Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A7 F28 I1 R1
|
183 |
98.6 |
3427438 |
96.9% |
3321187 |
138.7 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,306,423 |
G→A |
A111V (GCA→GTA) |
mqo ← |
malate:quinone oxidoreductase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,306,423 | 0 | G | A | 100.0%
| 304.7
/ NA
| 92 | A111V (GCA→GTA) | mqo | malate:quinone oxidoreductase |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (37/55); total (37/55) |
GCGCGCAGGAAATTGACGTTATCCTCGCCCCAGACAAAGCTCATATGCGGAACGGTATTGATAAATGAACGCGGAGTACGCAGCACGCCGCGCTCAACCTGGTGCGCCCAGAACTGGCGGGAAATCTGAAATGCTTCGTTAATGGCGACTGCTTTTTCAATACTGATGCTGCCATCGGCGTTTTGCGGGGTGTAGTTCAGTTCCATCAGTGCAGAATGCCCGGTTCCGGCGTTATTCCAGCCGTTCGAACTCTCCTGCGCGACA > NC_000913/2306291‑2306554
|
gcgcgcAGGAAATTGACGTTATCCTCGCCCCAGACAAAGCTCATATGCGGAACGGTATTGATAAATGAACGCGGAGTACGCAGCACGCCGCGCTCAACCTGGTGCGCCCAGAACTGGCGGGAAATCTGAAATACTTCGtt > 2:767746/1‑140 (MQ=255)
cgcgcAGGAAATTGACGTTATCCTCGCCCCAGACAAAGCTCATATGCGGAACGGTATTGATAAATGAACGCGGAGTACGCAGCACGCCGCGCTCAACCTGGTGCGCCCAGAACTGGCGGGAAATCTGAAATACTTCGTTa < 2:537673/140‑1 (MQ=255)
gcgcAGGAAATTGACGTTATCCTCGCCCCAGACAAAGCTCATATGCGGAACGGTATTGATAAATGAACGCGGAGTACGCAGCACGCCGCGCTCAACCTGGTGCGCCCAGAACTGGCGGGAAATCTGAAATACTTCGTTaa > 1:1538311/1‑140 (MQ=255)
ttGACGTTATCCTCGCCCCAGACAAAGCTCATATGCGGAACGGTATTGATAAATGAACGCGGAGTACGCAGCACGCCGCGCTCAACCTGGTGCGCCCAGAACTGGCGGGAAATCTGAAATACTTCGTTAATGGCGACTGc < 1:5121/140‑1 (MQ=255)
ttGACGTTATCCTCGCCCCAGACAAAGCTCATATGCGGAACGGTATTGATAAATGAACGCGGAGTACGCAGCACGCCGCGCTCAACCTGGTGCGCCCAGAACTGGCGGGAAATCTGAAATACTTCGTTAATGGCGACTGc < 2:928192/140‑1 (MQ=255)
ttGACGTTATCCTCGCCCCAGACAAAGCTCATATGCGGAACGGTATTGATAAATGAACGCGGAGTACGCAGCACGCCGCGCTCAACCTGGTGCGCCCAGAACTGGCGGGAAATCTGAAATACTTCGTTAATGGCGACTGc < 1:1434821/140‑1 (MQ=255)
cGTTATCCTCGCCCCAGACAAAGCTCATATGCGGAACGGTATTGATAAATGAACGCGGAGTACGCAGCACGCCGCGCTCAACCTGGTGCGCCCAGAACTGGCGGGAAATCTGAAATACTTCGTTAATGGCGACTGc < 2:997658/136‑1 (MQ=255)
cGTTATCCTCGCCCCAGACAAAGCTCATATGCGGAACGGTATTGATAAATGAACGCGGAGTACGCAGCACGCCGCGCTCAACCTGGTGCGCCCAGAACTGGCGGGAAATCTGAAATACTTCGTTAATGGCGACTGc > 1:997658/1‑136 (MQ=255)
tATCCTCGCCCCAGACAAAGCTCATATGCGGAACGGTATTGATAAATGAACGCGGAGTACGCAGCACGCCGCGCTCAACCTGGTGCGCCCAGAACTGGCGGGAAATCTGAAATACTTCGTTAATGGCGACTGCTTTTTCa < 2:1662005/140‑1 (MQ=255)
gCCCCAGACAAAGCTCATATGCGGAACGGTATTGATAAATGAACGCGGAGTACGCAGCACGCCGCGCTCAACCTGGTGCGCCCAGAACTGGCGGGAAATCTGAAATACTTCGTTAATGGCGACTGCTTTTTCAATACTGa > 1:1514161/1‑140 (MQ=255)
gCCCCAGACAAAGCTCATATGCGGAACGGTATTGATAAATGAACGCGGAGTACGCAGCACGCCGCGCTCAACCTGGTGCGCCCAGAACTGGCGGGAAATCTGAAATACTTCGTTAATGGCGACTGCTTTTTCAATACTGa > 1:402495/1‑140 (MQ=255)
cccAGACAAAGCTCATATGCGGAACGGTATTGATAAATGAACGCGGAGTACGCAGCACGCCGCGCTCAACCTGGTGCGCCCAGAACTGGCGGGAAATCTGAAATACTTCGTTAATGGCGACTGCTTTTTCAATACTGAtg < 1:1634727/140‑1 (MQ=255)
ccAGACAAAGCTCATATGCGGAACGGCATTGATAAATGAACGCGGAGTACGCAGCACGCCGCGCTCAACCTGGTGCGCCCAGAACTGGCGGGAAATCTGAAATACTTCGTTAATGGCGACTGCTTTTTCAATACTGAtgc < 2:1514161/140‑1 (MQ=255)
aGACAAAGCTCATATGCGGAACGGTATTGATAAATGAACGCGGAGTACGCAGCACGCCGCGCTCAACCTGGTGCGCCCAGAACTGGCGGGAAATCTGAAATACTTCGTTAATGGCGACTGCTTTTTCAatgctgatgctg > 1:1180715/1‑140 (MQ=255)
aGACAAAGCTCATATGCGGAACGGTATTGATAAATGAACGCGGAGTACGCAGCACGCCGCGCTCAACCTGGTGCGCCCAGAACTGGCGGGAAATCTGAAATACTTCGTTAATGGCGACTGCTTTTTCAATACTGAtgctg > 1:818558/1‑140 (MQ=255)
aaaGCTCATATGCGGAACGGTATTGATAAATGAACGCGGAGTACGCAGCACGCCGCGCTCAACCTGGTGCGCCCAGAACTGGCGGGAAATCTGAAATACTTCGTTAATGGCGACTGCTTTTTCAATACTGATGCTGCCAt < 2:217181/140‑1 (MQ=255)
aGCTCATATGCGGAACGGTATTGATAAATGAACGCGGAGTACGCAGCACGCCGCGCTCAACCTGGTGCGCCCAGAACTGGCGGGAAATCTGAAATACTTCGTTAATGGCGACTGCTTTTTCAATACTGATGCTGCCATCg < 1:1040519/140‑1 (MQ=255)
gCTCATATGCGGAACGGTATTGATAAATGAACGCGGAGTACGCAGCACGCCGCGCTCAACCTGGTGCGCCCAGAACTGGCGGGAAATCTGAAATACTTCGTTAATGGCGACTGCTTTTTCAATACTGATGCTGCCATCgg > 2:1462268/1‑140 (MQ=255)
gCTCATATGCGGAACGGTATTGATAAATGAACGCGGAGTACGCAGCACGCCGCGCTCAACCTGGTGCGCCCAGAACTGGCGGGAAATCTGAAATACTTCGTTAATGGCAACTGCTTTTTCAATACTGATGCTGCCATCgg > 2:735683/1‑140 (MQ=255)
atatGCGGAACGGTATTGATAAATGAACGCGGAGTACGCAGCACGCCGCGCTCAACCTGGTGCGCCCAGAACTGGCGGGAAATCTGAAATACTTCGTTAATGGCGACTGCTTTTTCAATACTGATGCTGCCATCGGCGtt > 1:1054564/1‑140 (MQ=255)
tatGCGGAACGGTATTGATAAATGAACGCGGAGTACGCAGCACGCCGCGCTAAACCTGGTGCGCCCAGAACTGGCGGGAAATCTGAAATACTTCGTTAATGGCGACTGCTTTTTCAATACTGATGCTGCCCTCGGCGttt > 1:1407961/1‑140 (MQ=255)
tatGCGGAACGGTATTGATAAATGAACGCGGAGTACGCAGCACGCCGCGCTAAACCTGGTGCGCCCAGAACTGGCGGGAAATCTGAAATACTTCGTTAATGGCGACTGCTTTTTCAATACTGATGCTGCCATCGGCGttt > 1:863585/1‑140 (MQ=255)
atGCGGAACGGTATTGATAAATGAACGCGGAGTACGCAGCACGCCGCGCTCAACCTGGTGCGCCCAGAACTGGCGGGAAATCTGAAATACTTCGTTAATGGCGACTGCTTTTTCAATACTGATGCTGCCATCGGCGtttt < 1:541/140‑1 (MQ=255)
tGCGGAACGGTATTGATAAATGAACGCGGAGTACGCAGCACGCCGCGCTCAACCTGGTGCGCCCAGAACTGGCGGGAAATCTGAAATACTTCGTTAATGGCGACTGCTTTTTCAATGCTGATGCTGCCATCGGCGTTTTg < 2:1180715/140‑1 (MQ=255)
gCGGAACGGTATTGATAAATGAACGCGGAGTACGCAGCACGCCGCGCTCAACCTGGTGCGCCCAGAACTGGCGGGAAATCTGAAATACTTCGTTAATGGCGACTGCTTTTTCAATACTGATGCTGCCATCGGCGTTTTGc < 1:143040/140‑1 (MQ=255)
cGGAACGGTATTGATAAATGAACGCGGAGTACGCAGCACGCCGCGCTCAACCTGGTGCGCCCAGAACTGGCGGGAAATCTGAAATACTTCGTTAATGGCGACTGCTTTTTCAATACTGATGCTGCCATCGGCGTTTTGCg < 2:260822/140‑1 (MQ=255)
cGGAACGGTATTGATAAATGAACGCGGAGTACGCAGCACGCCGCGCTCAACCTGGTGCGCCCAGAACTGGCGGGAAATCTGAAATACTTCGTTAATGGCGACTGCTTTTTCAATACTGATGCTGCCATCGGCGTTTTGCg < 1:1462268/140‑1 (MQ=255)
cGGAACGGTATTGATAAATGAACGCGGAGTACGCAGCACGCCGCGCTCAACCTGGTGCGCCCAGAACTGGCGGGAAATCTGAAATACTTCGTTAATGGCGACTGCTTTTTCAATACTGATGCTGCCATCGGCGTTTTGCg < 2:1071808/140‑1 (MQ=255)
cGGAACGGTATTGATAAATGAACGCGGAGTACGCAGCACGCCGCGCTCAACCTGGTGCGCCCAGAACTGGCGGGAAATCTGAAATACTTCGTTAATGGCGACTGCTTTTTCAATACTGATGCTGCCATCGGCGTTTTGCg < 2:1305815/140‑1 (MQ=255)
cGGAACGGTATTGATAAATGAACGCGGAGTACGCAGCACGCCGCGCTCAACCTGGTGCGCCCAGAACTGGCGGGAAATCTGAAATACTTCGTTAATGGCGACTGCTTTTTCAATACTGATGCTGCCATCGGCGTTTTGCg < 1:604233/140‑1 (MQ=255)
cGGAACGGTATTGATAAATGAACGCGGAGTACGCAGCACGCCGCGCTCAACCTGGTGCGCCCAGAACTGGCGGGAAATCTGAAATACTTCGTTAATGGCGACTGCTTTTTCAATACTGATGCTGCCATCGGCGTTTTGCg < 2:373506/140‑1 (MQ=255)
cGGAACGGTATTGATAAATGAACGCGGAGTACGCAGCACGCCGCGCTCAACCTGGTGCGCCCAGAACTGGCGGGAAATCTGAAATACTTCGTTAATGGCGACTGCTTTTTCAATACTGATGCTGCCATCGGCGTTTTGCg < 2:671399/140‑1 (MQ=255)
cGGAACGGTATTGATAAATGAACGCGGAGTACGCAGCACGCCGCGCTCAACCTGGTGCGCCCAGAACTGGCGGGAAATCTGAAATACTTCGTTAATGGCGACTGCTTTTTCAATACTGATGCTGCCATCGGCGTTTTGCg < 1:373346/140‑1 (MQ=255)
cGGAACGGTATTGATAAATGAACGCGGAGTACGCAGCACGCCGCGCTCAACCTGGTGCGCCCAGAACTGGCGGGAAATCTGAAATACTTCGTTAATGGCGACTGCTTTTTCAATACTGATGCTGCCATCGGCGTTTTGCg < 2:987982/140‑1 (MQ=255)
cGGAACGGTATTGATAAATGAACGCGGAGTACGCAGCACGCCGCGCTCAACCTGGTGCGCCCAGAACTGGCGGGAAATCTGAAATACTTCGTTAATCGCGACTGCTTTTTCAATACTGATGCTGCCATCGGCGTTTTGCg < 1:1103383/140‑1 (MQ=255)
gAACGGTATTGATAAATGAACGCGGAGTACGCAGCACGCCGCGCTCAACCTGGTGCGCCCAGAACTGGCGGGAAATCTGAAATACTTCGTTAATGGCTACTGCTTTTTCAATACTGATGCTGCCATCGGCGTTTTGCggg > 2:1590528/1‑140 (MQ=255)
gAACGGTATTGATAAATGAACGCGGAGTACGCAGCACGCCGCGCTCAACCTGGTGCGCCCAGAACTGGCGGGAAATCTGAAATACTTCGTTAATGGCGACTGCTTTTTCAATACTGATGCTGCCATCGGCGTTTTGCggg > 1:1008079/1‑140 (MQ=255)
gAACGGTATTGATAAATGAACGCGGAGTACGCAGCACGCCGCGCTCAACCTGGTGCGCCCAGAACTGGCGGGAAATCTGAAATACTTCGTTAATGGCGACTGCTTTTTCAATACTGATGCTGCCATCGGCGTTTTGCggg < 1:617741/140‑1 (MQ=255)
cGGTATTGATAAATGAACGCGGAGTACGCAGCACGCCGCGCTCAACCTGGTGCGCCCAGAACTGGCGGGAAATCTGAAATACTTCGTTAATGGCGACTGCTTTTTCAATACTGATGCTGCCATCGGCGTTTTGCGGGgtg < 2:758011/140‑1 (MQ=255)
cGGTATTGATAAATGAACGCGGAGTACGCAGCACGCCGCGCTCAACCTGGTGCGCCCAGAACTGGCGGGAAATCTGAAATACTTCGTTAATGGCGACTGCTTTTTCAATACTGATGCTGCCATCGGCGTTTTGCGGGgtg < 2:818558/140‑1 (MQ=255)
cGGTATTGATAAATGAACGCGGAGTACGCAGCACGCCGCGCTCAACCTGGTGCGCCCAGAACTGGCGGGAAATCTGAAATACTTCGTTAATGGCGACTGCTTTTTCAATACTGATGCTGCCATCGGCGTTTTGCGGGgtg < 2:402495/140‑1 (MQ=255)
cGGTATTGATAAATGAACGCGGAGTACGCAGCACGCCGCGCTCAACCTGGTGCGCCCAGAACTGGCGGGAAATCTGAAATACTTCGTTAATGGCGACTGCTTTTTCAATACTGATGCTGCCATCGGCGTTTTGCGGGgtg > 2:409768/1‑140 (MQ=255)
ggTATTGATAAATGAACGCGGAGTACGCAGCACGCCGCGCTCAACCTGGTGCGCCCAGAACTGGCGGGAAATCTGAAATACTTCGTTAATGGCGACTGCTTTTTCAATACTGATGCTGCCATCGGCGTTTTGCGGGgtgt < 2:866672/140‑1 (MQ=255)
ggTATTGATAAATGAACGCGGAGTACGCAGCACGCCGCGCTCAACCTGGTGCGCCCAGAACTGGCGGGAAATCTGAAATACTTCGTTAATGGCGACTGCTTTTTCAATACTGATGCTGCCATCGGCGTTTTGCGGGgtgt < 2:1054564/140‑1 (MQ=255)
tATTGATAAATGAACGCGGAGTACGCAGCACGCCGCGCTCAACCTGGTGCGCCCAGAACTGGCGGGAAATCTGAAATACTTCGTTAATGGCGACTGCTTTTTCAATACTGATGCTGCCATCGGCGTTTTGCg > 2:680517/1‑132 (MQ=255)
tATTGATAAATGAACGCGGAGTACGCAGCACGCCGCGCTCAACCTGGTGCGCCCAGAACTGGCGGGAAATCTGAAATACTTCGTTAATGGCGACTGCTTTTTCAATACTGATGCTGCCATCGGCGTTTTGCg > 2:766209/1‑132 (MQ=255)
tATTGATAAATGAACGCGGAGTACGCAGCACGCCGCGCTCAACCTGGTGCGCCCAGAACTGGCGGGAAATCTGAAATACTTCGTTAATGGCGACTGCTTTTTCAATACTGATGCTGCCATCGGCGTTTTGCg < 1:766209/132‑1 (MQ=255)
tATTGATAAATGAACGCGGAGTACGCAGCACGCCGCGCTCAACCTGGTGCGCCCAGAACTGGCGGGAAATCTGAAATACTTCGTTAATGGCGACTGCTTTTTCAATACTGATGCTGCCATCGGCGTTTTGCg < 1:680517/132‑1 (MQ=255)
aTTGATAAATGAACGCGGAGTACGCAGCACGCCGCGCTCAACCTGGTGCGCCCAGAACTGGCGGGAAATCTGAAATACTTCGTTAATGGCGACTGCTTTTTCAATACTGATGCTGCCATCGGCGTTTTGCGGGGTGTagt < 1:1566853/140‑1 (MQ=255)
aTTGATAAATGAACGCGGAGTACGCAGCACGCCGCGCTCAACCTGGTGCGCCCAGAACTGGCGGGAAATCTGAAATACTTCGTTAATGGCGACTGCTTTTTCAATACTGATGCTGCCATCGGCGTTTTGCGGGGTGTagt < 1:798531/140‑1 (MQ=255)
ttGATAAATGAACGCGGAGTACGCAGCACGCCGCGCTCAACCTGGTGCGCCCAGAACTGGCGGGAAATCTGAAATACTTCGTTAATGGCAACTGCTTTTTCAATACTGATGCTGCCATCGGCGTTTTGCGGGGTGTagtt < 1:735683/140‑1 (MQ=255)
tAAATGAACGCGGAGTACGCAGCACGCCGCGCTCAACCTGGTGCGCCCAGAACTGGCGGGAAATCTGAAATACTTCGTTAATGGCGACTGCTTTTTCAATACTGATGCTGCCATCGGCGTTTTGCGGGGTGTagttcagt < 1:1590528/140‑1 (MQ=255)
tAAATGAACGCGGAGTACGCAGCACGCCGCGCTCAACCTGGTGCGCCCAGAACTGGCGGGAAATCTGAAATACTTCGTTAATGGCGACTGCTTTTTCAATACTGATGCTGCCATCGGCGTTTTGCGGGGTGTagttcagt < 1:1460349/140‑1 (MQ=255)
tAAATGAACGCGGAGTACGCAGCACGCCGCGCTAAACCTGGTGCGCCCAGAACTGGCGGGAAATCTGAAATACTTCGTTAATGGCGACTGCTTTTTCAATACTGATGCTGCGATCGGCGTTTTGCGGGGTGTagttcagt < 2:1407961/140‑1 (MQ=255)
tAAATGAACGCGGAGTACGCAGCACGCCGCGCTAAACCTGGTGCGCCCAGAACTGGCGGGAAATCTGAAATACTTCGTTAATGGCGACTGCTTTTTCAATACTGATGCTGCCATCGGCGTTTTGCGGGGTGTagttcagt < 2:863585/140‑1 (MQ=255)
aTGAACGCGGAGTACGCAGCACGCCGCGCTCAACCTGGTGCGCCCAGAACTGGCGGGAAATCTGAAATACTTCGTTAATGGCGACTGCTTTTTCAATACTGATGCTGCCATCGGCGTTTTGCGGGGTGTagttcagttc > 2:1393299/1‑139 (MQ=255)
aTGAACGCGGAGTACGCAGCACGCCGCGCTCAACCTGGTGCGCCCAGAACTGGCGGGAAATCTGAAATACTTCGTTAATGGCGACTGCTTTTTCAATACTGATGCTGCCATCGGCGTTTTGCGGGGTGTagttcagttc < 1:1393299/139‑1 (MQ=255)
tGAACGCGGAGTACGCAGCACGCCGCGCTCAACCTGGTGCGCCCAGAACTGGCGGGAAATCTGAAATACTTCGTTAATGGCGACTGCTTTTTCAATACTGATGCTGCCATCGGCGTTTTGCGGGGTGTAGTTCAGTTCCa > 2:1416004/1‑140 (MQ=255)
tGAACGCGGAGTACGCAGCACGCCGCGCTCAACCTGGTGCGCCCAGAACTGGCGGGAAATCTGAAATACTTCGTTAATGGCGACTGCTTTTTCAATACTGATGCTGCCATCGGCGTTTTGCGGGGTGTAGTTCAGTTCCa > 1:902491/1‑140 (MQ=255)
tGAACGCGGAGTACGCAGCACGCCGCGCTCAACCTGGTGCGCCCAGAACTGGCGGGAAATCTGAAATACTTCGTTAATGGCGACTGCTTTTTCAATACTGATGCTGCCATCGGCGTTTTGCGGGGTGTAGTTCAGTTCCa > 1:918004/1‑140 (MQ=255)
tGAACGCGGAGTACGCAGCACGCCGCGCTCAACCTGGTGCGCCCAGAACTGGCGGGAAATCTGAAATACTTCGTTAATGGCGACTGCTTTTTCAATACTGATGCTGCCATCGGCGTTTTGCGGGGTGTAGTTCAGTTCCa < 1:921062/140‑1 (MQ=255)
tGAACGCGGAGTACGCAGCACGCCGCGCTCAACCTGGTGCGCCCAGAACTGGCGGGAAATCTGAAATACTTCGTTAATGGCGACTGCTTTTTCAATACTGATGCTGCCATCGGCGTTTTGCGGGGTGTAGTTCAGTTCCa > 2:1274491/1‑140 (MQ=255)
tGAACGCGGAGTACGCAGCACGCCGCGCTCAACCTGGTGCGCCCAGAACTGGCGGGAAATCTGAAATACTTCGTTAATGGCGACTGCTTTTTCAATACTGATGCTGCCATCGGCGTTTTGCGGGGTGTAGTTCAGTTCCa > 1:469456/1‑140 (MQ=255)
tGAACGCGGAGTACGCAGCACGCCGCGCTCAACCTGGTGCGCCCAGAACTGGCGGGAAATCTGAAATACTTCGTTAATGGCGACTGCTTTTTCAATACTGATGCTGCCATCGGCGTTTTGCGGGGTGTAGTTCAGTTCCa > 2:439785/1‑140 (MQ=255)
gAACGCGGAGTACGCAGCACGCCGCGCTCAACCTGGTGCGCCCAGAACTGGCGGGAAATCTGAAATACTTCGTTAATGGCGACTGCTTTTTCAATACTGATGCTGCCATCGGCGTTTTGCGGGGTGTAGTTCAGTTCCAt < 2:902491/140‑1 (MQ=255)
cgcgGAGTACGCAGCACGCCGCGCTCAACCTGGTGCGCCCAGAACTGGCGGGAAATCTGAAATACTTCGTTAATGGCGACTGCTTTTTCAATACTGATGCTGCCATCGGCGTTTTGCGGGGTGTagt < 1:783551/127‑1 (MQ=255)
cgcgGAGTACGCAGCACGCCGCGCTCAACCTGGTGCGCCCAGAACTGGCGGGAAATCTGAAATACTTCGTTAATGGCGACTGCTTTTTCAATACTGATGCTGCCATCGGCGTTTTGCGGGGTGTagt > 2:783551/1‑127 (MQ=255)
gcgGAGTACGCAGCACGCCGCGCTCAACCTGGTGCGCCCAGAACTGGCGGGAAATCTGAAATACTTCGTTAATGGCGACTGCTTTTTCAATACTGATGCTGCCATCGGCGTTTTGCGGGGTGTAGTTCAGTTCCATCAGt > 2:573566/1‑140 (MQ=255)
gcgGAGTACGCAGCACGCCGCGCTCAACCTGGTGCGCCCAGAACTGGCGGGAAATCTGAAATACTTCGTTAATGGCGACTGCTTTTTCAATACTGATGCTGCCATCGGCGTTTTGCGGGGTGTAGTTCAGTTCCATCAGt > 2:71713/1‑140 (MQ=255)
aGTACGCAGCACGCCGCGCTCAACCTGGTGCGCCCAGAACTGGCGGGAAATCTGAAATACTTCGTTAATGGCGACTGCTTTTTCAATACTGATGCTGCCATCGGCGTTTTGCGGGGTGTAGTTCAGTTCCATCAGTGCAg > 1:705549/1‑140 (MQ=255)
aCGCCGCGCTCAACCTGGTGCGCCCAGAACTGGCGGGAAATCTGAAATACTTCGTTAATGGCGACTGCTTTTTCAATACTGATGCTGCCATCGGCGTTTTGCGGGGTGTAGTTCAGTTCCAt > 1:267339/1‑122 (MQ=255)
aCGCCGCGCTCAACCTGGTGCGCCCAGAACTGGCGGGAAATCTGAAATACTTCGTTAATGGCGACTGCTTTTTCAATACTGATGCTGCCATCGGCGTTTTGCGGGGTGTAGTTCAGTTCCAt < 2:267339/122‑1 (MQ=255)
aCGCCGCGCTCAACCTGGTGCGCCCAGAACTGGCGGGAAATCTGAAATACTTCGTTAATGGCGACTGCTTTTTCAATACTGATGCTGCCATCGGCGTTTTGCGGGGTGTAGTTCAGTTCCATCAGTGCAGAATGCCCGGt > 1:697515/1‑140 (MQ=255)
gtcgcgCTCAACCTGGTGCGCCCAGAACTGGCGGGAAATCTGAAATACTTCGTTAATGGCGACTGCTTTTTCAATACTGATGCTGCCATCGGCGTTTTGCGGGGTGTAGTTCAGTTCCATCAGTGCAGAATGCCCGGTTc < 1:149664/138‑1 (MQ=255)
cgcgCTCAACCTGGTGCGCCCAGAACTGGCGGGAAATCTGAAATACTTCGTTAATGGCGACTGCTTTTTCAATACTGATGCTGCCATCGGCGTTTTGCGGGGTGTAGTTCAGTTCCATCAGTGCAGAATGCCCGGTTCCg > 2:62867/1‑140 (MQ=255)
cgcTCAACCTGGTGCGCCCAGAACTGGCGGGAAATCTGAAATACTTCGTTAATGGCGACTGC‑TTTTCAATACTGATGCTGCCATCGGCGTTTTGCGGGGTGTAGTTCAGTTCCATCAGTGCAGAATGCCCGGTTCCGGCg < 1:528568/140‑1 (MQ=255)
gcTCAACCTGGTGCGCCCAGAACTGGCGGGAAATCTGAAATACTTCGTTAATGGCGACTGCTTTTTCAATACTGATGCTGCCATCGGCGTTTTGCGGGGTGTAGTTCAGTTCCATCAGTGCAGAATGCCCGGTTCCGGCg < 1:573566/140‑1 (MQ=255)
gcTCAACCTGGTGCGCCCAGAACTGGCGGGAAATCTGAAATACTTCGTTAATGGCGACTGCTTTTTCAATACTGATGCTGCCATCGGCGTTTTGCGGGGTGTAGTTCAGTTCCATCAGTGCAGAATGCCCGGTTCCGGCg < 1:253683/140‑1 (MQ=255)
cTCAACCTGGTGCGCCCAGAACTGGCGGGAAATCTGAAATACTTCGTTAATGGCGACTGCTTTTTCAATACTGATGCTGCCATCGGCGTTTTGCGGGGTGTAGTTCAGTTCCATCAGTGCAGAATGCCCGGTTCCGGCGt < 2:986483/140‑1 (MQ=255)
tGGTGCGCCCAGAACTGGCGGGAAATCTGAAATACTTCGTTAATGGCGACTGCTTTTTCAATACTGATGCTGCCATCGGCGTTTTGCGGGGTGTAGTTCAGTTCCATCAGTGCAGAATGCCCGGTTCCGGCGTTATTCCa < 2:697515/140‑1 (MQ=255)
ggTGCGCCCAGAACTGGCGGGAAATCTGAAATACTTCGTTAATGGCGACTGCTTTTTCAATACTGATGCTGCCATCGGCGTTTTGCGGGGTGTAGTTCAGTTCCATCAGTGCAGAATGCCCGGTTCCGGCGTTATTCCAg < 2:1285836/140‑1 (MQ=255)
tGCGCCCAGAACTGGCGGGAAATCTGAAATACTTCGTTAATGGCGACTGCTTTTTCAATACTGATGCTGCCATCGGCGTTTTGCGGGGTGTAGTTCAGTTCCATCAGTGCAGAATGCCCGGTTCCGGCGTTATTCCAGcc > 2:1662998/1‑140 (MQ=255)
tGCGCCCAGAACTGGCGGGAAATCTGAAATACTTCGTTAATGGCGACTGCTTTTTCAATACTGATGCTGCCATCGGCGTTTTGCGGGGTGTAGTTCAGTTCCATCAGTGCAGAATGCCCGGTTCCGGCGTTATTCCAGcc > 2:1463443/1‑140 (MQ=255)
gcCCAGAACTGGCGGGAAATCTGAAATACTTCGTTAATGGCGACTGCTTTTTCAATACTGATGCTGCCATCGGCGTTTTGCGGGGTGTAGTTCAGTTCCATCAGTGCAGAATGCCCGGTTCCGGCGTTATTCCAGc < 2:838729/136‑1 (MQ=255)
gcCCAGAACTGGCGGGAAATCTGAAATACTTCGTTAATGGCGACTGCTTTTTCAATACTGATGCTGCCATCGGCGTTTTGCGGGGTGTAGTTCAGTTCCATCAGTGCAGAATGCCCGGTTCCGGCGTTATTCCAGc > 1:838729/1‑136 (MQ=255)
ccAGAACTGGCGGGAAATCTGAAATACTTCGTTAATGGCGACTGCTTTTTCAATACTGATGCTGCCATCGGCGTTTTGCGGGGTGTAGTTCAGTTCCATCAGTGCAGAATGCCCGGTTCCGGCGTTATTCCAGCCGTTCg > 2:1230610/1‑140 (MQ=255)
tGGCGGGAAATCTGAAATACTTCGTTAATGGCGACTGCTTTTTCAATACTGATGCTGCCATCGGCGTTTTGCGGGGTGTAGTTCAGTTCCATCAGTGCAGAATGCCCGGTTCCGGCGTTATTCCAGCCGTTCGAACtctc < 1:767746/140‑1 (MQ=255)
gCGGGAAATCTGAAATACTTCGTTAATGGCGACTGCTTTTTCAATACTGATGCTGCCATCGGCGTTTTGCGGGGTGTAGTTCAGTTCCATCAGTGCAGAATGCCCGGTTCCGGCGTTATTCCAGCCGTTCGAACTCTCCt > 2:7983/1‑140 (MQ=255)
cGGGAAATCTGAAATACTTCGTTAATGGCGACTGCTTTTTCAATACTGATGCTGCCATCGGCGTTTTGCGGGGTGTAGTTCAGTTCCATCAGTGCAGAATGCCCGGTTCCGGCGTTATTCCAGCCGTTCGAACTCTCCTg > 2:594550/1‑140 (MQ=255)
aaTCTGAAATACTTCGTTAATGGCGACTGCTTTTTCAATACTGATGCTGCCATCGGCGTTTTGCGGGGTGTAGTTCAGTTCCATCAGTGCAGAATGCCCGGTTCCGGCGTTATTCCAGCCGTTCGAACTCTCCTGCGCGa < 1:654110/140‑1 (MQ=255)
tCTGAAATACTTCGTTAATGGCGACTGCTTTTTCAATACTGATGCTGCCATCGGCGTTTTGCGGGGTGTAGTTCAGTTCCATCAGTGCAGAATGCCCGGTTCCGGCGTTATTCCAGCCGTTCGAACTCTCCTGCGCGaca < 2:776594/140‑1 (MQ=255)
tCTGAAATACTTCGTTAATGGCGACTGCTTTTTCAATACTGATGCTGCCATCGGCGTTTTGCGGGGTGTAGTTCAGTTCCATCAGTGCAGAATGCCCGGTTCCGGCGTTATTCCAGCCGTTCGAACTCTCCTGCGCGaca < 2:1538311/140‑1 (MQ=255)
|
GCGCGCAGGAAATTGACGTTATCCTCGCCCCAGACAAAGCTCATATGCGGAACGGTATTGATAAATGAACGCGGAGTACGCAGCACGCCGCGCTCAACCTGGTGCGCCCAGAACTGGCGGGAAATCTGAAATGCTTCGTTAATGGCGACTGCTTTTTCAATACTGATGCTGCCATCGGCGTTTTGCGGGGTGTAGTTCAGTTCCATCAGTGCAGAATGCCCGGTTCCGGCGTTATTCCAGCCGTTCGAACTCTCCTGCGCGACA > NC_000913/2306291‑2306554
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
