Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A8 F28 I1 R1
|
258 |
142.3 |
4824480 |
99.1% |
4781059 |
138.9 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,137,049 |
T→C |
P65P (CCA→CCG) |
wza ← |
outer membrane polysaccharide export protein Wza |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,137,049 | 0 | T | C | 100.0%
| 529.4
/ NA
| 147 | P65P (CCA→CCG) | wza | outer membrane polysaccharide export protein Wza |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (87/60); total (87/60) |
Only 100 of 156 total aligned reads displayed.
ACTGACCGGCTGGCGTGGTGAGTTCCGGGTGATCCCAGACGGTGACATTAAGAACGTCCCCCGGCCCGACGCGATACTGGTAATTCGCGATCTCACTTTCCAGCGTCATATTGGGGCGCGCTACATTCGGGCGTGGGCGTAATTGGTCAATCAGGCGCGGGGTCAGCGGATAAACATTCACCATTTTGTCGAGATCGAAATCAGCGTCCTGCTGTTTGATGACGTCTTTGCCCATCGTCGACATATTGCTGCCCGGAAGTACTGTGCAAC > NC_000913/2136916‑2137185
|
aCTGACCGGCTGGCGTGGTGAGTTCCGGGTGATCCCAGACGGTGACATTAAGAACGTCCCCCGGCCCGACGCGATACTGGTAATTCGCGATCTCACTTTCCAGCGTCATATTGGGGCGCGCTACATTCgggcgcgggcgt < 2:1507219/140‑1 (MQ=255)
tGACCGGCTGGCGTGGTGAGTTCCGGGTGATCCCAGACGGTGACATTAAGAACGTCCCCCGGCCCGACGCGATACTGGTAATTCGCGATCTCACTTTCCAGCGTCATATTGGGGCGCGCTACATTCGGGCGCGGGCGTaa < 1:543440/140‑1 (MQ=255)
cGGCTTGCGTGGTGAGTTCCGGGTGATCCCAGACGGTGACATTAAGAACGTCCCCCGGCCCGGCGCGATACTGGAAATTCGCGATCTCACTTTCCCGCGTCATATTGGGGCGCGCTACATTTGGGCGCGGGGGTAATTgg > 2:543440/1‑140 (MQ=255)
cTGGCGTGGTGAGTTCCGGGTGATCCCAGACGGTGACATTAAGAACGTCCCCCGGCCCGACGCGATACTGGTAATTCGCGATCTCACTTTCCAGCGTCATATTGGGGCGCGCTACATTCGGGCGCGGGCGTAATTGGTCa > 1:638656/1‑140 (MQ=255)
cTGGCGTGGTGAGTTCCGGGTGATCCCAGACGGTGACATTAAGAACGTCCCCCGGCCCGACGCGATACTGGTAATTCGCGATCTCACTTTCCAGCGTCATATTGGGGCGCGCTACATTCGGGCGCGGGCGTAATTGGTCa > 2:1475105/1‑140 (MQ=255)
ggCGTGGTGAGTTCCGGGTGATCCCAGACGGTGACATTAAGAACGTCCCCCGGCCCGACGCGATACTGGTAATTCGCGATCTCACTTTCCAGCGTCATATTGGGGCGCGCTACATTCGGGCGCGGGCGTAATTGGTCAAt < 2:522973/140‑1 (MQ=255)
ggCGTGGTGAGTTCCGGGTGATCCCAGACGGTGACATTAAGAACGTCCCCCGGCCCGACGCGATACTGGTAATTCGCGATCTCACTTTCCAGCGTCATATTGGGGCGCGCTACATTCGGGCGCGGGCGTAATTGGTCAAt < 1:1757874/140‑1 (MQ=255)
gTTCCGGGTGATCCCAGACGGTGACATTAAGAACGTCCCCCGGCCCGACGCGATACTGGTAATTCGCGATCTCACTTTCCAGCGTCATATTGGGGCGCGCTACATTCGGGCGCGGGCGTAATTGGTCAATCAGGCGCggg < 1:282619/140‑1 (MQ=255)
ttCCGGGTGATCCCAGACGGTGACATTAAGAACGTCCCCCGGCCCGACGCGATACTGGTAATTCGCGATCTCACTTTCCAGCGTCATATTGGGGCGCGCTACATTCGGGCGCGGGCGTAATTGGTCAATCAGGCGCgggg > 2:1197494/1‑140 (MQ=255)
cGGGTGATCCCAGACGGTGACATTAAGAACGTCCCCCGGCCCGACGCGATACTGGTAATTCGCGATCTCACTTTCCAGCGTCATATTGGGGCGCGCTACATTCGGGCGCGGGCGTAATTGGTCAATCAGGCGCGGGGTCa < 1:1630654/140‑1 (MQ=255)
gggTGATCCCAGACGGTGACATTAAGAACGTCCCCCGGCCCGACGCGATACTGGTAATTCGCGATCTCACTTTCCAGCGTCATATTGGGGCGCGCTACATTCGGGCGCGGGCGTAATTGGTCAATCAGGCGCGGGGTCAg < 1:1410545/140‑1 (MQ=255)
gTGATCCCAGACGGTGACATTAAGAACGTCCCCCGGCCCGACGCGATACTGGTAATTCGCGATCTCACTTTCCAGCGTCATATTGGGGCGCGCTACATTCGGGCGCGGGCGTAATTGGTCAATCAGGCGCGGGGTCAGCg < 2:1360345/140‑1 (MQ=255)
tCCCAGACGGTGACATTAAGAACGTCCCCCGGCCCGACGCGATACTGGTAATTCGCGATCTCACTTTCCAGCGTCATATTGGGGCGCGCTACATTCGGGCGCGGGCGTAATTGGTCAATCAGGCGCGGGGTCAGCGGATa > 2:1826005/1‑140 (MQ=255)
gACGGTGACATTAAGAACGTCCCCCGGCCCGACGCGATACTGGTAATTCGCGATCTCACTTTCCAGCGTCATATTGGGGCGCGCTACATTCGGGCGCGGGCGTAATTGGTCAATCAGGCGCGGGGTCAGCGGATAAACAt < 2:1490616/140‑1 (MQ=255)
aCGGTGACATTAAGAACGTCCCCCGGCCCGACGCGATACTGGTAATTCGCGATCTCACTTTCCAGCGTCATATTGGGGCGCGCTACATTCGGGCGCGGGCGTAATTGGTCAATCAGGCGCGGGGTCAGCGGATAAACAtt < 2:1727641/140‑1 (MQ=255)
cGGTGACATTAAGAACGTCCCCCGGCCCGACGCGATACTGGTAATTCGCGATCTCACTTTCCAGCGTCATATTGGGGCGCGCTACATTCGGGCGCGGGCGTAATTGGTCAATCAGGCGCGGGGTCAGCGGATAAACATTc < 2:1130428/140‑1 (MQ=255)
tGACATTAAGAACGTCCCCCGGCCCGACGCGATACTGGTAATTCGCGATCTCACTTTCCAGCGTCATATTGGGTCGCGCTACATTCGGGCGCGGGCGTAATTGGTCAATCAGGCGCGGGGTCAGCGGATAAACATTCAcc > 2:59239/1‑140 (MQ=255)
tGACATTAAGAACGTCCCCCGGCCCGACGCGATACTGGTAATTCGCGATCTCACTTTCCAGCGTCATATTGGGGCGCGCTACATTCGGGCGCGGGCGTAATTGGTCAATCAGGCGCGGGGTCAGCg > 2:462605/1‑126 (MQ=255)
tGACATTAAGAACGTCCCCCGGCCCGACGCGATACTGGTAATTCGCGATCTCACTTTCCAGCGTCATATTGGGGCGCGCTACATTCGGGCGCGGGCGTAATTGGTCAATCAGGCGCGGGGTCAGCGGATAAACATTCAcc > 2:2073889/1‑140 (MQ=255)
tGACATTAAGAACGTCCCCCGGCCCGACGCGATACTGGTAATTCGCGATCTCACTTTCCAGCGTCATATTGGGGCGCGCTACATTCGGGCGCGGGCGTAATTGGTCAATCAGGCGCGGGGTCAGCGGATAAACATTCAcc > 2:2051907/1‑140 (MQ=255)
tGACATTAAGAACGTCCCCCGGCCCGACGCGATACTGGTAATTCGCGATCTCACTTTCCAGCGTCATATTGGGGCGCGCTACATTCGGGCGCGGGCGTAATTGGTCAATCAGGCGCGGGGTCAGCGGATAAACATTCAcc > 1:2228471/1‑140 (MQ=255)
tGACATTAAGAACGTCCCCCGGCCCGACGCGATACTGGTAATTCGCGATCTCACTTTCCAGCGTCATATTGGGGCGCGCTACATTCGGGCGCGGGCGTAATTGGTCAATCAGGCGCGGGGTCAGCGGATAAACATTCAcc > 1:1842093/1‑140 (MQ=255)
tGACATTAAGAACGTCCCCCGGCCCGACGCGATACTGGTAATTCGCGATCTCACTTTCCAGCGTCATATTGGGGCGCGCTACATTCGGGCGCGGGCGTAATTGGTCAATCAGGCGCGGGGTCAGCGGATAAACATTCAcc > 2:1449764/1‑140 (MQ=255)
gACATTAAGAACGTCCCCCGGCCCGACGCGATACTGGTAATTCGCGATCTCACTTTCCAGCGTCATATTGGGGCGCGCTACATTCGGGCGCGGGCGTAATTGGTCAATCAGGCGCGGGGTCAGCGGATAAACATTCACCa > 2:1900302/1‑140 (MQ=255)
gACATTAAGAACGTCCCCCGGCCCGACGCGATACTGGTAATTCGCGATCTCACTTTCCAGCGTCATATTGGGGCGCGCTACATTCGGGCGCGGGCGTAATTGGTCAATCAGGCGCGGGGTCAGCGGATAAACATTCACCa > 2:2185795/1‑140 (MQ=255)
gACATTAAGAACGTCCCCCGGCCCGACGCGATACTGGTAATTCGCGATCTCACTTTCCAGCGTCATATTGGGGCGCGCTACATTCGGGCGCGGGCGTAATTGGTCAATCAGGCGCGGGGTCAGCGGATAAACATTCACCa > 1:395126/1‑140 (MQ=255)
aCATTAAGAACGTCCCCCGGCCCGACGCGATACTGGTAATTCGCGATCTCACTTTCCAGCGTCATATTGGGGCGCGCTACATTCGGGCGCGGGCGTAATTGGTCAATCAGGCGCGGGGTCAGCGGATAAACATTCACCAt > 2:1149827/1‑140 (MQ=255)
aCATTAAGAACGTCCCCCGGCCCGACGCGATACTGGTAATTCGCGATCTCACTTTCCAGCGTCATATTGGGGCGCGCTACATTCGGGCGCGGGCGTAATTGGTCAATCAGGCGCGGGGTCAGCGGATAAACATTCACCAt > 2:900702/1‑140 (MQ=255)
aCATTAAGAACGTCCCCCGGCCCGACGCGATACTGGTAATTCGCGATCTCACTTTCCAGCGTCATATTGGGGCGCGCTACATTCGGGCGCGGGCGTAATTGGTCAATCAGGCGCGGGGTCAGCGGATAAACATTCACCAt > 1:1493753/1‑140 (MQ=255)
aGAACGTCCCCCGGCCCGACGCGATACTGGTAATTCGCGATCTCACTTTCCAGCGTCATATTGGGGCGCGCTACATTCGGGCGCGGGCGTAATTGGTCAATCAGGCGCGGGGTCAGCGGATAAACATTCACCATTTTGTc < 2:348322/140‑1 (MQ=255)
gAACGTCCCCCGGCCCGACGCGATACTGGTAATTCGCGATCTCACTTTCCAGCGTCATATTGGGGCGCGCTACATTCGGGCGCGGGCGTAATTGGTCAATCAGGCGCGGGGTCAGCGGATAAACATTCACCATTTTGTCg < 2:1084863/140‑1 (MQ=255)
gAACGTCCCCCGGCCCGACGCGATACTGGTAATTCGCGATCTCACTTTCCAGCGTCATATTGGGGCGCGCTACATTCGGGCGCGGGCGTAATTGGTCAATCAGGCGCGGGGTCAGCGGATAAACATTCACCATTTTGTCg < 1:1347496/140‑1 (MQ=255)
aaCGTCCCCCGGCCCGACGCGATACTGGTAATTCGCGATCTCACTTTCCAGCGTCATATTGGGGCGCGCTACATTCGGGCGCGGGCGTAATTGGTCAATCAGGCGCGGGGTCAGCGGATAAACATTCACCATTTTGTCga > 2:2078529/1‑140 (MQ=255)
tCCCCCGGCCCGACGCGATACTGGTAATTCGCGATCTCACTTTCCAGCGTCATATTGGGGCGCGCTACATTCGGGCGCGGGCGTAATTGGTCAATCAGGCGCGGGGTCAGCGGATAAACATTCACCATTTTGTCGAGATc > 1:969751/1‑140 (MQ=255)
tCCCCCGGCCCGACGCGATACTGGTAATTCGCGATCTCACTTTCCAGCGTCATATTGGGGCGCGCTACATTCGGGCGCGGGCGTAATTGGTCAATCAGGCGCGGGGTCAGCGGATAAACATTCACCATTTTGTCGAGATc > 1:2144404/1‑140 (MQ=255)
tCCCCCGGCCCGACGCGATACTGGTAATTCGCGATCTCACTTTCCAGCGTCATATTGGGGCGCGCTACATTCGGGCGCGGGCGTAATTGGTCAATCAGGCGCGGGGTCAGCGGATAAACATTCACCATTTTGTCGAGATc > 2:1875539/1‑140 (MQ=255)
cccccGGCCCGACGCGATACTGGTAATTCGCGATCTCACTTTCCAGCGTCATATTGGGGCGCGCTACATTCGGGCGCGGGCGTAATTGGTCAATCAGGCGCGGGGTCAGCGGATAAACATTCACCATTTTGt < 1:2011062/132‑1 (MQ=255)
cccccGGCCCGACGCGATACTGGTAATTCGCGATCTCACTTTCCAGCGTCATATTGGGGCGCGCTACATTCGGGCGCGGGCGTAATTGGTCAATCAGGCGCGGGGTCAGCGGATAAACATTCACCATTTTGt > 2:2011062/1‑132 (MQ=255)
ccccGGCCCGACGCGATACTGGTAATTCGCGATCTCACTTTCCAGCGTCATATTGGGGCGCGCTACATTCGGGCGCGGGCGTAATTGGTCAATCAGGCGCGGGGTCAGCGGATAAACATTCACCATTTTGTCGAGATCGa < 1:1926997/140‑1 (MQ=255)
cGGCCCGACGCGATACTGGTAATTCGCGATCTCACTTTCCAGCGTCATATTGGGGCGCGCTACATTCGGGCGCGGGCGTAATTGGTCAATCAGGCGCGGGGTCAGCGGATAAACATTCACCATTTTGTCGAGATCGAAAt < 1:1265739/140‑1 (MQ=255)
ggCCCGACGCGATACTGGTAATTCGCGATCTCACTTTCCAGCGTCATATTGGGGCGCGCTACATTCGGGCGCGGGCGTAATTGGTCAATCAGGCGCGGGGTCAGCGGATAAACATTCACCATTTTGTCGAGATCGAAATc > 1:990725/1‑140 (MQ=255)
gCCCGACGCGATACTGGTAATTCGCGATCTCACTTTCCAGCGTCATATTGGGGCGCGCTACATTCGGGCGCGGGCGTAATTGGTCAATCAGGCGCGGGGTCAGCGGATAAACATTCACCATTTTGTCGAGATCGAAATCa < 2:2344876/140‑1 (MQ=255)
gCCCGACGCGATACTGGTAATTCGCGATCTCACTTTCCAGCGTCATATTGGGGCGCGCTACATTCGGGCGCGGGCGTAATTGGTCAATCAGGCGCGGGGTCAGCGGATAAACATTCACCATTTTGTCGAGATCGAAATCa < 2:395126/140‑1 (MQ=255)
gCCCGACGCGATACTGGTAATTCGCGATCTCACTTTCCAGCGTCATATTGGGGCGCGCTACATTCGGGCGCGGGCGTAATTGGTCAATCAGGCGCGGGGTCAGCGGATAAACATTCACCATTTTGTCGAGATCGAAATCa < 1:2078529/140‑1 (MQ=255)
cGACGCGATACTGGTAATTCGCGATCTCACTTTCCAGCGTCATATTGGGGCGCGCTACATTCGGGCGCGGGCGTAATTGGTCAATCAGGCGCGGGGTCAGCGGATAAACATTCACCATTTTGTCGAGATCGAAATCAGCg < 2:1842093/140‑1 (MQ=255)
aCGCGATACTGGTAATTCGCGATCTCACTTTCCAGCGTCATATTGGGGCGCGCTACATTCGGGCGCGGGCGTAATTGGTCAATCAGGCGCGGGGTCAGCGGATAAACATTCACCATTTTGTCGAGATCGAAATCAGCGTc > 1:1302429/1‑140 (MQ=255)
cgATACTGGTAATTCGCGATCTCACTTTCCAGCGTCATATTGGGGCGCGCTACATTCGGGCGCGGGCGTAATTGGTCAATCAGGCGCGGGGTCAGCGGATAAGCATTCACCATTTTGTCGAGATCGAAATCAGCGTCctg < 1:1029652/140‑1 (MQ=255)
cgATACTGGTAATTCGCGATCTCACTTTCCAGCGTCATATTGGGGCGCGCTACATTCGGGCGCGGGCGTAATTGGTCAATCAGGCGCGGGGTCAGCGGATAAACATTCACCATTTTGTCGAGATCGAAATCAGCGTCctg < 2:1540408/140‑1 (MQ=255)
cgATACTGGTAATTCGCGATCTCACTTTCCAGCGTCATATTGGGGCGCGCTACATTCGGGCGCGGGCGTAATTGGTCAATCAGGCGCGGGGTCAGCGGATAAACATTCACCATTTTGTCGAGATCGAAATCAGCGTCctg < 1:59239/140‑1 (MQ=255)
cgATACTGGTAATTCGCGATCTCACTTTCCAGCGTCATATTGGGGCGCGCTACATTCGGGCGCGGGCGTAATTGGTCAATCAGGCGCGGGGTCAGCGGATAAACATTCACCATTTTGTCGAGATCGAAATCAGCGTCctg < 1:251798/140‑1 (MQ=255)
cgATACTGGTAATTCGCGATCTCACTTTCCAGCGTCATATTGGGGCGCGCTACATTCGGGCGCGGGCGTAATTGGTCAATCAGGCGCGGGGTCAGCGGATAAACATTCACCATTTTGTCGAGATCGAAATCAGCGTCctg < 2:2144404/140‑1 (MQ=255)
gATACTGGTAATTCGCGATCTCACTTTCCAGCGTCATATTGGGGCGCGCTACATTCGGGCGCGGGCGTAATTGGTCAATCAGGCGCGGGGTCAGCGGATAAACATTCACCATTTTGTCGAGATCGAAATCAGCGTCctgc < 1:2350488/140‑1 (MQ=255)
aTACTGGTAATTCGCGATCTCACTTTCCAGCGTCATATTGGGGCGCGCTACATTCGGGCGCGGGCGTAATTGGTCAATCAGGCGCGGGGTCAGCGGATAAACATTCACCATTTTGTCGAGATCGAAATCAGCGTCctgct < 2:1302429/140‑1 (MQ=255)
cTGGTAATTCGCGATCTCACTTTCCAGCGTCATATTGGGGCGCGCTACATTCGGGCGCGGGCGTAATTGGTCAATCAGGCGCGGGGTCAGCGGATAAACATTCACCATTTTGTCGAGATCGAAATCAGCGTCCTGCTGtt > 1:169070/1‑140 (MQ=255)
gTAATTCGCGATCTCACTTTCCAGCGTCATATTGGGGCGCGCTACATTCGGGCGCGGGCGTAATTGGTCAATCAGGCGCGGGGTCAGCGGATAAACATTCACCATTTTGTCGAGATCGAAATCAGCGTCCTGCTGTTtga > 1:210690/1‑140 (MQ=255)
gTAATTCGCGATCTCACTTTCCAGCGTCATATTGGGGCGCGCTACATTCGGGCGCGGGCGTAATTGGTCAATCAGGCGCGGGGTCAGCGGATAAACATTCACCATTTTGTCGAGATCGAAATCAGCGTCCTGCTGTTtga > 2:860381/1‑140 (MQ=255)
gTAATTCGCGATCTCACTTTCCAGCGTCATATTGGGGCGCGCTACATTCGGGCGCGGGCGTAATTGGTCAATCAGGAGCGGGGTCAGCGGATAAACATTCACCATTTTGTCGAGATCGAAATCAGCGTCCTGCTGTTtga > 2:391731/1‑140 (MQ=255)
tCGCGATCTCACTTTCCAGCGTCATATTGGGGCGCGCTACATTCGGGCGCGGGCGTAATTGGTCAATCAGGCGCGGGGTCAGCGGATAAACATTCACCATTTTGTCGAGATCGAAATCAGCGTCCTGCTGTTTGATGACg > 1:892774/1‑140 (MQ=255)
tCGCGATCTCACTTTCCAGCGTCATATTGGGGCGCGCTACATTCGGGCGCGGGCGTAATTGGTCAATCAGGCGCGGGGTCAGCGGATAAACATTCACCATTTTGTCGAGATCGAAATCAGCGTCCTGCTGTTTGATGACg > 1:732650/1‑140 (MQ=255)
tCGCGATCTCACTTTCCAGCGTCATATTGGGGCGCGCTACATTCGGGCGCGGGCGTAATTGGTCAATCAGGCGCGGGGTCAGCGGATAAACATTCACCATTTTGTCGAGATCGAAATCAGCGTCCTGCTGTTTGATGACg < 1:1826005/140‑1 (MQ=255)
cgATCTCACTTTCCAGCGTCATATTGGGGCGCGCTACATTCGGGCGCGGGCGTAATTGGTCAATCAGGCGCGGGGTCAGCGGATAAACATTCACCATTTTGTCGAGATCGAAATCAGCGTCCTGCTGTTTGATGACGTCt > 2:106060/1‑140 (MQ=255)
aTCTCACTTTCCAGCGTCATATTGGGGCGCGCTACATTCGGGCGCGGGCGTAATTGGTCAATCAGGCGCGGGGTCAGCGGATAAACATTCACCATTTTGTCGAGATCGAAATCAGCGTCCTGCTGTTTGATGACGTCttt > 1:1375456/1‑140 (MQ=255)
aTCTCACTTTCCAGCGTCATATTGGGGCGCGCTACATTCGGGCGCGGGCGTAATTGGTCAATCAGGCGCGGGGTCAGCGGATAAACATTCACCATTTTGTCGAGATCGAAATCAGCGTCCTGCTGTTTGATGACGTCttt > 1:503987/1‑140 (MQ=255)
tCCAGCGTCATATTGGGGCGCGCTACATTCGGGCGCGGGCGTAATTGGTCAATCAGGCGCGGGGTCAGCGGATAAACATTCACCATTTTGTCGAGATCGAAATCAGCGTCCTGCTGTTTGATGACGTCTTTGCCCAtcgt < 2:2268146/140‑1 (MQ=255)
tCCAGCGTCATATTGGGGCGCGCTACATTCGGGCGCGGGCGTAATTGGTCAATCAGGCGCGGGGTCAGCGGATAAACATTCACCATTTTGTCGAGATCGAAATCAGCGTCCTGCTG‑TTGATGACGTCTTTGCCCAtcgtc > 1:1989083/1‑140 (MQ=255)
cAGCGTCATATTGGGGCGCGCTACATTCGGGCGCGGGCGTAATTGGTCAATCAGGCGCGGGGTCAGCGGATAAACATTCACCATTTTGTCGAGATCGAAATCAGCGTCCTGCTGTTTGATGACGTCTTTGCCCAtcgtcg > 2:1436556/1‑140 (MQ=255)
cAGCGTCATATTGGGGCGCGCTACATTCGGGCGCGGGCGTAATTGGTCAATCAGGCGCGGGGTCAGCGGATAAACATTCACCATTTTGTCGAGATCGAAATCAGCGTCCTGCTGTTTGATGACGTCTTTGCCCAtcgtcg > 2:132539/1‑140 (MQ=255)
aGCGTCATATTGGGGCGCGCTACATTCGGGCGCGGGCGTAATTGGTCAATCAGGCGCGGGGTCAGCGGATAAACATTCACCATTTTGTCGAGATCGAAATCAGCGTCCTGCTGTTTGATGACGTCTTTGccc < 2:794438/132‑1 (MQ=255)
aGCGTCATATTGGGGCGCGCTACATTCGGGCGCGGGCGTAATTGGTCAATCAGGCGCGGGGTCAGCGGATAAACATTCACCATTTTGTCGAGATCGAAATCAGCGTCCTGCTGTTTGATGACGTCTTTGccc > 1:794438/1‑132 (MQ=255)
gCGTCATATTGGGGCGCGCTACATTCGGGCGCGGGCGTAATTGGTCAATCAGGCGCGGGGTCAGCGGATAAACATTCACCATTTTGTCGAGATCGAAATCAGCGTCCTGCTGTTTGATGACGTCTTTGCCCATCGTCGAc > 1:1055449/1‑140 (MQ=255)
tatTGGGGCGCGCTACATTCGGGCGCGGGCGTAATTGGTCAATCAGGCGCGGGGTCAGCGGATAAACATTCACCATTTTGTCGAGATCGAAATCAGCGTCCTGCTGTTTGATGACGTCTTTGCCCATCGTCGACATATtg > 2:2367797/1‑140 (MQ=255)
tGGGGCGCGCTACATTCGGGCGCGGGCGTAATTGGTCAATCAGGCGCGGGGTCAGCGGATAAACATTCACCATTTTGTCGAGATCGAAATCAGCGTCCTGCTGTTTGATGACGTCTTTGCCCATCGTCGACATATtgctg < 1:900702/140‑1 (MQ=255)
tGGGGCGCGCTACATTCGGGCGCGGGCGTAATTGGTCAATCAGGCGCGGGGTCAGCGGATAAACATTCACCATTTTGTCGAGATCGAAATCAGCGTCCTGCTGTTTGATGACGTCTTTGCCCATCGTCGACATATtgctg < 1:1149827/140‑1 (MQ=255)
tGGGGCGCGCTACATTCGGGCGCGGGCGTAATTGGTCAATCAGGCGCGGGGTCAGCGGATAAACATTCACCATTTTGTCGAGATCGAAATCAGCGTCCTGCTGTTTGATGACGTCTTTGCCCATCGTCGACATATtgctg > 1:1851409/1‑140 (MQ=255)
gggCGCGCTACATTCGGGCGCGGGCGTAATTGGTCAATCAGGCGCGGGGTCAGCGGATAAACATTCACCATTTTGTCGAGATCGAAATCAGCGTCCTGCTGTTTGATGACGTCTTTGCCCATCGTCGACATATTGCTGcc < 1:1109526/140‑1 (MQ=255)
gggCGCGCTACATTCGGGCGCGGGCGTAATTGGTCAATCAGGCGCGGGGTCAGCGGATAAACATTCACCATTTTGTCGAGATCGAAATCAGCGTCCTGCTGTTTGATGACGTCTTTGCCCATCGTCGACATATTGCTGcc > 1:487280/1‑140 (MQ=255)
ggCGCGCTACATTCGGGCGCGGGCGTAATTGGTCAATCAGGCGCGGGGTCAGCGGATAAACATTCACCATTTTGTCGAGATCGAAATCAGCGTCCTGCTGTTTGATGACGTCTTTGCCCATCGTCGACATATTGCTGccc > 1:46797/1‑140 (MQ=255)
gcgcgcTACATTCGGGCGCGGGCGTAATTGGTCAATCAGGCGCGGGGTCAGCGGATAAACATTCACCATTTTGTCGAGATCGAAATCAGCGTCCTGCTGTTTGATGACGTCTTTGCCCATCGTCGACATATtgctg < 1:85766/136‑1 (MQ=255)
gcgcgcTACATTCGGGCGCGGGCGTAATTGGTCAATCAGGCGCGGGGTCAGCGGATAAACATTCACCATTTTGTCGAGATCGAAATCAGCGTCCTGCTGTTTGATGACGTCTTTGCCCATCGTCGACATATtgctg > 2:85766/1‑136 (MQ=255)
gcgcgcTACATTCGGGCGCGGGCGTAATTGGTCAATCAGGCGCGGGGTCAGCGGATAAACATTCACCATTTTGTCGAGATCGAAATCAGCGTCCTGCTGTTTGATGACGTCTTTGCCCATCGTCGACATATTGCTGCCCg > 2:249481/1‑140 (MQ=255)
gcgcgcTACATTCGGGCGCGGGCGTAATTGGTCAATCAGGCGCGGGGTCAGCGGATAAACATTCACCATTTTGTCGAGATCGAAATCAGCGTCCTGCTGTTTGATGACGTCTTTGCCCATCGTCGACATATTGCTGCCCg > 1:2266027/1‑140 (MQ=255)
cgcgcTACATTCGGGCGCGGGCGTAATTGGTCAATCAGGCGCGGGGTCAGCGGATAAACATTCACCATTTTGTCGAGATCGAAATCAGTGTCCTGCTGTTTGATGACGTCTTTGCCCATCGTCGACATATtgctg < 2:1392380/135‑1 (MQ=255)
cgcgcTACATTCGGGCGCGGGCGTAATTGGTCAATCAGGCGCGGGGTCAGCGGATAAACATTCACCATTTTGTCGAGATCGAAATCAGCGTCCTGCTGTTTGATGACGTCTTTGCCCATCGTCGACATATTGCTGcc < 1:520882/137‑1 (MQ=255)
cgcgcTACATTCGGGCGCGGGCGTAATTGGTCAATCAGGCGCGGGGTCAGCGGATAAACATTCACCATTTTGTCGAGATCGAAATCAGCGTCCTGCTGTTTGATGACGTCTTTGCCCATCGTCGACATATTGCTGcc > 2:520882/1‑137 (MQ=255)
cgcgcTACATTCGGGCGCGGGCGTAATTGGTCAATCAGGCGCGGGGTCAGCGGATAAACATTCACCATTTTGTCGAGATCGAAATCAGCGTCCTGCTGTTTGATGACGTCTTTGCCCATCGTCGACATATTGCTGCCCgg > 2:838494/1‑140 (MQ=255)
cgcTACATTCGGGCGCGGGCGTAATTGGTCAATCAGGCGCGGGGTCAGCGGATAAACATTCACCATTTTGTCGAGATCGAAATCAGCGTCCTGCTGTTTGATGACGTCTTTGCCCATCGTCGACATATTGCTGCCCgg > 2:1192377/1‑138 (MQ=255)
cgcTACATTCGGGCGCGGGCGTAATTGGTCAATCAGGCGCGGGGTCAGCGGATAAACATTCACCATTTTGTCGAGATCGAAATCAGCGTCCTGCTGTTTGATGACGTCTTTGCCCATCGTCGACATATTGCTGCCCgg < 1:1192377/138‑1 (MQ=255)
cgcTACATTCGGGCGCGGGCGTAATTGGTCAATCAGGCGCGGGGTCAGCGGATAAACATTCACCATTTTGTCGAGATCGAAATCAGCGTCCTGCTGTTTGATGACGTCTTTGCCCATCGTCGACATATTGCTGCCCgg > 2:1726088/1‑138 (MQ=255)
cgcTACATTCGGGCGCGGGCGTAATTGGTCAATCAGGCGCGGGGTCAGCGGATAAACATTCACCATTTTGTCGAGATCGAAATCAGCGTCCTGCTGTTTGATGACGTCTTTGCCCATCGTCGACATATTGCTGCCCGGaa > 1:1819766/1‑140 (MQ=255)
cgcTACATTCGGGCGCGGGCGTAATTGGTCAATCAGGCGCGGGGTCAGCGGATAAACATTCACCATTTTGTCGAGATCGAAATCAGCGTCCTGCTGTTTGATGACGTCTTTGCCCATCGTCGACATATTGCTGCCCGGaa > 1:1779741/1‑140 (MQ=255)
cgcTACATTCGGGCGCGGGCGTAATTGGTCAATCAGGCGCGGGGTCAGCGGATAAACATTCACCATTTTGTCGAGATCGAAATCAGCGTCCTGCTGTTTGATGACGTCTTTGCCCATCGTCGACATATTGCTGCCCGGaa > 2:600142/1‑140 (MQ=255)
cgcTACATTCGGGCGCGGGCGTAATTGGTCAATCAGGCGCGGGGTCAGCGGATAAACATTCACCATTTTGTCGAGATCGAAATCAGCGTCCTGCTGTTTGATGACGTCTTTGCCCATCGTCGACATATTGCTGCCCGGaa > 2:2028293/1‑140 (MQ=255)
gcTACATTCGGGCGCGGGCGTAATTGGTCAATCAGGCGCGGGGTCAGCGGATAAACATTCACCATTTTGTCGAGATCGAAATCAGCGTCCTGCTGTTTGATGACGTCTTTGCCCATCGTCGACATATTGCTGCCCGGAAg < 1:565539/140‑1 (MQ=255)
gcTACATTCGGGCGCGGGCGTAATTGGTCAATCAGGCGCGGGGTCAGCGGATAAACATTCACCATTTTGTCGAGATCGAAATCAGCGTCCTGCTGTTTGATGACGTCTTTGCCCATCGTCGACATATTGCTGCCCGGAAg < 2:1055449/140‑1 (MQ=255)
gcTACATTCGGGCGCGGGCGTAATTGGTCAATCAGGCGCGGGGTCAGCGGATAAACATTCACCATTTTGTCGAGATCGAAATCAGCGTCCTGCTGTTTGATGACGTCTTTGCCCATCGTCGACATATTGCTGCCCGGAAg > 1:2400009/1‑140 (MQ=255)
cTACATTCGGGCGCGGGCGTAATTGGTCAATCAGGCGCGGGGTCAGCGGATAAACATTCACCATTTTGTCGAGATCGAAATCAGCGTCCTGCTGTTTGATGACGTCTTTGCCCATCGTCGACATATTGCTGCCCGGAAGt > 2:1692908/1‑140 (MQ=255)
tACATTCGGGCGCGGGCGTAATTGGTCAATCAGGCGCGGGGTCAGCGGATAAACATTCACCATTTTGTCGAGATCGAAATCAGCGTCCTGCTGTTTGATGACGTCTTTGCCCATCGTCGACATATTGCTGCCCGGAAGTa < 1:122127/140‑1 (MQ=255)
cgggcgcgggcgTAATTGGTCAATCAGGCGCGGGGTCAGCGGATAAACATTCACCATTTTGTCGAGATCGAAATCAGCGTCCTGCTGTTTGATGACGTCTTTGCCCATCGTCGACATATTGCTGCCCGGAAGTACTGTGc < 1:106060/140‑1 (MQ=255)
gcgcgggcgtAATTGGTCAATCAGGCGCGGGGTCAGCGGATAAACATTCACCATTTTGTCGAGATCGAAATCAGCGTCCTGCTGTTTGATGACGTCTTTGCCCATCGTCGACATATTGCTGCCCGGAAGTACTGTGCAAc < 2:487280/140‑1 (MQ=255)
gcgcgggcgtAATTGGTCAATCAGGCGCGGGGTCAGCGGATAAACATTCACCATTTTGTCGAGATCGAAATCAGCGTCCTGCTGTTTGATGACGTCTTTGCCCATCGTCGACATATTGCTGCCCGGAAGTACTGTGCAAc < 2:1286583/140‑1 (MQ=255)
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ACTGACCGGCTGGCGTGGTGAGTTCCGGGTGATCCCAGACGGTGACATTAAGAACGTCCCCCGGCCCGACGCGATACTGGTAATTCGCGATCTCACTTTCCAGCGTCATATTGGGGCGCGCTACATTCGGGCGTGGGCGTAATTGGTCAATCAGGCGCGGGGTCAGCGGATAAACATTCACCATTTTGTCGAGATCGAAATCAGCGTCCTGCTGTTTGATGACGTCTTTGCCCATCGTCGACATATTGCTGCCCGGAAGTACTGTGCAAC > NC_000913/2136916‑2137185
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
