Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A7 F28 I1 R1	183	98.6	3427438	96.9%	3321187	138.7

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,630,207	T→C	V139A (GTG→GCG)	yfgH →	lipoprotein YfgH

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,630,207	0	T	C	100.0%	250.1 / NA	67	V139A (GTG→GCG)	yfgH	lipoprotein YfgH
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (35/32); total (35/32)

TTCCGGAACGACGGCAGGTGCAGTTGGCGGCGGAGCTGTAGGCGCGGCAGCGGGTTCTATGGTGAATGATAAAACCTTAGTGGAAGGTGTTTCTTTAACCTATAAGGAAGGCACCAAAGTGTATACCTCTACCCAGGTGGGTAAAGAGTGCCAGTTTACGACAGGTTTAGCCGTTGTTATTACCACGACGTATAACGAAACGCGTATTCAGCCAAATACCAAATGTCCTGAAAAGAGCTAATAATCAGGAGGAGTCATGAAGAAAGTTT  >  NC_000913/2630070‑2630338

ttCCGGAACGACGGCAGGTGCAGTTGGCGGCGGAGCTGTAGGCGCGGCAGCGGGTTCTATGGTGAATGATAAAACCTTAGTGGAAGGTGTTTCTTTAACCTATAAGGAAGGCACCAAAGTGTATACCTCTACCCAGGCgg                                                                                                                                   >  1:246665/1‑140 (MQ=255)

           cgGCAGGTGCAGTTGGCGGCGGAGCTGTAGGCGCGGCAGCGGGTTCTATGGTGAATGATAAAACCTTAGTGGAAGGTGTTTCTTTAACCTATAAGGAAGGCACCAAAGTGTATACCTCTACCCAGGCGGGTAAAGAGTGc                                                                                                                        >  1:1435951/1‑140 (MQ=255)

           cgGCAGGTGCAGTTGGCGGCGGAGCTGTAGGCGCGGCAGCGGGTTCTATGGTGAATGATAAAACCTTAGTGGAAGGTGTTTCTTTAACCTATAAGGAAGGCACCAAAGTGTATACCTCTACCCAGGCGGGTAAAGAGTGc                                                                                                                        <  1:1536664/140‑1 (MQ=255)

                   gCAGTTGGCGGCGGAGCTGTAGGCGCGGCAGCGGGTTCTATGGTGAATGATAAAACCTTAGTGGAAGGTGTTTCTTTAACCTATAAGGAAGGCACCAAAGTGTATACCTCTACCCAGGCGGGTAAAGAGTGCCAGTTTAc                                                                                                                >  2:1222672/1‑140 (MQ=255)

                   gCAGTTGGCGGCGGAGCTGTAGGCGCGGCAGCGGGTTCTATGGTGAATGATAAAACCTTAGTGGAAGGTGTTTCTTTAACCTATAAGGAAGGCACCAAAGTGTATACCTCTACCCAGGCGGGGAAAGAGGGCCAGTTTAc                                                                                                                >  2:603996/1‑140 (MQ=255)

                    cAGTTGGCGGCGGAGCTGTAGGCGCGGCAGCGGGTTCTATGGTTAATGATAAAACCTTAGTGACAGGGGTTTCTTTAACCTATAAGGAAGGCACCAAAGTGTATACCTCTACCCAGGCGGGTGAAAAGGGCCAGGTTACg                                                                                                               >  2:1524045/1‑140 (MQ=255)

                    cAGTTGGCGGCGGAGCTGTAGGCGCGGCAGCGGGTTCTATGGTGAATGATAAAACCTTAGTGGAAGGTGTTTCTTTAACCTATAAGGAAGGCACCAAAGTGTATACCTCTACCCAGGCGGGTAAAGAGTGCCAGTTTACg                                                                                                               >  2:602222/1‑140 (MQ=255)

                    cAGTTGGCGGCGGAGCTGTAGGCGCGGCAGCGGGTTCTATGGTGAATGATAAAACCTTAGTGGAAGGTGTTTCTTTAACCTATAAGGAAGGCACCAAAGTGTATACCTCTACCCAGGCGGGTAAAGAGTGCCAGTTTACg                                                                                                               >  1:58062/1‑140 (MQ=255)

                    aaGTTGGCGGCGGAGCTGTAGGCGCGGCAGCGGGTTCTATGGTGAATGATAAAACCTTAGTGGAAGGTGTTTCTTTAACCTATAAGGAAGGCACCAAAGTGTATACCTCTACCCAGGCGGGTAAAGAGTGCCAGTTTACg                                                                                                               >  1:1043537/2‑140 (MQ=255)

                     aGTTGGCGGCGGAGCTGTAGGCGCGGCAGCGGGTTCTATGGTGAATGATAAAACCTTAGTGGAAGGTGTTTCTTTAACCTATAAGGAAGGCACCAAAGTGTATACCTCTACCCAGGCGGGTAAAGAGTGCCAGTTTACGa                                                                                                              <  2:1315242/140‑1 (MQ=255)

                     aGTTGGCGGCGGAGCTGTAGGCGCGGCAGCGGGTTCTATGGTGAATGATAAAACCTTAGTGGAAGGTGTTTCTTTAACCTATAAGGAAGGCACCAAAGTGTATACCTCTACCCAGGCGGGTAAAGAGTGCCAGTTTACGa                                                                                                              <  2:223185/140‑1 (MQ=255)

                     aGTTGGCGGCGGAGCTGTAGGCGCGGCAGCGGGTTCTATGGTGAATGATAAAACCTTAGTGGAAGGTGTTTCTTCAACCTATAAGGAAGGCACCAAAGTGTATACCTCTACCCAGGCGGGTAAAGAGTGCCAGTTTACGa                                                                                                              <  2:1505314/140‑1 (MQ=255)

                      gTTGGCGGCGGAGCTGTAGGCGCGGCAGCGGGTTCTATGGTGAATGATAAAACCTTAGTGGAAGGTGTTTCTTTAACCTATAAGGAAGGCACCAAAGTGTATACCTCTACCCAGGCGGGTAAAGAGTGCCAGTTTACGAc                                                                                                             <  2:274769/140‑1 (MQ=255)

                        tGGCGGCGGAGCTGTAGGCGCGGCAGCGGGTTCTATGGTGAATGATAAAACCTTAGTGGAAGGTGTTTCTTTAACCTATAAGGAAGGCACCAAAGTGTATACCTCTACCCAGGCGGGTAAAGAGTGCCAGTTTACGACAg                                                                                                           >  1:171683/1‑140 (MQ=255)

                          gcggcgGAGCTGTAGGCGCGGCAGCGGGTTCTATGGTGAATGATAAAACCTTAGTGGAAGGTGTTTCTTTAACCTATAAGGAAGGCACCAAAGTGTATACCTCTACCCAGGCGGGTAAAGAGTGCCAGTTTACGACAGGt                                                                                                         >  1:714380/1‑140 (MQ=255)

                            ggcggAGCTGTAGGCGCGGCAGCGGGTTCTATGGTGAATGATAAAACCTTAGTGGAAGGTGTTTCTTTAACCTATAAGGAAGGCACCAAAGTGTATACCTCTACCCAGGCGGGTAAAGAGTGCCAGTTTACGACAGGttt                                                                                                       >  2:447103/1‑140 (MQ=255)

                            ggcggAGCTGTAGGCGCGGCAGCGGGTTCTATGGTGAATGATAAAACCTTAGTGGAAGGTGTTTCTTTAACCTATAAGGAAGGCACCAAAGTGTATACCTCTACCCAGGCGGGTAAAGAGTGCCAGTTTACGACAGGttt                                                                                                       >  2:132506/1‑140 (MQ=255)

                            ggcggAGCTGTAGGCGCGGCAGCGGGTTCTATGGTGAATGATAAAACCTTAGTGGAAGGTGTTTCTTTAACCTATAAGGAAGGCACCAAAGTGTATACCTCTACCCAGGCGGGTAAAGAGTGCCAGTTTACGACAGGttt                                                                                                       >  1:794039/1‑140 (MQ=255)

                                gAGCTGTAGGCGCGGCAGCGGGTTCTATGGTGAATGATAAAACCTTAGTGGAAGGTGTTTCTTTAACCTATAAGGAAGGCACCAAAGTGTATACCTCTACCCAGGCGGGTAAAGAGTGCCAGTTTACGACAGGTTTAGcc                                                                                                   <  2:1219914/140‑1 (MQ=255)

                                 aGCTGTAGGCGCGGCAGCGGGTTCTATGGTGAATGATAAAACCTTAGTGGAAGGTGTTTCTTTAACCTATAAGGAAGGCACCAAAGTGTATACCTCTACCCAGGCGGGTAAAGAGTGCCAGTTTACGACAGGTTTAGCCg                                                                                                  <  2:919478/140‑1 (MQ=255)

                                 aGCTGTAGGCGCGGCAGCGGGTTCTATGGTGAATGATAAAACCTTAGTGGAAGGTGTTTCTTTAACCTATAAGGAAGGCACCAAAGTGTATACCTCTACCCAGGCGGGTAAAGAGTGCCAGTTTACGACAGGTTTAGCCg                                                                                                  <  2:1305792/140‑1 (MQ=255)

                                   cTGTAGGCGCGGCAGCGGGTTCTATGGTGAATGATAAAACCTTAGTGGAAGGTGTTTCTTTAACCTATAAGGAAGGCACCAAAGTGTATACCTCTACCCAGGCGGGTAAAGAGTGCCAGTTTACGACAGGTTTAGCCgtt                                                                                                <  1:602222/140‑1 (MQ=255)

                                           gcgGCAGCGGGTTCTATGGTGAATGATAAAACCTTAGTGGAAGGTGTTTCTTTAACCTATAAGGAAGGCACCAAAGTGTATACCTCTACCCAGGCGGGTAAAGAGTGCCAGTTTACGACAGGTTTAGCCGTTGTTATTAc                                                                                        >  2:476160/1‑140 (MQ=255)

                                           gcgGCAGCGGGTTCTATGGTGAATGATAAAACCTTAGTGGAAGGTGTTTCTTTAACCTATAAGGAAGGCACCAAAGTGTATACCTCTACCCAGGCGGGTAAAGAGTGCCAGTTTACGACAGGTTTAGCCGTTGTTATTAc                                                                                        >  1:771846/1‑140 (MQ=255)

                                             ggCAGCGGGTTCTATGGTGAATGATAAAACCTTAGTGGAAGGTGTTTCTTTAACCTATAAGGAAGGCACCAAAGTGTATACCTCTACCCAGGCGGGTAAAGAGTGCCAGTTTACGACAGGTTTAGCCGTTGTTATTACCa                                                                                      >  2:1269234/1‑140 (MQ=255)

                                             ggCAGCGGGTTCTATGGTGAATGATAAAACCTTAGTGGAAGGTGTTTCTTTAACCTATAAGGAAGGCACCAAAGTGTATACCTCTACCCAGGCGGGTAAAGAGTGCCAGTTTACGACAGGTTTAGCCGTTGTTATTACCa                                                                                      <  2:246665/140‑1 (MQ=255)

                                              gCAGCGGGTTCTATGGTGAATGATAAAACCTTAGTGGAAGGTGTTTCTTTAACCTATAAGGAAGGCACCAAAGTGTATACCTCTACCCAGGCGGGTAAAGAGTGCCAGTTTACGACAGGTTTAGCCGTTGTTATTACCac                                                                                     <  2:771846/140‑1 (MQ=255)

                                               cAGCGGGTTCTATGGTGAATGATAAAACCTTAGTGGAAGGTGTTTCTTTAACCTATAAGGAAGGCACCAAAGTGTATACCTCTACCCAGGCGGGTAAAGAGTGCCAGTTTACGACAGGTTTAGCCGTTGTTATTACCacg                                                                                    <  2:171683/140‑1 (MQ=255)

                                               cAGCGGGTTCTATGGTGAATGATAAAACCTTAGTGGAAGGTGTTTCTTTAACCTATAAGGAAGGCACCAAAGTGTATACCTCTACCCAGGCGGGTAAAGAGTGCCAGTTTACGACAGGTTTAGCCGTTGTTATTACCacg                                                                                    <  2:714380/140‑1 (MQ=255)

                                               cAGCGGGTTCTATGGTGAATGATAAAACCTTAGTGGAAGGTGTTTCTTTAACCTATAAGGAAGGCACCAAAGTGTATACCTCTACCCAGGCGGGTAAAGAGTGCCAGTTTACGACAGGTTTAGCCGTTGTTATTACCacg                                                                                    <  2:1043537/140‑1 (MQ=255)

                                               cAGCGGGTTCTATGGTGAATGATAAAACCTTAGTGGAAGGTGTTTCTTTAACCTATAAGGAAGGCACCAAAGTGTATACCTCTACCCAGGCGGGTAAAGAGTGCCAGTTTACGACAGGTTTAGCCGTTGTTATTACCacg                                                                                    <  2:1207031/140‑1 (MQ=255)

                                               cAGCGGGTTCTATGGTGAATGATAAAACCTTAGTGGAAGGTGTTTCTTTAACCTATAAGGAAGGCACCAAAGTGTATACCTCTACCCAGGCGGGTAAAGAGTGCCAGTTTACGACAGGTTTAGCCGTTGTTATTACCacg                                                                                    <  1:1194609/140‑1 (MQ=255)

                                               cAGCGGGTTCTATGGTGAATGATAAAACCTTAGTGGAAGGTGTTTCTTTAACCTATAAGGAAGGCACCAAAGTGTATACCTCTACCCAGGCGGGTAAAGAGTGCCAGTTTACGACAGGTTTAGCCGTTGTTATTACCacg                                                                                    <  1:1222672/140‑1 (MQ=255)

                                               cAGCGGGTTCTATGGTGAATGATAAAACCTTAGTGGAAGGTGTTTCTTTAACCTATAAGGAAGGCACCAAAGTGTATACCGCTTCTCAGGCGGGTAAAGAGTGCCAGTTTACGACAGGTTTAGCCGTTGTTATTACCacg                                                                                    <  1:843741/140‑1 (MQ=255)

                                                         tATGGTGAATGATAAAACCTTAGTGGAAGGTGTTTCTTTAACCTATAAGGAAGGCACCAAAGTGTATACCTCTACCCAGGCGGGTAAAGAGTGCCAGTTTACGACAGGTTTAGCCGTTGTTATTACCACGACGTATAACg                                                                          >  1:1410505/1‑140 (MQ=255)

                                                               gAATGATAAAACCTTAGTGGAAGGTGTTTCTTTAACCTATAAGGAAGGCACCAAAGTGTATACCTCTACCCAGGCGGGTAAAGAGTGCCAGTTTACGACAGGTTTAGCCGTTGTTATTACCACGACGTATAACGAAAcgc                                                                    >  2:29709/1‑140 (MQ=255)

                                                                aaTGATAAAACCTTAGTGGAAGGTGTTTCTTTAACCTATAAGGAAGGCACCAAAGTGTATACCTCTACCCAGGCGGGTAAAGAGTGCCAGTTTACGACAGGTTTAGCCGTTGTTATTACCACGACGTATAACGAAAcgcg                                                                   >  2:1221987/1‑140 (MQ=255)

                                                                    aTAAAACCTTAGTGGAAGGTGTTTCTTTAACCTATAAGGAAGGCACCAAAGTGTATACCTCTACCCAGGCGGGTAAAGAGTGCCAGTTTACGACAGGTTTAGCCGTTGTTATTACCACGACGTATAACGAAACGCGTAtt                                                               <  1:1524045/140‑1 (MQ=255)

                                                                        aaCCTTAGTGGAAGGTGTTTCTTTAACCTATAAGGAAGGCACCAAAGTGTATACCTCTACCCAGGCGGGTAAAGAGTGCCAGTTTACGACAGGTTTAGCCGTTGTTATTACCACGACGTATAACGAAACGCGTATTCAGc                                                           <  1:1221987/140‑1 (MQ=255)

                                                                              aGTGGAAGGTGTTTCTTTAACCTATAAGGAAGGCACCAAAGTGTATACCTCTACCCAGGCGGGTAAAGAGTGCCAGTTTACGACAGGTTTAGTCGTTGTTATTACCACGACGTATAACGAAACGCGTATTCAGCCAAATa                                                     >  1:178952/1‑140 (MQ=255)

                                                                              aGTGGAAGGTGTTTCTTTAACCTATAAGGAAGGCACCAAAGTGTATACCTCTACCCAGGCGGGTAAAGAGTGCCAGTTTACGACAGGTTTAGCCGTTGTTATTACCACGACGTATAACGAAACGCGTATTCAGCCAAATa                                                     >  2:65366/1‑140 (MQ=255)

                                                                                  gAAGGTGTTTCTTTAACCTATAAGGAAGGCACCAAAGTGTATACCTCTACCCAGGCGGGTAAAGAGTGCCAGTTTACGACAGGTTTAGCCGTTGTTATTACCACGACGTATAACGAAACGCGTATTCAGCCAAATACCaa                                                 <  1:447103/140‑1 (MQ=255)

                                                                                    aGGTGTTTCTTTAACCTATAAGGAAGGCACCAAAGTGTATACCTCTACCCAGGCGGGTAAAGAGTGCCAGTTTACGACAGGTTTAGCCGTTGTTATTACCACGACGTATAACGAAACGCGTATTCAGCCAAATACCAAAt                                               <  1:476160/140‑1 (MQ=255)

                                                                                       tgtTTCTTTAACCTATAAGGAAGGCACCAAAGTGTATACCTCTACCCAGGCGGGTAAAGAGTGCCAGTTTACGACAGGTTTAGCCGTTGTTATTACCACGACGTATAACGAAACGCGTATTCAGCCAAATACCAAATGTc                                            <  2:789999/140‑1 (MQ=255)

                                                                                         tttCTTTAACCTATAAGGAAGGCACCAAAGTGTATACCTCTACCCAGGCGGGTAAAGAGTGCCAGTTTACGACAGGTTTAGCCGTTGTTATTACCACGACGTATAACGAAACGCGTATTCAGCCAAATACCAAATGTCCt                                          >  1:67079/1‑140 (MQ=255)

                                                                                            cTTTAACCTATAAGGAAGGCACCAAAGTGTATACCTCTACCCAGGCGGGTAAAGAGTGCCAGTTTACGACAGGTTTAGCCGTTGTTATTACCACGACGTATAACGAAACGCGTATTCAGCCAAATACCAAATGTCCTGaa                                       >  1:15085/1‑140 (MQ=255)

                                                                                             tttAACCTATAAGGAAGGCACCAAAGTGTATACCTCTACCCAGGCGGGTAAAGAGTGCCAGTTTACGACAGGTTTAGCCGTTGTTATTACCACGACGTATAACGAAACGCGTATTCAGCCAAATACCAAATGTCCTGaaa                                      <  1:65366/140‑1 (MQ=255)

                                                                                              ttAACCTATAAGGAAGGCACCAAAGTGTATACCTCTACCCAGGCGGGTAAAGAGTGCCAGTTTACGACAGGTTTAGCCGTTGTTATTACCACGACGTATAACGAAACGCGTATTCAGCCAAATACCAAATGTCCTGaaaa                                     <  1:132506/140‑1 (MQ=255)

                                                                                               tAACCTATAAGGAAGGCACCAAAGTGTATACCTCTACCCAGGCGGGTAAAGAGTGCCAGTTTACGACAGGTTTAGCCGTTGTTATTACCACGACGTATAACGAAACGCGTATTCAGCCAAATACCAAATGTCCTGAAAag                                    >  1:1477583/1‑140 (MQ=255)

                                                                                                   cTATAAGGAAGGCACCAAAGTGTATACCTCTACCCAGGCGGGTAAAGAGTGCCAGTTTACGACAGGTTTAGCCGTTGTTATTACCACGACGTATAACGAAACGCGTATTCAGCCAAATACCAAATGTCCTGAAAAGAGCt                                <  2:794039/140‑1 (MQ=255)

                                                                                                    tataAGGAAGGCACCAAAGTGTATACCTCTACCCAGGCGGGTAAAGAGTGCCAGTTTACGACAGGTTTAGCCGTTGTTATTACCACGACGTATAACGAAACGCGTATTCAGCCAAATACCAAATGTCCTGAAAAGAGCta                               <  1:29709/140‑1 (MQ=255)

                                                                                                            aggCACCAAAGTGTATACCTCTACCCAGGCGGGTAAAGAGTGCCAGTTTACGACAGGTTTAGCCGTTGTTATTACCACGACGTATAACGAAACGCGTATTCAGCCAAATACCAAATGTCCTGAAAAGAGCt                                <  1:28233/131‑1 (MQ=255)

                                                                                                            aggCACCAAAGTGTATACCTCTACCCAGGCGGGTAAAGAGTGCCAGTTTACGACAGGTTTAGCCGTTGTTATTACCACGACGTATAACGAAACGCGTATTCAGCCAAATACCAAATGTCCTGAAAAGAGCt                                >  2:28233/1‑131 (MQ=255)

                                                                                                             ggCACCAAAGTGTATACCTCTACCCAGGCGGGTAAAGAGTGCCAGTTTACGACAGGTTTAGCCGTTGTTATTACCACGACGTATAACGAAACGCGTATTCAGCCAAATACCAAATGTCCTGAAAAGAGCTAATAATCagg                      >  1:1523689/1‑140 (MQ=255)

                                                                                                              gCACCAAAGTGTATACCTCTACCCAGGCGGGTAAAGAGTGCCAGTTTACGACAGGTTTAGCCGTTGTTATTACCACGACGTATAACGAAACGCGTATTCAGCCAAATACCAAATGTCCTGAAAAGAGCTAATAATCagga                     >  2:641523/1‑140 (MQ=255)

                                                                                                               cACCAAAGTGTATACCTCTACCCAGGCGGGTAAAGAGTGCCAGTTTACGACAGGTTTAGCCGTTGTTATTACCACGACGTATAACGAAACGCGTATTCAGCCAAATACCAAATGTCCTGAAAAGAGCTAATAATCaggag                    <  2:1410505/140‑1 (MQ=255)

                                                                                                                aCCAAAGTGTATACCTCTACCCAGGCGGGTAAAGAGTGCCAGTTTACGACAGGTTTAGCCGTTGTTATTACCACGACGTATAACGAAACGCGTATTCAGCCAAATACCAAATGTCCTGAAAAGAGCTAATAATCaggagg                   >  2:830618/1‑140 (MQ=255)

                                                                                                                aCCAAAGTGTATACCTCTACCCAGGCGGGTAAAGAGTGCCAGTTTACGACAGGTTTAGCCGTTGTTATTACCACGACGTATAACGAAACGCGTATTCAGCCAAATACCAAATGTCCTGAAAAGAGCTAATAATCaggagg                   >  1:1511145/1‑140 (MQ=255)

                                                                                                                aCCAAAGTGTATACCTCTACCCAGGCGGGTAAAGAGTGCCAGTTTACGACAGGTTTAGCCGTTGTTATTACCACGACGTATAACGAAACGCGTATTCAGCCAAATACCAAATGTCCTGAAAAGAGCTAATAATCaggag                    <  2:1467233/139‑1 (MQ=255)

                                                                                                                aCCAAAGTGTATACCTCTACCCAGGCGGGTAAAGAGTGCCAGTTTACGACAGGTTTAGCCGTTGTTATTACCACGACGTATAACGAAACGCGTATTCAGCCAAATACCAAATGTCCTGAAAAGAGCTAATAATCaggag                    >  1:1467233/1‑139 (MQ=255)

                                                                                                                         tataCCTCTACCCAGGCGGGTAAAGAGTGCCAGTTTACGACAGGTTTAGCCGTTGTTATTACCACGACGTATAACGAAACGCGTATTCAGCCAAATACCAAATGTCCTGAAAAGAGCTAATAATCAGGAGGAGTCATgaa          >  1:1432114/1‑140 (MQ=255)

                                                                                                                              ctctACCCAGGCGGGTAAAGAGTGCCAGTTTACGACAGGTTTAGCCGTTGTTATTACCACGACGTATAACGAAACGCGTATTCAGCCAAATACCAAATGTCCTGAAAAGAGCTAATAATCAGGAGGAGTCATGAAGAAAg     >  2:81393/1‑140 (MQ=255)

                                                                                                                                 tACCCAGGCGGGTAAAGAGTGCCAGTTTACGACAGGTTTAGCCGTTGTTATTACCACGACGTATAACGAAACGCGTATTCAGCCAAATACCAAATGTCCTGAAAAGAGCTAATAATCAggagga                  <  1:232654/124‑1 (MQ=255)

                                                                                                                                 tACCCAGGCGGGTAAAGAGTGCCAGTTTACGACAGGTTTAGCCGTTGTTATTACCACGACGTATAACGAAACGCGTATTCAGCCAAATACCAAATGTCCTGAAAAGAGCTAATAATCAggagga                  >  2:232654/1‑124 (MQ=255)

                                                                                                                                 tACCCAGGCGGGTAAAGAGTGCCAGTTTACGACAGGTTTAGCCGTTGTTATTACCACGACGTATAACGAAACGCGTATTCAGCCAAATACCAAATGTCCTGAAAAGAGCTAATAATCAGGAGGAGTCATGAAGAAAGttt  >  1:587365/1‑140 (MQ=255)

                                                                                                                                 tACCCAGGCGGGTAAAGAGTGCCAGTTTACGACAGGTTTAGCCGTTGTTATTACCACGACGTATAACGAAACGCGTATTCAGCCAAATACCAAATGTCCTGAAAAGAGCTAATAATCAGGAGGAGTCATGAAGAAAGttt  >  2:585464/1‑140 (MQ=255)

                                                                                                                                   cccAGGCGGGTAAAGAGTGCCAGTTTACGACAGGTTTAGCCGTTGTTATTACCACGACGTATAACGAAACGCGTATTCAGCCAAATACCAAATGTCCTGAAAAGAGCTAATAATCAGGAGGAGTCATgaa          <  1:1333203/130‑1 (MQ=255)

                                                                                                                                   cccAGGCGGGTAAAGAGTGCCAGTTTACGACAGGTTTAGCCGTTGTTATTACCACGACGTATAACGAAACGCGTATTCAGCCAAATACCAAATGTCCTGAAAAGAGCTAATAATCAGGAGGAGTCATgaa          >  2:1333203/1‑130 (MQ=255)

TTCCGGAACGACGGCAGGTGCAGTTGGCGGCGGAGCTGTAGGCGCGGCAGCGGGTTCTATGGTGAATGATAAAACCTTAGTGGAAGGTGTTTCTTTAACCTATAAGGAAGGCACCAAAGTGTATACCTCTACCCAGGTGGGTAAAGAGTGCCAGTTTACGACAGGTTTAGCCGTTGTTATTACCACGACGTATAACGAAACGCGTATTCAGCCAAATACCAAATGTCCTGAAAAGAGCTAATAATCAGGAGGAGTCATGAAGAAAGTTT  >  NC_000913/2630070‑2630338

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 15 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

N/A