Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A7 F28 I1 R1	183	98.6	3427438	96.9%	3321187	138.7

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,414,396	C→T	R309R (CGC→CGT)	ackA →	acetate kinase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,414,396	0	C	T	100.0%	236.6 / NA	67	R309R (CGC→CGT)	ackA	acetate kinase
Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (23/44); total (23/44)

CGCAATCAACAAACTGCTGACCAAAGAGTCTGGCCTGCTGGGTCTGACCGAAGTGACCAGCGACTGCCGCTATGTTGAAGACAACTACGCGACGAAAGAAGACGCGAAGCGCGCAATGGACGTTTACTGCCACCGCCTGGCGAAATACATCGGTGCCTACACTGCGCTGATGGATGGTCGTCTGGACGCTGTTGTATTCACTGGTGGTATCGGTGAAAATGCCGCAATGGTTCGTGAACTGTCTCTGGGCAAACTGGGCGTGCTGGGC  >  NC_000913/2414261‑2414528

cGCAATCAACAAACTGCTGACCAAAGAGTCTGGCCTGCTGGGTCTGACCGAAGTGACCAGCGACTGCCGCTATGTTGAAGACAACTACGCGACGAAAGAAGACGCGAAGCGCGCAATGGACGTTTACTGCCACCGTCTgg                                                                                                                                  <  2:193168/140‑1 (MQ=255)

  cAATCAACAAACTGCTGACCAAAGAGTCTGGCCTGCTGGGTCTGACCGAAGTGACCAGCGACTGCCGCTATGTTGAAGACAACTACGCGACGAAAGAAGACGCGAAGCGCGCAATGGACGTTTACTGCCACCGTCTGGCg                                                                                                                                <  1:497572/140‑1 (MQ=255)

    aTCAACAAACTGCTGACCAAAGAGTCTGGCCTGCTGGGTCTGACCGAAGTGACCAGCGACTGCCGCTATGTTGAAGACAACTACGCGACGAAAGAAGACGCGAAGCGCGCAATGGACGTTTACTGCCACCGTCTGGCGaa                                                                                                                              >  1:130231/1‑140 (MQ=255)

       aacaaACTGCTGACCAAAGAGTCTGGCCTGCTGGGTCTGACCGAAGTGACCAGCGACTGCCGCTATGTTGAAGACAACTACGCGACGAAAGAAGACGCGAAGCGCGCAATGGACGTTTACTGCCACCGTCTGGCGAAATa                                                                                                                           >  1:885884/1‑140 (MQ=255)

           aaCTGCTGACCAAAGAGTCTGGCCTGCTGGGTCTGACCGAAGTGACCAGCGACTGCCGCTATGTTGAAGACAACTACGCGACGAAAGAAGACGCGAAGCGCGCAATGGACGTTTACTGCCACCGTCTGGCGAAATACATc                                                                                                                       <  1:508497/140‑1 (MQ=255)

           aaCTGCTGACCAAAGAGTCTGGCCTGCTGGGTCTGACCGAAGTGACCAGCGACTGCCGCTATGTTGAAGACAACTACGCGACGAAAGAAGACGCGAAGCGCGCAATGGACGTTTACTGCCACCGTCTGGCGAAATACATc                                                                                                                       <  2:853045/140‑1 (MQ=255)

           aaCTGCTGACCAAAGAGTCTGGCCTGCTGGGTCTGACCGAAGTGACCAGCGACTGCCGCTATGTTGAAGACAACTACGCGACGAAAGAAGACGCGAAGCGCGCAATGGACGTTTACTGCCACCGTCTGGCGAAATACATc                                                                                                                       <  1:389211/140‑1 (MQ=255)

           aaCTGCTGACCAAAGAGTCTGGCCTGCTGGGTCTGACCGAAGTGACCAGCGACTGCCGCTATGTTGAAGACAACTACGCGACGAAAGAAGACGCGAAGCGCGCAATGGACGTTTACTGCCACCGTCTGGCGAAATACATc                                                                                                                       <  1:1637244/140‑1 (MQ=255)

           aaCTGCTGACCAAAGAGTCTGGCCTGCTGGGTCTGACCGAAGTGACCAGCGACTGCCGCTATGTTGAAGACAACTACGCGACGAAAGAAGACGCGAAGCGCGCAATGGACGTTTACTGCCACCGTCTGGCGAAATACATc                                                                                                                       <  2:661661/140‑1 (MQ=255)

             ctgctgACCAAAGAGTCTGGCCTGCTGGGTCTGACCGAAGTGACCAGCGACTGCCGCTATGTTGAAGACAACTACGCGACGAAAGAAGACGCGAAGCGCGCAATGGACGTTTACTGCCACCGTCTGGCGAAATACATCgg                                                                                                                     >  2:921908/1‑140 (MQ=255)

             ctgctgACCAAAGAGTCTGGCCTGCTGGGTCTGACCGAAGTGACCAGCGACTGCCGCTATGTTGAAGACAACTACGCGACGAAAGAAGACGCGAAGCGCGCAATGGACGTTTACTGCCACCGTCTGGCGAAATACATCgg                                                                                                                     <  1:1611662/140‑1 (MQ=255)

               gctgACCAAAGAGTCTGGCCTGCTGGGTCTGACCGAAGTGACCAGCGACTGCCGCTATGTTGAAGACAACTACGCGACGAAAGAAGACGCGAAGCGCGCAATGGACGTTTACTGCCACCGTCTGGCGAAATACATCGGTg                                                                                                                   >  1:1617045/1‑140 (MQ=255)

                ctgACCAAAGAGTCTGGCCTGCTGGGTCTGACCGAAGTGACCAGCGACTGCCGCTATGTTGAAGACAACTACGCGACGAAAGAAGACGCGAAGCGCGCAATGGACGTTTACTGCCACCGTCTGGCGAAATACATCGGTGc                                                                                                                  <  2:548470/140‑1 (MQ=255)

                ctgACCAAAGAGTCTGGCCTGCTGGGTCTGACCGAAGTGACCAGCGACTGCCGCTATGTTGAAGACAACTACGCGACGAAAGAAGACGCGAAGCGCGCAATGGACGTTTACTGCCACCGTCTGGCGAAATACATCGGTGc                                                                                                                  <  2:279023/140‑1 (MQ=255)

                 tgACCAAAGAGTCTGGCCTGCTGGGTCTGACCGAAGTGACCAGCGACTGCCGCTATGTTGAAGACAACTACGCGACGAAAGAAGACGCGAAGCGCGCAATGGACGTTTACTGCCACCGTCTGGCGAAATACATCGGTGcc                                                                                                                 >  1:1234937/1‑140 (MQ=255)

                       aaGAGTCTGGCCTGCTGGGTCTGACCGAAGTGACCAGCGACTGCCGCTATGTTGAAGACAACTACGCGACGAAAGAAGACGCGAAGCGCGCAATGGACGTTTACTGCCACCGTCTGGCGAAATACATCGGTGCCTACACt                                                                                                           <  1:886579/140‑1 (MQ=255)

                        agagTCTGGCCTGCTGGGTCTGACCGAAGTGACCAGCGACTGCCGCTATGTTGAAGACAACTACGCGACGAAAGAAGACGCGAAGCGCGCAATGGACGTTTACTGCCACCGTCTGGCGAAATACATCGGTGCCTACACTg                                                                                                          >  2:1617900/1‑140 (MQ=255)

                              tGGCCTGCTGGGTCTGACCGAAGTGACCAGCGACTGCCGCTATGTTGAAGACAACTACGCGACGAAAGAAGACGCGAAGCGCGCAATGGACGTTTACTGCCACCGTCTGGCGAAATACATCGGTGCCTACACTGCGCTga                                                                                                    >  1:627544/1‑140 (MQ=255)

                               ggCCTGCTGGGTCTGACCGAAGTGACCAGCGACTGCCGCTATGTTGAAGACAACTACGCGACGAAAGAAGACGCGAAGCGCGCAATGGACGTTTACTGCCACCGTCTGGCGAAATACATCGGTGCCTACACTGCGCTgat                                                                                                   >  1:1067746/1‑140 (MQ=255)

                                    gctgGGTCTGACCGAAGTGACCAGCGACTGCCGCTATGTTGAAGACAACTACGCGACGAAAGAAGACGCGAAGCGCGCAATGGACGTTTACTGCCACCGTCTGGCGAAATACATCGGTGCCTACACTGCGCTgatggatg                                                                                              <  1:1654752/140‑1 (MQ=255)

                                    gctgGGTCTGACCGAAGTGACCAGCGACTGCCGCTATGTTGAAGACAACTACGCGACGAAAGAAGACGCGAAGCGCGCAATGGACGTTTACTGCCACCGTCTGGCGAAATACATCGGTGCCTACACTGCGCTgatggatg                                                                                              <  2:1189911/140‑1 (MQ=255)

                                     ctgGGTCTGACCGAAGTGACCAGCGACTGCCGCTATGTTGAAGACAACTACGCGACGAAAGAAGACGCGAAGCGCGCAATGGACGTTTACTGCCACCGTCTGGCGAAATACATCGGTGCCTACACTGCGCTGatggatgg                                                                                             >  2:11456/1‑140 (MQ=255)

                                         gTCTGACCGAAGTGACCAGCGACTGCCGCTATGTTGAAGACAACTACGCGACGAAAGAAGACGCGAAGCGCGCAATGGACGTTTACTGCCACCGTCTGGCGAAATACATCGGTGCCTACACTGCGCTGATGGATGgtcgt                                                                                         <  2:462929/140‑1 (MQ=255)

                                          tCTGACCGAAGTGACCAGCGACTGCCGCTATGTTGAAGACAACTACGCGACGAAAGAAGACGCGAAGCGCGCAATGGACGTTTACTGCCACCGTCTGGCGAAATACATCGGTGCCTACACTGCGCTGATGGATGgtcgtc                                                                                        >  1:142173/1‑140 (MQ=255)

                                          tCTGACCGAAGTGACCAGCGACTGCCGCTATGTTGAAGACAACTACGCGACGAAAGAAGACGCGAAGCGCGCAATGGACGTTTACTGCCACCGTCTGGCGAAATACATCGGTGCCTACACTGCGCTGATGGATGgtcgtc                                                                                        >  1:1507934/1‑140 (MQ=255)

                                              aCCGAAGTGACCAGCGACTGCCGCTATGTTGAAGACAACTACGCGACGAAAGAAGACGCGAAGCGCGCAATGGACGTTTACTGTCACCGTCTGGCGAAATACATCGGTGCCTACACTGCGCTGATGGATGGTCGTCTGGa                                                                                    >  1:453154/1‑140 (MQ=255)

                                              aCCGAAGTGACCAGCGACTGCCGCTATGTTGAAGACAACTACGCGACGAAAGAAGACGCGAAGCGCGCAATGGACGTTTACTGCCACCGTCTGGCGAAATACATCGGTGCCTACACTGCGCTGATGGATGGTCGTCTGGa                                                                                    <  1:925243/140‑1 (MQ=255)

                                              aCCGAAGTGACCAGCGACTGCCGCTATGTTGAAGACAACTACGCGACGAAAGAAGACGCGAAGCGCGCAATGGACGTTTACTGCCACCGTCTGGCGAAATACATCGGTGCCTACACTGCGCTGATGGATGGTCGTCTGGa                                                                                    <  2:130231/140‑1 (MQ=255)

                                              aCCGAAGTGACCAGCGACTGCCGCTATGTTGAAGACAACTACGCGACGAAAGAAGACGCGAAGCGCGCAATGGACGTTTACTGCCACCGTCTGGCGAAATACATCGGTGCCTACACTGCGCTGATGGATGGTCGTCTGGa                                                                                    <  1:615894/140‑1 (MQ=255)

                                              aCCGAAGTGACCAGCGACTGCCGCTATGTTGAAGACAACTACGCGACGAAAGAAGACGCGAAGCGCGCAATGGACGTTTACTGCCACCGTCTGGCGAAATACATCGGTGCCTACACTGCGCTGATGGATGGTCGTCTGGa                                                                                    <  1:655116/140‑1 (MQ=255)

                                              aCCGAAGTGACCAGCGACTGCCGCTATGTTGAAGACAACTACGCGACGAAAGAAGACGCGAAGCGCGCAATGGACGTTTACTGCCACCGTCTGGCGAAATACATCGGTGCCTACACTGCGCTGATGGATGGTCGTCTGGa                                                                                    <  2:1067746/140‑1 (MQ=255)

                                                cGAAGTGACCAGCGACTGCCGCTATGTTGAAGACAACTACGCGACGAAAGAAGACGCGAAGCGCGCAATGGACGTTTACTGCCACCGTCTGGCGAAATACATCGGTGCCTACACTGCGCTGATGGATGGTCGTCTGGACg                                                                                  <  2:1024423/140‑1 (MQ=255)

                                                cGAAGTGACCAGCGACTGCCGCTATGTTGAAGACAACTACGCGACGAAAGAAGACGCGAAGCGCGCAATGGACGTTTACTGCCACCGTCTGGCGAAATACATCGGTGCCTACACTGCGCTGATGGATGGTCGTCTGGACg                                                                                  <  1:852427/140‑1 (MQ=255)

                                                cGAAGTGACCAGCGACTGCCGCTATGTTGAAGACAACTACGCGACGAAAGAAGACGCGAAGCGCGCAATGGACGTTTACTGCCACCGTCTGGCGAAATACATCGGTGCCTACACTGCGCTGATGGATGGTCGTCTGGACg                                                                                  <  2:829853/140‑1 (MQ=255)

                                                    gTGACCAGCGACTGCCGCTATGTTGAAGACAACTACGCGACGAAAGAAGACGCGAAGCGCGCAATGGACGTTTACTGCCACCGTCTGGCGAAATACATCGGTGCCTACACTGCGCTGATGGATGGTCGTCTGGACGCtgt                                                                              <  2:1678553/140‑1 (MQ=255)

                                                        ccAGCGACTGCCGCTATGTTGAAGACAACTACGCGACGAAAGAAGACGCGAAGCGCGCAATGGACGTTTACTGCCACCGTCTGGCGAAATACATCGGTGCCTACACTGCGCTGATGGATGGTCGTCt                                                                                       >  2:1043471/1‑127 (MQ=255)

                                                        ccAGCGACTGCCGCTATGTTGAAGACAACTACGCGACGAAAGAAGACGCGAAGCGCGCAATGGACGTTTACTGCCACCGTCTGGCGAAATACATCGGTGCCTACACTGCGCTGATGGATGGTCGTCt                                                                                       >  2:980977/1‑127 (MQ=255)

                                                        ccAGCGACTGCCGCTATGTTGAAGACAACTACGCGACGAAAGAAGACGCGAAGCGCGCAATGGACGTTTACTGCCACCGTCTGGCGAAATACATCGGTGCCTACACTGCGCTGATGGATGGTCGTCt                                                                                       <  1:980977/127‑1 (MQ=255)

                                                        ccAGCGACTGCCGCTATGTTGAAGACAACTACGCGACGAAAGAAGACGCGAAGCGCGCAATGGACGTTTACTGCCACCGTCTGGCGAAATACATCGGTGCCTACACTGCGCTGATGGATGGTCGTCt                                                                                       <  1:1043471/127‑1 (MQ=255)

                                                        ccAGCGACTGCCGCTATGTTGAAGACAACTACGCGACGAAAGAAGACGCGAAGCGCGCAATGGACGTTTACTGCCACCGTCTGGCGAAATACATCGGTGCCTACACTGCGCTGATGGATGGTCGTCTGGACGCTGTTGTa                                                                          <  2:1234937/140‑1 (MQ=255)

                                                        ccAGCGACTGCCGCTATGTTGAAGACAACTACGCGACGAAAGAAGACGCGAAGCGCGCAATGGACGTTTACTGCCACCGTCTGGCGAAATACATCGGTGCCTACACTGCGCTGATGGATGGTCGTCTGGACGCTGTTGTa                                                                          <  2:1507934/140‑1 (MQ=255)

                                                          aGCGACTGCCGCTATGTTGAAGACAACTACGCGACGAAAGAAGACGCGAAGCGCGCAATGGACGTTTACTGCCACCGTCTGGCGAAATACATCGGTGCCTACACTGCGCTGATGGATGGTCGTCTGGACGCTGTTGTAtt                                                                        >  2:819712/1‑140 (MQ=255)

                                                           gCGACTGCCGCTATGTTGAAGACAACTACGCGACGAAAGAAGACGCGAAGCGCGCAATGGACGTTTACTGTCACCGTCTGGCGAAATACATCGGTGCCTACACTGCGCTGATGGATGGTCGTCTGGACGCTGTTGTATTc                                                                       <  2:453154/140‑1 (MQ=255)

                                                            cGACTGCCGCTATGTTGAAGACAACTACGCGACGAAAGAAGACGCGAAGCGCGCAATGGACGTTTACTGCCACCGTCTGGCGAAATACATCGGTGCCTACACTGCGCTGATGGATGGTCGTCTGGACGCTGTTGTATTCa                                                                      <  1:921908/140‑1 (MQ=255)

                                                               cTGCCGCTATGTTGAAGACAACTACGCGACGAAAGAAGACGCGAAGCGCGCAATGGACGTTTACTGCCACCGTCTGGCGAAATACATCGGTGCCTACACTGCGCTGATGGATGGTCGTCTGGACGCTGTTGTATTCACtg                                                                   >  2:763564/1‑140 (MQ=255)

                                                                            gAAGACAACTACGCGACGAAAGAAGACGCGAAGCGCGCAATGGACGTTTACTGCCACCGTCTGGCGAAATACATCGGTGCCTACACTGCGCTGATGGATGGTCGTCTGGACGCTGTTGTATTCACTGGTGGTATCGGTGa                                                      <  1:267650/140‑1 (MQ=255)

                                                                               gACAACTACGCGACGAAAGAAGACGCGAAGCGCGCAATGGACGTTTACTGCCACCGTCTGGCGAAATACATCGGTGCCTACACTGCGCTGATGGATGGTCGTCTGGACGCTGTTGTATTCACTGGTGGTATCGGTGaaaa                                                   <  1:763564/140‑1 (MQ=255)

                                                                                 cAACTACGCGACGAAAGAAGACGCGAAGCGCGCAATGGACGTTTACTGCCACCGTCTGGCGAAATACATCGGTGCCTACACTGCGCTGATGGATGGTCGTCTGGACGCTGTTGTATTCACTGGTGGTATCGGTGAAAATg                                                 <  1:819712/140‑1 (MQ=255)

                                                                                  aaCTACGCGACGAAAGAAGACGCGAAGCGCGCAATGGACGTTTACTGCCACCGTCTGGCGAAATACATCGGTGCCTACACTGCGCTGATGGATGGTCGTCTGGACGCTGTTGTATTCACTGGTGGTATCGGTGAAAATGc                                                >  1:1037535/1‑140 (MQ=255)

                                                                                  aaCTACGCGACGAAAGAAGACGCGAAGCGCGCAATGGACGTTTACTGCCACCGTCTGGCGAAATACATCGGTGCCTACACTGCGCTGATGGATGGTCGTCTGGACGCTGTTGTATTCACTGGTGGTATCGGTGAAAATGc                                                >  1:1623738/1‑140 (MQ=255)

                                                                                    cTACGCGACGAAAGAAGACGCGAAGCGCGCAATGGACGTTTACTGCCACCGTCTGGCGAAATACATCGGTGCCTACACTGCGCTGATGGATGGTCGTCTGGACGCTGTTGTATTCACTGGTGGTATCGGTGAAAATGccc                                              >  1:323667/1‑139 (MQ=255)

                                                                                    cTACGCGACGAAAGAAGACGCGAAGCGCGCAATGGACGTTTACTGCCACCGTCTGGCGAAATACATCGGTGCCTACACTGCGCTGATGGATGGTCGTCTGGACGCTGTTGTATTCACTGGTGGTATCGGTGAAAATGCCg                                              >  1:1608285/1‑140 (MQ=255)

                                                                                      aCGCGACGAAAGAAGACGCGAAGCGCGCAATGGACGTTTACTGCCACCGTCTGGCGAAATACATCGGTGCCTACACTGCGCTGATGGATGGTCGTCTGGACGCTGTTGTATTCACTGGTGGTATCGGTGAAAATGCCGCa                                            <  2:142173/140‑1 (MQ=255)

                                                                                        gcgACGAAAGAAGACGCGAAGCGCGCAATGGACGTTTACTGCCACCGTCTGGCGAAATACATCGGTGCCTACACTGCGCTGATGGATGGTCGTCTGGACGCTGTTGTATTCACTGGTGGTATCGGTGAAAATGCCGCAAt                                          <  2:885884/140‑1 (MQ=255)

                                                                                        gcgACGAAAGAAGACGCGAAGCGCGCAATGGACGTTTACTGCCACCGTCTGGCGAAATACATCGGTGCCTACACTGCGCTGATGGATGGTCGTCTGGACGCTGTTGTATTCACTGGTGGTATCGGTGAAAATGCCGCAAt                                          <  2:1440017/140‑1 (MQ=255)

                                                                                        gcgACGAAAGAAGACGCGAAGCGCGCAATGGACGTTTACTGCCACCGTCTGGCGAAATACATCGGTGCCTACACTGCGCTGATGGATGGTCGTCTGGACGCTGTTGTATTCACTGGTGGTATCGGTGAAAATGCCGCAAt                                          <  1:1548515/140‑1 (MQ=255)

                                                                                        gcgACGAAAGAAGACGCGAAGCGCGCAATGGACGTTTACTGCCACCGTCTGGCGAAATACATCGGTGCCTACACTGCGCTGATGGATGGTCGTCTGGACGCTGTTGTATTCACTGGTGGTATCGGTGAAAAAGCCGCAAt                                          <  1:1485285/140‑1 (MQ=255)

                                                                                              aaaGAAGACGCGAAGCGCGCAATGGACGTTTACTGCCACCGTCTGGCGAAATACATCGGTGCCTACACTGCGCTGATGGATGGTCGTCTGGACGCTGTTGTATTCACTGGTGGTATCGGTGAAAATGCCGCAATGGTTCg                                    <  2:1617045/140‑1 (MQ=255)

                                                                                                  aagaCGCGAAGCGCGCAATGGACGTTTACTGCCACCGTCTGGCGAAATACATCGGTGCCTACACTGCGCTGATGGATGGTCGTCTGGACGCTGTTGTATTCACTGGTGGTATCGGTGAAAATGCCGCAATGGTTCGTGaa                                <  1:11456/140‑1 (MQ=255)

                                                                                                       gcgAAGCGCGCAATGGACGTTTACTGCCACCGTCTGGCGAAATACATCGGTGCCTACACTGCGCTGATGGATGGTCGTCTGGACGCTGTTGTATTCACTGGTGGTATCGGTGAAAATGCCGCAATGGTTCGTGAACTGtc                           <  2:531369/140‑1 (MQ=255)

                                                                                                             cgcgcAATGGACGTTTACTGCCACCGTCTGGCGAAATACATCGGTGCCTACACTGCGCTGATGGATGGTCGTCTGGACGCTGTTGTATTCACTGGTGGTATCGGTGAAAATGCCGCAATGGTTCGTGAACTGTCTCTggg                     <  2:1623738/140‑1 (MQ=255)

                                                                                                             cgcgcAATGGACGTTTACTGCCACCGTCTGGCGAAATACATCGGTGCCTACACTGCGCTGATGGATGGTCGTCTGGACGCTGTTGTATTCACTGGTGGTATCGGTGAAAATGCCGCAATGGTTCGTGAACTGTCTCTggg                     <  1:1602901/140‑1 (MQ=255)

                                                                                                                       aCGTTTACTGCCACCGTCTGGCGAAATACATCGGTGCCTACACTGCGCTGATGGATGGTCGTCTGGACGCTGTTGTATTCACTGGTGGTATCGGTGAAAATGCCGCAATGGTTCGTGAACTGTCTCTGGGCAAACTGGGc           >  2:1067608/1‑140 (MQ=255)

                                                                                                                            tACTGCCACCGTCTGGCGAAATACATCGGTGCCTACACTGCGCTGATGGATGGTCGTCTGGACGCTGTTGTATTCACTGGTGGTATCGGTGAAAATGCCGCAATGGTTCGTGAACTGTCTCTGGGCAAACTGGGCGTGCt      <  1:757587/140‑1 (MQ=255)

                                                                                                                               tGCCACCGTCTGGCGAAATACATCGGTGCCTACACTGCGCTGATGGATGGTCGTCTGGACGCTGTTGTATTCACTGGTGGTATCGGTGAAAATGCCGCAATGGTTCGTGAACTGTCTCTGGGCAAACTGGGCGTGCTggg   >  1:578019/1‑140 (MQ=255)

                                                                                                                               tGCCACCGTCTGGCGAAATACATCGGTGCCTACACTGCGCTGATGGATGGTCGTCTGGACGCTGTTGTATTCACTGGTGGTATCGGTGAAAATGCCGCAATGGTTCGTGAACTGTCTCTGGGCAAACTGGGCGTGCTggg   <  2:1348017/140‑1 (MQ=255)

                                                                                                                                gCCACCGTCTGGCGAAATACATCGGTGCCTACACTGCGCTGATGGATGGTCGTCTGGACGCTGTTGTATTCACTGGTGGTATCGGTGAAAATGCCGCAATGGTTCGTGAACTGTCTCTGGGCAAACTGGGCGTGCTGGGc  >  1:485705/1‑140 (MQ=255)

CGCAATCAACAAACTGCTGACCAAAGAGTCTGGCCTGCTGGGTCTGACCGAAGTGACCAGCGACTGCCGCTATGTTGAAGACAACTACGCGACGAAAGAAGACGCGAAGCGCGCAATGGACGTTTACTGCCACCGCCTGGCGAAATACATCGGTGCCTACACTGCGCTGATGGATGGTCGTCTGGACGCTGTTGTATTCACTGGTGGTATCGGTGAAAATGCCGCAATGGTTCGTGAACTGTCTCTGGGCAAACTGGGCGTGCTGGGC  >  NC_000913/2414261‑2414528

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

N/A