCGGCATGTTGTTTTACTTTTTCTGTCATTCTTATACCTGCTCTGCGTTCAATGCCTGCGCCCACTGGCGGGCAGACCGTTc                       <  1:1374361/140‑1 (MQ=255)
                                                                                                            ttCAATGACGGTGCCGACCAGGCGCCCAATATCGATTTCATCACTGCCCGTTACCGGAGCGGCATGTTGTTTTACTTTTTCTGTCATTCTTATACCTGCTCTGCGTTCAATGCCTGCGCCCACTGGCGGGCAGACCGTTc                       <  1:130270/140‑1 (MQ=255)
                                                                                                              gacagACGGTGCCGACCAGGCGCCCAATATCGATTTCATCACTGCCCGTTACCGGAGCGGCATGTTGTTTTACTTTTTCTGTCATTCTTATACCTGCTCTGCGTTCAATGCCTGCGCCCACTGGCGGGCAGACCGTTCaa                     <  1:1012196/136‑1 (MQ=255)
                                                                                                              cAATGACGGTGCCTACCAGGCGCCCAATATCGATTTCATCACTGCCCGTTACCGGAGCGGCATGTTGTTTTACTTTTTCTGTCATTCTTATACCTGCTCTGCGTTCAATGCCTGCGCCCACTGGCGGGCAGACCGTTCaa                     <  2:231787/140‑1 (MQ=255)
                                                                                                              cAATGACGGTGCCGACCAGGCGCCCAATATCGATTTCATCACTGCCCGTTACCGGAGCGGCATGTTGTTTTACTTTTTCTGTCATTCTTATACCTGCTCTGCGTTCAATGCCTGCGCCCACTGGCGGGCAGACCGTTCaa                     <  2:624086/140‑1 (MQ=255)
                                                                                                              cAATGACGGTGCCGACCAGGCGCCCAATATCGATTTCATCACCGCCCGTTACCGGAGCGGCATGTTGTTTTACTTTTTCTGTCATTCTTATACCTGCTCTGCGTTCAATGCCTGCGCCCACTGGCGGGCAGACCGTTCaa                     <  2:1284541/140‑1 (MQ=255)
                                                                                                                aTGACGGTGCCGACCAGGCGCCCAATATCGATTTCATCACTGCCCGTTACCGGAGCGGCATGTTGTTTTACTTTTTCTGTCATTCTTATACCTGCTCTGCGTTCAATGCCTGCGCCCACTGGCGGGCAGACCGTTCAAGt                   <  1:1560400/140‑1 (MQ=255)
                                                                                                                aTGACGGTGCCGACCAGGCGCCCAATATCGATTTCATCACTGCCCGTTACCGGAGCGGCATGTTGTTTTACTTTTTCTGTCATTCTTATACCTGCTCTGCGTTCAATGCCTGCGCCCACTGGCGGGCAGACCGTTCAAGt                   <  2:1369681/140‑1 (MQ=255)
                                                                                                                aTGACGGTGCCGACCAGGCGCCCAATATCGATTTCATCACTGCCCGTTACCGGAGCGGCATGTTGTTTTACTTTTTCTGTCATTCTTATACCTGCTCTGCGTTCAATGCCTGCGCCCACTGGCGGGCAGACCGTTCAAGt                   <  1:374203/140‑1 (MQ=255)
                                                                                                                aTGACGGTGCCGACCAGGCGCCCAATATCGATTTCATCACTGCCCGTTACCGGAGCGGCATGTTGTTTTACTTTTTCTGTCATTCTTATACCTGCTCTGCGTTCAATGCCTGCGCCCACTGGCGGGCAGACCGTTCAAGt                   <  2:1162856/140‑1 (MQ=255)
                                                                                                                 tGACGGTGCCGACCAGGCGCCCAATATCGATTTCATCACTGCCCGTTACCGGAGCGGCATGTTGTTTTACTTTTTCTGTCATTCTTATACCTGCTCTGCGTTCAATGCCTGCGCCCACTGGCGGGCAGACCGTTCAAGTa                  <  2:554414/140‑1 (MQ=255)
                                                                                                                 tGACGGTGCCGACCAGGCGCCCAATATCGATTTCATCACTGCCCGTTACCGGAGCGGCATGTTGTTTTACTTTTTCTGTCATTCTTATACCTGCTCTGCGTTCAATGCCTGCGCCCACTGGCGGGCAGACCGTTCAAGTa                  <  1:1403047/140‑1 (MQ=255)
                                                                                                                 tGACGGTGCCGACCAGGCGCCCAATATCGATTTCATCACTGCCCGTTACCGGAGCGGCATGTTGTTTTACTTTTTCTGTCATTCTTATACCTGCTCTGCGTTCAATGCCTGCGCCCACTGGCGGGCAGACCGTTCAAGTa                  <  1:1449289/140‑1 (MQ=255)
                                                                                                                 tGACGGTGCCGACCAGGCGCCCAATATCGATTTCATCACTGCCCGTTACCGGAGCGGCATGTTGTTTTACTTTTTCTGTCATTCTTATACCTGCTCTGCGTTCAATGCCTGCGCCCACTGGCGGGCAGACCGTTCAAGTa                  <  2:776697/140‑1 (MQ=255)
                                                                                                                 tGACGGTGCCGACCAGGCGCCCAATATCGATTTCATCACTGCCCGTTACCGGAGCGGCATGTTGTTTTACTTTTTCTGTCATTCTTATACCTGCTCTGCGTTCAATGCCTGCGCCCACTGGCGGGCAGACCGTTCAAGTa                  <  2:253663/140‑1 (MQ=255)
                                                                                                                    cGGTGCCGACCAGGCGCCCAATATCGATTTCATCACTGCCCGTTACCGGAGCGGCATGTTGTTTTACTTTTTCTGTCATTCTTATACCTGCTCTGCGTTCAATGCCTGCGCCCACTGGCGGGCAGACCGTTCaa                     <  2:1485712/134‑1 (MQ=255)
                                                                                                                    cGGTGCCGACCAGGCGCCCAATATCGATTTCATCACTGCCCGTTACCGGAGCGGCATGTTGTTTTACTTTTTCTGTCATTCTTATACCTGCTCTGCGTTCAATGCCTGCGCCCACTGGCGGGCAGACCGTTCaa                     >  1:1485712/1‑134 (MQ=255)
                                                                                                                            aCCAGGCGCCCAATATCGATTTCATCACTGCCCGTTACCGGAGCGGCATGTTGTTTTACTTTTTCTGTCATTCTTATACCTGCTCTGCGTTCAATGCCTGCGCCCACTGGCGGGCAGACCGTTTAAGTAAAGTGTACAcc       >  1:1251828/1‑140 (MQ=255)
                                                                                                                            aCCAGGCGCCCAATATCGATTTCATCACTGCCCGTTACCGGAGCGGCATGTTGTTTTACTTTTTCTGTCATTCTTATACCTGCTCTGCGTTCAATGCCTGCGCCCACTGGCGGGCAGACCGTTCAAGTAATGTGTACAcc       >  1:1048729/1‑140 (MQ=255)
                                                                                                                              cAGGCGCCCAATATCGATTTCATCACTGCCCGTTACCGGAGCGGCATGTTGTTTTACTTTTTCTGTCATTCTTATACCTGCTCTGCGTTCAATGCCTGCGCCCACTGGCGGTCAAACCCGTCAAGTAATGTGTacctgtc     >  2:1012196/1‑135 (MQ=255)
                                                                                                                                 gcgcCCAATATCGATTTCATCACTGCCCGTTACCGGAGCGGCATGTTGTTTTACTTTTTCTGTCATTCTTATACCTGCTCTGCGTTCAATGCCTGCGCCCACTGGCGGGCAGACCGTTCAAGTAATGTGTACACCGCTGc  >  1:1290059/1‑140 (MQ=255)
                                                                                                                                 gcgcCCAATATCGATTTCATCACTGCCCGTTACCGGAGCGGCATGTTGTTTTACTTTTTCTGTCATTCTTATACCTGCTCTGCGTTCAATGCCTGCGCCCACTGGCGGGCAGACCGTTCAAGTAATGTGTACACCGCTGc  <  1:1517287/140‑1 (MQ=255)
                                                                                                                                    |                                                                                                                                        
CTCGATTTGTACCAGTGCGTCGGCACTATAAATCGGCGTGGCGAAGAAGGTGTAAACCACGGCACAGAGGGCGAATACGGTGGTGATGCCAATCACCCACCAGCGCGCTTCAATGACGGTGCCGACCAGGCGACCAATATCGATTTCATCACTGCCCGTTACCGGAGCGGCATGTTGTTTTACTTTTTCTGTCATTCTTATACCTGCTCTGCGTTCAATGCCTGCGCCCACTGGCGGGCAGACCGTTCAAGTAATGTGTACACCGCTGC  >  NC_000913/2135458‑2135726

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A