Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A7 F28 I1 R1
|
183 |
98.6 |
3427438 |
96.9% |
3321187 |
138.7 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,901,604 |
A→G |
Y338C (TAC→TGC) |
yqcE → |
putative transport protein YqcE |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,901,604 | 0 | A | G | 100.0%
| 447.5
/ NA
| 118 | Y338C (TAC→TGC) | yqcE | putative transport protein YqcE |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (49/69); total (49/69) |
Only 100 of 118 total aligned reads displayed.
CAAATCCTTTCCGTACTCGGCCTGCTGACGTTAACTGCCCTGCTCGTCACGAACTCTAACCCGCAATCGGTCGCGATGGGGATTGGCCTGATTTTACTGCTGGGATTCACCTGTTACGCCTCACGCGGGCTGTACTGGGCCTGCCCTGGCGAAGCGAGAACACCGTCTTACATTATGGGCACCACGGTAGGTATTTGTTCGGTGATTGGATTCCTGCCGGATGTCTTCGTTTACCCAATTATCGGCCACTGGCAAGACACCCTGCCC > NC_000913/2901471‑2901737
|
cAAATCCTTTCCGTACTCGGCCTGCTGACGTTAACTGCCCTGCTCGTCACGAACTCTAACCCGCAATCGGTCGCGATGGGGATTGGCCTGATTTTACTGCTGGGATTCACCTGTTACGCCTCACGCGGGCTGTGCTGGGc < 1:336040/140‑1 (MQ=255)
cAAATCCTTTCCGTACTCGGCCTGCTGACGTTAACTGCCCTGCTCGTCACGAACTCTAACCCGCAATCGGTCGCGATGGGGATTGGCCTGATTTTACTGCTGGGATTCACCTGTTACGCCTCACGCGGGCTGTGCTGGGc < 1:1645266/140‑1 (MQ=255)
cAAATCCTTTCCGTACTCGGCCTGCTGACGTTAACTGCCCTGCTCGTCACGAACTCTAACCCGCAATCGGTCGCGATGGGGATTGGCCTGATTTTACTGCTGGGATTCACCTGTTACGCCTCACGCGGGCTGTGCTGGGc < 1:617311/140‑1 (MQ=255)
aaaTCCTTTCCGTACTCGGCCTGCTGACGTTAACTGCCCTGCTCGTCACGAACTCTAACCCGCAATCGGTCGCGATGGGGATTGGCCTGATTTTACTGCTGGGATTCACCTGTTACGCCTCACGCGGGCTGTGCTGGGcc < 1:542841/140‑1 (MQ=255)
ttCCGTACTCGGCCTGCTGACGTTAACTGCCCTGCTCGTCACGAACTCTAACCCGCAATCGGTCGCGATGGGGATTGGCCTGATTTTACTGCTGGGATTCACCTGTTACGCCTCACGCGGGCTGTGCTGGGCCTGCCCTg > 2:1600555/1‑140 (MQ=255)
ttCCGTACTCGGCCTGCTGACGTT‑ACTGCCCTGCTCGTCACGAACTCTAACCCGCAATCGGTCGCGATGGGGATTGGCCTGATTTTACTGCTGGGATTCACCTGTTACGCCTCACGCGGGCTGTGCTGGGCCTGCCCTgg > 1:1268155/1‑140 (MQ=255)
ttCAGTACTCGGCCTGCTGACGTTAACTGCCCTGCTCGTCACGAACTCTAACCCGCAATCGGTCGCGATGGGGATTGGCCTGATTTTACTGCTGGGATTCACCTGTTACGCCTCACGCGGGCTGTGCTGGGCCTGCCCTg > 2:352967/1‑140 (MQ=255)
tCCGTACTCGGCCTGCTGACGTTAACTGCCCTGCTCGTCACGAACTCTAACCCGCAATCGGTCGCGATGGGGATTGGCCTGATTTTACTGCTGGGATTCACCTGTTACGCCTCACGCGGGCTGTGCTGGGCCTGCCCTgg > 2:795735/1‑140 (MQ=255)
ccGTACTCGGCCTGCTGACGTTAACTGCCCTGCTCGTCACGAACTCTAACCCGCAATCGGTCGCGATGGGGATTGGCCTGATTTTACTGCTGGGATTCACCTGTTACGCCTCACGCGGGCTGTGCTGGGCCTGCCCTGGc < 1:1110471/140‑1 (MQ=255)
ccGTACTCGGCCTGCTGACGTTAACTGCCCTGCTCGTCACGAACTCTAACCCGCAATCGGTCGCGATGGGGATTGGCCTGATTTTACTGCTGGGATTCACCTGTTACGCCTCACGCGGGCTGTGCTGGGCCTGCCCTGGc < 2:740438/140‑1 (MQ=255)
tACTCGGCCTGCTGACGTTAACTGCCCTGCTCGTCACGAACTCTAACCCGCAATCGGTCGCGATGGGGATTGGCCTGATTTTACTGCTGGGATTCACCTGTTACGCCTCACGCGGGCTGTGCTGGGCCTGCCCTGGCGaa > 2:459194/1‑140 (MQ=255)
cTCGGCCTGCTGACGTTAACTGCCCTGCTCGTCACGAACTCTAACCCGCAATCGGTCGCGATGGGGATTGGCCTGATTTTACTGCTGGGATTCACCTGTTACGCCTCACGCGGGCTGTGCTGGGCCTGCCCTGGCGAAGc > 1:62128/1‑140 (MQ=255)
ccTGCTGACGTTAACTGCCCTGCTCGTCACGAACTCTAACCCGCAATCGGTCGCGATGGGGATTGGCCTGATTTTACTGCTGGGATTCACCTGTTACGCCTCACGCGGGCTGTGCTGGGCCTGCCCTGGCGAAGCGAGaa < 2:1348477/140‑1 (MQ=255)
ccTGCTGACGTTAACTGCCCTGCTCGTCACGAACTCTAACCCGCAATCGGTCGCGATGGGGATTGGCCTGATTTTACTGCTGGGATTCACCTGTTACGCCTCACGCGGGCTGTGCTGGGCCTGCCCTGGCGAAGCGAGaa > 1:551570/1‑140 (MQ=255)
tgctgACGTTAACTGCCCTGCTCGTCACGAACTCTAACCCGCAATCGGTCGCGATGGGGATTGGCCTGATTTTACTGCTGGGATTCACCTGTTACGCCTCACGCGGGCTGTGCTGGGCCTGCCCTGGCGAAGCGAGAaca < 1:73889/140‑1 (MQ=255)
tgctgACGTTAACTGCCCTGCTCGTCACGAACTCTAACCCGCAATCGGTCGCGATGGGGATTGGCCTGATTTTACTGCTGGGATTCACCTGTTACGCCTCACGCGGGCTGTGCTGGGCCTGCCCTGGCGAAGCGAGAaca < 1:1004155/140‑1 (MQ=255)
tgctgACGTTAACTGCCCTGCTCGTCACGAACTCTAACCCGCAATCGGTCGCGATGGGGATTGGCCTGATTTTACTGCTGGGATTCACCTGTTACGCCTCACGCGGGCTGTGCTGGGCCTGCCCTGGCGAAGCGAGAaca < 2:612535/140‑1 (MQ=255)
ctgACGTTAACTGCCCTGCTCGTCACGAACTCTAACCCGCAATCGGTCGCGATGGGGATTGGCCTGATTTTACTGCTGGGATTCACCTGTTACGCCTCACGCGGGCTGTGCTGGGCCTGCCCTGGCGAAGCGAGAACAcc < 2:959925/140‑1 (MQ=255)
gACGTTAACTGCCCTGCTCGTCACGAACTCTAACCCGCAATCGGTCGCGATGGGGATTGGCCTGATTTTACTGCTGGGATTCACCTGTTACGCCTCACGCGGGCTGTGCTGGGCCTGCCCTGGCGAAGCGAGAACACCGt < 2:1690165/140‑1 (MQ=255)
aCGTTAACTGCCCTGCTCGTCACGAACTCTAACCCGCAATCGGTCGCGATGGGGATTGGCCTGATTTTACTGCTGGGATTCACCTGTTACGCCTCACGCGGGCTGTGCTGGGCCTGCCCTGGCGAAGCGAGAACACCGTc < 1:1014086/140‑1 (MQ=255)
aCGTTAACTGCCCTGCTCGTCACGAACTCTAACCCGCAATCGGTCGCGATGGGGATTGGCCTGATTTTACTGCTGGGATTCACCTGTTACGCCTCACGCGGGCTGTGCTGGGCCTGCCCTGGCGAAGCGAGAACACCGTc < 1:181322/140‑1 (MQ=255)
cTGCCCTGCTCGTCACGAACTCTAACCCGCAATCGGTCGCGATGGGGATTGGCCTGATTTTACTGCTGGGATTCACCTGTTACGCCTCACGCGGGCTGTGCTGGGCCTGCCCTGGCGAAGCGAGAaca < 2:1198369/128‑1 (MQ=255)
cTGCCCTGCTCGTCACGAACTCTAACCCGCAATCGGTCGCGATGGGGATTGGCCTGATTTTACTGCTGGGATTCACCTGTTACGCCTCACGCGGGCTGTGCTGGGCCTGCCCTGGCGAAGCGAGAACACCGTCTTACAtt > 2:9590/1‑140 (MQ=255)
cccTGCTCGTCACGAACTCTAACCCGCAATCGGTCGCGATGGGGATTGGCCTGATTTTACTGCTGGGATTCACCTGTTACGCCTCACGCGGGCTGTGCTGGGCCTGCCCTGGCGAAGCGAGAaca > 2:1246845/1‑125 (MQ=255)
cccTGCTCGTCACGAACTCTAACCCGCAATCGGTCGCGATGGGGATTGGCCTGATTTTACTGCTGGGATTCACCTGTTACGCCTCACGCGGGCTGTGCTGGGCCTGCCCTGGCGAAGCGAGAaca < 1:1246845/125‑1 (MQ=255)
cccTGCTCGTCACGAACTCTAACCCGCAATCGGTCGCGATGGGGATTGGCCTGATTTTACTGCTGGGATTCACCTGTTACGCCTCACGCGGGCTGTGCTGGGCCTGCCCTGGCGAAGCGAGAACACCGTCTTACATTATg < 2:1346394/140‑1 (MQ=255)
ccTGCTCGTCACGAACTCTAACCCGCAATCGGTCGCGATGGGGATTGGCCTGATTTTACTGCTGGGATTCACCTGTTACGCCTCACGCGGGCTGTGCTGGGCCTGCCCTGGCGAAGCGAGAACACCGTCTTACATTAt < 2:1178233/138‑1 (MQ=255)
ccTGCTCGTCACGAACTCTAACCCGCAATCGGTCGCGATGGGGATTGGCCTGATTTTACTGCTGGGATTCACCTGTTACGCCTCACGCGGGCTGTGCTGGGCCTGCCCTGGCGAAGCGAGAACACCGTCTTACATTAt > 1:1178233/1‑138 (MQ=255)
ccTGCTCGTCACGAACTCTAACCCGCAATCGGTCGCGATGGGGATTGGCCTGATTTTACTGCTGGGATTCACCTGTTACGCCTCACGCGGGCTGTGCTGGGCCTGCCCTGGCGAAGCGAGAACACCGTCTTACATTATgg > 1:1287806/1‑140 (MQ=255)
cTGCTCGTCACGAACTCTAACCCGCAATCGGTCGCGATGGGGATTGGCCTGATTTTACTGCTGGGATTCACCTGTTACGCCTCACGCGGGCTGTGCTGGGCCTGCCCTGGCGAAGCGAGAACACCGTCtt < 2:427638/130‑1 (MQ=255)
cTGCTCGTCACGAACTCTAACCCGCAATCGGTCGCGATGGGGATTGGCCTGATTTTACTGCTGGGATTCACCTGTTACGCCTCACGCGGGCTGTGCTGGGCCTGCCCTGGCGAAGCGAGAACACCGTCtt > 1:427638/1‑130 (MQ=255)
gCTCGTCACGAACTCTAACCCGCAATCGGTCGCGATGGGGATTGGCCTGATTTTACTGCTGGGATTCACCTGTTACGCCTCACGCGGGCTGTGCTGGGCCTGCCCTGGCGAAGCGAGAACACCGTCTTACATTATGGGca > 1:323899/1‑140 (MQ=255)
gCTCGTCACGAACTCTAACCCGCAATCGGTCGCGATGGGGATTGGCCTGATTTTACTGCTGGGATTCACCTGTTACGCCTCACGCGGGCTGTGCTGGGCCTGCCCTGGCGAAGCGAGAACACCGTCTTACATTATGGGca < 2:848770/140‑1 (MQ=255)
cTCGTCACGAACTCTAACCCGCAATCGGTCGCGATGGGGATTGGCCTGATTTTACTGCTGGGATTCACCTGTTACGCCTCACGCGGGCTGTGCTGGGCCTGCCCTGGCGAAGCGAGAACACCGTCTTACATTATGGGcac > 1:653043/1‑140 (MQ=255)
cTCGTCACGAACTCTAACCCGCAATCGGTCGCGATGGGGATTGGCCTGATTTTACTGCTGGGATTCACCTGTTACGCCTCACGCGGGCTGTGCTGGGCCTGCCCTGGCGAAGCGAGAACACCGTCTTACATTATGGGcac > 1:985526/1‑140 (MQ=255)
cTCGTCACGAACTCTAACCCGCAATCGGTCGCGATGGGGATTGGCCTGATTTTACTGCTGGGATTCACCTGTTACGCCTCACGCGGGCTGTGCTGGGCCTGCCCTGGCGAAGCGAGAACACCGTCTTACATTATGGGcac > 1:1218973/1‑140 (MQ=255)
cTCGTCACGAACTCTAACCCGCAATCGGTCGCGATGGGGATTGGCCTGATTTTACTGCTGGGATTCACCTGTTACGCCTCACGCGGGCTGTGCTGGGCCTGCCCTGGCGAAGCGAGAACACCGTCTTACATTATGGGcac > 2:1278721/1‑140 (MQ=255)
cTCGTCACGAACTCTAACCCGCAATCGGTCGCGATGGGGATTGGCCTGATTTTACTGCTGGGATTCACCTGTTACGCCTCACGCGGGCTGTGCTGGGCCTGCCCTGGCGAAGCGAGAACACCGTCTTACATTATGGGcac < 1:1347878/140‑1 (MQ=255)
cTCGTCACGAACTCTAACCCGCAATCGGTCGCGATGGGGATTGGCCTGATTTTACTGCTGGGATTCACCTGTTACGCCTCACGCGGGCTGTGCTGGGCCTGCCCTGGCGAAGCGAGAACACCGTCTTACATTATGGGcac < 2:682990/140‑1 (MQ=255)
cTCGTCACGAACTCTAACCCGCAATCGGTCGCGATGGGGATTGGCCTGATTTTACTGCTGGGATTCACCTGTTACGCCTCACGCGGGCTGTGCTGGGCCTGCCCTGGCGAAGCGAGAACACCGTCTTACATTATGGGcac > 1:568036/1‑140 (MQ=255)
cTCGTCACGAACTCTAACCCGCAATCGGTCGCGATGGGGATTGGCCTGATTTTACTGCTGGGATTCACCTGTTACGCCTCACGCGGGCTGTGCTGGGCCTGCCCTGGCGAAGCGAGAACACCGTCTTACATTATGGGcac < 2:62128/140‑1 (MQ=255)
cGTCACGAACTCTAACCCGCAATCGGTCGCGATGGGGATTGGCCTGATTTTACTGCTGGGATTCACCTGTTACGCCTCACGCGGGCTGTGCTGGGCCTGCCCTGGCGAAGCGAGAACACCGTCTTACATTATGGGcacca < 2:1304578/140‑1 (MQ=255)
cGTCACGAACTCTAACCCGCAATCGGTCGCGATGGGGATTGGCCTGATTTTACTGCTGGGATTCACCTGTTACGCCTCACGCGGGCTGTGCTGGGCCTGCCCTGGCGAAGCGAGAACACCGTCTTACATTATGGGcacca < 2:568036/140‑1 (MQ=255)
cGTCACGAACTCTAACCCGCAATCGGTCGCGATGGGGATTGGCCTGATTTTACTGCTGGGATTCACCTGTTACGCCTCACGCGGGCTGTGCTGGGCCTGCCCTGGCGAAGCGAGAACACCGTCTTACATTATGGGcacca < 1:460775/140‑1 (MQ=255)
gTCACGAACTCTAACCCGCAATCGGTCGCGATGGGGATTGGCCTGATTTTACTGCTGGGATTCACCTGTTACGCCTCACGCGGGCTGTGCTGGGCCTGCCCTGGCGAAGCGAGAACACCGTCTTACATTATGGGcacca < 2:1365174/139‑1 (MQ=255)
gTCACGAACTCTAACCCGCAATCGGTCGCGATGGGGATTGGCCTGATTTTACTGCTGGGATTCACCTGTTACGCCTCACGCGGGCTGTGCTGGGCCTGCCCTGGCGAAGCGAGAACACCGTCTTACATTATGGGcacca > 1:1365174/1‑139 (MQ=255)
cACGAACTCTAACCCGCAATCGGTCGCGATGGGGATTGGCCTGATTTTACTGCTGGGATTCACCTGTTACGCCTCACGCGGGCTGTGCTGGGCCTGCCCTGGCGAAGCGAGAACACCGTCTTACATTATGGGCACCACgg < 2:973871/140‑1 (MQ=255)
cACGAACTCTAACCCGCAATCGGTCGCGATGGGGATTGGCCTGATTTTACTGCTGGGATTCACCTGTTACGCCTCACGCGGGCTGTGCTGGGCCTGCCCTGGCGAAGCGAGAACACCGTCTTACATTATGGGCACCACgg > 1:1134488/1‑140 (MQ=255)
aCGAACTCTAACCCGCAATCGGTCGCGATGGGGATTGGCCTGATTTTACTGCTGGGATTCACCTGTTACGCCTCACGCGGGCTGTGCTGGGCCTGCCCTGGCGAAGCGAGAACACCGTCTTACATTATGGGCACCACggt < 2:1622533/140‑1 (MQ=255)
aCGAACTCTAACCCGCAATCGGTCGCGATGGGGATTGGCCTGATTTTACTGCTGGGATTCACCTGTTACGCCTCACGCGGGCTGTGCTGGGCCTGCCCTGGCGAAGCGAGAACACCGTCTTACATTATGGGCACCACggt < 1:725821/140‑1 (MQ=255)
aCGAACTCTAACCCGCAATCGGTCGCGATGGGGATTGGCCTGATTTTACTGCTGGGATTCACCTGTTACGCCTCACGCGGGCTGTGCTGGGCCTGCCCTGGCGAAGCGAGAACACCGTCTTACATTATGGGCACCACggt < 2:551570/140‑1 (MQ=255)
cGAACTCTAACCCGCAATCGGTCGCGATGGGGATTGGCCTGATTTTACTGCTGGGATTCACCTGTTACGCCTCACGCGGGCTGTGCTGGGCCTGCCCTGGCGAAGCGAGAACACCGTCTTACATTATGGGCACCACggta < 2:1321042/140‑1 (MQ=255)
gAACTCTAACCCGCAATCGGTCGCGATGGGGATTGGCCTGATTTTACTGCTGGGATTCACCTGTTACGCCTCACGCGGGCTGTGCTGGGCCTGCCCTGGCGAAGCGAGAACACCGTCTTACATTATGGGCACCACggtag > 2:1342251/1‑140 (MQ=255)
tctAACCCGCAATCGGTCGCGATGGGGATTGGCCTGATTTTACTGCTGGGATTCACCTGTTACGCCTCACGCGGGCTGTGCTGGGCCTGCCCTGGCGAAGCGAGAACACCGTCTTACATTATGGGCACCACGGTAGGTAt < 2:1226646/140‑1 (MQ=255)
aaCCCGCAATCGGTCGCGATGGGGATTGGCCTGATTTTACTGCTGGGATTCACCTGTTACGCCTCACGCGGGCTGTGCTGGGCCTGCCCTGGCGAAGCGAGAACACCGTCTTACATTATGGGCACCACGGTAGGTATTTg > 1:501531/1‑140 (MQ=255)
cccGCAATCGGTCGCGATGGGGATTGGCCTGATTTTACTGCTGGGATTCACCTGTTACGCCTCACGCGGGCTGTGCTGGGCCTGCCCTGGCGAAGCGAGAACACCGTTTTACATTATGGGCACCACGGTAGGTATTTGtt < 1:885540/140‑1 (MQ=255)
cccGCAATCGGTCGCGATGGGGATTGGCCTGATTTTACTGCTGGGATTCACCTGTTACGCCTCACGCGGGCTGTGCTGGGCCTGCCCTGGCGAAGCGAGAACACCGTCTTACATTATGGGCACCACGGTAGGTATTTGtt < 1:1405545/140‑1 (MQ=255)
cGCAATCGGTCGCGATGGGGATTGGCCTGATTTTACTGCTGGGATTCACCTGTTACGCCTCACGCGGGCTGTGCTGGGCCTGCCCTGGCGAAGCGAGAACACCGTCTTACATTATGGGCACCACGGTAGGTATTTGTTCg > 2:95744/1‑140 (MQ=255)
cAATCGGTCGCGATGGGGATTGGCCTGATTTTACTGCTGGGATTCACCTGTTACGCCTCACGCGGGCTGTGCTGGGCCTGCCCTGGCGAAGCGAGAACACCGTCTTACATTATGGGCACCACGGTAGGTATTTGTTCgg < 1:1271658/139‑1 (MQ=255)
cAATCGGTCGCGATGGGGATTGGCCTGATTTTACTGCTGGGATTCACCTGTTACGCCTCACGCGGGCTGTGCTGGGCCTGCCCTGGCGAAGCGAGAACACCGTCTTACATTATGGGCACCACGGTAGGTATTTGTTCgg > 2:1271658/1‑139 (MQ=255)
cAATCGGTCGCGATGGGGATTGGCCTGATTTTACTGCTGGGATTCACCTGTTACGCCTCACGCGGGCTGTGCTGGGCCTGCCCTGGCGAAGCGAGAACACCGTCTTACATTATGGGCACCACGGTAGGTATTTGTTCGGt > 1:400950/1‑140 (MQ=255)
cAATCGGTCGCGATGGGGATTGGCCTGATTTTACTGCTGGGATTCACCTGTTACGCCTCACGCGGGCTGTGCTGGGCCTGCCCTGGCGAAGCGAGAACACCGTCTTACATTATGGGCACCACGGTAGGTATTTGTTCGGt < 2:29053/140‑1 (MQ=255)
aaTCGGTCGCGATGGGGATTGGCCTGATTTTACTGCTGGGATTCACCTGTTACGCCTCACGCGGGCTGTGCTGGGCCTGCCCTGGCGAAGCGAGAACACCGTCTTACATTATGGGCACCACGGTAGGTATTTGTTCGGTg > 2:504297/1‑140 (MQ=255)
tCGCGATGGGGATTGGCCTGATTTTACTGCTGGGATTCACCTGTTACGCCTCACGCGGGCTGTGCTGGGCCTGCCCTGGCGAAGCGAGAACACCGTCTTACATTATGGGCACCACGGTAGGTATTTGTTCGGTGATTGGa > 1:1182025/1‑140 (MQ=255)
tGGGGATTGGCCTGATTTTACTGCTGGGATTCACCTGTTACGCCTCACGCGGGCTGTGCTGGGCCTGCCCTGGCGAAGCGAGAACACCGTCTTACATTATGGGCACCACGGTAGGTATTTGTTCGGTGATTGGATTCCTg > 1:135794/1‑140 (MQ=255)
aTTGGCCTGATTTTACTGCTGGGATTCACCTGTTACGCCTCACGCGGGCTGTGCTGGGCCTGCCCTGGCGAAGCGAGAACACCGTCTTACATTATGGGCACCACGGTAGGTATTTGTTCGGTGATTGGATTCCTGCCGGa < 2:501531/140‑1 (MQ=255)
gCCTGATTTTACTGCTGGGATTCACCTGTTACGCCTCACGCGGGCTGTGCTGGGCCTGCCCTGGCGAAGCGAGAACACCGTCTTACATTATGGGCACCACGGTAGGTATTTGTTCGGTGATTGGATTCCTGCCGGATGTc < 2:1597817/140‑1 (MQ=255)
aTTTTACTGCTGGGATTCACCTGTTACGCCTCACGCGGGCTGTGCTGGGCCTGCCCTGGCGAAGCGAGAACACCGTCTTACATTATGGGCACCACGGTAGGTATTTGTTCGGTGATTGGATTCCTGCCGGATGTCTTCGt > 1:849725/1‑140 (MQ=255)
aTTTTACTGCTGGGATTCACCTGTTACGCCTCACGCGGGCTGTGCTGGGCCTGCCCTGGCGAAGCGAGAACACCGTCTTACATTATGGGCACCACGGTAGGTATTTGTTCGGTGATTGGATTCCTGCCGGATGTCTTCGt > 2:519647/1‑140 (MQ=255)
aTTTTACTGCTGGGATTCACCTGTTACGCCTCACGCGGGCTGTGCAGGGCCTGCCCTGGCGAAGCGAGAACACCGTCTTACATTATGGGCACCACGGTAGGTATTTGTTCGGTGATTGGATTCCTGCCGGATGTCTTCGt > 2:1175419/1‑140 (MQ=255)
ttttACTGCTGGGATTCACCTGTTACGCCTCACGCGGGCTGTGCTGGGCCTGCCCTGGCGAAGCGAGAACACCGTCTTACCTTATGGGCACCACGGTAGGTATTTGTTCGGTGATTGGATTCCTGCCGGATGTCTTCGtt < 2:1182025/140‑1 (MQ=255)
tttACTGCTGGGATTCACCTGTTACGCCTCACGCGGGCTGTGCTGGGCCTGCCCTGGCGAAGCGAGAACACCGTCTTACATTATGGGCACCACGGTAGGTATTTGTTCGGTGATTGGATTCCTGCCGGATGTCTTCGttt < 1:1378645/140‑1 (MQ=255)
aCTGCTGGGATTCACCTGTTACGCCTCACGCGGGCTGTGCTGGGCCTGCCCTGGCGAAGCGAGAACACCGTCTTACATTATGGGCACCACGGTAGGTATTTGTTCGGTGATTGGATTCCTGCCGGATGTCTTCGTTTAcc < 2:560480/140‑1 (MQ=255)
aCTGCTGGGATTCACCTGTTACGCCTCACGCGGGCTGTGCTGGGCCTGCCCTGGCGAAGCGAGAACACCGTCTTACATTATGGGCACCACGGTAGGTATTTGTTCGGTGATTGGATTCCTGCCGGATGTCTTCGTTTAcc < 1:1600555/140‑1 (MQ=255)
ctgctgGGATTCACCTGTTACGCCTCACGCGGGCTGTGCTGGGCCTGCCCTGGCGAAGCGAGAACACCGTCTTACATTATGGGCACCACGGTAGGTATTTGTTCGGTGATTGGATTCCTGCCGGATGTCTTCGTTTAccc > 2:152600/1‑140 (MQ=255)
gggATTCACCTGTTACGCCTCACGCGGGCTGTGCTGGGCCTGCCCTGGCGAAGCGAGAACACCGTCTTACATTATGGGCACCACGGTAGGTATTTGTTCGGTGATTGGATTCCTGCCGGATGTCTTCGTTTACCCAATTa > 2:328460/1‑140 (MQ=255)
cACCTGTTACGCCTCACGCGGGCTGTGCTGGGCCTGCCCTGGCGAAGCGAGAACACCGTCTTACATTATGGGCACCACGGTAGGTATTTGTTCGGTGATTGGATTCCTGCCGGATGTCTTCGTTTACCCAATTATCGGcc > 2:1711895/1‑140 (MQ=255)
ccTGTTACGCCTCACGCGGGCTGTGCTGGGCCTGCCCTGGCGAAGCGAGAACACCGTCTTACATTATGGGCACCACGGTAGGTATTTGTTCGGTGATTGGATTCCTGCCGGATGTCTTCGTTTACCCAATTATCGGCCAc < 2:1287806/140‑1 (MQ=255)
ccTGTTACGCCTCACGCGGGCTGTGCTGGGCCTGCCCTGGCGAAGCGAGAACACCGTCTTACATTATGGGCACCACGGTAGGTATTTGTTCGGTGATTGGATTCCTGCCGGATGTCTTCGTTTACCCAATTATCGGCCAc < 2:1317902/140‑1 (MQ=255)
ccTGTTACGCCTCACGCGGGCTGTGCTGGGCCTGCCCTGGCGAAGCGAGAACACCGTCTTACATTATGGGCACCACGGTAGGTATTTGTTCGGTGATTGGATTCCTGCCGGATGTCTTCGTTTACCCAATTATCGGCCAc < 1:812180/140‑1 (MQ=255)
ccTGTTACGCCTCACGCGGGCTGTGCTGGGCCTGCCCTGGCGAAGCGAGAACACCGTCTTACATTATGGGCACCACGGTAGGTATTTGTTCGGTGATTGGATTCCTGCCGGATGTCTTCGTTTACCCAATTATCGGCCAc < 1:152600/140‑1 (MQ=255)
cTGTTACGCCTCACGCGGGCTGTGCTGGGCCTGCCCTGGCGAAGCGAGAACACCGTCTTACATTATGGGCACCACGGTAGGTATTTGTTCGGTGATTGGATTCCTGCCGGATGTCTTCGTTTACCCAATTATCGGCCACt < 1:1278721/140‑1 (MQ=255)
tGTTACGCCTCACGCGGGCTGTGCTGGGCCTGCCCTGGCGAAGCGAGAACACCGTCTTACATTATGGGCACCACGGTAGGTATTTGTTCGGTGATTGGATTCCTGCCGGATGTCTTCGTTTACCCAATTATCGGCCACTg < 1:328460/140‑1 (MQ=255)
ttACGCCTCACGCGGGCTGTGCTGGGCCTGCCCTGGCGAAGCGAGAACACCGTCTTACATTATGGGCACCACGGTAGGTATTTGTTCGGTGATTGGATTCCTGCCGGATGTCTTCGTTTACCCAATTATCGGCCAc > 1:81653/1‑136 (MQ=255)
ttACGCCTCACGCGGGCTGTGCTGGGCCTGCCCTGGCGAAGCGAGAACACCGTCTTACATTATGGGCACCACGGTAGGTATTTGTTCGGTGATTGGATTCCTGCCGGATGTCTTCGTTTACCCAATTATCGGCCAc < 2:81653/136‑1 (MQ=255)
ttACGCCTCACGCGGGCTGTGCTGGGCCTGCCCTGGCGAAGCGAGAACACCGTCTTACATTATGGGCACCACGGTAGGTATTTGTTCGGTGATTGGATTCCTGCCGGATGTCTTCGTTTACCCAATTATCGGCCACTGGc > 1:158552/1‑140 (MQ=255)
tACGCCTCACGCGGGCTGTGCTGGGCCTGCCCTGGCGAAGCGAGAACACCGTCTTACATTATGGGCACCACGGTAGGTATTTGTTCGGTGATTGGATTCCTGCCGGATGTCTTCGTTTACCCAATTATCGGCCACTGGCa > 2:133970/1‑140 (MQ=255)
aCGCCTCACGCGGGCTGTGCTGGGCCTGCCCTGGCGAAGCGAGAACACCGTCTTACATTATGGGCACCACGGTAGGTATTTGTTCGGTGATTGGATTCCTGCCGGATGTCTTCGTTTACCCAATTATCGGCCACTGGCaa < 2:849725/140‑1 (MQ=255)
ccTCACGCGGGCTGTGCTGGGCCTGCCCTGGCGAAGCGAGAACACCGTCTTACATTATGGGCACCACGGTAGGTATTTGTTCGGTGATTGGATTCCTGCCGGATGTCTTCGTTTACCCAATTATCGGCCACTGGCAAGac > 2:972738/1‑140 (MQ=255)
ccTCACGCGGGCTGTGCTGGGCCTGCCCTGGCGAAGCGAGAACACCGTCTTACATTATGGGCACCACGGTAGGTATTTGTTCGGTGATTGGATTCCTGCCGGATGTCTTCGTTTACCCAATTATCGGCCACTGGCAAGac > 2:1669271/1‑140 (MQ=255)
cACGCGGGCTGTGCTGGGCCTGCCCTGGCGAAGCGAGAACACCGTCTTACATTATGGGCACCACGGTAGGTATTTGTTCGGTGATTGGATTCCTGCCGGATGTCTTCGTTTACCCAATTATCGGCCACTGGCAAGACAcc < 2:400950/140‑1 (MQ=255)
aCGCGGGCTGTGCTGGGCCTGCCCTGGCGAAGCGAGAACACCGTCTTACATTATGGGCACCACGGTAGGTATTTGTTCGGTGATTGGATTCCTGCCGGATGTCTTCGTTTACCCAATTATCGGCCACTGGCAAGACAccc > 2:1107652/1‑140 (MQ=255)
cgcgGGCTGTGCTGGGCCTGCCCTGGCGAAGCGAGAACACCGTCTTACATTATGGGCACCACGGTAGGTATTTGTTCGGTGATTGGATTCCTGCCGGATGTCTTCGTTTACCCAATTATCGGCCACTg < 1:1565894/128‑1 (MQ=255)
cgcgGGCTGTGCTGGGCCTGCCCTGGCGAAGCGAGAACACCGTCTTACATTATGGGCACCACGGTAGGTATTTGTTCGGTGATTGGATTCCTGCCGGATGTCTTCGTTTACCCAATTATCGGCCACTg > 2:1565894/1‑128 (MQ=255)
cgcgGGCTGTGCTGGGCCTGCCCTGGCGAAGCGAGAACACCGTCTTACATTATGGGCACCACGGTAGGTATTTGTTCGGTGATTGGATTCCTGCCGGATGTCTTCGTTTACCCAATTATCGGCCACTGGCAAGACACCCt > 2:84466/1‑140 (MQ=255)
cgcgGGCTGTGCTGGGCCTGCCCTGGCGAAGCGAGAACACCGTCTTACATTATGGGCACCACGGTAGGTATTTGTTCGGTGATTGGATTCCTGCCGGATGTCTTCGTTTACCCAATTATCGGCCACTGGCAAGACACCCt > 1:928654/1‑140 (MQ=255)
gggCTGTGCTGGGCCTGCCCTGGCGAAGCGAGAACACCGTCTTACATTATGGGCACCACGGTAGGTATTTGTTCGGTGATTGGATTCCTGCCGGATGTCTTCGTTTACCCAATTATCGGCCACTGGCAAGACACCCTGcc < 2:526368/140‑1 (MQ=255)
gggCTGTGCTGGGCCTGCCCTGGCGAAGCGAGAACACCGTCTTACATTATGGGCACCACGGTAGGTATTTGTTCGGTGATTGGATTCCTGCCGGATGTCTTCGTTTACCCAATTATCGGCCACTGGCAAGACACCCTGcc < 1:519647/140‑1 (MQ=255)
ggCTGTGCTGGGCCTGCCCTGGCGAAGCGAGAACACCGTCTTACATTATGGGCACCACGGTAGGTATTTGTTCGGTGATTGGATTCCTGCCGGATGTCTTCGTTTACCCAATTATCGGCCACTGGCAAGACACCCTGccc > 2:381142/1‑140 (MQ=255)
ggCTGTGCTGGGCCTGCCCTGGCGAAGCGAGAACACCGTCTTACATTATGGGCACCACGGTAGGTATTTGTTCGGTGATTGGATTCCTGCCGGATGTCTTCGTTTACCCAATTATCGGCCACTGGCAAGACACCCTGccc > 2:1687683/1‑140 (MQ=255)
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CAAATCCTTTCCGTACTCGGCCTGCTGACGTTAACTGCCCTGCTCGTCACGAACTCTAACCCGCAATCGGTCGCGATGGGGATTGGCCTGATTTTACTGCTGGGATTCACCTGTTACGCCTCACGCGGGCTGTACTGGGCCTGCCCTGGCGAAGCGAGAACACCGTCTTACATTATGGGCACCACGGTAGGTATTTGTTCGGTGATTGGATTCCTGCCGGATGTCTTCGTTTACCCAATTATCGGCCACTGGCAAGACACCCTGCCC > NC_000913/2901471‑2901737
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
